View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2206_low_18 (Length: 251)
Name: NF2206_low_18
Description: NF2206
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2206_low_18 |
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Alignment Details
Target: chr4 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 9 - 232
Target Start/End: Original strand, 38047290 - 38047513
Alignment:
| Q |
9 |
tgtcgaagaatatactttgcaacctctattttttagagaataaaattagaagaggagaaacatttaaaaaggaagggagtcaatatgnnnnnnnagtgaa |
108 |
Q |
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| T |
38047290 |
tgtcgatgtatatactttgcaacctctattttttagagaataaaattagaagaggagaaacatttaaaaaggaagggagtcaatatgtttttttagtgaa |
38047389 |
T |
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| Q |
109 |
gattctaattctatttctttaaattactgaattagtagtttagtacccacaagatatatataacaagaaatacaaacataaaacaaaagaaaagtttgtg |
208 |
Q |
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| T |
38047390 |
gattctaattctatttctttaaattactgaattagtagtttagtacccacaagatatatataacaagaaatacaaacataaaacaaaagaaaagtttgtg |
38047489 |
T |
|
| Q |
209 |
atgaacattaaggtggtattaatg |
232 |
Q |
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| T |
38047490 |
atgaacattaaggtggtattaatg |
38047513 |
T |
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