View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2209-Insertion-2 (Length: 1035)

Name: NF2209-Insertion-2
Description: NF2209
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2209-Insertion-2
NF2209-Insertion-2
[»] chr3 (53 HSPs)
chr3 (302-1024)||(45680911-45681656)
chr3 (8-236)||(45680619-45680845)
chr3 (501-714)||(14984400-14984611)
chr3 (565-708)||(34979083-34979226)
chr3 (572-686)||(5800218-5800332)
chr3 (607-714)||(1183118-1183225)
chr3 (625-859)||(30843655-30843889)
chr3 (605-695)||(12832193-12832283)
chr3 (552-713)||(23195624-23195785)
chr3 (562-714)||(36080575-36080727)
chr3 (570-706)||(47199870-47200006)
chr3 (638-708)||(3941674-3941744)
chr3 (505-666)||(26483034-26483193)
chr3 (563-736)||(53705831-53706004)
chr3 (559-703)||(14194835-14194979)
chr3 (759-883)||(22235185-22235309)
chr3 (561-718)||(22235239-22235396)
chr3 (508-617)||(30843802-30843910)
chr3 (575-681)||(27071248-27071354)
chr3 (778-859)||(1324511-1324592)
chr3 (561-618)||(40619187-40619244)
chr3 (603-720)||(51758636-51758753)
chr3 (758-826)||(51890006-51890075)
chr3 (590-682)||(8355045-8355136)
chr3 (589-859)||(26499800-26500070)
chr3 (558-618)||(43838820-43838880)
chr3 (607-686)||(20948260-20948338)
chr3 (778-865)||(40618888-40618975)
chr3 (561-628)||(40618925-40618992)
chr3 (625-720)||(43908716-43908811)
chr3 (759-853)||(4136535-4136629)
chr3 (552-622)||(12832082-12832152)
chr3 (625-703)||(24255318-24255396)
chr3 (559-631)||(26019827-26019896)
chr3 (778-828)||(47944335-47944385)
chr3 (797-843)||(47944572-47944618)
chr3 (759-859)||(5800176-5800277)
chr3 (607-667)||(20936466-20936526)
chr3 (552-620)||(21568528-21568596)
chr3 (561-620)||(1183004-1183063)
chr3 (561-620)||(38989781-38989840)
chr3 (758-828)||(43838806-43838877)
chr3 (609-696)||(46008625-46008712)
chr3 (555-614)||(47944329-47944388)
chr3 (756-818)||(50271455-50271518)
chr3 (602-697)||(54630829-54630924)
chr3 (804-842)||(2096340-2096378)
chr3 (805-859)||(17572033-17572087)
chr3 (805-859)||(29352329-29352383)
chr3 (559-620)||(3941806-3941867)
chr3 (638-703)||(26926727-26926792)
chr3 (637-714)||(40954453-40954530)
chr3 (778-882)||(41898026-41898128)
[»] chr8 (44 HSPs)
chr8 (590-780)||(21145450-21145640)
chr8 (559-859)||(42659853-42660154)
chr8 (552-699)||(18080363-18080510)
chr8 (558-714)||(33508583-33508739)
chr8 (530-705)||(17488103-17488277)
chr8 (552-714)||(7603936-7604098)
chr8 (552-682)||(21600445-21600575)
chr8 (559-718)||(13002947-13003105)
chr8 (561-707)||(34281386-34281532)
chr8 (561-708)||(6393834-6393981)
chr8 (559-861)||(10708372-10708667)
chr8 (558-703)||(6915423-6915572)
chr8 (565-714)||(21602074-21602226)
chr8 (559-696)||(2986930-2987066)
chr8 (607-684)||(30459929-30460006)
chr8 (552-668)||(7574578-7574694)
chr8 (788-859)||(41302652-41302723)
chr8 (563-688)||(24017953-24018078)
chr8 (778-865)||(4586765-4586852)
chr8 (530-645)||(14532389-14532503)
chr8 (577-684)||(15822989-15823096)
chr8 (570-688)||(16338261-16338379)
chr8 (559-657)||(31824258-31824356)
chr8 (559-708)||(14523735-14523884)
chr8 (552-684)||(3662359-3662491)
chr8 (572-704)||(8340125-8340256)
chr8 (778-865)||(28929529-28929615)
chr8 (561-652)||(42844884-42844975)
chr8 (797-863)||(6915538-6915603)
chr8 (552-682)||(7680943-7681073)
chr8 (779-881)||(21215897-21215999)
chr8 (778-828)||(41303155-41303205)
chr8 (559-696)||(41616691-41616828)
chr8 (552-681)||(41303083-41303214)
chr8 (794-857)||(10708631-10708694)
chr8 (530-616)||(4586772-4586857)
chr8 (793-859)||(14532438-14532504)
chr8 (805-855)||(29908923-29908973)
chr8 (622-684)||(34949105-34949167)
chr8 (559-597)||(36469577-36469615)
chr8 (778-819)||(13002958-13002999)
chr8 (797-842)||(16338357-16338402)
chr8 (616-681)||(31711398-31711463)
chr8 (625-682)||(36348859-36348916)
[»] chr4 (81 HSPs)
chr4 (552-708)||(48973310-48973466)
chr4 (535-714)||(17381451-17381629)
chr4 (552-819)||(8170760-8171024)
chr4 (552-681)||(13834370-13834499)
chr4 (561-714)||(971897-972048)
chr4 (561-860)||(4161642-4161937)
chr4 (590-714)||(40836712-40836836)
chr4 (561-681)||(51150892-51151012)
chr4 (561-718)||(12922218-12922376)
chr4 (789-859)||(13834524-13834594)
chr4 (563-720)||(52700886-52701043)
chr4 (560-668)||(8755911-8756019)
chr4 (561-681)||(38932751-38932870)
chr4 (552-681)||(45615718-45615848)
chr4 (579-714)||(14810246-14810381)
chr4 (560-688)||(3534150-3534278)
chr4 (638-730)||(9297480-9297572)
chr4 (535-735)||(11839795-11839994)
chr4 (791-859)||(27395666-27395734)
chr4 (560-708)||(30623493-30623641)
chr4 (797-865)||(32123791-32123858)
chr4 (607-695)||(51234383-51234471)
chr4 (561-676)||(9057306-9057421)
chr4 (609-660)||(36218699-36218750)
chr4 (562-657)||(37197542-37197637)
chr4 (758-880)||(40317747-40317870)
chr4 (758-880)||(40327821-40327944)
chr4 (565-695)||(27395474-27395604)
chr4 (569-707)||(29116293-29116431)
chr4 (552-717)||(924711-924876)
chr4 (778-839)||(7616957-7617018)
chr4 (552-681)||(32934074-32934203)
chr4 (773-838)||(39331164-39331229)
chr4 (778-859)||(45615623-45615704)
chr4 (561-617)||(11840032-11840088)
chr4 (530-614)||(20177282-20177365)
chr4 (568-684)||(33360873-33360989)
chr4 (565-620)||(29223408-29223463)
chr4 (559-686)||(31241039-31241166)
chr4 (561-699)||(33860214-33860355)
chr4 (778-861)||(35255467-35255550)
chr4 (561-620)||(40317759-40317818)
chr4 (561-620)||(40327833-40327892)
chr4 (767-841)||(46804794-46804869)
chr4 (607-702)||(46804930-46805025)
chr4 (530-620)||(4215162-4215251)
chr4 (758-859)||(32934123-32934225)
chr4 (778-843)||(971882-971947)
chr4 (559-616)||(30623708-30623765)
chr4 (778-859)||(40407642-40407722)
chr4 (555-620)||(40836892-40836957)
chr4 (552-686)||(46216984-46217119)
chr4 (552-681)||(56095063-56095192)
chr4 (778-859)||(56095205-56095286)
chr4 (805-865)||(1758497-1758557)
chr4 (552-684)||(24806661-24806792)
chr4 (797-861)||(30623732-30623796)
chr4 (756-859)||(33360835-33360939)
chr4 (535-615)||(35255463-35255542)
chr4 (531-667)||(46433529-46433664)
chr4 (552-620)||(46804798-46804866)
chr4 (559-614)||(2350919-2350974)
chr4 (758-880)||(12034382-12034505)
chr4 (797-828)||(25855289-25855320)
chr4 (778-829)||(31241259-31241310)
chr4 (759-861)||(35075640-35075743)
chr4 (507-582)||(51151053-51151128)
chr4 (758-828)||(56095072-56095143)
chr4 (758-859)||(13834348-13834450)
chr4 (758-859)||(42375216-42375318)
chr4 (797-859)||(46805039-46805101)
chr4 (637-682)||(7616899-7616944)
chr4 (552-617)||(7616951-7617016)
chr4 (607-708)||(8678013-8678114)
chr4 (564-617)||(14810440-14810493)
chr4 (801-842)||(22467236-22467277)
chr4 (559-616)||(25855265-25855322)
chr4 (638-679)||(36409656-36409697)
chr4 (638-679)||(36423822-36423863)
chr4 (787-859)||(46871546-46871616)
chr4 (797-865)||(51151043-51151112)
[»] chr1 (48 HSPs)
chr1 (559-714)||(6541056-6541209)
chr1 (561-714)||(51273342-51273495)
chr1 (609-855)||(34826822-34827068)
chr1 (559-859)||(5529627-5529926)
chr1 (552-714)||(38267312-38267474)
chr1 (552-618)||(27900662-27900728)
chr1 (564-714)||(32743231-32743381)
chr1 (590-719)||(7151895-7152023)
chr1 (552-620)||(29795255-29795323)
chr1 (506-701)||(8234048-8234241)
chr1 (561-720)||(33747321-33747480)
chr1 (797-880)||(39162406-39162489)
chr1 (640-865)||(19464230-19464456)
chr1 (570-656)||(34177444-34177530)
chr1 (794-879)||(35621581-35621666)
chr1 (552-708)||(2998922-2999078)
chr1 (557-681)||(8983971-8984095)
chr1 (535-686)||(10018730-10018879)
chr1 (625-687)||(12238437-12238499)
chr1 (559-728)||(38445059-38445225)
chr1 (787-859)||(50155532-50155603)
chr1 (561-728)||(26515123-26515289)
chr1 (759-865)||(27900887-27900994)
chr1 (607-702)||(36144963-36145058)
chr1 (805-859)||(2998900-2998954)
chr1 (670-780)||(9776902-9777012)
chr1 (789-858)||(18894615-18894684)
chr1 (552-673)||(30050536-30050657)
chr1 (559-616)||(46187336-46187393)
chr1 (588-681)||(49880163-49880256)
chr1 (795-880)||(50804266-50804351)
chr1 (557-617)||(29795099-29795159)
chr1 (588-667)||(9777054-9777133)
chr1 (802-853)||(39162634-39162685)
chr1 (562-684)||(39330130-39330253)
chr1 (565-619)||(6541267-6541321)
chr1 (561-619)||(37980405-37980463)
chr1 (797-843)||(38445192-38445238)
chr1 (603-673)||(38901645-38901715)
chr1 (575-656)||(3728097-3728178)
chr1 (778-859)||(8068977-8069057)
chr1 (759-859)||(8679270-8679370)
chr1 (577-634)||(8791688-8791745)
chr1 (552-617)||(14926327-14926392)
chr1 (587-660)||(31134679-31134752)
chr1 (797-882)||(36144783-36144868)
chr1 (602-679)||(50155711-50155788)
chr1 (788-845)||(52361935-52361992)
[»] chr6 (36 HSPs)
chr6 (552-728)||(10067607-10067784)
chr6 (554-696)||(31315202-31315343)
chr6 (535-692)||(9436663-9436819)
chr6 (552-880)||(515770-516098)
chr6 (560-705)||(9762523-9762668)
chr6 (559-714)||(21020998-21021149)
chr6 (607-728)||(16431544-16431665)
chr6 (558-677)||(25085023-25085142)
chr6 (756-880)||(33806650-33806775)
chr6 (561-696)||(33551003-33551139)
chr6 (508-714)||(10219537-10219737)
chr6 (758-880)||(10067704-10067827)
chr6 (778-865)||(19264726-19264812)
chr6 (625-703)||(3711309-3711387)
chr6 (558-684)||(6699438-6699563)
chr6 (602-839)||(31142009-31142247)
chr6 (589-684)||(34937509-34937604)
chr6 (561-651)||(4964252-4964342)
chr6 (576-652)||(7515596-7515672)
chr6 (756-828)||(31315264-31315336)
chr6 (758-880)||(10219537-10219660)
chr6 (530-617)||(19264720-19264805)
chr6 (504-614)||(25084899-25085008)
chr6 (611-688)||(3314725-3314801)
chr6 (561-690)||(9307389-9307517)
chr6 (787-828)||(12291644-12291685)
chr6 (603-684)||(29927654-29927735)
chr6 (778-882)||(20565776-20565879)
chr6 (565-652)||(12278223-12278310)
chr6 (639-714)||(23887621-23887696)
chr6 (638-681)||(26293485-26293528)
chr6 (569-708)||(34205188-34205327)
chr6 (561-599)||(22260415-22260453)
chr6 (613-699)||(24285079-24285165)
chr6 (758-859)||(25085068-25085170)
chr6 (758-846)||(28995518-28995606)
[»] chr5 (59 HSPs)
chr5 (560-656)||(33598295-33598391)
chr5 (561-705)||(14468821-14468962)
chr5 (588-859)||(27001195-27001471)
chr5 (561-686)||(917087-917212)
chr5 (552-859)||(26675047-26675354)
chr5 (552-859)||(26946655-26946962)
chr5 (559-819)||(8206088-8206349)
chr5 (561-713)||(463181-463332)
chr5 (625-713)||(3709306-3709394)
chr5 (533-668)||(13200581-13200715)
chr5 (641-728)||(14460039-14460126)
chr5 (570-708)||(12403204-12403342)
chr5 (607-730)||(7313982-7314105)
chr5 (584-666)||(2707656-2707737)
chr5 (623-689)||(8814174-8814240)
chr5 (758-843)||(42420512-42420597)
chr5 (550-618)||(8407193-8407261)
chr5 (604-708)||(18970157-18970260)
chr5 (804-880)||(27769982-27770058)
chr5 (758-828)||(11534949-11535020)
chr5 (561-664)||(23159081-23159184)
chr5 (561-620)||(29686478-29686537)
chr5 (561-619)||(22579500-22579558)
chr5 (552-714)||(29686593-29686755)
chr5 (588-681)||(9023352-9023445)
chr5 (552-681)||(11534900-11535029)
chr5 (552-617)||(17676571-17676636)
chr5 (561-686)||(32517871-32517996)
chr5 (559-688)||(37181242-37181370)
chr5 (577-654)||(39194868-39194945)
chr5 (573-682)||(42525535-42525644)
chr5 (788-828)||(917172-917212)
chr5 (755-827)||(9572679-9572751)
chr5 (559-631)||(16750273-16750345)
chr5 (569-620)||(8206087-8206138)
chr5 (758-828)||(11498009-11498080)
chr5 (758-828)||(11505365-11505436)
chr5 (758-828)||(11512759-11512830)
chr5 (758-828)||(11520135-11520206)
chr5 (758-828)||(11527543-11527614)
chr5 (508-595)||(16127050-16127136)
chr5 (797-880)||(16127050-16127133)
chr5 (574-629)||(16722878-16722933)
chr5 (611-714)||(18919846-18919949)
chr5 (561-668)||(32270593-32270700)
chr5 (602-663)||(4400732-4400794)
chr5 (603-657)||(4658409-4658463)
chr5 (778-880)||(14461776-14461878)
chr5 (758-843)||(22579487-22579573)
chr5 (530-620)||(27001381-27001470)
chr5 (766-851)||(31949271-31949357)
chr5 (558-686)||(3599844-3599973)
chr5 (756-828)||(3599847-3599920)
chr5 (758-878)||(7756655-7756776)
chr5 (561-682)||(9607333-9607454)
chr5 (552-681)||(11497960-11498089)
chr5 (797-858)||(19342539-19342600)
chr5 (561-618)||(27554313-27554370)
chr5 (552-617)||(31949278-31949343)
[»] scaffold0687 (1 HSPs)
scaffold0687 (552-714)||(1620-1782)
[»] chr2 (44 HSPs)
chr2 (508-708)||(40124264-40124463)
chr2 (561-707)||(1517592-1517736)
chr2 (559-714)||(19206403-19206558)
chr2 (579-714)||(21603481-21603616)
chr2 (552-681)||(7165606-7165736)
chr2 (552-686)||(29926689-29926822)
chr2 (559-688)||(12676431-12676560)
chr2 (788-861)||(7165760-7165833)
chr2 (554-714)||(15301488-15301647)
chr2 (535-682)||(17604256-17604400)
chr2 (561-720)||(30256196-30256355)
chr2 (758-865)||(15301570-15301677)
chr2 (758-880)||(6788469-6788592)
chr2 (565-718)||(2687047-2687209)
chr2 (755-865)||(14441086-14441197)
chr2 (625-696)||(42657850-42657921)
chr2 (607-681)||(41746424-41746498)
chr2 (562-599)||(6923757-6923794)
chr2 (562-599)||(28779733-28779770)
chr2 (562-679)||(43191794-43191911)
chr2 (530-618)||(7165743-7165830)
chr2 (638-714)||(13242544-13242620)
chr2 (567-619)||(20966212-20966264)
chr2 (552-620)||(34883941-34884009)
chr2 (797-865)||(40124279-40124347)
chr2 (759-841)||(12676420-12676503)
chr2 (535-674)||(18903110-18903248)
chr2 (625-684)||(39002934-39002993)
chr2 (808-859)||(39273385-39273436)
chr2 (804-879)||(43503032-43503107)
chr2 (603-665)||(10880718-10880779)
chr2 (638-676)||(11281471-11281509)
chr2 (638-688)||(15816904-15816954)
chr2 (565-615)||(28779821-28779871)
chr2 (797-838)||(1517582-1517623)
chr2 (616-681)||(4877058-4877123)
chr2 (622-683)||(8940069-8940130)
chr2 (762-838)||(19206489-19206566)
chr2 (778-819)||(20966220-20966261)
chr2 (564-617)||(21603675-21603728)
chr2 (781-861)||(28779698-28779779)
chr2 (640-713)||(33584700-33584773)
chr2 (599-644)||(39496917-39496962)
chr2 (778-819)||(43191802-43191843)
[»] chr7 (44 HSPs)
chr7 (553-708)||(5362288-5362443)
chr7 (605-716)||(32188121-32188232)
chr7 (559-705)||(27376273-27376418)
chr7 (570-707)||(40354978-40355115)
chr7 (530-702)||(34703651-34703821)
chr7 (561-699)||(10228752-10228890)
chr7 (638-728)||(26905106-26905196)
chr7 (552-714)||(39608358-39608520)
chr7 (588-689)||(46719847-46719948)
chr7 (579-707)||(12927643-12927771)
chr7 (561-701)||(32996289-32996429)
chr7 (569-657)||(38838525-38838613)
chr7 (758-848)||(46720000-46720091)
chr7 (788-865)||(8062884-8062961)
chr7 (778-859)||(38838650-38838731)
chr7 (625-714)||(49078119-49078208)
chr7 (778-846)||(8929485-8929553)
chr7 (772-859)||(12849715-12849803)
chr7 (552-651)||(14239779-14239878)
chr7 (759-849)||(24488273-24488364)
chr7 (628-702)||(3116914-3116988)
chr7 (570-839)||(23457610-23457880)
chr7 (561-631)||(23474559-23474629)
chr7 (797-882)||(5358205-5358290)
chr7 (552-617)||(14669495-14669560)
chr7 (782-859)||(25688976-25689053)
chr7 (607-716)||(29778695-29778804)
chr7 (758-882)||(39608564-39608689)
chr7 (624-839)||(23474548-23474764)
chr7 (561-677)||(27080808-27080923)
chr7 (561-677)||(27197378-27197493)
chr7 (761-827)||(3117046-3117113)
chr7 (561-616)||(5358259-5358314)
chr7 (561-616)||(23457814-23457869)
chr7 (609-675)||(24325440-24325507)
chr7 (559-645)||(24488292-24488378)
chr7 (552-618)||(32996499-32996565)
chr7 (802-855)||(1247523-1247576)
chr7 (798-855)||(5362460-5362517)
chr7 (758-810)||(21401957-21402010)
chr7 (559-616)||(37502217-37502274)
chr7 (778-859)||(38838487-38838567)
chr7 (798-847)||(39791858-39791907)
chr7 (663-708)||(42336998-42337043)
[»] scaffold0003 (5 HSPs)
scaffold0003 (561-827)||(89061-89326)
scaffold0003 (577-843)||(109075-109340)
scaffold0003 (798-880)||(328765-328847)
scaffold0003 (561-620)||(104385-104444)
scaffold0003 (552-685)||(328808-328941)
[»] scaffold0002 (1 HSPs)
scaffold0002 (579-714)||(349097-349232)
[»] scaffold0045 (1 HSPs)
scaffold0045 (588-708)||(20614-20733)
[»] scaffold0005 (2 HSPs)
scaffold0005 (579-714)||(29347-29482)
scaffold0005 (564-617)||(29235-29288)
[»] scaffold0102 (1 HSPs)
scaffold0102 (565-688)||(27099-27218)
[»] scaffold0211 (1 HSPs)
scaffold0211 (588-681)||(20063-20156)
[»] scaffold0050 (1 HSPs)
scaffold0050 (778-880)||(81295-81397)


Alignment Details
Target: chr3 (Bit Score: 524; Significance: 0; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 524; E-Value: 0
Query Start/End: Original strand, 302 - 1024
Target Start/End: Original strand, 45680911 - 45681656
Alignment:
Q  302 tagcggaattatt-attttctttgatatcataatacatttagatttatatagtcaattatatgaactagctcataactggtctaactaagatgtaactat 400  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  45680911 tagcggaattatttattttctttgatatcataatacatttagatttatatagtcaattaaataaactagctcataactggtctaactaagatgtaactat 45681010  T
Q  401 ctcaaataaatgttatgaaataatttggtggagcactagggtgggaaaacaatataaatacccttaaaatatttctaaaacacgttaaaacattttaaat 500  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  45681011 ctcaaataaatgttatgaaataatttggtggagcactagggtgggaaaacaatataaatacccttaaaatatttctaaaacaatttaaaacattttaaat 45681110  T
Q  501 tttgagataa---tagtcattttggttctcttatgtttaacgagtagtctcaattagtctcttaatgtatcaaaattttaaaatactccttgattgtgca 597  Q
    ||||||||||   |||||||||||||||  ||||||||||||||||||||||| |||||||| ||||||||||||||| |||||| |||||||||||||     
T  45681111 tttgagataataatagtcattttggttcatttatgtttaacgagtagtctcaaatagtctctcaatgtatcaaaatttcaaaatagtccttgattgtgcg 45681210  T
Q  598 ctatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctcaatatacgtacttattgtcatatcagtcattataaa 697  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||||||    
T  45681211 ctatattaatcaaaatagtctcttatgttaaaatgtttctttaatattatcatattagtcccccaatttacgtatttattgtcatatcagtcattataaa 45681310  T
Q  698 tacttacttatcgtcatatcaattcatatataagaagagctaacgtcggcattgagttaatattttaacgtcagagactatttgactagcaaagtgtata 797  Q
    ||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||    
T  45681311 tacttacttattgtcatatcaattcatatataagaagtgcaaacgtcggcattgagttaatattttaacgtgagagactatttgactagcaaagtgcata 45681410  T
Q  798 atcaaagactattttaaaatttcaatacatttaaagactattgtg-------attactcattacacatttaaggaataaaaggactattatcaggtttta 890  Q
    ||||| |||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||| |||||    
T  45681411 atcaaggactattttaaaatttcaatacatttaaagactattgtgattactcattactcattacacatttaaggaataaaaggactattatcagatttta 45681510  T
Q  891 taatctaaataggaagcctgaga-tgaatatggtgc--aaagaaattgtcaaattggaaagaaacattatatgctgagta-tttctaga---agaaaatg 983  Q
    ||||||||||||||||||||||| | |||| |||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||   | ||||||    
T  45681511 taatctaaataggaagcctgagattaaatagggtgcgaaaagaaattgtcaaattggaaagaaacattatatgctgagtattttctagaaagaaaaaatg 45681610  T
Q  984 aagtttgagcc--aga---tgtttctagaggaaacccaaagttgtt 1024  Q
    |||||||||||  |||   | ||| |||||||||||||||||||||    
T  45681611 aagtttgagcccaagattgtttttttagaggaaacccaaagttgtt 45681656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 200; E-Value: 1e-108
Query Start/End: Original strand, 8 - 236
Target Start/End: Original strand, 45680619 - 45680845
Alignment:
Q  8 gaaagttggatcccacattgcaccttttgttgattcttttcttcatgcaagcaaggaacgccacaaagagagcgcaaatgctagcactgtatagcacaag 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  45680619 gaaagttggatcccacattgcaccttttgttgattcttttcttcatgcaagcaaagaacgccacaaagagagcgcaaatgctagcactgtatagcacaag 45680718  T
Q  108 gaacaacatcatttgcccaggcttc-tggtgctgaatgaaacacaaccatttcttagtttcttcaactgaatcaagtagtaacccatttaggttgttatc 206  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||    
T  45680719 gaacaacatcatttgcccaggcttcttggtgctgaatgaaacacaaccatttcttagtttcttcaactgaatcaagtagtaacccatttag---gttatc 45680815  T
Q  207 aacttatcatgaagaaacaaacataagtat 236  Q
    ||||||||||||||||||||||| ||||||    
T  45680816 aacttatcatgaagaaacaaacaaaagtat 45680845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 501 - 714
Target Start/End: Original strand, 14984400 - 14984611
Alignment:
Q  501 tttgagataatagtcattttggttctcttatgtttaacgagtagtctcaattagtctcttaatgtatcaaaattttaaaatactccttgattgtgcacta 600  Q
    |||| |||||||||||||||||| ||   |||| |||||||||||| |||| |||| || ||| |||| |||||| |||||||||| ||||||||||||     
T  14984400 tttgggataatagtcattttggtcctga-atgtgtaacgagtagtcacaat-agtccctcaatatatcgaaatttcaaaatactccctgattgtgcactt 14984497  T
Q  601 tattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctcaatatacgtacttattgtcatatcagtcattataaatac 700  Q
      ||| ||||||||||  || | |||||||| |||| |||||||| |||||||| ||| ||||||||| | ||||||||||||| |||| || ||| |||    
T  14984498 cgttagtcaaaatagttcctgacattaaaatatttcgttaatattgtcatattaatccttcaatatacttgcttattgtcatatgagtccttttaagtac 14984597  T
Q  701 ttacttatcgtcat 714  Q
    ||| |||| |||||    
T  14984598 ttatttattgtcat 14984611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 565 - 708
Target Start/End: Complemental strand, 34979226 - 34979083
Alignment:
Q  565 tatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctcaat 664  Q
    |||| ||||||||||||| |  || |||||||| | | ||| |||||||||||||| | |||||||| |||| ||||||||||||||||||||  |||||    
T  34979226 tatcgaaattttaaaatagtttttaattgtgcattttgttagtcaaaatagtctctcacattaaaatatttcgttaatattatcatattagtcattcaat 34979127  T
Q  665 atacgtacttattgtcatatcagtcattataaatacttacttat 708  Q
    |||| ||||||||||||||||| || ||||||||| | ||||||    
T  34979126 atacttacttattgtcatatcaatcgttataaatattcacttat 34979083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 572 - 686
Target Start/End: Original strand, 5800218 - 5800332
Alignment:
Q  572 attttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctcaatatacgta 671  Q
    ||||||||||| ||||| ||| ||| |||||||| |||||||||||||||| |||||||||||| ||||||||| ||||||||||| |||  | ||| ||    
T  5800218 attttaaaatagtccttaattatgcgctatattagtcaaaatagtctcttacattaaaatgtttgtttaatattgtcatattagtctctccgtgtactta 5800317  T
Q  672 cttattgtcatatca 686  Q
     ||||||||||||||    
T  5800318 tttattgtcatatca 5800332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 607 - 714
Target Start/End: Complemental strand, 1183225 - 1183118
Alignment:
Q  607 tcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctcaatatacgtacttattgtcatatcagtcattataaatacttactt 706  Q
    |||||||||||| | |||||||||| ||||  ||||||| |||||| ||||  |||||||| ||||||||||||||||||||| |||||| |||||||||    
T  1183225 tcaaaatagtctttgatattaaaatatttcactaatattgtcatatcagtcattcaatatatgtacttattgtcatatcagtccttataagtacttactt 1183126  T
Q  707 atcgtcat 714  Q
    || |||||    
T  1183125 attgtcat 1183118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 625 - 859
Target Start/End: Original strand, 30843655 - 30843889
Alignment:
Q  625 ttaaaatgtttctttaatattatcatattagtccctcaatatacgtacttattgtcatatcagtcattataaatacttacttatcgtcatatcaattcat 724  Q
    |||||||| ||| |||||||| |||||||||||  ||||||||| || ||||||||||||||||| |||||| ||| || |||| ||||| | | | | |    
T  30843655 ttaaaatgcttcattaatattgtcatattagtctttcaatatacttatttattgtcatatcagtccttataagtac-taattattgtcattttagtcctt 30843753  T
Q  725 atataagaagagctaacgtcggcattgagttaatattttaacgtcagagacta-tttgactagcaaagtgtataatcaaagactattttaaaatttcaat 823  Q
    |||| | || |  ||  ||  ||||||||  | ||||||| |||||| ||||| ||||| || ||||||| | ||||| ||||||||||  |||||  ||    
T  30843754 atatgaaaaaacttattgtgagcattgagagattattttagcgtcagggactattttgattaacaaagtgcacaatcagagactattttggaattttgat 30843853  T
Q  824 acatttaaagactattgtgattactcattacacatt 859  Q
    ||||| | |||||||||||| |||||||||||||||    
T  30843854 acattaagagactattgtgactactcattacacatt 30843889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 605 - 695
Target Start/End: Complemental strand, 12832283 - 12832193
Alignment:
Q  605 aatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctcaatatacgtacttattgtcatatcagtcattata 695  Q
    |||||||||||||||||||||||||||| ||| |||||||| |||||| ||||| |||||||||  ||||||| |||| |||||| |||||    
T  12832283 aatcaaaatagtctcttatattaaaatgcttcattaatattgtcatataagtccttcaatatactaacttattttcatgtcagtccttata 12832193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 552 - 713
Target Start/End: Complemental strand, 23195785 - 23195624
Alignment:
Q  552 tagtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcata 651  Q
    |||||| | ||||||| |||||||||||||| |   |||||||||| |  |||| |  ||||||||| | | |||||| | |||| |||||||| |||||    
T  23195785 tagtctttcaatgtattaaaattttaaaataatttctgattgtgcatttcattagttcaaatagtctatgacattaaagtatttcgttaatattgtcata 23195686  T
Q  652 ttagtccctcaatatacgtacttattgtcatatcagtcattataaatacttacttatcgtca 713  Q
    ||||||  ||||||||| || ||||||||||||||||| || |||||| |||||||| ||||    
T  23195685 ttagtctttcaatatacttaattattgtcatatcagtccttttaaatatttacttattgtca 23195624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 562 - 714
Target Start/End: Original strand, 36080575 - 36080727
Alignment:
Q  562 atgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctc 661  Q
    |||||||||||||| |||||| ||| ||||||| |||| | ||| |||  ||||||||| ||||||||||||||| |||||||| || ||||| | | ||    
T  36080575 atgtatcaaaatttcaaaataatccctgattgttcactttgttagtcatcatagtctctaatattaaaatgtttcattaatattgtcgtattaattcttc 36080674  T
Q  662 aatatacgtacttattgtcatatcagtcattataaatacttacttatcgtcat 714  Q
    | ||||  ||||| ||||||||||| || ||||||| | ||| |||| |||||    
T  36080675 agtatatttacttgttgtcatatcaatccttataaacagttatttattgtcat 36080727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 570 - 706
Target Start/End: Complemental strand, 47200006 - 47199870
Alignment:
Q  570 aaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctcaatatacg 669  Q
    |||||| |||||| || ||||| || |||| | ||| |||||||||| ||  ||||||||||| ||| ||||||||||||||| | ||  ||||||||      
T  47200006 aaatttcaaaatagtcattgatcgtacactttgttagtcaaaatagtttccgatattaaaatgcttcattaatattatcatatcaatcattcaatatatt 47199907  T
Q  670 tacttattgtcatatcagtcattataaatacttactt 706  Q
    |||||||| ||||||||||| ||| ||||||||||||    
T  47199906 tacttattatcatatcagtccttacaaatacttactt 47199870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 638 - 708
Target Start/End: Original strand, 3941674 - 3941744
Alignment:
Q  638 ttaatattatcatattagtccctcaatatacgtacttattgtcatatcagtcattataaatacttacttat 708  Q
    |||||||| |||||||||||| ||||||||| |||||||| ||||||||||| ||||| ||||||||||||    
T  3941674 ttaatattgtcatattagtccttcaatatacctacttattatcatatcagtcgttatatatacttacttat 3941744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 505 - 666
Target Start/End: Original strand, 26483034 - 26483193
Alignment:
Q  505 agataatagtcattttggttctcttatgtttaacgagtagtctcaattagtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatatt 604  Q
    ||||||||||||||||||| ||   |||| |||||||||| | |||| ||||  |||||||||||||||| ||||||| |  |||||| |||| |  |||    
T  26483034 agataatagtcattttggtccttagatgtataacgagtagacacaat-agtcatttaatgtatcaaaattctaaaatagtttttgattatgcattccatt 26483132  T
Q  605 aatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctcaatat 666  Q
    | |||||||||||| ||   ||||||| ||| |||||||  |||||||||||||||||||||    
T  26483133 a-tcaaaatagtctattgcgttaaaatatttttttaataccatcatattagtccctcaatat 26483193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 563 - 736
Target Start/End: Complemental strand, 53706004 - 53705831
Alignment:
Q  563 tgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctca 662  Q
    |||||| |||||| |||||| ||| | |||||||||| | | | |||||||| |||||   ||||||||  ||  |||||||| ||||||||||   |||    
T  53706004 tgtatcgaaatttcaaaatagtccataattgtgcactttgtcagtcaaaataatctctcgcattaaaatactttgttaatattgtcatattagttattca 53705905  T
Q  663 atatacgtacttattgtcatatcagtcattataaatacttacttatcgtcatatcaattcatatataagaagag 736  Q
    |||||| ||||||| ||  |||||||| |||||||||||||||||  ||||| ||||| | ||||||| |||||    
T  53705904 atatacttacttatcgttgtatcagtccttataaatacttacttaatgtcatttcaatccctatataaaaagag 53705831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 559 - 703
Target Start/End: Complemental strand, 14194979 - 14194835
Alignment:
Q  559 ttaatgtatcaaaattttaaaatactccttgattgtgcactatattaa-tcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtc 657  Q
    ||||||||||||||||| |||||| ||| | ||| |||||| | |||| |||| ||||||||| ||||||||||  ||| |||||||| |||||| ||||    
T  14194979 ttaatgtatcaaaatttcaaaatagtccattattatgcact-tcttaagtcaatatagtctctgatattaaaatacttcattaatattgtcatatcagtc 14194881  T
Q  658 cctcaatatacgtacttattgtcatatcagtcattataaatactta 703  Q
      | ||||||| || |||||||| ||||||||  ||||| ||||||    
T  14194880 atttaatatacttagttattgtcgtatcagtccctataagtactta 14194835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 759 - 883
Target Start/End: Complemental strand, 22235309 - 22235185
Alignment:
Q  759 attttaacgtcagagactattt-gactagcaaagtgtataatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcattacaca 857  Q
    |||||||||| ||||||||||| ||||| | ||||||| |||||  ||||||||| |||||| |||||||| || ||||||||||  || | ||||||||    
T  22235309 attttaacgtgagagactattttgactaacgaagtgtacaatcagcgactattttgaaattttaatacattcaaggactattgtggctatttattacaca 22235210  T
Q  858 tttaaggaataaaaggactattatca 883  Q
    ||| ||||  |||| |||||||||||    
T  22235209 ttt-aggacaaaaatgactattatca 22235185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 561 - 718
Target Start/End: Original strand, 22235239 - 22235396
Alignment:
Q  561 aatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccct 660  Q
    ||||||| ||||||| |||||| ||  ||||||| ||||   ||| |||||||||||||| |  ||||||||||   |||||| ||||||||||||||||    
T  22235239 aatgtattaaaatttcaaaatagtcgctgattgtacacttcgttagtcaaaatagtctctcacgttaaaatgttctattaatactatcatattagtccct 22235338  T
Q  661 caatatacgtacttattgtcatatcagtcattataaatacttacttatcgtcatatca 718  Q
    |||||||  |||||| | |||||||  || |||||| ||  |||||||  ||||||||    
T  22235339 caatatatatacttactatcatatcgatccttataagtatctacttattctcatatca 22235396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 508 - 617
Target Start/End: Complemental strand, 30843910 - 30843802
Alignment:
Q  508 taatagtcattttggttctcttatgtttaacgagtagtctcaattagtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaat 607  Q
    ||||||||| ||||||||    |||| ||| |||||||| |||| ||||||||||||||||||||||  |||||| ||  |||||||||||| | |||||    
T  30843910 taatagtcactttggttcctgaatgtgtaatgagtagtcacaat-agtctcttaatgtatcaaaattccaaaatagtctctgattgtgcactttgttaat 30843812  T
Q  608 caaaatagtc 617  Q
    ||||||||||    
T  30843811 caaaatagtc 30843802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 575 - 681
Target Start/End: Original strand, 27071248 - 27071354
Alignment:
Q  575 ttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctcaatatacgtactt 674  Q
    |||||||| || ||||| ||| | ||| ||| |||||||||||||||| ||||||||| ||| | |||||| |||||| |||||| |||||||  |||||    
T  27071248 ttaaaatagtctttgatagtgaattatgttagtcaaaatagtctcttacattaaaatgattcgtcaatattgtcatatcagtcccacaatatatttactt 27071347  T
Q  675 attgtca 681  Q
    | |||||    
T  27071348 aatgtca 27071354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 778 - 859
Target Start/End: Complemental strand, 1324592 - 1324511
Alignment:
Q  778 tttgactagcaaagtgtataatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcattacacatt 859  Q
    |||| ||| ||||||| |||||||  ||||||||||||||||  ||||||  || || ||||||||||||||||||||||||    
T  1324592 tttgcctatcaaagtgcataatcattgactattttaaaattttgatacatcgaaggattattgtgattactcattacacatt 1324511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 561 - 618
Target Start/End: Complemental strand, 40619244 - 40619187
Alignment:
Q  561 aatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtct 618  Q
    |||||||||||||||||||||| ||  |||||||||||||| ||| ||||||||||||    
T  40619244 aatgtatcaaaattttaaaatagtctctgattgtgcactatgttattcaaaatagtct 40619187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 603 - 720
Target Start/End: Complemental strand, 51758753 - 51758636
Alignment:
Q  603 ttaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctcaatatacgtacttattgtcatatcagtcattataaatactt 702  Q
    ||||||||||||||||||||  |||| ||||| | |||||||||| | || || |||| |||| || || ||||| |||||| ||||||| ||| || ||    
T  51758753 ttaatcaaaatagtctcttacgttaatatgttacgttaatattattacatgagcccctgaatacacttatttattttcatattagtcattgtaagtattt 51758654  T
Q  703 acttatcgtcatatcaat 720  Q
    | |||| |||||||||||    
T  51758653 aattattgtcatatcaat 51758636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 758 - 826
Target Start/End: Original strand, 51890006 - 51890075
Alignment:
Q  758 tattttaacgtcagagactattt-gactagcaaagtgtataatcaaagactattttaaaatttcaataca 826  Q
    |||||||| ||| |||||||||| |||||||||||| |||||||| |||||||||| ||| |||||||||    
T  51890006 tattttaatgtcggagactattttgactagcaaagtatataatcagagactattttgaaaattcaataca 51890075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 590 - 682
Target Start/End: Complemental strand, 8355136 - 8355045
Alignment:
Q  590 attgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctcaatatacgtacttattgtcat 682  Q
    |||||||||| | ||||||||||||| |||| || ||||||||||||  || |||| |||||| ||||| |||||||| ||||||||| ||||    
T  8355136 attgtgcactttgttaatcaaaatagactctgattttaaaatgtttc-atagtattgtcatatcagtccttcaatataagtacttattttcat 8355045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 589 - 859
Target Start/End: Original strand, 26499800 - 26500070
Alignment:
Q  589 gattgtgcactatattaatcaaaatagtctctt-atattaaaatgtttctttaatattatcatattagtccctcaatatacgtacttattgtcatatcag 687  Q
    ||||||||||| | ||| ||||| ||| ||||| ||||| ||||  ||| |||||||| |||||| ||||  ||||||||| || ||||| |||||||||    
T  26499800 gattgtgcactttgttagtcaaactag-ctcttgatattgaaatacttcattaatattttcatatcagtcattcaatatacttatttattatcatatcag 26499898  T
Q  688 tcattataaatacttacttatcgtcatatcaattcatatataagaagagctaacgtcggcattgagttaatattttaacgtcagagacta-tttgactag 786  Q
    || || ||| |||||||||||  |||| ||| | | ||||||| ||||| ||  ||  | ||||||  | ||||||| |||||  ||||| ||||||||     
T  26499899 tccttctaagtacttacttattatcatttcagtccctatataa-aagagttatggtgagtattgagaaattattttagcgtcaaggactattttgactaa 26499997  T
Q  787 caaagtgtataatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcattacacatt 859  Q
     | |||| ||||| | ||||| ||||||||||| |||||||| | | |||||| | | |||| ||||||||||    
T  26499998 aagagtgcataattatagacttttttaaaattttaatacattaagaaactattttaactactaattacacatt 26500070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 558 - 618
Target Start/End: Complemental strand, 43838880 - 43838820
Alignment:
Q  558 cttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtct 618  Q
    ||||||||||||||||||||||||| || ||||||||||| | | ||| ||||||||||||    
T  43838880 cttaatgtatcaaaattttaaaatagtcattgattgtgcattttgttagtcaaaatagtct 43838820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 607 - 686
Target Start/End: Original strand, 20948260 - 20948338
Alignment:
Q  607 tcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctcaatatacgtacttattgtcatatca 686  Q
    |||||| | ||||| ||||||||||||| | ||||||||||||||| ||| | ||||||||| || ||||||||||||||    
T  20948260 tcaaaaaaatctctgatattaaaatgtt-cattaatattatcatatcagttcttcaatatacttatttattgtcatatca 20948338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 778 - 865
Target Start/End: Complemental strand, 40618975 - 40618888
Alignment:
Q  778 tttgactagcaaagtgtataatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcattacacatttaagga 865  Q
    |||||||| |||| || | |||||| || |||||||||||||  |||||||| ||||||||||||| || |||||||| ||| |||||    
T  40618975 tttgactaacaaattgcacaatcaaggattattttaaaattttcatacatttgaagactattgtgactagtcattacatattcaagga 40618888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 561 - 628
Target Start/End: Original strand, 40618925 - 40618992
Alignment:
Q  561 aatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaa 628  Q
    ||||||| |||||||||||||| |||||||||||||| | | ||| |||||||||| ||| |||||||    
T  40618925 aatgtatgaaaattttaaaataatccttgattgtgcaatttgttagtcaaaatagtatctgatattaa 40618992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 625 - 720
Target Start/End: Original strand, 43908716 - 43908811
Alignment:
Q  625 ttaaaatgtttctttaatattatcatattagtccctcaatatacgtacttattgtcatatcagtcattataaatacttacttatcgtcatatcaat 720  Q
    |||||| | ||| ||||||||||||||||||||  ||||||||  ||  |||| ||||||||||| |||||| |||||| |||| ||||| |||||    
T  43908716 ttaaaaagcttcattaatattatcatattagtcaatcaatatatttatatattatcatatcagtctttataagtacttatttattgtcatttcaat 43908811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 759 - 853
Target Start/End: Complemental strand, 4136629 - 4136535
Alignment:
Q  759 attttaacgtcagagactatttgactagcaaagtgtataatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcatta 853  Q
    |||||||||| |||||| |||||| || |||| | | |||||| | ||||||||||||||| |||| ||| |||||||||| ||  |||||||||    
T  4136629 attttaacgtaagagacaatttgattaacaaactttgtaatcagatactattttaaaattttaatatattgaaagactattatggctactcatta 4136535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 552 - 622
Target Start/End: Original strand, 12832082 - 12832152
Alignment:
Q  552 tagtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctctta 622  Q
    ||||| |||||||||||||| |||||||||| ||| |  ||||||||| | ||| ||||||||||||||||    
T  12832082 tagtcccttaatgtatcaaagttttaaaatagtccctagttgtgcactctcttagtcaaaatagtctctta 12832152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 625 - 703
Target Start/End: Original strand, 24255318 - 24255396
Alignment:
Q  625 ttaaaatgtttctttaatattatcatattagtccctcaatatacgtacttattgtcatatcagtcattataaatactta 703  Q
    ||||||||| |  ||||||||||||||||||| | ||||||| | || |||||||||||||| ||  ||||||||||||    
T  24255318 ttaaaatgtcttgttaatattatcatattagttcatcaatatgcttatttattgtcatatcaatctctataaatactta 24255396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 559 - 631
Target Start/End: Complemental strand, 26019896 - 26019827
Alignment:
Q  559 ttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaat 631  Q
    ||||| |||||||||||||||||| ||| ||||||||||||   | | |||||||||||||| ||||||||||    
T  26019896 ttaatatatcaaaattttaaaataatccctgattgtgcact---tcagtcaaaatagtctctgatattaaaat 26019827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 778 - 828
Target Start/End: Complemental strand, 47944385 - 47944335
Alignment:
Q  778 tttgactagcaaagtgtataatcaaagactattttaaaatttcaatacatt 828  Q
    |||||||| ||||||| | |||||||||||||||||||||||| |||||||    
T  47944385 tttgactaacaaagtgcacaatcaaagactattttaaaatttcgatacatt 47944335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 797 - 843
Target Start/End: Original strand, 47944572 - 47944618
Alignment:
Q  797 aatcaaagactattttaaaatttcaatacatttaaagactattgtga 843  Q
    |||||||||||||||||||||||||||||||| || ||| |||||||    
T  47944572 aatcaaagactattttaaaatttcaatacattcaaggacaattgtga 47944618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 759 - 859
Target Start/End: Complemental strand, 5800277 - 5800176
Alignment:
Q  759 attttaacgtcagagactattt-gactagcaaagtgtataatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcattacaca 857  Q
    ||||||| || ||||||||||| |||||  | || | ||||| || |||||||||||||| |||||| ||| ||  |||||||||| |||||||||||||    
T  5800277 attttaatgtaagagactattttgactaatatagcgcataattaaggactattttaaaatatcaatatattgaagaactattgtgactactcattacaca 5800178  T
Q  858 tt 859  Q
    ||    
T  5800177 tt 5800176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 607 - 667
Target Start/End: Complemental strand, 20936526 - 20936466
Alignment:
Q  607 tcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctcaatata 667  Q
    |||||||||| ||| ||||||||||||||| |||||||| |||||| | ||| ||||||||    
T  20936526 tcaaaatagtttctgatattaaaatgtttcattaatattgtcatatcaatccttcaatata 20936466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 552 - 620
Target Start/End: Complemental strand, 21568596 - 21568528
Alignment:
Q  552 tagtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctct 620  Q
    |||||||  |||||||||||| ||||||||| || ||||| ||||||| | ||| ||||||||||||||    
T  21568596 tagtctcccaatgtatcaaaaatttaaaatagtctttgatagtgcactctgttattcaaaatagtctct 21568528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 561 - 620
Target Start/End: Original strand, 1183004 - 1183063
Alignment:
Q  561 aatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctct 620  Q
    ||||||| ||| ||||||| || |||||||||||||||| | ||| ||||||||||||||    
T  1183004 aatgtataaaagttttaaagtagtccttgattgtgcactttgttagtcaaaatagtctct 1183063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 561 - 620
Target Start/End: Original strand, 38989781 - 38989840
Alignment:
Q  561 aatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctct 620  Q
    |||||||||||||||||||||| ||| ||||| |||| ||| ||  ||||||||||||||    
T  38989781 aatgtatcaaaattttaaaatagtccgtgattatgcattatgttcgtcaaaatagtctct 38989840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 758 - 828
Target Start/End: Original strand, 43838806 - 43838877
Alignment:
Q  758 tattttaacgtcagagactattt-gactagcaaagtgtataatcaaagactattttaaaatttcaatacatt 828  Q
    ||||||||||||| ||||||||| ||||| |||| || | |||||| ||||||||||||||||  |||||||    
T  43838806 tattttaacgtcaaagactattttgactaacaaaatgcacaatcaatgactattttaaaattttgatacatt 43838877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 609 - 696
Target Start/End: Original strand, 46008625 - 46008712
Alignment:
Q  609 aaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctcaatatacgtacttattgtcatatcagtcattataa 696  Q
    |||||||||| | | ||||||||  ||| |||||||| |||||||| ||  | ||||||| || |||||||||||||||| |||||||    
T  46008625 aaaatagtctttaacattaaaataattcgttaatattgtcatattaatcttttaatatacttatttattgtcatatcagttattataa 46008712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 555 - 614
Target Start/End: Original strand, 47944329 - 47944388
Alignment:
Q  555 tctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaata 614  Q
    ||||| |||||||| ||||||||||||| || ||||||||||||| | ||| ||||||||    
T  47944329 tctctgaatgtatcgaaattttaaaatagtctttgattgtgcactttgttagtcaaaata 47944388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 756 - 818
Target Start/End: Complemental strand, 50271518 - 50271455
Alignment:
Q  756 aatattttaacgtcagagactattt-gactagcaaagtgtataatcaaagactattttaaaatt 818  Q
    ||||||||||||||||||| ||||| ||||| ||||||||| ||  | ||||||||||||||||    
T  50271518 aatattttaacgtcagagattatttcgactaacaaagtgtacaaatagagactattttaaaatt 50271455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 602 - 697
Target Start/End: Original strand, 54630829 - 54630924
Alignment:
Q  602 attaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctcaatatacgtacttattgtcatatcagtcattataaa 697  Q
    |||||||||||||||||||   |||||||  |||||||||||  ||||||| | | | ||||||||| ||||||||| ||||| | | ||||||||    
T  54630829 attaatcaaaatagtctctcgcattaaaaaatttctttaatacgatcatatcaattcttcaatatacttacttattgacatattatttattataaa 54630924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 804 - 842
Target Start/End: Original strand, 2096340 - 2096378
Alignment:
Q  804 gactattttaaaatttcaatacatttaaagactattgtg 842  Q
    |||||||||| |||||||||||||||||||| |||||||    
T  2096340 gactattttagaatttcaatacatttaaagattattgtg 2096378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 805 - 859
Target Start/End: Original strand, 17572033 - 17572087
Alignment:
Q  805 actattttaaaatttcaatacatttaaagactattgtgattactcattacacatt 859  Q
    ||||||||| ||||| |||||||| ||  ||||||||||||| ||||||||||||    
T  17572033 actattttagaattttaatacattgaagaactattgtgattaatcattacacatt 17572087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 805 - 859
Target Start/End: Complemental strand, 29352383 - 29352329
Alignment:
Q  805 actattttaaaatttcaatacatttaaagactattgtgattactcattacacatt 859  Q
    ||||||||| |||||||||||||| ||||| ||||||| |||||| || ||||||    
T  29352383 actattttagaatttcaatacattgaaagattattgtgtttactctttgcacatt 29352329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 559 - 620
Target Start/End: Complemental strand, 3941867 - 3941806
Alignment:
Q  559 ttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctct 620  Q
    |||||||||||||||||||||||| ||||| ||||  || | | ||| ||||||||||||||    
T  3941867 ttaatgtatcaaaattttaaaatagtccttaattgaacattttgttagtcaaaatagtctct 3941806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 638 - 703
Target Start/End: Original strand, 26926727 - 26926792
Alignment:
Q  638 ttaatattatcatattagtccctcaatatacgtacttattgtcatatcagtcattataaatactta 703  Q
    |||||||||||| |||||| | |||||| || |||||| |||||||||| ||  ||||||||||||    
T  26926727 ttaatattatcacattagttcttcaatagacttacttagtgtcatatcaatccatataaatactta 26926792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 637 - 714
Target Start/End: Complemental strand, 40954530 - 40954453
Alignment:
Q  637 tttaatattatcatattagtccctcaatatacgtacttattgtcatatcagtcattataaatacttacttatcgtcat 714  Q
    ||||||||| ||||||||||   ||||||||| ||||||||||||||| | || |||| | || |||||||| |||||    
T  40954530 tttaatattgtcatattagtgtttcaatatacttacttattgtcatattaatccttatgagtagttacttattgtcat 40954453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 778 - 882
Target Start/End: Original strand, 41898026 - 41898128
Alignment:
Q  778 tttgactagcaaagtgtataatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcattacacatttaaggaataaaaggacta 877  Q
    ||||| || ||||||| | |||||||||||  | | |||||| | ||||||  ||||||||||||||||||| ||||||||| |||||  ||||  ||||    
T  41898026 tttgattaacaaagtgcaaaatcaaagact--tgtgaaattttagtacattgtaagactattgtgattactcgttacacattcaaggaccaaaataacta 41898123  T
Q  878 ttatc 882  Q
    |||||    
T  41898124 ttatc 41898128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 91; Significance: 1e-43; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 590 - 780
Target Start/End: Original strand, 21145450 - 21145640
Alignment:
Q  590 attgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctcaatatacgtacttattgtcatatcagtc 689  Q
    |||||||||||| ||| ||||||||||||||||  |||||||||||| |||||||||||||||||||| |||||||||| |||||| |||||||||||||    
T  21145450 attgtgcactatgttagtcaaaatagtctcttacgttaaaatgtttcgttaatattatcatattagtctctcaatatacttacttactgtcatatcagtc 21145549  T
Q  690 attataaatacttacttatcgtcatatcaattcatatataagaagagctaacgtcggcattgagttaatattttaacgtcagagactattt 780  Q
     |||||| |||||||| |  ||| ||||| | | ||||||| ||||| ||| ||| ||||||||  | ||||||||| |||||||||||||    
T  21145550 cttataagtacttactcactgtcctatcagtccctatataaaaagagttaatgtcagcattgagggactattttaacatcagagactattt 21145640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 559 - 859
Target Start/End: Original strand, 42659853 - 42660154
Alignment:
Q  559 ttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtcc 658  Q
    ||||||||| ||| |||||||||| |  ||||||||||| |  |||| ||||| | |||| | ||||||||||||||| | |||||| |||||||||||     
T  42659853 ttaatgtataaaatttttaaaataatttttgattgtgcaatccattagtcaaagttgtctttgatattaaaatgtttcatcaatattgtcatattagtca 42659952  T
Q  659 ctcaatatacgtacttattgtcatatcagtcattataaatacttacttatcgtcatatcaattcatatataagaagagctaacgtcggcattgagttaat 758  Q
     ||||||||| |||||||||||| ||||||| ||||||  |||||||||| ||||| | ||| | ||||| | ||||  ||  ||  |||||||     |    
T  42659953 ttcaatatacttacttattgtcacatcagtccttataagcacttacttattgtcattttaatccttatatgaaaagaattattgtgagcattgaaaggtt 42660052  T
Q  759 attttaacgtcagagacta-tttgactagcaaagtgtataatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcattacaca 857  Q
    |||| | ||||| | |||| ||||||||  | |||| ||||||||||||||||||||||| | |||||||| | |||||||| ||| |||| || |||||    
T  42660053 atttgagcgtcaaatactattttgactacgagagtgcataatcaaagactattttaaaatcttaatacattaagagactattctgactacttatgacaca 42660152  T
Q  858 tt 859  Q
    ||    
T  42660153 tt 42660154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 552 - 699
Target Start/End: Complemental strand, 18080510 - 18080363
Alignment:
Q  552 tagtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcata 651  Q
    |||||||||||||||||||||||| |||||| |  ||||||||||||||| ||| | |||||||||  ||| | ||||||| ||| |||||||| |||||    
T  18080510 tagtctcttaatgtatcaaaatttcaaaatattttttgattgtgcactatgttattgaaaatagtcctttaaaataaaatgattcgttaatattgtcata 18080411  T
Q  652 ttagtccctcaatatacgtacttattgtcatatcagtcattataaata 699  Q
    ||| ||||||||||| | |||||||| |||||||| ||  ||||||||    
T  18080410 ttaatccctcaatatgcttacttattatcatatcaatccatataaata 18080363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 558 - 714
Target Start/End: Complemental strand, 33508739 - 33508583
Alignment:
Q  558 cttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtc 657  Q
    ||||||||||| |||||| |||||| |  |||| |||||| |  ||||||||||||| ||||| | ||||||||  ||| ||||||||||| ||||||||    
T  33508739 cttaatgtatcgaaatttcaaaatagttattgagtgtgcatttcattaatcaaaataatctctgacattaaaatacttcattaatattatcgtattagtc 33508640  T
Q  658 cctcaatatacgtacttattgtcatatcagtcattataaatacttacttatcgtcat 714  Q
    | ||||||||| |||||||| | |||||||| ||||||  ||||||||||| |||||    
T  33508639 cttcaatatacttacttattattatatcagttattatatgtacttacttattgtcat 33508583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 530 - 705
Target Start/End: Complemental strand, 17488277 - 17488103
Alignment:
Q  530 atgtttaacgagtagtctcaattagtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaa 629  Q
    |||| |||| ||||||| |||| |||| || |||||| | |||||| |||||| |||||||||||| | ||| ||  ||||||||| |  |||| |||||    
T  17488277 atgtgtaacaagtagtcacaat-agtccctcaatgtagcgaaatttcaaaatagtccttgattgtgaattatgttggtcaaaatagccatttatgttaaa 17488179  T
Q  630 atgtttctttaatattatcatattagtccctcaatatacgtacttattgtcatatcagtcattataaatacttact 705  Q
    ||||||| |||||||  |||||||||||||||||||||| ||||||||  ||||||||||  ||||| ||||||||    
T  17488178 atgtttcgttaatatcgtcatattagtccctcaatatacttacttattaccatatcagtccctataagtacttact 17488103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 552 - 714
Target Start/End: Original strand, 7603936 - 7604098
Alignment:
Q  552 tagtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcata 651  Q
    |||||| | |||||||||||||||||||||| |  |||||||||||||   ||  |||||||||||||| ||||| |||||| || |||||||| |||||    
T  7603936 tagtctttcaatgtatcaaaattttaaaataatttttgattgtgcacttcgttggtcaaaatagtctctaatattgaaatgtctcattaatattgtcata 7604035  T
Q  652 ttagtccctcaatatacgtacttattgtcatatcagtcattataaatacttacttatcgtcat 714  Q
    ||| ||  ||||||||  ||||||||||||||  |||| ||||| ||| |||||||| |||||    
T  7604036 ttaatctttcaatatatttacttattgtcatactagtctttatatatatttacttattgtcat 7604098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 552 - 682
Target Start/End: Original strand, 21600445 - 21600575
Alignment:
Q  552 tagtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcata 651  Q
    ||||| ||||||||||||||||||||||||| || ||||||||||| |   ||||| ||| ||||| || || ||||||| |||| |||||||| |||||    
T  21600445 tagtcccttaatgtatcaaaattttaaaatagtcattgattgtgcatttcgttaataaaattagtcactgatgttaaaatatttcattaatattgtcata 21600544  T
Q  652 ttagtccctcaatatacgtacttattgtcat 682  Q
    || |||| ||||||||| |||||||||||||    
T  21600545 tttgtccttcaatatacttacttattgtcat 21600575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 559 - 718
Target Start/End: Original strand, 13002947 - 13003105
Alignment:
Q  559 ttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtcc 658  Q
    ||||| || ||||||||||||||| || |||||| |||||||| ||| ||||||| || ||||| ||||||||||| | |||||||| | |||||| |||    
T  13002947 ttaatataacaaaattttaaaatagtctttgattatgcactatgttagtcaaaattgtttcttacattaaaatgttgcattaatattgttatattaatcc 13003046  T
Q  659 ctcaatatacgtacttattgtcatatcagtcattataaatacttacttatcgtcatatca 718  Q
    || ||| ||| ||||||||||||||| ||||  |  || ||||||||||| |||||||||    
T  13003047 cttaatgtacttacttattgtcatattagtctatgcaagtacttacttat-gtcatatca 13003105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 561 - 707
Target Start/End: Original strand, 34281386 - 34281532
Alignment:
Q  561 aatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccct 660  Q
    |||||| ||||||||||||||| ||||||||| |||||||| ||| |||||||| |||||||   |||||||| |   ||||||| |||||||||||| |    
T  34281386 aatgtaccaaaattttaaaatagtccttgattatgcactatgttagtcaaaataatctcttacgctaaaatgtcttgctaatattgtcatattagtccat 34281485  T
Q  661 caatatacgtacttattgtcatatcagtcattataaatacttactta 707  Q
    | |||||| ||  |||| |||||||||||  ||||| ||||||||||    
T  34281486 cgatatacttatctattatcatatcagtctctataagtacttactta 34281532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 561 - 708
Target Start/End: Original strand, 6393834 - 6393981
Alignment:
Q  561 aatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccct 660  Q
    |||||||| |||||| |||||| | | |||||||||||| ||||| ||||||||||  || | ||||||||  ||||||||||||||||||||||| | |    
T  6393834 aatgtatcgaaatttcaaaatagttcatgattgtgcactttattagtcaaaatagttcctaacattaaaatagttctttaatattatcatattagttctt 6393933  T
Q  661 caatatacgtacttattgtcatatcagtcattataaatacttacttat 708  Q
    |||||||| ||| ||||||  ||| || | |||||| |||||| ||||    
T  6393934 caatatacttacatattgttgtatgagactttataagtacttagttat 6393981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 559 - 861
Target Start/End: Complemental strand, 10708667 - 10708372
Alignment:
Q  559 ttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtcc 658  Q
    |||||||||  ||||||||||||| || |||||| |  | ||| ||| |||||||| || | ||  ||||||| |||  |||||||||| |||||||| |    
T  10708667 ttaatgtatataaattttaaaatagtctttgattatatattatgttagtcaaaataatcacctacgttaaaatattttgttaatattattatattagttc 10708568  T
Q  659 ctcaatatacgtacttattgtcatatcagtcattataaatacttacttatcgtcatatcaattcatatataagaagagctaacgtcggcattgagttaat 758  Q
    |||||||||| || ||||| ||| ||| |||||||||| |||||| | |   |||||||||| | ||||||| ||| | ||| ||||| |||||   | |    
T  10708567 ctcaatatacttaattattatcacatcggtcattataagtacttattaacaatcatatcaatccctatataaaaagggttaatgtcggtattgaaaaact 10708468  T
Q  759 attttaacgtcagagacta-tttgactagcaaagtgtataatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcattacaca 857  Q
    |||||||||||| |||||| |||||||| | | ||| ||        ||||||||| |||||  ||||||| ||||||||||||| |||||  |||||||    
T  10708467 attttaacgtcaaagactattttgactaacgaggtgcat--------actattttagaattttcatacattgaaagactattgtggttacttgttacaca 10708376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 558 - 703
Target Start/End: Complemental strand, 6915572 - 6915423
Alignment:
Q  558 cttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatat----tatcatatt 653  Q
    ||||||||||||||||||||||||| |  ||||||||||| ||| ||||||||||||||   |||  |||||||||||   ||||||    |||||||||    
T  6915572 cttaatgtatcaaaattttaaaataatttttgattgtgcattatgttaatcaaaatagttctttacgttaaaatgttttgataatattatctatcatatt 6915473  T
Q  654 agtccctcaatatacgtacttattgtcatatcagtcattataaatactta 703  Q
     |||| ||||||||  |||||||| |||||| ||||| ||||| ||||||    
T  6915472 tgtccatcaatatatttacttattatcatataagtcactataagtactta 6915423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 565 - 714
Target Start/End: Complemental strand, 21602226 - 21602074
Alignment:
Q  565 tatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctcaat 664  Q
    |||| |||||| |||||| |||  ||||| |||||  |||||||||||||||| || | ||||||||  ||| |||||||| |||||||||||| |||||    
T  21602226 tatcgaaatttcaaaatagtccccgattgcgcacttcattaatcaaaatagtccctgacattaaaataattcgttaatattgtcatattagtccttcaat 21602127  T
Q  665 atacgtacttattgtcatatcagtc---attataaatacttacttatcgtcat 714  Q
    ||||  ||||||||| ||||| |||   ||||||| || |||||||| |||||    
T  21602126 atactaacttattgttatatccgtccttattataagtatttacttattgtcat 21602074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 559 - 696
Target Start/End: Original strand, 2986930 - 2987066
Alignment:
Q  559 ttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtcc 658  Q
    |||||| ||||||||||||||||| |   |||| ||||| | | ||| |||||||||| | | || |||||||||||| |||||| |||||||||||||     
T  2986930 ttaatgcatcaaaattttaaaatagtttatgat-gtgcattttgttagtcaaaatagtatttaatgttaaaatgtttcattaatactatcatattagtct 2987028  T
Q  659 ctcaatatacgtacttattgtcatatcagtcattataa 696  Q
     ||||||||| ||||||||||||||  |||| ||||||    
T  2987029 ttcaatatacttacttattgtcatactagtccttataa 2987066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 607 - 684
Target Start/End: Original strand, 30459929 - 30460006
Alignment:
Q  607 tcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctcaatatacgtacttattgtcatat 684  Q
    ||||||||||| ||||| |||||||||||  |||||||| | ||||| |||||||||||||| |||||||||||||||    
T  30459929 tcaaaatagtcccttatgttaaaatgttttcttaatattttaatatttgtccctcaatatacttacttattgtcatat 30460006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 552 - 668
Target Start/End: Complemental strand, 7574694 - 7574578
Alignment:
Q  552 tagtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcata 651  Q
    |||||||| || |||||  ||| |||||||| || ||||||||||||||| ||| |||||||||| || ||| |||||||| ||  |||||||| |||||    
T  7574694 tagtctctcaacgtatcgtaatattaaaatagtcgttgattgtgcactatgttattcaaaatagtttcctatgttaaaatgctttgttaatattgtcata 7574595  T
Q  652 ttagtccctcaatatac 668  Q
    || || |||||||||||    
T  7574594 ttggtacctcaatatac 7574578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 788 - 859
Target Start/End: Complemental strand, 41302723 - 41302652
Alignment:
Q  788 aaagtgtataatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcattacacatt 859  Q
    |||||| | ||||| ||||||||||||||||| ||||| || |||||||||||||||||||| |||||||||    
T  41302723 aaagtgcaaaatcatagactattttaaaattttaatactttgaaagactattgtgattactcgttacacatt 41302652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 563 - 688
Target Start/End: Original strand, 24017953 - 24018078
Alignment:
Q  563 tgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctca 662  Q
    |||||| |||||| |||||| || ||  |||||| |||| ||| | ||| || ||  |||||||||||| |||| |||||||| |||||||||||  |||    
T  24017953 tgtatcgaaatttgaaaatagtcattctttgtgctctatgttagtaaaagtattcatttatattaaaatatttcgttaatattgtcatattagtcattca 24018052  T
Q  663 atatacgtacttattgtcatatcagt 688  Q
    |||||| |||| ||||||||||||||    
T  24018053 atatacatactaattgtcatatcagt 24018078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 778 - 865
Target Start/End: Complemental strand, 4586852 - 4586765
Alignment:
Q  778 tttgactagcaaagtgtataatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcattacacatttaagga 865  Q
    |||||||| | ||||| | ||||| ||||||||||||||||| |||||||| | |||||||||| | ||||| ||||||||| |||||    
T  4586852 tttgactaacgaagtgcaaaatcatagactattttaaaattttaatacattaagagactattgtaactactcgttacacattcaagga 4586765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 530 - 645
Target Start/End: Complemental strand, 14532503 - 14532389
Alignment:
Q  530 atgtttaacgagtagtctcaattagtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaa 629  Q
    |||| ||| |||||||| |||| ||||||||||| |||||||||||||||||| ||||| ||| | |  |||||||| ||||||||||| |||  |||||    
T  14532503 atgtgtaatgagtagtcacaat-agtctcttaatatatcaaaattttaaaataatccttaattatacgttatattaaccaaaatagtcttttacgttaaa 14532405  T
Q  630 atgtttctttaatatt 645  Q
    || | || ||||||||    
T  14532404 atatgtcattaatatt 14532389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 577 - 684
Target Start/End: Complemental strand, 15823096 - 15822989
Alignment:
Q  577 aaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctcaatatacgtacttat 676  Q
    |||||| ||||| |||||||||| | ||||||||||||||   |||| ||||||| || | ||||||||||||||| | || |||||||||| ||||||     
T  15823096 aaaatagtccttaattgtgcactttgttaatcaaaatagttctttatcttaaaatcttccattaatattatcatatcattctctcaatatacttacttac 15822997  T
Q  677 tgtcatat 684  Q
    | ||||||    
T  15822996 tttcatat 15822989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 570 - 688
Target Start/End: Complemental strand, 16338379 - 16338261
Alignment:
Q  570 aaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctcaatatacg 669  Q
    |||||| ||| || || ||||||||||  ||| ||| | ||||||| | ||||  |||||||| ||  |||||||| ||||||| |||| |||||||||     
T  16338379 aaatttcaaagtagtctttgattgtgcgttatgttagttaaaatagccgcttaggttaaaatgctttgttaatattgtcatatttgtccatcaatatact 16338280  T
Q  670 tacttattgtcatatcagt 688  Q
    |||||||||||||||||||    
T  16338279 tacttattgtcatatcagt 16338261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 559 - 657
Target Start/End: Complemental strand, 31824356 - 31824258
Alignment:
Q  559 ttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtc 657  Q
    ||||| |||||||||||||||||| |  ||| ||||    ||||||| |||||||||||| |||||||||||||| ||  ||||||| |||||||||||    
T  31824356 ttaatatatcaaaattttaaaataatatttgtttgtatgttatattagtcaaaatagtcttttatattaaaatgtctcaataatattgtcatattagtc 31824258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 559 - 708
Target Start/End: Original strand, 14523735 - 14523884
Alignment:
Q  559 ttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtcc 658  Q
    ||||| |||||||||||||||||  |  || ||||| |||||| ||| | |||||  |||||||  |||||||||||  ||| |||| | ||||||||||    
T  14523735 ttaatatatcaaaattttaaaatgatatttaattgtacactatgttatttaaaatgttctcttacgttaaaatgttttattagtattgttatattagtcc 14523834  T
Q  659 ctcaatatacgtacttattgtcatatcagtcattataaatacttacttat 708  Q
    |||||||| | || | ||| || ||| || | ||||||||||||||||||    
T  14523835 ctcaatatgcttattcattatcgtattagactttataaatacttacttat 14523884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 552 - 684
Target Start/End: Original strand, 3662359 - 3662491
Alignment:
Q  552 tagtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcata 651  Q
    ||||| || |||||||||||||||||||||| | |||||||||||||  |  |  ||||| ||||| ||   ||||||||  ||  |||||||| |||||    
T  3662359 tagtccctcaatgtatcaaaattttaaaatagttcttgattgtgcacattgcttgtcaaattagtccctagcattaaaataatttgttaatattgtcata 3662458  T
Q  652 ttagtccctcaatatacgtacttattgtcatat 684  Q
    ||||| | | ||||||| |||||||||||||||    
T  3662459 ttagttctttaatatacttacttattgtcatat 3662491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 572 - 704
Target Start/End: Original strand, 8340125 - 8340256
Alignment:
Q  572 attttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctcaatatacgta 671  Q
    ||||||||||| |  ||||||||||||||| ||| |||| ||||||| |||  ||||| | |||  ||||||||||||||| |||| ||||  |||  ||    
T  8340125 attttaaaatagtttttgattgtgcactatgttagtcaagatagtctattaccttaaa-tatttggttaatattatcatatgagtctctcataatattta 8340223  T
Q  672 cttattgtcatatcagtcattataaatacttac 704  Q
    |||||||| |||| ||||  |||||||||||||    
T  8340224 cttattgttatattagtctctataaatacttac 8340256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 778 - 865
Target Start/End: Original strand, 28929529 - 28929615
Alignment:
Q  778 tttgactagcaaagtgtataatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcattacacatttaagga 865  Q
    |||||||| | ||||| ||||||| | |||||| | ||||||| ||||||||||| ||||||||| |||||| ||||| |||||||||    
T  28929529 tttgactaacgaagtgcataatcagaaactattatgaaatttcgatacatttaaa-actattgtggttactcgttacatatttaagga 28929615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 561 - 652
Target Start/End: Original strand, 42844884 - 42844975
Alignment:
Q  561 aatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatat 652  Q
    ||||||||||||||||  ||||  | |||||||| ||||  |||| ||||||||||  || ||||||||||||||| |||||||| ||||||    
T  42844884 aatgtatcaaaattttcgaataggctttgattgtacacttaattagtcaaaatagttcctgatattaaaatgtttcattaatattgtcatat 42844975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 797 - 863
Target Start/End: Original strand, 6915538 - 6915603
Alignment:
Q  797 aatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcattacacatttaag 863  Q
    ||||||| | |||||||||||||  ||||||| || |||||||||||||||| ||||||||||||||    
T  6915538 aatcaaaaattattttaaaattttgatacatt-aaggactattgtgattacttattacacatttaag 6915603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 552 - 682
Target Start/End: Complemental strand, 7681073 - 7680943
Alignment:
Q  552 tagtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcata 651  Q
    ||||| || |||||||||||||||||||||| |  ||||||||||| |   ||| ||||||| ||| || | ||||||||  ||| |||||||| ||||     
T  7681073 tagtccctcaatgtatcaaaattttaaaatagtatttgattgtgcatttcgttagtcaaaatcgtccctaacattaaaataattcgttaatattgtcatc 7680974  T
Q  652 ttagtccctcaatatacgtacttattgtcat 682  Q
    |||||   ||||||| | |||||||||||||    
T  7680973 ttagtatttcaatatccttacttattgtcat 7680943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 779 - 881
Target Start/End: Complemental strand, 21215999 - 21215897
Alignment:
Q  779 ttgactagcaaagtgtataatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcattacacatttaaggaataaaaggactat 878  Q
    ||||||| | ||||| | |||||| ||||||||| ||||||||||||||| || ||||||||||  |||||||| || ||| || ||  |||| ||||||    
T  21215999 ttgactaacgaagtgcacaatcaatgactattttgaaatttcaatacattgaaggactattgtggctactcattccatattcaatgaccaaaatgactat 21215900  T
Q  879 tat 881  Q
    |||    
T  21215899 tat 21215897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 778 - 828
Target Start/End: Original strand, 41303155 - 41303205
Alignment:
Q  778 tttgactagcaaagtgtataatcaaagactattttaaaatttcaatacatt 828  Q
    |||||||||||||||| |||||||| ||||||||||||||||  |||||||    
T  41303155 tttgactagcaaagtgcataatcaatgactattttaaaattttgatacatt 41303205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 559 - 696
Target Start/End: Original strand, 41616691 - 41616828
Alignment:
Q  559 ttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtcc 658  Q
    |||||||||  ||||||||||||| || ||  || ||||||   ||| ||||||||||||   ||||||||||||||  |||||| |||||| | |||||    
T  41616691 ttaatgtattgaaattttaaaataatcttttgttatgcacttcgttagtcaaaatagtctacgatattaaaatgttttattaataatatcatttcagtcc 41616790  T
Q  659 ctcaatatacgtacttattgtcatatcagtcattataa 696  Q
     |  |||||| || |||||||||||||| || ||||||    
T  41616791 ttttatatacttatttattgtcatatcaatctttataa 41616828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 552 - 681
Target Start/End: Complemental strand, 41303214 - 41303083
Alignment:
Q  552 tagtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctc--ttatattaaaatgtttctttaatattatca 649  Q
    ||||| || |||||||||||||||||||||| || |||||| |||||| |  || ||||||||||| |  | | ||||||||  ||  |||||||| |||    
T  41303214 tagtccctcaatgtatcaaaattttaaaatagtcattgattatgcactttgctagtcaaaatagtcccgataacattaaaataatttgttaatattgtca 41303115  T
Q  650 tattagtccctcaatatacgtacttattgtca 681  Q
    ||||||||  | ||||||| || |||||||||    
T  41303114 tattagtcttttaatatacttaattattgtca 41303083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 794 - 857
Target Start/End: Original strand, 10708631 - 10708694
Alignment:
Q  794 tataatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcattacaca 857  Q
    ||||||||||||||||||||||||||  ||||||| |  |||||||||| |||| |||| ||||    
T  10708631 tataatcaaagactattttaaaatttatatacattaatggactattgtggttacccattgcaca 10708694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 530 - 616
Target Start/End: Original strand, 4586772 - 4586857
Alignment:
Q  530 atgtttaacgagtagtctcaattagtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagt 616  Q
    |||| |||||||||||  |||| ||||||||||||||| |||||||||||||| ||  ||||| ||||||   ||| ||||||||||    
T  4586772 atgtgtaacgagtagttacaat-agtctcttaatgtattaaaattttaaaatagtctatgattttgcacttcgttagtcaaaatagt 4586857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 793 - 859
Target Start/End: Original strand, 14532438 - 14532504
Alignment:
Q  793 gtataatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcattacacatt 859  Q
    ||||||| || || |||||||||||||  ||| ||| | |||||||||||| |||||||||||||||    
T  14532438 gtataattaaggattattttaaaattttgatatattaagagactattgtgactactcattacacatt 14532504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 805 - 855
Target Start/End: Complemental strand, 29908973 - 29908923
Alignment:
Q  805 actattttaaaatttcaatacatttaaagactattgtgattactcattaca 855  Q
    |||||||||||||||||||||||||||| |   |||||||||||| |||||    
T  29908973 actattttaaaatttcaatacatttaaaaatagttgtgattactcgttaca 29908923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 622 - 684
Target Start/End: Complemental strand, 34949167 - 34949105
Alignment:
Q  622 atattaaaatgtttctttaatattatcatattagtccctcaatatacgtacttattgtcatat 684  Q
    |||||||||||||||  ||||||| |||||||||||| | ||||||  |||||||| ||||||    
T  34949167 atattaaaatgtttcgataatattgtcatattagtccttaaatatagttacttattatcatat 34949105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 559 - 597
Target Start/End: Complemental strand, 36469615 - 36469577
Alignment:
Q  559 ttaatgtatcaaaattttaaaatactccttgattgtgca 597  Q
    |||||||||||||||||||||||| ||||| ||||||||    
T  36469615 ttaatgtatcaaaattttaaaatagtccttaattgtgca 36469577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 778 - 819
Target Start/End: Complemental strand, 13002999 - 13002958
Alignment:
Q  778 tttgactagcaaagtgtataatcaaagactattttaaaattt 819  Q
    |||||||| || |||| |||||||||||||||||||||||||    
T  13002999 tttgactaacatagtgcataatcaaagactattttaaaattt 13002958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 797 - 842
Target Start/End: Original strand, 16338357 - 16338402
Alignment:
Q  797 aatcaaagactattttaaaatttcaatacatttaaagactattgtg 842  Q
    |||||||||||| ||| ||||||||||||| | |||||||||||||    
T  16338357 aatcaaagactactttgaaatttcaatacactcaaagactattgtg 16338402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 616 - 681
Target Start/End: Complemental strand, 31711463 - 31711398
Alignment:
Q  616 tctcttatattaaaatgtttctttaatattatcatattagtccctcaatatacgtacttattgtca 681  Q
    ||||||| ||||||||||||  |||||||||| |||||| ||| ||||||||| || ||| |||||    
T  31711463 tctcttacattaaaatgttttgttaatattatgatattaatccatcaatatacttatttaatgtca 31711398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 625 - 682
Target Start/End: Original strand, 36348859 - 36348916
Alignment:
Q  625 ttaaaatgtttctttaatattatcatattagtccctcaatatacgtacttattgtcat 682  Q
    ||||| |||||| |||||||| |||||||||||||| ||||| | ||| |||||||||    
T  36348859 ttaaagtgtttcgttaatattgtcatattagtcccttaatattcatacatattgtcat 36348916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 74; Significance: 2e-33; HSPs: 81)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 552 - 708
Target Start/End: Complemental strand, 48973466 - 48973310
Alignment:
Q  552 tagtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctctt-atattaaaatgtttctttaatattatcat 650  Q
    |||||| | ||||||  ||||||| |||||| |||||||||||||| |  ||||||||||||||| |||| || |||||||| ||| |||||||| ||||    
T  48973466 tagtctttcaatgtacaaaaatttcaaaatagtccttgattgtgcaattcattaatcaaaatagt-tcttgatgttaaaatgcttcattaatattgtcat 48973368  T
Q  651 attagtccctcaatatacgtacttattgtcatatcagtcattataaatacttacttat 708  Q
    |||||||| ||||||||| |||||||||||||||| ||| ||||||||||||||||||    
T  48973367 attagtccttcaatatacttacttattgtcatatcggtccttataaatacttacttat 48973310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 535 - 714
Target Start/End: Complemental strand, 17381629 - 17381451
Alignment:
Q  535 taacgagtagtctcaattagtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtt 634  Q
    |||| ||||||| |||| |||| || ||||||||||||||  |||||| ||| |||||||||||| | |||||||||||||||  | |||||||||| ||    
T  17381629 taacaagtagtcacaat-agtccctcaatgtatcaaaattccaaaatagtccctgattgtgcactttgttaatcaaaatagtccttgatattaaaatatt 17381531  T
Q  635 tctttaatattatcatattagtccctcaatatacgtacttattgtcatatcagtcattataaatacttacttatcgtcat 714  Q
    || |||||||| |||||||||||| ||||||||| |||||||| |||| | |||| |||||  |||||| |||| |||||    
T  17381530 tcgttaatattgtcatattagtccttcaatatacttacttattatcatgttagtccttatacgtacttatttattgtcat 17381451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 552 - 819
Target Start/End: Complemental strand, 8171024 - 8170760
Alignment:
Q  552 tagtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcata 651  Q
    ||||| || ||||||| ||||||| |||||| ||  ||||| |||| |   ||| |||||||| ||||| ||||||||||||||| |||||||| |||||    
T  8171024 tagtccctcaatgtataaaaatttcaaaatagtctctgattttgcaattcgttagtcaaaataatctctaatattaaaatgtttcattaatattgtcata 8170925  T
Q  652 ttagtccctcaatatacgtacttattgtcatatcagtcattataaatacttacttatcgtcatatcaattcatatataagaagagctaacgtcggcattg 751  Q
    ||||| | ||||||||| ||||||||||||||||||||  |||||     | ||||| ||||| | ||| | ||||| | ||||| || |    ||||||    
T  8170924 ttagtacttcaatatacttacttattgtcatatcagtccatataa----gtgcttattgtcattttaatccttatatgaaaagagttatcaagagcattg 8170829  T
Q  752 agttaatattttaacgtcagagacta-tttgactagcaaagtgtataatcaaagactattttaaaattt 819  Q
    ||  | |||||| ||||||||||||| |||||||| ||||||| | |||||||||||||||| ||||||    
T  8170828 agagactattttgacgtcagagactattttgactaacaaagtgcacaatcaaagactattttgaaattt 8170760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 552 - 681
Target Start/End: Original strand, 13834370 - 13834499
Alignment:
Q  552 tagtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcata 651  Q
    ||||| || ||| |||||||||||||||||| |||||||||||||||| | ||| |||||||||||| | | ||||||||  ||  |||||||| |||||    
T  13834370 tagtccctcaatttatcaaaattttaaaatagtccttgattgtgcactttgttagtcaaaatagtctttaacattaaaataatttgttaatattgtcata 13834469  T
Q  652 ttagtccctcaatatacgtacttattgtca 681  Q
    ||||||| ||||||||| ||||||||||||    
T  13834470 ttagtccttcaatatacttacttattgtca 13834499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 561 - 714
Target Start/End: Original strand, 971897 - 972048
Alignment:
Q  561 aatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccct 660  Q
    ||||||||||||||| |||||| || ||||||||||||| | ||| ||||| |||||| | |||||  |||||||| |||||||| |||||||| ||  |    
T  971897 aatgtatcaaaatttcaaaatagtctttgattgtgcactttgttagtcaaagtagtctatgatatt--aatgtttcattaatattgtcatattaatcatt 971994  T
Q  661 caatatacgtacttattgtcatatcagtcattataaatacttacttatcgtcat 714  Q
    |||||||| |||||||||| ||||||||| || ||| || |||||||| |||||    
T  971995 caatatacatacttattgtaatatcagtccttgtaagtatttacttattgtcat 972048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 561 - 860
Target Start/End: Complemental strand, 4161937 - 4161642
Alignment:
Q  561 aatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccct 660  Q
    ||||||||| ||||||| |||| |  || |||||||| | | ||| |||||||||||| | ||||||||||||||| |||||||| |||||||||| | |    
T  4161937 aatgtatcacaattttacaatagttattaattgtgcattttgttagtcaaaatagtctatgatattaaaatgtttcattaatattgtcatattagttctt 4161838  T
Q  661 caatatacgtacttattgtcatatcagtcattataaatacttacttatcgtcatatcaattcatatataagaagagctaacgtcggcattgagttaatat 760  Q
    |||||    |||||||| | ||||||||| |||||| ||||||||||| | ||| ||| | | ||||| | || || ||  || |    | ||  | |||    
T  4161837 caata----tacttattatgatatcagtctttataagtacttacttattggcatttcagtccttatatgaaaaaagttattgt-gagtctaagagattat 4161743  T
Q  761 tttaacgtcagagacta-tttgactagcaaagtgtataatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcattacacatt 859  Q
    ||||  ||||||||||| |||||| | || | ||||||||||| ||||||||| ||||||  ||||||| || ||||||||||| |||||||||||||||    
T  4161742 tttagagtcagagactattttgaccaacagaatgtataatcaaggactattttgaaattttgatacattgaaggactattgtgactactcattacacatt 4161643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 590 - 714
Target Start/End: Original strand, 40836712 - 40836836
Alignment:
Q  590 attgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctcaatatacgtacttattgtcatatcagtc 689  Q
    ||||||| || | ||| |||||||||||| | ||||||||||| ||| |||||||| |||||  ||||  |||||| || |||||||| |||||||||||    
T  40836712 attgtgcgctttgttagtcaaaatagtctgtgatattaaaatgcttcattaatattgtcataccagtctttcaatacacttacttattatcatatcagtc 40836811  T
Q  690 attataaatacttacttatcgtcat 714  Q
     |||||||||||||||||| |||||    
T  40836812 cttataaatacttacttattgtcat 40836836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 561 - 681
Target Start/End: Original strand, 51150892 - 51151012
Alignment:
Q  561 aatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccct 660  Q
    |||||||||||||||||||||| | | |||||||||| | | ||| | ||||||||| || | |||||||| |||  |||||||| |||||||||| | |    
T  51150892 aatgtatcaaaattttaaaatagttcgtgattgtgcattttgttagtgaaaatagtccctaacattaaaatattttgttaatattgtcatattagtactt 51150991  T
Q  661 caatatacgtacttattgtca 681  Q
    |||||||| ||||||||||||    
T  51150992 caatatacttacttattgtca 51151012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 561 - 718
Target Start/End: Original strand, 12922218 - 12922376
Alignment:
Q  561 aatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatatta-tcatattagtccc 659  Q
    |||||||| |||||| |||||| |  |||||||||||| || ||| |||||| ||| | |||  ||||||||  || ||||||||  ||| | |||||||    
T  12922218 aatgtatcgaaatttcaaaatagtttttgattgtgcacgatgttagtcaaaaaagttttttacgttaaaatggctcgttaatatttgtcagagtagtccc 12922317  T
Q  660 tcaatatacgtacttattgtcatatcagtcattataaatacttacttatcgtcatatca 718  Q
    ||||||||| | ||||||||||||| ||  |||||||||||||| |||| |||||||||    
T  12922318 tcaatatacttgcttattgtcatattagatattataaatacttaattattgtcatatca 12922376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 789 - 859
Target Start/End: Original strand, 13834524 - 13834594
Alignment:
Q  789 aagtgtataatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcattacacatt 859  Q
    ||||||| ||||| ||||||||||||||||| |||||||| ||||||| |||||| |||||||||||||||    
T  13834524 aagtgtaaaatcagagactattttaaaattttaatacattaaaagactgttgtgactactcattacacatt 13834594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 563 - 720
Target Start/End: Complemental strand, 52701043 - 52700886
Alignment:
Q  563 tgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctca 662  Q
    |||||| ||||||||||||| ||  || |||||||||   |||||||||||||||| | || |||||||||||  |||||||| |||||  ||||| |||    
T  52701043 tgtatctaaattttaaaatagtctatgtttgtgcacttctttaatcaaaatagtctttcatgttaaaatgttttattaatattgtcataacagtccttca 52700944  T
Q  663 atatacgtacttattgtcatatcagtcattataaatacttacttatcgtcatatcaat 720  Q
    |||||| || ||||| |||||||| ||  || || || ||| |||| |||||||||||    
T  52700943 atatacataattattatcatatcaatctctaaaagtagttatttattgtcatatcaat 52700886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 560 - 668
Target Start/End: Complemental strand, 8756019 - 8755911
Alignment:
Q  560 taatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccc 659  Q
    ||||||| ||||||||||||||| || |||||| ||||||   |||||||||||||||||| | ||||||||  ||| |||||||| |||||||| |||     
T  8756019 taatgtaacaaaattttaaaataatcattgattatgcacttcgttaatcaaaatagtctctaacattaaaatacttcgttaatattgtcatattaatcct 8755920  T
Q  660 tcaatatac 668  Q
    | |||||||    
T  8755919 ttaatatac 8755911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 561 - 681
Target Start/End: Complemental strand, 38932870 - 38932751
Alignment:
Q  561 aatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccct 660  Q
    ||||||||||||||||||| |  || | |||||| || | | ||| |||||||||||||| | |||||||| |||| |||||||| |||||||||||| |    
T  38932870 aatgtatcaaaattttaaattg-tcttcgattgtacattttgttagtcaaaatagtctctaacattaaaatatttcattaatattgtcatattagtcctt 38932772  T
Q  661 caatatacgtacttattgtca 681  Q
    |||||||| || |||||||||    
T  38932771 caatatacttatttattgtca 38932751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 552 - 681
Target Start/End: Complemental strand, 45615848 - 45615718
Alignment:
Q  552 tagtctcttaatgtatcaaaattttaaaatactccttgattgtg--cactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatca 649  Q
    ||||| || ||||| || |||||||||| || ||||||||||||  |||| | ||| |||||||||||||| ||||||||||  ||  |||||||| |||    
T  45615848 tagtccctcaatgtttcgaaattttaaa-tagtccttgattgtgtgcactttgttagtcaaaatagtctctaatattaaaataatttgttaatattgtca 45615750  T
Q  650 tattagtccctcaatatacgtacttattgtca 681  Q
    | ||||||| ||||||||| ||||||||||||    
T  45615749 ttttagtccttcaatatacttacttattgtca 45615718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 579 - 714
Target Start/End: Original strand, 14810246 - 14810381
Alignment:
Q  579 aatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctcaatatacgtacttattg 678  Q
    |||| |||||| |||| |||| | ||| |||||||||||| | ||||||| || |||| |||||||| |||| ||||| | |||||| || || |||||     
T  14810246 aatagtccttggttgttcactttgttagtcaaaatagtctttgatattaatatatttcgttaatattgtcatgttagttcttcaatagacttagttattt 14810345  T
Q  679 tcatatcagtcattataaatacttacttatcgtcat 714  Q
    |||||| |||| ||||| |||||||||||| |||||    
T  14810346 tcatattagtccttatacatacttacttattgtcat 14810381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 560 - 688
Target Start/End: Complemental strand, 3534278 - 3534150
Alignment:
Q  560 taatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccc 659  Q
    |||||||| ||||  |||||||| || ||||||||||| |   ||| |||||||||| ||  || ||||||| |||| |||||||| | ||||||||||     
T  3534278 taatgtataaaaaaattaaaatagtcgttgattgtgcaattcgttagtcaaaatagtttcagatgttaaaatatttcattaatatttttatattagtcct 3534179  T
Q  660 tcaatatacgtacttattgtcatatcagt 688  Q
    | ||||||| ||| |||||||||||||||    
T  3534178 ttaatatacttacatattgtcatatcagt 3534150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 638 - 730
Target Start/End: Original strand, 9297480 - 9297572
Alignment:
Q  638 ttaatattatcatattagtccctcaatatacgtacttattgtcatatcagtcattataaatacttacttatcgtcatatcaattcatatataa 730  Q
    |||||||| |||||||||||  | ||||||| || ||||| ||||||||||| ||||||||||||  |||| ||||| ||||||| |||||||    
T  9297480 ttaatattgtcatattagtcattaaatatacttatttattatcatatcagtccttataaatacttctttattgtcatttcaattcctatataa 9297572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 535 - 735
Target Start/End: Original strand, 11839795 - 11839994
Alignment:
Q  535 taacgagtagtctcaattagtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtt 634  Q
    |||||||||| | |||| |||| || ||| |||| |||||| |||||| |||  ||||||||||    ||| |||||||||||  | | ||||||||  |    
T  11839795 taacgagtagccacaat-agtccctcaatatatcgaaatttcaaaatagtcccagattgtgcacctcgttagtcaaaatagtccttgacattaaaatact 11839893  T
Q  635 tctttaatattatcatattagtccctcaatatacgtacttattgtcatatcagtcattataaatacttacttatcgtcatatcaattcatatataagaag 734  Q
    || |||||||| |||||||||||| |||||| || ||||||||||||||| |||| |||  | ||||| ||||| ||||| ||| | | ||||||| |||    
T  11839894 tcgttaatattgtcatattagtccttcaatacacttacttattgtcatataagtccttaccagtacttgcttattgtcatttcagtccctatataaaaag 11839993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 791 - 859
Target Start/End: Original strand, 27395666 - 27395734
Alignment:
Q  791 gtgtataatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcattacacatt 859  Q
    ||||| ||||||||||||||||||||||| |||| |||||  || |||| |||||||||||||||||||    
T  27395666 gtgtacaatcaaagactattttaaaattttaatatatttagtgattattatgattactcattacacatt 27395734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 560 - 708
Target Start/End: Original strand, 30623493 - 30623641
Alignment:
Q  560 taatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccc 659  Q
    |||| |||| ||||||||||||| ||||  ||| || | | | ||||| ||||| |||||| || ||||||||||||  ||||||| | ||| ||||||     
T  30623493 taatatatcgaaattttaaaataatcctaaattatgtattttgttaattaaaattgtctctgatgttaaaatgtttcactaatattgttatactagtcct 30623592  T
Q  660 tcaatatacgtacttattgtcatatcagtcattataaatacttacttat 708  Q
    ||||||||  ||||||||||||| ||| || ||||||| ||||| ||||    
T  30623593 tcaatatatttacttattgtcatgtcaatctttataaacacttatttat 30623641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 797 - 865
Target Start/End: Complemental strand, 32123858 - 32123791
Alignment:
Q  797 aatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcattacacatttaagga 865  Q
    ||||||||||||||||||||||| |||||| || ||||| |||||| |||||||||| |||||||||||    
T  32123858 aatcaaagactattttaaaattttaataca-ttgaagacgattgtggttactcattaaacatttaagga 32123791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 607 - 695
Target Start/End: Complemental strand, 51234471 - 51234383
Alignment:
Q  607 tcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctcaatatacgtacttattgtcatatcagtcattata 695  Q
    |||||||||||||| || |||||||||||  |||||||| ||||||||  |  ||||||||| ||||||||||||| ||||||| ||||    
T  51234471 tcaaaatagtctctgatgttaaaatgttttattaatattgtcatattaaactttcaatatacttacttattgtcatttcagtcactata 51234383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 561 - 676
Target Start/End: Original strand, 9057306 - 9057421
Alignment:
Q  561 aatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccct 660  Q
    ||||||||||||| |||||||| |  ||||||||||||| | ||    |||||||||||||||| ||||| ||||  |||||||| ||||||||||   |    
T  9057306 aatgtatcaaaatattaaaatagtaattgattgtgcactgtcttgggaaaaatagtctcttatactaaaacgttttattaatattgtcatattagttatt 9057405  T
Q  661 caatatacgtacttat 676  Q
    |||||||| |||||||    
T  9057406 caatatacttacttat 9057421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 609 - 660
Target Start/End: Complemental strand, 36218750 - 36218699
Alignment:
Q  609 aaaatagtctcttatattaaaatgtttctttaatattatcatattagtccct 660  Q
    |||||||||||||| ||||||||||||| ||||| |||||||||||||||||    
T  36218750 aaaatagtctcttacattaaaatgtttcattaatcttatcatattagtccct 36218699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 562 - 657
Target Start/End: Complemental strand, 37197637 - 37197542
Alignment:
Q  562 atgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtc 657  Q
    |||||||||| |||||||||| |||||||||| ||| |   ||| |||||||||||| | ||||||||||||||  |||||||| |||||| ||||    
T  37197637 atgtatcaaagttttaaaatagtccttgattgggcatttcgttagtcaaaatagtctttaatattaaaatgtttgattaatattgtcatatcagtc 37197542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 758 - 880
Target Start/End: Original strand, 40317747 - 40317870
Alignment:
Q  758 tattttaacgtcagagactattt-gactagcaaagtgtataatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcattacac 856  Q
    ||||||||||||||||||||||| || || ||||||||| |||||| ||||||||||||| ||  ||||||| |   ||||||||||  | |||||||||    
T  40317747 tattttaacgtcagagactattttgattaacaaagtgtacaatcaaggactattttaaaaattttatacattgatgaactattgtgacaattcattacac 40317846  T
Q  857 atttaaggaataaaaggactatta 880  Q
    ||| | |||  |||| ||||||||    
T  40317847 attcatggatcaaaatgactatta 40317870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 758 - 880
Target Start/End: Original strand, 40327821 - 40327944
Alignment:
Q  758 tattttaacgtcagagactattt-gactagcaaagtgtataatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcattacac 856  Q
    ||||||||||||||||||||||| || || ||||||||| |||||| ||||||||||||| ||  ||||||| |   ||||||||||  | |||||||||    
T  40327821 tattttaacgtcagagactattttgattaacaaagtgtacaatcaaggactattttaaaaattttatacattgatgaactattgtgacaattcattacac 40327920  T
Q  857 atttaaggaataaaaggactatta 880  Q
    ||| | |||  |||| ||||||||    
T  40327921 attcatggatcaaaatgactatta 40327944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 565 - 695
Target Start/End: Original strand, 27395474 - 27395604
Alignment:
Q  565 tatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctcaat 664  Q
    |||||||||||||||||| |  |||||||| ||||   ||| |||||||| ||  | ||||||||||||| | |||||||| | ||||  |||| ||||     
T  27395474 tatcaaaattttaaaataatatttgattgttcacttcgttagtcaaaataatccttgatattaaaatgttacgttaatattgttatatcggtccttcaac 27395573  T
Q  665 atacgtacttattgtcatatcagtcattata 695  Q
    |||| || |||||||||| ||||||||||||    
T  27395574 atacttatttattgtcatttcagtcattata 27395604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 569 - 707
Target Start/End: Complemental strand, 29116431 - 29116293
Alignment:
Q  569 aaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctcaatatac 668  Q
    ||||||| |||||| || |||||| ||||||  |||  |||||||| | | | | ||||||||| ||| ||||||||| ||||| ||||  ||||||||     
T  29116431 aaaatttcaaaatagtcattgattatgcactgcattggtcaaaataatttgtgacattaaaatgcttcgttaatattaacatataagtcattcaatatat 29116332  T
Q  669 gtacttattgtcatatcagtcattataaatacttactta 707  Q
     || |||||||||||| |||| ||||||||| |||||||    
T  29116331 ttatttattgtcatattagtccttataaataattactta 29116293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 552 - 717
Target Start/End: Complemental strand, 924876 - 924711
Alignment:
Q  552 tagtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcata 651  Q
    |||||| | |||||| ||||||||||||||| |   ||||| |||| ||| ||| |||||||||||  |||| |||  |||||||  ||||||| |||||    
T  924876 tagtctttcaatgtagcaaaattttaaaatagtatctgattatgcattatgttagtcaaaatagtcatttatgttacgatgtttcgctaatattgtcata 924777  T
Q  652 ttagtccctcaatatacgtacttattgtcatatcagtcattataaatacttacttatcgtcatatc 717  Q
    ||| |   ||||||||  |||||||| | |||||  |||||| || ||||||||||| ||||||||    
T  924776 ttaataattcaatatatttacttattatgatatcgatcattaaaagtacttacttattgtcatatc 924711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 778 - 839
Target Start/End: Original strand, 7616957 - 7617018
Alignment:
Q  778 tttgactagcaaagtgtataatcaaagactattttaaaatttcaatacatttaaagactatt 839  Q
    |||||||| ||||||| | ||||||| ||||||||||||||| |||||||| ||||||||||    
T  7616957 tttgactaacaaagtgcaaaatcaaaaactattttaaaattttaatacattaaaagactatt 7617018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 552 - 681
Target Start/End: Complemental strand, 32934203 - 32934074
Alignment:
Q  552 tagtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcata 651  Q
    ||||| || |||||||||||||||||||||| |  ||||||||||||| |  || |||||||||| ||| | ||||||||  ||  |||||||| ||| |    
T  32934203 tagtccctcaatgtatcaaaattttaaaatagtttttgattgtgcactttgctagtcaaaatagtttctaacattaaaataatttgttaatattgtcaca 32934104  T
Q  652 ttagtccctcaatatacgtacttattgtca 681  Q
    ||||||  | ||||||| ||||| ||||||    
T  32934103 ttagtcttttaatatacttacttgttgtca 32934074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 773 - 838
Target Start/End: Original strand, 39331164 - 39331229
Alignment:
Q  773 gactatttgactagcaaagtgtataatcaaagactattttaaaatttcaatacatttaaagactat 838  Q
    ||||||||||| | | ||||| | ||||||| |||||||||||||||||||||||| |||||||||    
T  39331164 gactatttgacaaacgaagtgcacaatcaaaaactattttaaaatttcaatacattaaaagactat 39331229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 778 - 859
Target Start/End: Complemental strand, 45615704 - 45615623
Alignment:
Q  778 tttgactagcaaagtgtataatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcattacacatt 859  Q
    ||||||||  |||||| | ||||| ||||||||||||||||| |||||||| ||||||| |||||| || | ||||||||||    
T  45615704 tttgactaataaagtgcaaaatcagagactattttaaaattttaatacattgaaagactgttgtgactattaattacacatt 45615623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 561 - 617
Target Start/End: Complemental strand, 11840088 - 11840032
Alignment:
Q  561 aatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtc 617  Q
    ||||||||||||||| |||||| ||| |||||||||||| | |||||||||||||||    
T  11840088 aatgtatcaaaatttcaaaatagtccctgattgtgcactttgttaatcaaaatagtc 11840032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 530 - 614
Target Start/End: Original strand, 20177282 - 20177365
Alignment:
Q  530 atgtttaacgagtagtctcaattagtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaata 614  Q
    |||| |||||||||||| |||| ||| |||| ||||||||||| || |||||| || |||||||||||| |||||| ||||||||    
T  20177282 atgtgtaacgagtagtcacaat-agtttcttgatgtatcaaaaattcaaaataatcgttgattgtgcaccatattagtcaaaata 20177365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 568 - 684
Target Start/End: Original strand, 33360873 - 33360989
Alignment:
Q  568 caaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctcaatata 667  Q
    |||||||| |||||| || |||||| |||||||| ||| | ||||| ||||||||  ||||||| || | |||||||| |||||||||||  | ||  ||    
T  33360873 caaaatttcaaaatagtctttgattatgcactatgttagtaaaaattgtctcttacgttaaaatattgcattaatattgtcatattagtcatttaacgta 33360972  T
Q  668 cgtacttattgtcatat 684  Q
    | |||||||||||||||    
T  33360973 cttacttattgtcatat 33360989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 565 - 620
Target Start/End: Complemental strand, 29223463 - 29223408
Alignment:
Q  565 tatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctct 620  Q
    ||||||||||||| |||| ||| |||||||||||||| ||| ||||||||||||||    
T  29223463 tatcaaaattttataataatccatgattgtgcactatgttagtcaaaatagtctct 29223408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 559 - 686
Target Start/End: Original strand, 31241039 - 31241166
Alignment:
Q  559 ttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtcc 658  Q
    |||||||||| ||||||| ||||| |   |||||||| | ||||||| |||||||  ||||||| |||||||| |||  |||||||||||  |||| |||    
T  31241039 ttaatgtatcgaaattttgaaatagtttatgattgtgtattatattagtcaaaatgatctcttacattaaaatattttgttaatattatcgcattattcc 31241138  T
Q  659 ctcaatatacgtacttattgtcatatca 686  Q
     ||||||||   | ||||||||||||||    
T  31241139 ttcaatatattaatttattgtcatatca 31241166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 561 - 699
Target Start/End: Original strand, 33860214 - 33860355
Alignment:
Q  561 aatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaa---tgtttctttaatattatcatattagtc 657  Q
    |||||||  |||||| | |||| || |||||| |||||||| ||| ||||||||||   | |||||||||   |||||| |||||||| | |||||||||    
T  33860214 aatgtattgaaatttcacaatagtcattgattatgcactattttagtcaaaatagttcatgatattaaaaaaatgtttcgttaatattgtgatattagtc 33860313  T
Q  658 cctcaatatacgtacttattgtcatatcagtcattataaata 699  Q
      |||||||||  ||||||||||||| ||||  |||||||||    
T  33860314 tttcaatatactaacttattgtcataccagttcttataaata 33860355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 778 - 861
Target Start/End: Original strand, 35255467 - 35255550
Alignment:
Q  778 tttgactagcaaagtgtataatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcattacacattta 861  Q
    ||||||||  |||||| | ||||| | ||||||||||||||| |||||||| | |||||||||||| ||||| ||||| |||||    
T  35255467 tttgactaataaagtgcaaaatcagatactattttaaaattttaatacattgagagactattgtgactactcgttacatattta 35255550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 561 - 620
Target Start/End: Complemental strand, 40317818 - 40317759
Alignment:
Q  561 aatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctct 620  Q
    ||||||| ||| |||||||||| ||||||||||| |||| | ||||||||||||||||||    
T  40317818 aatgtataaaatttttaaaatagtccttgattgtacactttgttaatcaaaatagtctct 40317759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 561 - 620
Target Start/End: Complemental strand, 40327892 - 40327833
Alignment:
Q  561 aatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctct 620  Q
    ||||||| ||| |||||||||| ||||||||||| |||| | ||||||||||||||||||    
T  40327892 aatgtataaaatttttaaaatagtccttgattgtacactttgttaatcaaaatagtctct 40327833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 767 - 841
Target Start/End: Complemental strand, 46804869 - 46804794
Alignment:
Q  767 gtcagagactattt-gactagcaaagtgtataatcaaagactattttaaaatttcaatacatttaaagactattgt 841  Q
    |||||||||||||| ||||| ||||||||| ||||| |||||||||||||||||  ||||||| |  |||||||||    
T  46804869 gtcagagactattttgactaacaaagtgtacaatcagagactattttaaaattttgatacattgagggactattgt 46804794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 607 - 702
Target Start/End: Complemental strand, 46805025 - 46804930
Alignment:
Q  607 tcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctcaatatacgtacttattgtcatatcagtcattataaatactt 702  Q
    ||||||||||| || |||||||||| |||| ||||||||||||| | ||| | ||||||||| |||||| | || ||| |||| |||||| |||||    
T  46805025 tcaaaatagtccctgatattaaaatatttcattaatattatcatgtcagttcttcaatatacttacttaatatcgtattagtccttataagtactt 46804930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 530 - 620
Target Start/End: Complemental strand, 4215251 - 4215162
Alignment:
Q  530 atgtttaacgagtagtctcaattagtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctct 620  Q
    |||| |||||||||||| |||| |||| || |||| ||||||||||||||||| ||   |||||||||||   ||||||||||||||||||    
T  4215251 atgtgtaacgagtagtcgcaat-agtccctcaatgaatcaaaattttaaaatagtctcggattgtgcacttcgttaatcaaaatagtctct 4215162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 758 - 859
Target Start/End: Original strand, 32934123 - 32934225
Alignment:
Q  758 tattttaacgtcagagactattt-gactagcaaagtgtataatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcattacac 856  Q
    |||||||| || ||| ||||||| ||||||||||||| | ||||||| |||||||||||||||  ||||||| |  ||||||| || | |||| ||||||    
T  32934123 tattttaatgttagaaactattttgactagcaaagtgcacaatcaaaaactattttaaaattttgatacattgagggactattatggtcactccttacac 32934222  T
Q  857 att 859  Q
    |||    
T  32934223 att 32934225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 778 - 843
Target Start/End: Complemental strand, 971947 - 971882
Alignment:
Q  778 tttgactagcaaagtgtataatcaaagactattttaaaatttcaatacatttaaagactattgtga 843  Q
    |||||||| ||||||| | |||||||||||||||| ||||||  ||||||| || |||||||||||    
T  971947 tttgactaacaaagtgcacaatcaaagactattttgaaattttgatacattgaatgactattgtga 971882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 559 - 616
Target Start/End: Complemental strand, 30623765 - 30623708
Alignment:
Q  559 ttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagt 616  Q
    |||||||||||||||||||||| | ||  |||||||||||| | ||||||||||||||    
T  30623765 ttaatgtatcaaaattttaaaacagtctctgattgtgcactctcttaatcaaaatagt 30623708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 778 - 859
Target Start/End: Original strand, 40407642 - 40407722
Alignment:
Q  778 tttgactagcaaagtgtataatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcattacacatt 859  Q
    ||||||||||||| || | |||||| ||||||||||||||||  ||||||| || ||||||| || |||||| |||||||||    
T  40407642 tttgactagcaaa-tgcacaatcaatgactattttaaaattttgatacattgaaggactattatggttactccttacacatt 40407722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 555 - 620
Target Start/End: Complemental strand, 40836957 - 40836892
Alignment:
Q  555 tctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctct 620  Q
    ||||||||||||| |||||||||||||| || ||||||||| ||  | ||| ||||||||||||||    
T  40836957 tctcttaatgtattaaaattttaaaatagtcattgattgtgtaccgtgttagtcaaaatagtctct 40836892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 552 - 686
Target Start/End: Original strand, 46216984 - 46217119
Alignment:
Q  552 tagtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtc--tcttatattaaaatgtttctttaatattatca 649  Q
    |||||||| |||||||||||||||||||||| | | |||||||||||| |  || || ||||||||  | ||| | ||||||| |   ||| |||| |||    
T  46216984 tagtctctcaatgtatcaaaattttaaaatagttcatgattgtgcactttggtattc-aaatagtcctttttacactaaaatgatgtgttagtattgtca 46217082  T
Q  650 tattagtccctcaatatacgtacttattgtcatatca 686  Q
    ||||||||||||||||||  || ||||| ||||||||    
T  46217083 tattagtccctcaatatatttatttattatcatatca 46217119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 552 - 681
Target Start/End: Original strand, 56095063 - 56095192
Alignment:
Q  552 tagtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcata 651  Q
    ||||| || |||||||||||||||||||||| |  |||||| | |||| |  || |||| |||||| || | ||||||||  ||  |||||||| |||||    
T  56095063 tagtccctcaatgtatcaaaattttaaaatagtatttgattattcacttttctagtcaacatagtccctaacattaaaataatttgttaatattgtcata 56095162  T
Q  652 ttagtccctcaatatacgtacttattgtca 681  Q
    ||||||  | ||||||| ||||||||||||    
T  56095163 ttagtcttttaatatacttacttattgtca 56095192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 778 - 859
Target Start/End: Original strand, 56095205 - 56095286
Alignment:
Q  778 tttgactagcaaagtgtataatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcattacacatt 859  Q
    |||||||| ||||||| | ||||| |||| |||||||||||| |||||| | | | |||||||||| ||||| |||||||||    
T  56095205 tttgactaacaaagtgcaaaatcagagacaattttaaaattttaatacaatgagatactattgtgactactcgttacacatt 56095286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 805 - 865
Target Start/End: Original strand, 1758497 - 1758557
Alignment:
Q  805 actattttaaaatttcaatacatttaaagactattgtgattactcattacacatttaagga 865  Q
    ||||| ||||||||| |||||||| | ||||||||||||||||| |||| ||||| |||||    
T  1758497 actatcttaaaattttaatacattgagagactattgtgattacttattaaacattcaagga 1758557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 552 - 684
Target Start/End: Complemental strand, 24806792 - 24806661
Alignment:
Q  552 tagtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcata 651  Q
    ||||| ||||||||||  |||||| |||||| ||||| ||| || | |  |||| |||||||||||||| | ||||||||  ||  |||||||| |||||    
T  24806792 tagtcccttaatgtattgaaatttgaaaatagtcctt-attatgtatttcattagtcaaaatagtctctaacattaaaataatttgttaatattgtcata 24806694  T
Q  652 ttagtccctcaatatacgtacttattgtcatat 684  Q
     ||||   ||||||||| |||||||||||||||    
T  24806693 gtagtttttcaatatacttacttattgtcatat 24806661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 797 - 861
Target Start/End: Original strand, 30623732 - 30623796
Alignment:
Q  797 aatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcattacacattta 861  Q
    ||||| ||||| |||||||||||  ||||||| ||||| ||||||||||||||||| || |||||    
T  30623732 aatcagagactgttttaaaattttgatacattaaaagattattgtgattactcattgcatattta 30623796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 756 - 859
Target Start/End: Complemental strand, 33360939 - 33360835
Alignment:
Q  756 aatattttaacgtcagagactatttg-actagcaaagtgtataatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcattac 854  Q
    ||||||||||||| |||||| ||||  |||| || |||| |||||||||||||||||| ||||||   || | | || ||||||||||||||||  ||||    
T  33360939 aatattttaacgtaagagacaatttttactaacatagtgcataatcaaagactattttgaaattttgttatactgaaggactattgtgattacttcttac 33360840  T
Q  855 acatt 859  Q
    |||||    
T  33360839 acatt 33360835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 535 - 615
Target Start/End: Complemental strand, 35255542 - 35255463
Alignment:
Q  535 taacgagtagtctcaattagtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatag 615  Q
    |||||||||||| |||| ||||||| ||||||| |||||||||||||| |   ||||| |||||| ||||| |||||||||    
T  35255542 taacgagtagtcacaat-agtctctcaatgtattaaaattttaaaatagtatctgattttgcactttattagtcaaaatag 35255463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 531 - 667
Target Start/End: Complemental strand, 46433664 - 46433529
Alignment:
Q  531 tgtttaacgagtagtctcaattagtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaa 630  Q
    |||||||||||| ||| ||||| |||  | ||||||||||||||||  ||||  | ||||||||  |||  |||| ||||||||||  || |||||||||    
T  46433664 tgtttaacgagtggtcacaatt-gtccttcaatgtatcaaaattttcgaataggctttgattgtatacttaattagtcaaaatagttcctgatattaaaa 46433566  T
Q  631 tgtttctttaatattatcatattagtccctcaatata 667  Q
    |||||| ||||||||  ||||| | ||| ||||||||    
T  46433565 tgtttcattaatattggcatatcaatccttcaatata 46433529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 552 - 620
Target Start/End: Original strand, 46804798 - 46804866
Alignment:
Q  552 tagtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctct 620  Q
    ||||| || |||||||||||||||||||||| ||  ||||||| |||| | ||| ||||||||||||||    
T  46804798 tagtccctcaatgtatcaaaattttaaaatagtctctgattgtacactttgttagtcaaaatagtctct 46804866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 559 - 614
Target Start/End: Original strand, 2350919 - 2350974
Alignment:
Q  559 ttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaata 614  Q
    |||||||||| ||||||||||||| ||| | |||||||||||| ||| ||||||||    
T  2350919 ttaatgtatccaaattttaaaatagtccataattgtgcactatgttagtcaaaata 2350974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 758 - 880
Target Start/End: Complemental strand, 12034505 - 12034382
Alignment:
Q  758 tattttaacgtcagagactattt-gactagcaaagtgtataatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcattacac 856  Q
    |||||||  |||||||||||||| ||||| |||||| || ||||| ||||||||||  |||||  ||||||| |  ||||||||||| ||||| ||| ||    
T  12034505 tattttagtgtcagagactattttgactaacaaagtatacaatcagagactattttgcaattttgatacattgagggactattgtgactactcgttatac 12034406  T
Q  857 atttaaggaataaaaggactatta 880  Q
    ||| | |||  |||| ||||||||    
T  12034405 attcagggaccaaaatgactatta 12034382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 797 - 828
Target Start/End: Original strand, 25855289 - 25855320
Alignment:
Q  797 aatcaaagactattttaaaatttcaatacatt 828  Q
    ||||||||||||||||||||||||||||||||    
T  25855289 aatcaaagactattttaaaatttcaatacatt 25855320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 778 - 829
Target Start/End: Original strand, 31241259 - 31241310
Alignment:
Q  778 tttgactagcaaagtgtataatcaaagactattttaaaatttcaatacattt 829  Q
    ||||||||  |||||||||||| ||||||||||| ||||||||||| |||||    
T  31241259 tttgactaagaaagtgtataattaaagactatttcaaaatttcaatgcattt 31241310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 759 - 861
Target Start/End: Complemental strand, 35075743 - 35075640
Alignment:
Q  759 attttaacgtcagagactattt-gactagcaaagtgtataatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcattacaca 857  Q
    |||||||||  ||||||||||| ||| | ||||||||| | || | ||||||||||||||||  | ||||| ||| | |||||||| ||||||||||| |    
T  35075743 attttaacggaagagactattttgacgaacaaagtgtacagtcgatgactattttaaaattttgacacattcaaatattattgtgactactcattacata 35075644  T
Q  858 ttta 861  Q
    ||||    
T  35075643 ttta 35075640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 507 - 582
Target Start/End: Complemental strand, 51151128 - 51151053
Alignment:
Q  507 ataatagtcattttggttctcttatgtttaacgagtagtctcaattagtctcttaatgtatcaaaattttaaaata 582  Q
    |||||||| |||||||| ||   |||| |||||||||||| |||| | ||||| ||||||| ||||||||||||||    
T  51151128 ataatagttattttggtccttgaatgtgtaacgagtagtcacaataaatctctcaatgtattaaaattttaaaata 51151053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 758 - 828
Target Start/End: Complemental strand, 56095143 - 56095072
Alignment:
Q  758 tattttaacgtcagagactat-ttgactagcaaagtgtataatcaaagactattttaaaatttcaatacatt 828  Q
    |||||||| || || |||||| |||||||| |||||| ||||||||| |||||||||||||||  |||||||    
T  56095143 tattttaatgttagggactatgttgactagaaaagtgaataatcaaatactattttaaaattttgatacatt 56095072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 758 - 859
Target Start/End: Complemental strand, 13834450 - 13834348
Alignment:
Q  758 tattttaacgtcagagactattt-gactagcaaagtgtataatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcattacac 856  Q
    |||||||| || | ||||||||| ||||| ||||||| | |||||| ||||||||||||||||  ||| ||| |  ||||||| || |||||| ||||||    
T  13834450 tattttaatgttaaagactattttgactaacaaagtgcacaatcaaggactattttaaaattttgataaattgagggactattatggttactccttacac 13834351  T
Q  857 att 859  Q
    |||    
T  13834350 att 13834348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 758 - 859
Target Start/End: Original strand, 42375216 - 42375318
Alignment:
Q  758 tattttaacgtcagagactatttga-ctagcaaagtgtataatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcattacac 856  Q
    |||||||| |||||||||||||| | ||| | ||||| | ||||||| |||| ||| ||||||| ||||||| ||  | |||||||  ||||||||||||    
T  42375216 tattttaatgtcagagactattttaactaacgaagtgcagaatcaaaaactactttgaaatttcgatacattaaagaattattgtggctactcattacac 42375315  T
Q  857 att 859  Q
    |||    
T  42375316 att 42375318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 797 - 859
Target Start/End: Original strand, 46805039 - 46805101
Alignment:
Q  797 aatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcattacacatt 859  Q
    ||||| |||| |||||||||||| |||| ||| |||||||||| ||| ||||| |||||||||    
T  46805039 aatcagagacaattttaaaattttaatatattgaaagactattatgactactcgttacacatt 46805101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 637 - 682
Target Start/End: Original strand, 7616899 - 7616944
Alignment:
Q  637 tttaatattatcatattagtccctcaatatacgtacttattgtcat 682  Q
    |||||||||||||||||||||  ||||||||| || ||||||||||    
T  7616899 tttaatattatcatattagtcattcaatatacttatttattgtcat 7616944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 552 - 617
Target Start/End: Complemental strand, 7617016 - 7616951
Alignment:
Q  552 tagtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtc 617  Q
    |||||| ||||||||| |||||||||||||| |  |||||| |||||| | ||| |||||||||||    
T  7617016 tagtcttttaatgtattaaaattttaaaatagtttttgattttgcactttgttagtcaaaatagtc 7616951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 607 - 708
Target Start/End: Original strand, 8678013 - 8678114
Alignment:
Q  607 tcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctcaatatacgtacttattgtcatatcagtcattataaatacttactt 706  Q
    |||||| ||||| | ||||||||||||||| ||||   | |||||| |||   ||||||||| |||||||||| |||  |||| ||| ||||||||||||    
T  8678013 tcaaaaaagtctttaatattaaaatgtttcattaactatgtcatatcagtttttcaatatacttacttattgtgataagagtccttacaaatacttactt 8678112  T
Q  707 at 708  Q
    ||    
T  8678113 at 8678114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 564 - 617
Target Start/End: Complemental strand, 14810493 - 14810440
Alignment:
Q  564 gtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtc 617  Q
    |||||||||||| |||||| | ||||||||| |||| ||||| |||||||||||    
T  14810493 gtatcaaaatttcaaaatagttcttgattgtccactttattagtcaaaatagtc 14810440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 801 - 842
Target Start/End: Complemental strand, 22467277 - 22467236
Alignment:
Q  801 aaagactattttaaaatttcaatacatttaaagactattgtg 842  Q
    |||||||||||| |||||||||||||||| | ||||||||||    
T  22467277 aaagactattttcaaatttcaatacatttgaggactattgtg 22467236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 559 - 616
Target Start/End: Complemental strand, 25855322 - 25855265
Alignment:
Q  559 ttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagt 616  Q
    |||||||||  ||||||||||||| || |||||||||||||||  |||| ||||||||    
T  25855322 ttaatgtattgaaattttaaaatagtctttgattgtgcactatgataattaaaatagt 25855265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 638 - 679
Target Start/End: Complemental strand, 36409697 - 36409656
Alignment:
Q  638 ttaatattatcatattagtccctcaatatacgtacttattgt 679  Q
    |||||||| |||||||||||| ||||||||| ||||||||||    
T  36409697 ttaatattgtcatattagtccttcaatatacttacttattgt 36409656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 638 - 679
Target Start/End: Complemental strand, 36423863 - 36423822
Alignment:
Q  638 ttaatattatcatattagtccctcaatatacgtacttattgt 679  Q
    |||||||| |||||||||||| ||||||||| ||||||||||    
T  36423863 ttaatattgtcatattagtccttcaatatacttacttattgt 36423822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 787 - 859
Target Start/End: Complemental strand, 46871616 - 46871546
Alignment:
Q  787 caaagtgtataatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcattacacatt 859  Q
    ||||||||| |||||||||||  ||||||||||||||| ||| | |||||| | ||| ||||| |||||||||    
T  46871616 caaagtgtacaatcaaagact--tttaaaatttcaatatattgagagactaatctgactactcgttacacatt 46871546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 797 - 865
Target Start/End: Original strand, 51151043 - 51151112
Alignment:
Q  797 aatcaaagactattttaaaatttcaatacatttaaaga-ctattgtgattactcattacacatttaagga 865  Q
    ||||| ||||||||||||||||| |||||||| | |||  |||||||| ||||| ||||||||| |||||    
T  51151043 aatcagagactattttaaaattttaatacattgagagatttattgtgactactcgttacacattcaagga 51151112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 69; Significance: 2e-30; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 559 - 714
Target Start/End: Original strand, 6541056 - 6541209
Alignment:
Q  559 ttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtcc 658  Q
    |||||||||||||||||  ||||| ||||||||||| | || | ||| ||||  || ||| | | |||||||| |||| |||||||| ||||||||||||    
T  6541056 ttaatgtatcaaaatttccaaatagtccttgattgttctctttgttagtcaa--taatctttgacattaaaatatttcgttaatattgtcatattagtcc 6541153  T
Q  659 ctcaatatacgtacttattgtcatatcagtcattataaatacttacttatcgtcat 714  Q
     ||||||||| |||||||||||||||||||| |||||||||||||||||| |||||    
T  6541154 ttcaatatacttacttattgtcatatcagtctttataaatacttacttattgtcat 6541209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 561 - 714
Target Start/End: Complemental strand, 51273495 - 51273342
Alignment:
Q  561 aatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccct 660  Q
    ||||||| |||||||||||||||||| |||||||||| | | ||  |||||||||||  | |||||||| | |||| |||||||| ||||||||||| ||    
T  51273495 aatgtatgaaaattttaaaatactccgtgattgtgcaatttttttgtcaaaatagtcgttgatattaaattttttcattaatattgtcatattagtcact 51273396  T
Q  661 caatatacgtacttattgtcatatcagtcattataaatacttacttatcgtcat 714  Q
    |||||||  ||||||||||||||  |||| |||||| ||||||||||| |||||    
T  51273395 caatatatttacttattgtcatacaagtccttataagtacttacttattgtcat 51273342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 609 - 855
Target Start/End: Complemental strand, 34827068 - 34826822
Alignment:
Q  609 aaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctcaatatacgtacttattgtcatatcagtcattataaatacttacttat 708  Q
    |||||||||| | || |||||||||||| |||||||| |||||||||||  ||||||||| || ||||||||||||||||  |||||| |||||||||||    
T  34827068 aaaatagtctttgatgttaaaatgtttcgttaatattgtcatattagtcattcaatatacttatttattgtcatatcagtacttataagtacttacttat 34826969  T
Q  709 cgtcatatcaattcatatataagaagagctaacgtcggcattgagttaatattttaacgtcagagacta-tttgactagcaaagtgtataatcaaagact 807  Q
     ||||| ||  ||| ||||| | || || ||  ||  ||||| ||  | ||||||||||||| |||||| |||||||| || | || | |||||  || |    
T  34826968 tgtcatttcggttcctatatgaaaaaagttattgtgagcattaagagattattttaacgtcaaagactattttgactaacagaatgcacaatcagtga-t 34826870  T
Q  808 attttaaaatttcaatacatttaaagactattgtgattactcattaca 855  Q
    ||||||||||||  ||||||| || ||||||||||||||  |||||||    
T  34826869 attttaaaattttgatacattgaaggactattgtgattaaccattaca 34826822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 559 - 859
Target Start/End: Complemental strand, 5529926 - 5529627
Alignment:
Q  559 ttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtcc 658  Q
    ||||| |||||||||||||||||| ||| | ||| |||||| | ||| |||||||||| ||| | ||||||||  ||| |||||||| || ||||||| |    
T  5529926 ttaatatatcaaaattttaaaataatccctaattatgcactttgttagtcaaaatagtttctgacattaaaatacttcgttaatattgtcttattagtac 5529827  T
Q  659 ctcaatatacgtacttattgtcatatcagtcattataaatacttacttatcgtcatatcaattcatatataagaagagctaacgtcggcattgagttaat 758  Q
     | ||||||| |||||||| | ||||||||  |||||  ||||| |  || ||||| ||||||| |||| || ||||| || |||  | |||||| || |    
T  5529826 ttaaatatacttacttattattatatcagttcttatatgtacttgc--attgtcatttcaattcctataaaaaaagagttatcgtgagtattgagatatt 5529729  T
Q  759 attttaacgtcagagacta-tttgactagcaaagtgtataatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcattacaca 857  Q
    ||||||  |||| |||||| |||||||| ||||  | | ||||| |||||||||||||| ||  ||| ||| || ||||| |||||  |||| |||||||    
T  5529728 attttagtgtcaaagactattttgactaacaaatcgcacaatcagagactattttaaaactttgatatattgaaggactactgtgacaactccttacaca 5529629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 552 - 714
Target Start/End: Complemental strand, 38267474 - 38267312
Alignment:
Q  552 tagtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcata 651  Q
    ||||| || ||||||| ||||||| |||||| ||||||||| |||| |  |||  | ||||||| | || ||  ||||||| ||| |||||||| |||||    
T  38267474 tagtccctcaatgtataaaaatttcaaaataatccttgattatgcaattcattcgttaaaatagcccctgatgataaaatgcttcattaatattgtcata 38267375  T
Q  652 ttagtccctcaatatacgtacttattgtcatatcagtcattataaatacttacttatcgtcat 714  Q
    ||| ||| ||||||||  ||||||||||| |||||||| |||||| ||||||||||| |||||    
T  38267374 ttaatccttcaatatatttacttattgtcgtatcagtccttataagtacttacttattgtcat 38267312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 552 - 618
Target Start/End: Original strand, 27900662 - 27900728
Alignment:
Q  552 tagtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtct 618  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||| || || ||||||||||||    
T  27900662 tagtctcttaatgtatcaaaattttaaaatagtccctgattgtgcactctaatagtcaaaatagtct 27900728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 564 - 714
Target Start/End: Complemental strand, 32743381 - 32743231
Alignment:
Q  564 gtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctcaa 663  Q
    ||||||||||||||||||| || |||||||| || |   ||| |||||||| ||||| | |||||||| ||||  ||||||| | |||||| ||  ||||    
T  32743381 gtatcaaaattttaaaataatctttgattgtacatttcgttagtcaaaataatctctgacattaaaatatttcgctaatattcttatattaatcattcaa 32743282  T
Q  664 tatacgtacttattgtcatatcagtcattataaatacttacttatcgtcat 714  Q
    ||||| |||||| ||||||||||||| | |||  ||||||||||| |||||    
T  32743281 tatacttacttactgtcatatcagtcttgatacgtacttacttattgtcat 32743231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 590 - 719
Target Start/End: Original strand, 7151895 - 7152023
Alignment:
Q  590 attgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctcaatatacgtacttattgtcatatcagtc 689  Q
    |||||||| |||||||||||||||||| ||||| ||||||||  ||| |||||||| |||||||||||  | ||||||| |||||||| |||||| | ||    
T  7151895 attgtgcattatattaatcaaaatagtttcttacattaaaat-attcgttaatattgtcatattagtcttttaatatacttacttattatcatattaatc 7151993  T
Q  690 attataaatacttacttatcgtcatatcaa 719  Q
    | ||| ||||| || |||| || |||||||    
T  7151994 aatatgaatacatatttattgttatatcaa 7152023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 552 - 620
Target Start/End: Complemental strand, 29795323 - 29795255
Alignment:
Q  552 tagtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctct 620  Q
    |||||| ||||| |||||||||||||||||| |  ||||||||||||||| ||||||||||||||||||    
T  29795323 tagtcttttaatatatcaaaattttaaaatagtatttgattgtgcactatgttaatcaaaatagtctct 29795255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 506 - 701
Target Start/End: Original strand, 8234048 - 8234241
Alignment:
Q  506 gataatagtcattttggttctcttatgtttaacgagtagtctcaattagtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatatta 605  Q
    |||||||||||||||||| ||   |||| ||| |||||||| |||| |  ||||  |||||| |||| || |||||| |||||||||||||| |  ||||    
T  8234048 gataatagtcattttggtccttaaatgtgtaatgagtagtcgcaataac-ctctctatgtataaaaaattcaaaatagtccttgattgtgcaatccatta 8234146  T
Q  606 atcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctcaatatacgtacttattgtcatatcagtcattataaatact 701  Q
     ||||||||||| |   | |||||||| ||| |||||| | | || ||||||| |||| |||| |||||||||||||||||||| |||||| ||||    
T  8234147 gtcaaaatagtccccggtgttaaaatgcttcattaataatgttattttagtccttcaa-atacatacttattgtcatatcagtctttataagtact 8234241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 561 - 720
Target Start/End: Original strand, 33747321 - 33747480
Alignment:
Q  561 aatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccct 660  Q
    |||||||| |||||| |||| | |  |||||| ||||||   ||| |||||||||||||| ||||||||||| | | |||||||| |||||||||||  |    
T  33747321 aatgtatcgaaatttcaaaacagtatttgattctgcacttcgttagtcaaaatagtctctgatattaaaatgctccattaatattgtcatattagtcgtt 33747420  T
Q  661 caatatacgtacttattgtcatatcagtcattataaatacttacttatcgtcatatcaat 720  Q
    |||| ||  |||||||||| | ||||||  |||||| ||||||||||  ||||| |||||    
T  33747421 caatttatatacttattgtaacatcagttcttataagtacttacttactgtcatttcaat 33747480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 797 - 880
Target Start/End: Complemental strand, 39162489 - 39162406
Alignment:
Q  797 aatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcattacacatttaaggaataaaaggactatta 880  Q
    ||||||| |||||||| ||||||||||||||| ||  ||||||||||||||||||||| |||| |||||  |||| ||||||||    
T  39162489 aatcaaaaactattttgaaatttcaatacattgaagtactattgtgattactcattacgcattcaaggaccaaaatgactatta 39162406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 640 - 865
Target Start/End: Complemental strand, 19464456 - 19464230
Alignment:
Q  640 aatattatcatattagtccctcaatatacgtacttattgtcatatcagtcattataaatacttacttatcgtcatatcaattcatatataagaagagcta 739  Q
    |||||| |||||||| ||  ||||||||| || ||||| |||||  |||  ||||| ||||||||| |  ||||| ||| | | ||||| | ||||| ||    
T  19464456 aatattgtcatattaatcattcaatatacttatttattatcataatagtttttatagatacttactgactgtcatttcagtccctatatgaaaagagtta 19464357  T
Q  740 acgtcggcattgagttaatattttaacgtcagagactattt-gactagcaaagtgtataatcaaagactattttaaaatttcaatacatttaaagactat 838  Q
     |||  |||||||| || |||||||  |||||||||||||| ||||| |  |||||  ||||| |||| ||||| ||||||  ||||||| || ||||||    
T  19464356 tcgtgagcattgagatattattttagtgtcagagactattttgactaacggagtgttcaatcagagaccatttttaaattttgatacattgaaggactat 19464257  T
Q  839 tgtgattactcattacacatttaagga 865  Q
    ||||| ||||  |||||||||||||||    
T  19464256 tgtgactacttgttacacatttaagga 19464230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 570 - 656
Target Start/End: Complemental strand, 34177530 - 34177444
Alignment:
Q  570 aaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagt 656  Q
    |||||| |||||| ||| |||||||||| ||| ||| |||||||||||||||| ||||||||||||  |||||||| ||| ||||||    
T  34177530 aaatttcaaaatagtccatgattgtgcattatgttagtcaaaatagtctcttacattaaaatgtttggttaatattttcacattagt 34177444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 794 - 879
Target Start/End: Original strand, 35621581 - 35621666
Alignment:
Q  794 tataatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcattacacatttaaggaataaaaggactatt 879  Q
    |||||| || ||||||||||||| || |||||||||||| ||||||||||  |||| |||||||||||||||  |||| |||||||    
T  35621581 tataattaaggactattttaaaaatttaatacatttaaaaactattgtgacaactcgttacacatttaaggatcaaaatgactatt 35621666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 552 - 708
Target Start/End: Original strand, 2998922 - 2999078
Alignment:
Q  552 tagtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcata 651  Q
    |||||| | |||||||||||||||||||||| | | | ||||| |||| |||||||||||||||| |||  ||||||||| |||  |||||| | | |||    
T  2998922 tagtctgtaaatgtatcaaaattttaaaatagttcataattgtacactttattaatcaaaatagtttctcgtattaaaatattttgttaatacttttata 2999021  T
Q  652 ttagtccctcaatatacgtacttattgtcatatcagtcattataaatacttacttat 708  Q
    | ||| | || |||||  |||||||| || | ||| || ||||||||||||| ||||    
T  2999022 tcagttcgtctatatatttacttattatcttctcaatctttataaatacttatttat 2999078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 557 - 681
Target Start/End: Original strand, 8983971 - 8984095
Alignment:
Q  557 tcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagt 656  Q
    ||||||| |||||||||||||||| | |  || |   |||| ||| ||| |||||||||||||||| ||||||||||||  |||||||| ||| ||||||    
T  8983971 tcttaatatatcaaaattttaaaacaattattaaccatgcattatgttagtcaaaatagtctcttacattaaaatgttttgttaatattctcacattagt 8984070  T
Q  657 ccctcaatatacgtacttattgtca 681  Q
    | || ||||||| || |||||||||    
T  8984071 ctcttaatatacttatttattgtca 8984095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 535 - 686
Target Start/End: Original strand, 10018730 - 10018879
Alignment:
Q  535 taacgagtagtctcaattagtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtt 634  Q
    |||| ||||||| |||| ||||| | |||||||||||||||||||||| ||    |||||| |||| ||   ||||||| |||| |||| ||||||||||    
T  10018730 taaccagtagtcacaat-agtctatcaatgtatcaaaattttaaaatagtcaac-attgtgtactacatctgtcaaaatggtcttttatgttaaaatgtt 10018827  T
Q  635 tctttaatattatcatattagtccctcaatatacgtacttattgtcatatca 686  Q
    || |||||||| |||| ||||| ||||||||||| |||  | ||||||||||    
T  10018828 tcgttaatattgtcatgttagttcctcaatatacctacagaatgtcatatca 10018879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 625 - 687
Target Start/End: Original strand, 12238437 - 12238499
Alignment:
Q  625 ttaaaatgtttctttaatattatcatattagtccctcaatatacgtacttattgtcatatcag 687  Q
    |||||||||||| |||||||| ||||||||||| |||||||||| | | ||||||||||||||    
T  12238437 ttaaaatgtttcgttaatattgtcatattagtctctcaatatacattcatattgtcatatcag 12238499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 559 - 728
Target Start/End: Complemental strand, 38445225 - 38445059
Alignment:
Q  559 ttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtcc 658  Q
    |||||||||| ||||| ||||||| || |||||||||||||   ||||||||| || |||    | ||||||| |||| |||||| |  |||||||  ||    
T  38445225 ttaatgtatcgaaattctaaaatagtctttgattgtgcacttccttaatcaaa-tactcttccgtgttaaaatatttcattaatactgccatatta--cc 38445129  T
Q  659 ctcaatatacgtacttattgtcatatcagtcattataaatacttacttatcgtcatatcaattcatatat 728  Q
    || ||||||| |||||| | |||||||| ||  ||||| ||||||||||| ||||||||||||| |||||    
T  38445128 cttaatatacttacttactatcatatcaatctctataagtacttacttattgtcatatcaattcctatat 38445059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 787 - 859
Target Start/End: Complemental strand, 50155603 - 50155532
Alignment:
Q  787 caaagtgtataatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcattacacatt 859  Q
    ||||||||| ||||||| |||||||||||||||  ||||||| ||| |||||| ||| |||||||||||||||    
T  50155603 caaagtgtacaatcaaaaactattttaaaattttgatacattgaaa-actattatgactactcattacacatt 50155532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 561 - 728
Target Start/End: Original strand, 26515123 - 26515289
Alignment:
Q  561 aatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccct 660  Q
    ||||||| ||||| | |||||| ||| | |||||| | |  |||| |||||||||||||| ||  | ||||||||  ||| |||| |||||||||||| |    
T  26515123 aatgtattaaaatatcaaaatagtccctaattgtgtatttcattagtcaaaatagtctctgatgatgaaatgtttaatta-tattgtcatattagtcctt 26515221  T
Q  661 caatatacgtacttattgtcatatcagtcattataaatacttacttatcgtcatatcaattcatatat 728  Q
    | |||||| || ||||||| |||||| || |||||| ||||||||  | ||||| ||| |||||||||    
T  26515222 cgatatacttaattattgttatatcaatctttataagtacttactcgttgtcatttcagttcatatat 26515289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 759 - 865
Target Start/End: Original strand, 27900887 - 27900994
Alignment:
Q  759 attttaacgtcagagactattt-gactagcaaagtgtataatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcattacaca 857  Q
    ||||||||||||  |||||||| ||||| | || || | ||||| ||||||||||||| |||  ||||||| || ||||||| ||| |||||||||||||    
T  27900887 attttaacgtcatggactatttcgactaactaattgcacaatcatagactattttaaattttttatacattgaaggactattctgactactcattacaca 27900986  T
Q  858 tttaagga 865  Q
    || |||||    
T  27900987 ttcaagga 27900994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 607 - 702
Target Start/End: Complemental strand, 36145058 - 36144963
Alignment:
Q  607 tcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctcaatatacgtacttattgtcatatcagtcattataaatactt 702  Q
    |||||||||||  | || ||||||| |||  |||||||| ||||||||||   ||||||||| || ||||||||||||||||| |||||| |||||    
T  36145058 tcaaaatagtccatgatgttaaaatcttttattaatattgtcatattagtttttcaatatacttagttattgtcatatcagtccttataagtactt 36144963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 805 - 859
Target Start/End: Complemental strand, 2998954 - 2998900
Alignment:
Q  805 actattttaaaatttcaatacatttaaagactattgtgattactcattacacatt 859  Q
    |||||||||||||||  ||||||||| |||||||||||||||||  |||||||||    
T  2998954 actattttaaaattttgatacatttacagactattgtgattacttgttacacatt 2998900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 670 - 780
Target Start/End: Complemental strand, 9777012 - 9776902
Alignment:
Q  670 tacttattgtcatatcagtcattataaatacttacttatcgtcatatcaattcatatataagaagagctaacgtcggcattgagttaatattttaacgtc 769  Q
    |||||||||||||||||| | |||||| |||||| |||| ||||||  ||||| ||||||| ||||  ||| |||  ||||||  || ||||||||  ||    
T  9777012 tacttattgtcatatcagcctttataagtacttatttattgtcatactaattcctatataaaaagaattaatgtcaacattgaaatattattttaatatc 9776913  T
Q  770 agagactattt 780  Q
    |||||||||||    
T  9776912 agagactattt 9776902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 789 - 858
Target Start/End: Complemental strand, 18894684 - 18894615
Alignment:
Q  789 aagtgtataatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcattacacat 858  Q
    |||||||||||||| ||||| ||||||||||| ||| ||| |||||||||| ||| ||||  ||||||||    
T  18894684 aagtgtataatcaacgactactttaaaatttcgatatattcaaagactattatgactacttgttacacat 18894615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 552 - 673
Target Start/End: Complemental strand, 30050657 - 30050536
Alignment:
Q  552 tagtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcata 651  Q
    ||||| ||||||||||| |||||| |||||| ||  ||||| |||| | | ||| |||||||||||||| | |||||||| | || ||||||||  ||||    
T  30050657 tagtcccttaatgtatcgaaatttcaaaatagtctatgattatgcaatttgttagtcaaaatagtctctcacattaaaatatctcgttaatattgacata 30050558  T
Q  652 ttagtccctcaatatacgtact 673  Q
    |||  || ||||||||| ||||    
T  30050557 ttaacccttcaatatacttact 30050536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 559 - 616
Target Start/End: Complemental strand, 46187393 - 46187336
Alignment:
Q  559 ttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagt 616  Q
    ||||| |||||||||||||||||| |  ||||||||||||||| ||||| ||||||||    
T  46187393 ttaatatatcaaaattttaaaataatttttgattgtgcactatgttaattaaaatagt 46187336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 588 - 681
Target Start/End: Complemental strand, 49880256 - 49880163
Alignment:
Q  588 tgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctcaatatacgtacttattgtca 681  Q
    ||||||| ||||  |||| ||||||||||| || | ||||||||  ||| || ||||| |||||||||||  ||||||||| ||||||||||||    
T  49880256 tgattgtacacttcattagtcaaaatagtccctaacattaaaatacttcattgatattgtcatattagtctttcaatatacttacttattgtca 49880163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 795 - 880
Target Start/End: Complemental strand, 50804351 - 50804266
Alignment:
Q  795 ataatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcattacacatttaaggaataaaaggactatta 880  Q
    |||||||  ||||||||||||||||  | ||||| ||||||||||||||  |||| ||||||||| ||||| |||||  |||||||    
T  50804351 ataatcatggactattttaaaattttgacacattcaaagactattgtgaccactcgttacacattcaaggactaaaataactatta 50804266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 557 - 617
Target Start/End: Original strand, 29795099 - 29795159
Alignment:
Q  557 tcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtc 617  Q
    |||||||||||||||||||||||||| |  ||| |||| |||| | |||||||||||||||    
T  29795099 tcttaatgtatcaaaattttaaaatattttttggttgtacacttttttaatcaaaatagtc 29795159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 588 - 667
Target Start/End: Complemental strand, 9777133 - 9777054
Alignment:
Q  588 tgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctcaatata 667  Q
    |||||||||||||||||||||||| ||||   |||  |||||||||||| ||||||||   |||||||||| ||| ||||    
T  9777133 tgattgtgcactatattaatcaaagtagttctttacgttaaaatgtttcgttaatattggtatattagtccttcattata 9777054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 802 - 853
Target Start/End: Original strand, 39162634 - 39162685
Alignment:
Q  802 aagactattttaaaatttcaatacatttaaagactattgtgattactcatta 853  Q
    ||||| ||||||||||||| ||||||| || ||||||||||| |||||||||    
T  39162634 aagaccattttaaaatttcgatacattgaaggactattgtgactactcatta 39162685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 562 - 684
Target Start/End: Complemental strand, 39330253 - 39330130
Alignment:
Q  562 atgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctc 661  Q
    ||||||||||| || || ||| ||| |||||||||| |   ||| | ||||||||||||  | ||||| |||||| |||||||| |||||||||| | ||    
T  39330253 atgtatcaaaacttcaatatagtccatgattgtgcaattcgttagttaaaatagtctctgttgttaaactgtttcattaatattgtcatattagttcttc 39330154  T
Q  662 aatata-cgtacttattgtcatat 684  Q
    ||||||   |||||||||||||||    
T  39330153 aatatattttacttattgtcatat 39330130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 565 - 619
Target Start/End: Complemental strand, 6541321 - 6541267
Alignment:
Q  565 tatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctc 619  Q
    |||||||||||||||||| ||| |||||||||||| | | | |||||||||||||    
T  6541321 tatcaaaattttaaaataatccatgattgtgcactttgtaagtcaaaatagtctc 6541267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 561 - 619
Target Start/End: Complemental strand, 37980463 - 37980405
Alignment:
Q  561 aatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctc 619  Q
    |||||||||||||||||||||| |  ||||||||| || || ||||| |||||||||||    
T  37980463 aatgtatcaaaattttaaaatagtgtttgattgtggaccatgttaattaaaatagtctc 37980405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 797 - 843
Target Start/End: Original strand, 38445192 - 38445238
Alignment:
Q  797 aatcaaagactattttaaaatttcaatacatttaaagactattgtga 843  Q
    ||||||||||||||||| |||||| ||||||| || |||||||||||    
T  38445192 aatcaaagactattttagaatttcgatacattaaaggactattgtga 38445238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 603 - 673
Target Start/End: Complemental strand, 38901715 - 38901645
Alignment:
Q  603 ttaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctcaatatacgtact 673  Q
    |||||||||||||||| |   ||| ||||||||| |||||||| |||||||| || |||||||||| ||||    
T  38901715 ttaatcaaaatagtctttggcattgaaatgtttcattaatattgtcatattaatctctcaatatacttact 38901645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 575 - 656
Target Start/End: Original strand, 3728097 - 3728178
Alignment:
Q  575 ttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagt 656  Q
    |||||||| ||| |||||||| | ||| ||| ||||||||||||||||  ||||||| |||  |||||||| | ||||||||    
T  3728097 ttaaaatagtccatgattgtgtattatgttagtcaaaatagtctcttacgttaaaatattttattaatattgttatattagt 3728178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 778 - 859
Target Start/End: Complemental strand, 8069057 - 8068977
Alignment:
Q  778 tttgactagcaaagtgtataatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcattacacatt 859  Q
    |||||||| ||||||| | |||||   ||||||||| ||||| |||||||| ||| ||||||||||||| || |||||||||    
T  8069057 tttgactaacaaagtgcaaaatcatgaactattttagaattttaatacattgaaa-actattgtgattattcgttacacatt 8068977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 759 - 859
Target Start/End: Original strand, 8679270 - 8679370
Alignment:
Q  759 attttaacgtcagagactatt-tgactagcaaagtgtataatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcattacaca 857  Q
    |||||||||| ||||| |||| ||||||  | |||||||||| ||||||||||||||| |||| ||| ||| || ||| ||||| ||| ||| |||||||    
T  8679270 attttaacgtaagagattattatgactaaaatagtgtataattaaagactattttaaattttcgatatattgaaggac-attgttattgctcgttacaca 8679368  T
Q  858 tt 859  Q
    ||    
T  8679369 tt 8679370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 577 - 634
Target Start/End: Original strand, 8791688 - 8791745
Alignment:
Q  577 aaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtt 634  Q
    |||||| || ||||||||||||| | |||||||||||||||||||   ||||||||||    
T  8791688 aaaatagtcgttgattgtgcactcttttaatcaaaatagtctcttgcgttaaaatgtt 8791745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 552 - 617
Target Start/End: Original strand, 14926327 - 14926392
Alignment:
Q  552 tagtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtc 617  Q
    |||||||| ||||||| |||||||||||||| |   |||||||||||||| ||| ||||| |||||    
T  14926327 tagtctctgaatgtatgaaaattttaaaatagttactgattgtgcactatgttagtcaaagtagtc 14926392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 587 - 660
Target Start/End: Complemental strand, 31134752 - 31134679
Alignment:
Q  587 ttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccct 660  Q
    ||||||||||||||| ||||||||||||||| || |  |||||||||| | | |||| || ||||| |||||||    
T  31134752 ttgattgtgcactatgttaatcaaaatagtccctcacgttaaaatgttccgtaaatactagcatatcagtccct 31134679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 797 - 882
Target Start/End: Complemental strand, 36144868 - 36144783
Alignment:
Q  797 aatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcattacacatttaaggaataaaaggactattatc 882  Q
    ||||||||| ||||||  |||||  |||||||   ||| |||||||||||||||||||| ||| |||||  |||| ||||||||||    
T  36144868 aatcaaagattattttggaattttgatacattgggagagtattgtgattactcattacatattcaaggaccaaaatgactattatc 36144783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 602 - 679
Target Start/End: Complemental strand, 50155788 - 50155711
Alignment:
Q  602 attaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctcaatatacgtacttattgt 679  Q
    |||| ||||||||||| || ||||||||||||||| |||||||| || ||| | | | |||||| || ||||||||||    
T  50155788 attagtcaaaatagtcactgatattaaaatgtttcattaatattgtcctatcaatgcttcaatacacttacttattgt 50155711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 788 - 845
Target Start/End: Complemental strand, 52361992 - 52361935
Alignment:
Q  788 aaagtgtataatcaaagactattttaaaatttcaatacatttaaagactattgtgatt 845  Q
    |||||| | ||||| ||||||||||||||||| |||||||| ||| ||| ||||||||    
T  52361992 aaagtgcaaaatcagagactattttaaaattttaatacattaaaacactgttgtgatt 52361935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 1e-28; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 552 - 728
Target Start/End: Complemental strand, 10067784 - 10067607
Alignment:
Q  552 tagtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcata 651  Q
    |||||||| |||||||| ||||||||||||| ||  |||||||| | | | |||||||||||||||||| | ||||||||  ||  |||||||| |||||    
T  10067784 tagtctctcaatgtatcgaaattttaaaatagtctctgattgtgtattttgttaatcaaaatagtctctgacattaaaatactttgttaatattgtcata 10067685  T
Q  652 ttagtccctcaatatacgtactta-ttgtcatatcagtcattataaatacttacttatcgtcatatcaattcatatat 728  Q
    ||||||  ||||||||| |||||| |||||||||||||| |||||| |||||||| || ||||| ||| ||| |||||    
T  10067684 ttagtcattcaatatacttacttatttgtcatatcagtccttataattacttactaattgtcatttcagttcttatat 10067607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 554 - 696
Target Start/End: Complemental strand, 31315343 - 31315202
Alignment:
Q  554 gtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatatt 653  Q
    |||||||||||||| |||||||||||||| || ||||||||||||||| ||| | ||||||| |||||| |||||||| ||||||| ||||| |||||||    
T  31315343 gtctcttaatgtattaaaattttaaaatagtctttgattgtgcactatgttagt-aaaatagactcttacattaaaatatttctttcatattgtcatatt 31315245  T
Q  654 agtccctcaatatacgtacttattgtcatatcagtcattataa 696  Q
    | |   ||||||||| || ||||| ||||||||||| ||||||    
T  31315244 aatatttcaatatacttatttattatcatatcagtctttataa 31315202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 535 - 692
Target Start/End: Complemental strand, 9436819 - 9436663
Alignment:
Q  535 taacgagtagtctcaattagtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtt 634  Q
    |||||||||||| |||| ||||||| |||| ||| ||||||||||||| ||  |||||||||||||| ||| ||| |||||||  |||| ||||||| ||    
T  9436819 taacgagtagtcacaat-agtctctcaatggatcgaaattttaaaatagtcactgattgtgcactatgttattcagaatagtcatttatgttaaaatatt 9436721  T
Q  635 tctttaatattatcatattagtccctcaatatacgtacttattgtcatatcagtcatt 692  Q
    |  |||||||| ||||||||||||| |||||||| || ||||| |||||||| |||||    
T  9436720 ttgttaatattgtcatattagtcccgcaatatacttatttattatcatatcaatcatt 9436663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 552 - 880
Target Start/End: Original strand, 515770 - 516098
Alignment:
Q  552 tagtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcata 651  Q
    |||| ||| |||||||||||||||||||||| ||| |  ||||| ||||| ||| |  ||||||||  | | ||||||||||  | |||||||| |||||    
T  515770 tagtatctcaatgtatcaaaattttaaaatagtccctagttgtgtactatgttagttgaaatagtcattgacattaaaatgta-cgttaatattgtcata 515868  T
Q  652 ttagtccctcaatatacgtacttattgtcatatcagtcattataaatacttacttatcgtcatatcaattcatatataagaagagctaacgtcggcattg 751  Q
    ||||||||||| ||||| |  || || |||||||||||||||||| ||||||||||| ||||||||| ||  ||||| | ||||| ||| |||   ||||    
T  515869 ttagtccctcattatacttgtttgttatcatatcagtcattataagtacttacttattgtcatatcagtttctatatgaaaagagttaatgtcaatattg 515968  T
Q  752 agttaatattttaacgtcagagacta-tttgactagcaaagtgtataatcaaagactattttaaaatttcaatacatttaaagactattgtgattactca 850  Q
    ||  |  || ||||| |||||||||| |||||||| | ||||| | |||||  |||||||||  |||||| ||||||  |   ||| |||||| |||||     
T  515969 agggaccatcttaacatcagagactattttgactaacgaagtgcacaatcattgactattttggaatttcgatacatcaagttactgttgtgactactcg 516068  T
Q  851 ttacacatttaaggaataaaaggactatta 880  Q
    ||||||||| | |||  |||| ||||||||    
T  516069 ttacacattcagggaccaaaatgactatta 516098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 560 - 705
Target Start/End: Complemental strand, 9762668 - 9762523
Alignment:
Q  560 taatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccc 659  Q
    ||||||||||||||||||||||| |  ||||||||||||||||||| ||||||| ||||||| | ||||||||| ||  |||||||||||||| | ||||    
T  9762668 taatgtatcaaaattttaaaatagtttttgattgtgcactatattagtcaaaatggtctcttctgttaaaatgtctcgctaatattatcatatcaatccc 9762569  T
Q  660 tcaatatacgtacttattgtcatatcagtcattataaatacttact 705  Q
    | ||| |||  | ||||| |||||||  ||||||||| || |||||    
T  9762568 ttaatgtactcagttattatcatatcgatcattataagtatttact 9762523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 559 - 714
Target Start/End: Complemental strand, 21021149 - 21020998
Alignment:
Q  559 ttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtcc 658  Q
    |||| ||||||||||||||||||| |  |||||| |||| | ||||| |||||||||||  | | |||||||| |||| ||| |||||||||||||||||    
T  21021149 ttaaagtatcaaaattttaaaatagttattgattatgcattttattagtcaaaatagtcattaacattaaaatatttcgttattattatcatattagtcc 21021050  T
Q  659 ctcaatatacgtacttattgtcatatcagtcattataaatacttacttatcgtcat 714  Q
     ||||||    |||||||| ||||||| ||| |||||| ||||||||||| |||||    
T  21021049 ttcaata----tacttattatcatatcggtctttataagtacttacttattgtcat 21020998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 607 - 728
Target Start/End: Complemental strand, 16431665 - 16431544
Alignment:
Q  607 tcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctcaatatacgtacttattgtcatatcagtcattataaatacttactt 706  Q
    |||||||||||||| | ||||||||  |||  ||||||| |||||||||||  ||||||||| |||||||||||||||||||| ||  || |||||||||    
T  16431665 tcaaaatagtctctaacattaaaataattcactaatattgtcatattagtcattcaatatacttacttattgtcatatcagtccttcaaattacttactt 16431566  T
Q  707 atcgtcatatcaattcatatat 728  Q
    || ||||| ||||| |||||||    
T  16431565 attgtcatttcaatccatatat 16431544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 558 - 677
Target Start/End: Complemental strand, 25085142 - 25085023
Alignment:
Q  558 cttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtc 657  Q
    |||||||||||||||||||||||||||  ||||||||||||| | ||| |||||||||||| | | ||||||||  ||  |||||||| |||||||| ||    
T  25085142 cttaatgtatcaaaattttaaaatactttttgattgtgcactttgttagtcaaaatagtctttaacattaaaataatttgttaatattgtcatattattc 25085043  T
Q  658 cctcaatatacgtacttatt 677  Q
      ||||||||| ||||||||    
T  25085042 tttcaatatacttacttatt 25085023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 756 - 880
Target Start/End: Complemental strand, 33806775 - 33806650
Alignment:
Q  756 aatattttaacgtcagagacta-tttgactagcaaagtgtataatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcattac 854  Q
    ||||||||||||| |||||||| |||||||| ||||||  |||||||| |||||||||| |||||| ||||||| || || |||||||| ||||| ||||    
T  33806775 aatattttaacgttagagactattttgactaacaaagtacataatcaatgactattttagaatttcgatacattaaaggattattgtgactactccttac 33806676  T
Q  855 acatttaaggaataaaaggactatta 880  Q
    ||||| | ||| |||||  |||||||    
T  33806675 acattcatggactaaaataactatta 33806650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 561 - 696
Target Start/End: Complemental strand, 33551139 - 33551003
Alignment:
Q  561 aatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccc- 659  Q
    |||||||||||||||||||||| |   |||||||||| |   ||| |||||||| | ||| || || ||||||||||||||||||||||||||||||||     
T  33551139 aatgtatcaaaattttaaaatattatctgattgtgcatttcgttagtcaaaataatttctgatgttgaaatgtttctttaatattatcatattagtccct 33551040  T
Q  660 tcaatatacgtacttattgtcatatcagtcattataa 696  Q
    ||| ||||| || ||||||| |||| |||| ||||||    
T  33551039 tcagtatacttatttattgttatattagtccttataa 33551003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 508 - 714
Target Start/End: Original strand, 10219537 - 10219737
Alignment:
Q  508 taatagtcattttggttctcttatgtttaacgagtagtctcaattagtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaat 607  Q
    |||||||||||||||| |    |||| |||||||||| | |||| |||| |||||||| || |||||| |||||| | | |||||||||||| | ||| |    
T  10219537 taatagtcattttggtccctgaatgtgtaacgagtagccacaat-agtcccttaatgtgtcgaaatttcaaaatagttcctgattgtgcactttgttagt 10219635  T
Q  608 caaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctcaatatacgtacttattgtcatatcagtcattataaatacttactta 707  Q
    ||||||||||||| |  |||||||  ||| |||||||| ||||| |||||| | | ||    |||||||||||||||||||| |||||| || |||||||    
T  10219636 caaaatagtctctgacgttaaaataattcgttaatattgtcata-tagtcctttagta----tacttattgtcatatcagtctttataagtatttactta 10219730  T
Q  708 tcgtcat 714  Q
    | |||||    
T  10219731 ttgtcat 10219737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 758 - 880
Target Start/End: Original strand, 10067704 - 10067827
Alignment:
Q  758 tattttaacgtcagagactattt-gactagcaaagtgtataatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcattacac 856  Q
    |||||||| |||||||||||||| || || |||| |  | ||||| |||||||||||||||||| ||||||| | ||||||||||| |||||  ||||||    
T  10067704 tattttaatgtcagagactattttgattaacaaaatacacaatcagagactattttaaaatttcgatacattgagagactattgtggttacttgttacac 10067803  T
Q  857 atttaaggaataaaaggactatta 880  Q
    ||| || || ||||| ||||||||    
T  10067804 attcaaagactaaaatgactatta 10067827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 778 - 865
Target Start/End: Original strand, 19264726 - 19264812
Alignment:
Q  778 tttgactagcaaagtgtataatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcattacacatttaagga 865  Q
    |||||||| || |||| ||||||| |||||||||||||||||| ||||| ||| |||||||||||| ||||| ||||||||| |||||    
T  19264726 tttgactaacatagtgcataatcagagactattttaaaatttcgataca-ttagagactattgtgactactcgttacacattcaagga 19264812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 625 - 703
Target Start/End: Original strand, 3711309 - 3711387
Alignment:
Q  625 ttaaaatgtttctttaatattatcatattagtccctcaatatacgtacttattgtcatatcagtcattataaatactta 703  Q
    |||||||||||| |||||||| |||||||||| ||||||||||  || ||| ||| ||||||||| |||||||||||||    
T  3711309 ttaaaatgtttcgttaatattgtcatattagttcctcaatatatttatttaatgttatatcagtccttataaatactta 3711387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 558 - 684
Target Start/End: Original strand, 6699438 - 6699563
Alignment:
Q  558 cttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtc 657  Q
    ||||||||||| ||||||||||||| ||  |||||||||  ||| ||| ||||| || ||| |||  ||||||| |||| ||| |||| | |||||||||    
T  6699438 cttaatgtatcgaaattttaaaataatcgctgattgtgctatatgttattcaaa-taatcttttacgttaaaatatttcattagtattgtgatattagtc 6699536  T
Q  658 cctcaatatacgtacttattgtcatat 684  Q
    | ||||||||||||||||| |||||||    
T  6699537 catcaatatacgtacttatggtcatat 6699563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 602 - 839
Target Start/End: Original strand, 31142009 - 31142247
Alignment:
Q  602 attaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctcaatatacgtacttattgtcatatcagtcattataaatact 701  Q
    ||||||||| ||||||  | ||||||||||  ||| |||||||| |||||| ||| | ||||||||  |||||||||||||| ||||| | |||| ||||    
T  31142009 attaatcaatatagtccatgatattaaaatacttcattaatattgtcatatcagtacttcaatatatttacttattgtcataccagtcttaataagtact 31142108  T
Q  702 tacttatcgtcatatcaattcatatataagaagagctaacgtcggcattgagttaatattttaacgtcagagacta-tttgactagcaaagtgtataatc 800  Q
    |  |||| | ||| ||||| ||||||| | ||||  ||  || || |||||   | ||||||| |  || |||||| |||||||| || |||||| ||||    
T  31142109 tttttattgacatttcaatccatatatgaaaagacttatggtgggtattgaaagattattttagctccacagactattttgactaacagagtgtagaatc 31142208  T
Q  801 aaagactattttaaaatttcaatacatttaaagactatt 839  Q
    |||||||||||| ||||||  ||| ||| ||||||||||    
T  31142209 aaagactattttgaaattttgatatattaaaagactatt 31142247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 589 - 684
Target Start/End: Original strand, 34937509 - 34937604
Alignment:
Q  589 gattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctcaatatacgtacttattgtcatat 684  Q
    ||||||||||||  ||| |||||||| | |||||  |||||||||||| |||||||| ||||||| |||| ||| ||||  |||||||||||||||    
T  34937509 gattgtgcactaagttagtcaaaataatatcttacgttaaaatgtttcattaatattttcatattggtccttcagtatatttacttattgtcatat 34937604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 561 - 651
Target Start/End: Complemental strand, 4964342 - 4964252
Alignment:
Q  561 aatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcata 651  Q
    ||||||| |||||||||||||| ||  | ||| |||||| ||||| |||||||||| | | ||||||||||| ||| ||||||||||||||    
T  4964342 aatgtattaaaattttaaaatagtcaataattatgcactttattagtcaaaatagtttttgatattaaaatgcttcattaatattatcata 4964252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 576 - 652
Target Start/End: Complemental strand, 7515672 - 7515596
Alignment:
Q  576 taaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatat 652  Q
    ||||||| || |||||| |||| ||| ||| |||||||| ||||||  ||||||||||||| |||||||||||||||    
T  7515672 taaaatagtcattgattatgcattatcttagtcaaaatactctcttgcattaaaatgtttcattaatattatcatat 7515596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 756 - 828
Target Start/End: Original strand, 31315264 - 31315336
Alignment:
Q  756 aatattttaacgtcagagactatttgactagcaaagtgtataatcaaagactattttaaaatttcaatacatt 828  Q
    |||||||||| || |||| |||||| |||| || |||| | ||||||||||||||||||||||| ||||||||    
T  31315264 aatattttaatgtaagagtctattttactaacatagtgcacaatcaaagactattttaaaattttaatacatt 31315336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 758 - 880
Target Start/End: Complemental strand, 10219660 - 10219537
Alignment:
Q  758 tattttaacgtcagagacta-tttgactagcaaagtgtataatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcattacac 856  Q
    |||||||||||||||||||| |||||||| ||||||| | |||||   |||||||| ||||||| | ||||| |  ||||||||||  ||||| ||||||    
T  10219660 tattttaacgtcagagactattttgactaacaaagtgcacaatcaggaactattttgaaatttcgacacattaagggactattgtggctactcgttacac 10219561  T
Q  857 atttaaggaataaaaggactatta 880  Q
    ||| | |||  |||| ||||||||    
T  10219560 attcagggaccaaaatgactatta 10219537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 530 - 617
Target Start/End: Complemental strand, 19264805 - 19264720
Alignment:
Q  530 atgtttaacgagtagtctcaattagtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtc 617  Q
    |||| |||||||||||| |||| ||||||| |||||||| ||||||||||||| ||  ||||| |||||||| ||| |||||||||||    
T  19264805 atgtgtaacgagtagtcacaat-agtctct-aatgtatcgaaattttaaaatagtctctgattatgcactatgttagtcaaaatagtc 19264720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 504 - 614
Target Start/End: Original strand, 25084899 - 25085008
Alignment:
Q  504 gagataatagtcattttggttctcttatgtttaacgagtagtctcaattagtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatat 603  Q
    ||||||||||| |||||||| ||   |||| |||||||||||   ||| ||||||||||||||| |||||||| ||||| || || ||| |||| | |||    
T  25084899 gagataatagttattttggtccttggatgtataacgagtagttataat-agtctcttaatgtattaaaatttttaaatagtctttaattttgcattttat 25084997  T
Q  604 taatcaaaata 614  Q
    |||||||||||    
T  25084998 taatcaaaata 25085008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 611 - 688
Target Start/End: Original strand, 3314725 - 3314801
Alignment:
Q  611 aatagtctcttatattaaaatgtttctttaatattatcatattagtccctcaatatacgtacttattgtcatatcagt 688  Q
    |||||||| ||  ||||||||||||  |||||||| |||||| ||||| ||||||||| |||||||||| ||||||||    
T  3314725 aatagtcttttgcattaaaatgttttgttaatattgtcatatcagtcc-tcaatatacttacttattgttatatcagt 3314801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 561 - 690
Target Start/End: Complemental strand, 9307517 - 9307389
Alignment:
Q  561 aatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccct 660  Q
    |||||||  ||||||||||||| ||| ||| |||||| |  |||  || |||||||| || | ||||||||  ||| |||| ||| |||||||||||| |    
T  9307517 aatgtattgaaattttaaaatagtccctgaatgtgcatttcatttgtc-aaatagtccctgacattaaaataattcattaacattgtcatattagtcctt 9307419  T
Q  661 caatatacgtacttattgtcatatcagtca 690  Q
    |||||||| |||||||| |||| |||||||    
T  9307418 caatatacttacttattttcatttcagtca 9307389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 787 - 828
Target Start/End: Original strand, 12291644 - 12291685
Alignment:
Q  787 caaagtgtataatcaaagactattttaaaatttcaatacatt 828  Q
    ||||||||| ||||||||||||||||||||||| ||||||||    
T  12291644 caaagtgtacaatcaaagactattttaaaattttaatacatt 12291685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 603 - 684
Target Start/End: Complemental strand, 29927735 - 29927654
Alignment:
Q  603 ttaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctcaatatacgtacttattgtcatat 684  Q
    ||||| |||||||| | ||||||||||||||||  || ||||| |||||||||| | |||||| || || ||||||||||||    
T  29927735 ttaataaaaatagtattttatattaaaatgttttgttgatattgtcatattagttcttcaataaacttatttattgtcatat 29927654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 778 - 882
Target Start/End: Original strand, 20565776 - 20565879
Alignment:
Q  778 tttgactagcaaagtgtataatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcattacacatttaaggaataaaaggacta 877  Q
    |||||||||| ||||| | ||||| |||||||||||||| ||| ||||||| |  ||||||| ||| ||||| || | |||| |||||| |||| |||||    
T  20565776 tttgactagcgaagtggacaatcagagactattttaaaaattcgatacattgatggactattatgactactcgttgc-cattcaaggaacaaaatgacta 20565874  T
Q  878 ttatc 882  Q
    |||||    
T  20565875 ttatc 20565879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 565 - 652
Target Start/End: Complemental strand, 12278310 - 12278223
Alignment:
Q  565 tatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatat 652  Q
    ||||||||||||| |||| || |||||| |  | ||| ||| ||||||| ||||||||  |||||||||||| |||||||| ||||||    
T  12278310 tatcaaaattttataatagtctttgattttctattatgttagtcaaaattgtctcttacgttaaaatgtttcgttaatattgtcatat 12278223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 639 - 714
Target Start/End: Original strand, 23887621 - 23887696
Alignment:
Q  639 taatattatcatattagtccctcaatatacgtacttattgtcatatcagtcattataaatacttacttatcgtcat 714  Q
    ||||||| |||||||||||| ||||||||  | |||||| ||||||||||  |||||| |||||| |||| |||||    
T  23887621 taatattgtcatattagtccttcaatataattgcttattttcatatcagttcttataagtacttatttattgtcat 23887696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 638 - 681
Target Start/End: Complemental strand, 26293528 - 26293485
Alignment:
Q  638 ttaatattatcatattagtccctcaatatacgtacttattgtca 681  Q
    ||||||||||||||||||||  ||||||||| ||||||||||||    
T  26293528 ttaatattatcatattagtcattcaatatacatacttattgtca 26293485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 569 - 708
Target Start/End: Complemental strand, 34205327 - 34205188
Alignment:
Q  569 aaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctcaatatac 668  Q
    ||||||| |||||| ||| | |||||| | ||| ||| |||||||||| | |||  ||||||| |||| |||||||| | |||| |  |||  ||||| |    
T  34205327 aaaatttcaaaatagtccataattgtggaatatgttagtcaaaatagttttttacgttaaaatatttcgttaatattgttatatgaaccccataatatgc 34205228  T
Q  669 gtacttattgtcatatcagtcattataaatacttacttat 708  Q
     || ||||||||||||| || |||||||||||||| ||||    
T  34205227 ttatttattgtcatatcggttattataaatacttatttat 34205188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 561 - 599
Target Start/End: Original strand, 22260415 - 22260453
Alignment:
Q  561 aatgtatcaaaattttaaaatactccttgattgtgcact 599  Q
    |||||||||||||||||||||| || |||||||||||||    
T  22260415 aatgtatcaaaattttaaaatagtcattgattgtgcact 22260453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 613 - 699
Target Start/End: Original strand, 24285079 - 24285165
Alignment:
Q  613 tagtctcttatattaaaatgtttctttaatattatcatattagtccctcaatatacgtacttattgtcatatcagtcattataaata 699  Q
    |||||| | |||||||| | |||  |||||||| |||||||| ||  | ||||||| |||||||| ||||||||||| |||||||||    
T  24285079 tagtctatgatattaaactattttgttaatattgtcatattaatcatttaatatacttacttattatcatatcagtccttataaata 24285165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 758 - 859
Target Start/End: Original strand, 25085068 - 25085170
Alignment:
Q  758 tattttaacgtcagagactattt-gactagcaaagtgtataatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcattacac 856  Q
    |||||||| || | ||||||||| ||||| ||||||| | ||||||| | |||||||||||||  ||||||| |   |||||| ||||||||| ||||||    
T  25085068 tattttaatgttaaagactattttgactaacaaagtgcacaatcaaaaagtattttaaaattttgatacattaaggtactattatgattactccttacac 25085167  T
Q  857 att 859  Q
    |||    
T  25085168 att 25085170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 758 - 846
Target Start/End: Original strand, 28995518 - 28995606
Alignment:
Q  758 tattttaacgtcagagactattt-gactagcaaagtgtataatcaaagactattttaaaatttcaatacatttaaagactattgtgatta 846  Q
    |||||||| || ||| ||||||| ||||| | ||||  ||||||||| | ||||||||||||||||||| || ||||| |||||||||||    
T  28995518 tattttaatgttagaaactattttgactaacgaagtaaataatcaaatattattttaaaatttcaatacgttaaaaga-tattgtgatta 28995606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 1e-25; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 560 - 656
Target Start/End: Complemental strand, 33598391 - 33598295
Alignment:
Q  560 taatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagt 656  Q
    ||||||||||||||||||||||| || |||||| | |||||||||| |||||||| | |||||||||||||||||||||||||||| ||| ||||||    
T  33598391 taatgtatcaaaattttaaaatagtcgttgattatacactatattagtcaaaataatttcttatattaaaatgtttctttaatattgtcacattagt 33598295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 561 - 705
Target Start/End: Original strand, 14468821 - 14468962
Alignment:
Q  561 aatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccct 660  Q
    |||||||| |||||| |||||| ||||| |||||||||||| ||||||||||||||||||||| || || |||||| |||||||| |||||| | |||||    
T  14468821 aatgtatcgaaatttcaaaatagtccttaattgtgcactatgttaatcaaaatagtctcttatgtt-aattgtttcgttaatattgtcatataaatccct 14468919  T
Q  661 caatatacgtacttattgtcatatcagtcattataaatacttact 705  Q
    |  ||||  ||||||||||||||||  || ||||||||| |||||    
T  14468920 c--tatatttacttattgtcatatcgatctttataaatatttact 14468962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 588 - 859
Target Start/End: Original strand, 27001195 - 27001471
Alignment:
Q  588 tgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctcaatatacgtacttattgtcatatcag 687  Q
    |||||||||| | | ||| |||||||||||| | || |||||||  ||| |||||||| ||||||||  || ||||||||| ||||||||||||||||||    
T  27001195 tgattgtgcaatttgttagtcaaaatagtctttgatgttaaaatacttcattaatattgtcatattaccccgtcaatatacttacttattgtcatatcag 27001294  T
Q  688 tcattataaatacttacttatcgtcatatcaattcatatataagaagagctaacgt---cgg-cattgagttaatattttaacgtcagagactattt-ga 782  Q
    || ||||||||||||| |||| ||||| | ||| | ||||| | ||||| ||  ||   ||  |||||||  | || |||| || ||||||| |||| ||    
T  27001295 tctttataaatacttaattattgtcattttaatccttatatgaaaagagttattgtgaacgtacattgagagattactttagcgccagagaccattttga 27001394  T
Q  783 ctagcaaagtgtataatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcattacacatt 859  Q
     || || |||| | ||||| |||||||||||||||||  ||| ||  | |||||||||||| |||||||||||||||    
T  27001395 gtaacagagtgcacaatcagagactattttaaaattttgatatatcgagagactattgtgactactcattacacatt 27001471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 561 - 686
Target Start/End: Complemental strand, 917212 - 917087
Alignment:
Q  561 aatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccct 660  Q
    |||||||| ||||||||||||| || |||||||| |||| |||| ||||||||||||||| | | |||||| |||  |||||||| |||||||||||  |    
T  917212 aatgtatcgaaattttaaaatagtctttgattgtacactttatttatcaaaatagtctctcacaataaaatattttgttaatattgtcatattagtcatt 917113  T
Q  661 caatatacgtacttattgtcatatca 686  Q
    |||||||  || || |||||||||||    
T  917112 caatatatttattttttgtcatatca 917087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 552 - 859
Target Start/End: Original strand, 26675047 - 26675354
Alignment:
Q  552 tagtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcata 651  Q
    |||||| |||||||||||||||||||||||| ||  | ||| || | | | ||| |||||||| |   | || ||||||| |||| |||||||| |||||    
T  26675047 tagtctattaatgtatcaaaattttaaaataatctcttattatgtattttgttagtcaaaataattcataatgttaaaatatttcattaatattgtcata 26675146  T
Q  652 ttagtccctcaatatacgtacttattgtcatatcagtcattataaatacttacttatcgtcatatcaattcatatataagaagagctaacgtcggcattg 751  Q
    | ||||| ||||||||| || ||||||||||||||||  |||||| || ||| |||| ||||| ||| |  |||| | | ||||| |   || |||||||    
T  26675147 t-agtccttcaatatacttatttattgtcatatcagttcttataagtatttatttattgtcatttcagtctatatgtgaaaagagtttttgtaggcattg 26675245  T
Q  752 agttaatattttaacgtcagagactattt-gactagcaaagtgtataatcaaagactattttaaaatttcaatacatttaaagactattgtgattactca 850  Q
    |   | |||||||  |||| ||||||||| || || || | || | ||||||||||||||||| ||| |  ||||||| ||||| ||||||||||| |||    
T  26675246 aaagattattttagtgtcatagactattttgagtaacagaatgcacaatcaaagactattttagaatattgatacattaaaagattattgtgattagtca 26675345  T
Q  851 ttacacatt 859  Q
    |||||||||    
T  26675346 ttacacatt 26675354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 552 - 859
Target Start/End: Original strand, 26946655 - 26946962
Alignment:
Q  552 tagtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcata 651  Q
    |||||| |||||||||||||||||||||||| ||  | ||| || | | | ||| |||||||| |   | || ||||||| |||| |||||||| |||||    
T  26946655 tagtctattaatgtatcaaaattttaaaataatctcttattatgtattttgttagtcaaaataattcataatgttaaaatatttcattaatattgtcata 26946754  T
Q  652 ttagtccctcaatatacgtacttattgtcatatcagtcattataaatacttacttatcgtcatatcaattcatatataagaagagctaacgtcggcattg 751  Q
    | ||||| ||||||||| || ||||||||||||||||  |||||| || ||| |||| ||||| ||| |  |||| | | ||||| |   || |||||||    
T  26946755 t-agtccttcaatatacttatttattgtcatatcagttcttataagtatttatttattgtcatttcagtctatatgtgaaaagagtttttgtaggcattg 26946853  T
Q  752 agttaatattttaacgtcagagactattt-gactagcaaagtgtataatcaaagactattttaaaatttcaatacatttaaagactattgtgattactca 850  Q
    |   | |||||||  |||| ||||||||| || || || | || | ||||||||||||||||| ||| |  ||||||| ||||| ||||||||||| |||    
T  26946854 aaagattattttagtgtcatagactattttgagtaacagaatgcacaatcaaagactattttagaatattgatacattaaaagattattgtgattagtca 26946953  T
Q  851 ttacacatt 859  Q
    |||||||||    
T  26946954 ttacacatt 26946962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 559 - 819
Target Start/End: Complemental strand, 8206349 - 8206088
Alignment:
Q  559 ttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtcc 658  Q
    |||||||||| |||||||| |||| ||| ||| ||||||||  |||| |||||||||||  | | |  |||||  ||| |||||||| |||||||| |||    
T  8206349 ttaatgtatcgaaattttataatagtccctgaatgtgcacttcattagtcaaaatagtccttgacaacaaaataattcattaatattgtcatattaatcc 8206250  T
Q  659 ctcaatatacgtacttattgtcatatcagtcattataaatacttacttatcgtcatatcaattcatatataagaagagctaacgtcggcattgagttaat 758  Q
     ||||||||| |||||||| |||||| | || |||||| ||| |||| || ||||| | | |   ||||| | | ||| |   || || ||||||  | |    
T  8206249 ttcaatatacttacttattatcatatgaatccttataagtacctactaattgtcattttagtctctatatgaaatgagtttttgtgggtattgagaaatt 8206150  T
Q  759 attttaacgtcagagactattt-gactagcaaagtgtataatcaaagactattttaaaattt 819  Q
    |||||||||||||||||||||| || || ||| ||| | |||||||||||||||||||||||    
T  8206149 attttaacgtcagagactattttgattaacaatgtgcacaatcaaagactattttaaaattt 8206088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 561 - 713
Target Start/End: Original strand, 463181 - 463332
Alignment:
Q  561 aatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccct 660  Q
    |||||||||||||||| ||||| |   |||||||| ||||| ||| | ||||||||| ||||  |||||| ||||  |||||||  ||| ||||||||||    
T  463181 aatgtatcaaaattttgaaatagtatctgattgtg-actatgttagttaaaatagtcccttacgttaaaaagttttgttaatatagtcacattagtccct 463279  T
Q  661 caatatacgtacttattgtcatatcagtcattataaatacttacttatcgtca 713  Q
    |||||||| ||||||||  ||||| |||| |||||| || ||||||| |||||    
T  463280 caatatacttacttattaccatataagtccttataagtatttacttaccgtca 463332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 625 - 713
Target Start/End: Original strand, 3709306 - 3709394
Alignment:
Q  625 ttaaaatgtttctttaatattatcatattagtccctcaatatacgtacttattgtcatatcagtcattataaatacttacttatcgtca 713  Q
    |||||||||||| |||||||| | ||||||||||||||| |||| ||||||| || |||||||||  | ||||||||||||||| ||||    
T  3709306 ttaaaatgtttcattaatattgtaatattagtccctcaacatacttacttatggttatatcagtccatgtaaatacttacttattgtca 3709394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 533 - 668
Target Start/End: Original strand, 13200581 - 13200715
Alignment:
Q  533 tttaacgagtagtctcaattagtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctctt-atattaaaat 631  Q
    ||||||||||||||  ||| ||||||||||| |||| ||||||||||||| | | | ||| || ||||| ||| ||||||||  ||||| |  |||||||    
T  13200581 tttaacgagtagtcataat-agtctcttaatatatctaaattttaaaataattcctcattatgtactatgttagtcaaaataa-ctctttacgttaaaat 13200678  T
Q  632 gtttctttaatattatcatattagtccctcaatatac 668  Q
    ||||| |||||||||||||||||||||||| ||||||    
T  13200679 gtttcgttaatattatcatattagtccctcgatatac 13200715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 641 - 728
Target Start/End: Complemental strand, 14460126 - 14460039
Alignment:
Q  641 atattatcatattagtccctcaatatacgtacttattgtcatatcagtcattataaatacttacttatcgtcatatcaattcatatat 728  Q
    ||||| |||||||||||| ||||||||  ||||||||||||||||||| |||||| |||||||||||   |||| ||| |||||||||    
T  14460126 atattgtcatattagtccttcaatatatttacttattgtcatatcagttattatatatacttacttaatatcatttcagttcatatat 14460039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 570 - 708
Target Start/End: Complemental strand, 12403342 - 12403204
Alignment:
Q  570 aaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctcaatatacg 669  Q
    ||||||||||||| || |||||||| || | ||||| ||||||||||| || |||||| |||| ||| |||||||||| |||  | ||  | |||||||     
T  12403342 aaattttaaaatagtctttgattgtccattttattactcaaaatagtccctgatattagaatgattcattaatattatgataccaatcttttaatatacc 12403243  T
Q  670 tacttattgtcatatcagtcattataaatacttacttat 708  Q
     || ||||||||||||| || ||||||||| ||||||||    
T  12403242 cacgtattgtcatatcaatccttataaatatttacttat 12403204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 607 - 730
Target Start/End: Original strand, 7313982 - 7314105
Alignment:
Q  607 tcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctcaatatacgtacttattgtcata-tcagtcattataaatacttact 705  Q
    ||||||||||| || ||||| |||| |||| |||||||| ||||||| |||||| ||||||| || ||||||||||| ||  ||  ||||||||||||||    
T  7313982 tcaaaatagtccctcatatttaaatatttcgttaatattgtcatattggtcccttaatatacttatttattgtcatattctatc-gtataaatacttact 7314080  T
Q  706 tatcgtcatatcaattcatatataa 730  Q
    ||| ||||||| | ||| |||||||    
T  7314081 tattgtcatattagttcttatataa 7314105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 584 - 666
Target Start/End: Original strand, 2707656 - 2707737
Alignment:
Q  584 tccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctcaatat 666  Q
    |||||||||||  | ||||||| ||||||| |||||||| |||||||||| || |||||||| ||||||||||| ||||||||    
T  2707656 tccttgattgtagattatattagtcaaaatggtctcttacattaaaatgtctcgttaatatt-tcatattagtctctcaatat 2707737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 623 - 689
Target Start/End: Complemental strand, 8814240 - 8814174
Alignment:
Q  623 tattaaaatgtttctttaatattatcatattagtccctcaatatacgtacttattgtcatatcagtc 689  Q
    ||||||||| ||| ||||||||| ||||||||||| | |||||||| ||||||||||||||| ||||    
T  8814240 tattaaaatatttttttaatattgtcatattagtctcccaatatacttacttattgtcatattagtc 8814174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 758 - 843
Target Start/End: Original strand, 42420512 - 42420597
Alignment:
Q  758 tattttaacgtcagagactatttgactagcaaagtgtataatcaaagactattttaaaatttcaatacatttaaagactattgtga 843  Q
    ||||||| |||||  ||||||||||||| ||||||  |||||||   |||||||||||||||  |||||||||||||| |||||||    
T  42420512 tattttagcgtcaaggactatttgactaacaaagtacataatcacgaactattttaaaattttgatacatttaaagacaattgtga 42420597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 550 - 618
Target Start/End: Complemental strand, 8407261 - 8407193
Alignment:
Q  550 attagtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtct 618  Q
    |||||| ||| |||||||||||||||||||||| |  |||||| ||||| | |||||||||||||||||    
T  8407261 attagtttctgaatgtatcaaaattttaaaatagttattgattatgcaccacattaatcaaaatagtct 8407193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 604 - 708
Target Start/End: Complemental strand, 18970260 - 18970157
Alignment:
Q  604 taatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctcaatatacgtacttattgtcatatcagtcattataaatactta 703  Q
    ||||||||||||||||| |  |||||||||| | |||||| | |||||| ||||||||||||||| || ||| | |||||||| ||  ||||| ||||||    
T  18970260 taatcaaaatagtctctcacgttaaaatgttccattaatactgtcatatcagtccctcaatatacttatttactatcatatcaatc-ctataagtactta 18970162  T
Q  704 cttat 708  Q
    |||||    
T  18970161 cttat 18970157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 804 - 880
Target Start/End: Original strand, 27769982 - 27770058
Alignment:
Q  804 gactattttaaaatttcaatacatttaaagactattgtgattactcattacacatttaaggaataaaaggactatta 880  Q
    |||||||||| ||||| |||||||| |||||||||| ||| || | |||||||||||| |||  |||||||||||||    
T  27769982 gactattttagaattttaatacattgaaagactattatgactatttattacacatttagggatcaaaaggactatta 27770058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 758 - 828
Target Start/End: Original strand, 11534949 - 11535020
Alignment:
Q  758 tattttaacgtcagagactat-ttgactagcaaagtgtataatcaaagactattttaaaatttcaatacatt 828  Q
    |||||||| || ||||||||| |||||||| |||||| ||||||||| |||||||||||||||  |||||||    
T  11534949 tattttaatgttagagactatgttgactagaaaagtgaataatcaaatactattttaaaattttgatacatt 11535020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 561 - 664
Target Start/End: Original strand, 23159081 - 23159184
Alignment:
Q  561 aatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccct 660  Q
    |||||||||||||||||||||| |  ||||||||||| |   ||| | ||||||||| || || || ||||||||| ||||||||| |||||| |||| |    
T  23159081 aatgtatcaaaattttaaaatagtatttgattgtgcatttcgttagtaaaaatagtccctgatgttgaaatgtttcattaatattaacatatttgtcctt 23159180  T
Q  661 caat 664  Q
    ||||    
T  23159181 caat 23159184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 561 - 620
Target Start/End: Original strand, 29686478 - 29686537
Alignment:
Q  561 aatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctct 620  Q
    ||||||| ||||||| ||||||||| ||| ||||||||| | ||||||||||||||||||    
T  29686478 aatgtattaaaatttcaaaatactcattgcttgtgcactctgttaatcaaaatagtctct 29686537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 561 - 619
Target Start/End: Complemental strand, 22579558 - 22579500
Alignment:
Q  561 aatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctc 619  Q
    |||||||||||||||||||||| ||| ||||| | |||| | |||||||||||||||||    
T  22579558 aatgtatcaaaattttaaaataatccctgattatacactttgttaatcaaaatagtctc 22579500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 552 - 714
Target Start/End: Complemental strand, 29686755 - 29686593
Alignment:
Q  552 tagtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcata 651  Q
    |||||||| ||||||| |||| || |||||| |  ||||||||| | |   ||| |||||||| || |  || |||||||||||| |||||||| ||||     
T  29686755 tagtctctcaatgtataaaaagttcaaaataatatttgattgtgtagttcgttagtcaaaataatcccagatgttaaaatgtttcattaatattgtcatg 29686656  T
Q  652 ttagtccctcaatatacgtacttattgtcatatcagtcattataaatacttacttatcgtcat 714  Q
    ||| ||  ||||||||  |||||||| ||||||||||  || |||| |||||||||| |||||    
T  29686655 ttaatctttcaatataattacttattatcatatcagttcttgtaaagacttacttattgtcat 29686593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 588 - 681
Target Start/End: Complemental strand, 9023445 - 9023352
Alignment:
Q  588 tgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctcaatatacgtacttattgtca 681  Q
    ||||||| |||| ||||| ||||||||||| || | ||| ||||  ||| || ||||| |||||||||||| ||||||||| || |||||||||    
T  9023445 tgattgtacactttattagtcaaaatagtccctaacattcaaatacttcattgatattgtcatattagtccttcaatatacttatttattgtca 9023352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 552 - 681
Target Start/End: Complemental strand, 11535029 - 11534900
Alignment:
Q  552 tagtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcata 651  Q
    ||||| || |||||||||||||||||||||| |  |||||| | |||| |  || |||| ||||||||| | ||||||||  ||  |||||||| |||||    
T  11535029 tagtccctcaatgtatcaaaattttaaaatagtatttgattattcacttttctagtcaacatagtctctaacattaaaataatttgttaatattgtcata 11534930  T
Q  652 ttagtccctcaatatacgtacttattgtca 681  Q
    ||| ||  | ||||||| ||||||||||||    
T  11534929 ttaatcttttaatatacttacttattgtca 11534900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 552 - 617
Target Start/End: Original strand, 17676571 - 17676636
Alignment:
Q  552 tagtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtc 617  Q
    |||||||| |||||||||||||| ||||||| | |||||||||||||| | ||| ||||| |||||    
T  17676571 tagtctctcaatgtatcaaaattctaaaatagttcttgattgtgcactctgttagtcaaagtagtc 17676636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 561 - 686
Target Start/End: Original strand, 32517871 - 32517996
Alignment:
Q  561 aatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccct 660  Q
    |||| ||| ||||||||||||| ||| ||| ||||||||| |||  |||||||||||| ||| ||| ||||  ||| |||||||| |||||| ||||  |    
T  32517871 aatgcatcgaaattttaaaatagtccctgactgtgcactacattggtcaaaatagtcttttacatttaaattattcgttaatattgtcatatcagtctat 32517970  T
Q  661 caatatacgtacttattgtcatatca 686  Q
    |||| ||  | |||||||| ||||||    
T  32517971 caatttatttccttattgttatatca 32517996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 559 - 688
Target Start/End: Complemental strand, 37181370 - 37181242
Alignment:
Q  559 ttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtcc 658  Q
    ||||| |||||||||||||||| | || |||| ||||||||   ||  |||||||| |||||    |||||||||||| |||||||| ||||||| || |    
T  37181370 ttaatatatcaaaattttaaaaca-tcattgactgtgcacttcgttggtcaaaataatctctagcgttaaaatgtttcgttaatattgtcatattggttc 37181272  T
Q  659 ctcaatatacgtacttattgtcatatcagt 688  Q
     | ||||||| |||| ||||||||||||||    
T  37181271 attaatatacttactaattgtcatatcagt 37181242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 577 - 654
Target Start/End: Original strand, 39194868 - 39194945
Alignment:
Q  577 aaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatatta 654  Q
    |||||| || ||||||||||||| | ||| ||||||||||| ||   ||||||||||||| |||||||| ||||||||    
T  39194868 aaaatagtcattgattgtgcactttgttagtcaaaatagtcactgccattaaaatgtttcgttaatattgtcatatta 39194945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 573 - 682
Target Start/End: Complemental strand, 42525644 - 42525535
Alignment:
Q  573 ttttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctcaatatacgtac 672  Q
    |||||||||| | | ||||||||||  || |||||||||||||||||||   ||||||||| ||  |||||||   |||| | ||||||||||||| ||     
T  42525644 ttttaaaataattcatgattgtgcatgatgttaatcaaaatagtctcttgcgttaaaatgtatcgctaatattgcaatatcaatccctcaatatacttat 42525545  T
Q  673 ttattgtcat 682  Q
    ||||||||||    
T  42525544 ttattgtcat 42525535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 788 - 828
Target Start/End: Original strand, 917172 - 917212
Alignment:
Q  788 aaagtgtataatcaaagactattttaaaatttcaatacatt 828  Q
    |||||||| |||||||||||||||||||||||| |||||||    
T  917172 aaagtgtacaatcaaagactattttaaaatttcgatacatt 917212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 755 - 827
Target Start/End: Original strand, 9572679 - 9572751
Alignment:
Q  755 taatattttaacgtcagagactatttgactagcaaagtgtataatcaaagactattttaaaatttcaatacat 827  Q
    |||||||||||||||| |||||||||||||| |  | | || ||| || ||||||||||||||||| ||||||    
T  9572679 taatattttaacgtcaaagactatttgactaacgtaatatacaataaatgactattttaaaatttcgatacat 9572751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 559 - 631
Target Start/End: Complemental strand, 16750345 - 16750273
Alignment:
Q  559 ttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaat 631  Q
    |||||||||||||||||||||||| | | | |||||||||| ||||| ||| ||| |||||| | ||||||||    
T  16750345 ttaatgtatcaaaattttaaaatagttcataattgtgcactctattagtcacaatcgtctctgacattaaaat 16750273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 569 - 620
Target Start/End: Original strand, 8206087 - 8206138
Alignment:
Q  569 aaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctct 620  Q
    |||||||||||||| || ||||||||||||  | ||||||||||||||||||    
T  8206087 aaaattttaaaatagtctttgattgtgcacattgttaatcaaaatagtctct 8206138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 758 - 828
Target Start/End: Original strand, 11498009 - 11498080
Alignment:
Q  758 tattttaacgtcagagactat-ttgactagcaaagtgtataatcaaagactattttaaaatttcaatacatt 828  Q
    |||||||| || || |||||| |||||||| |||||| ||||||||| |||||||||||||||  |||||||    
T  11498009 tattttaatgttagggactatgttgactagaaaagtgaataatcaaatactattttaaaattttgatacatt 11498080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 758 - 828
Target Start/End: Original strand, 11505365 - 11505436
Alignment:
Q  758 tattttaacgtcagagactat-ttgactagcaaagtgtataatcaaagactattttaaaatttcaatacatt 828  Q
    |||||||| || || |||||| |||||||| |||||| ||||||||| |||||||||||||||  |||||||    
T  11505365 tattttaatgttagggactatgttgactagaaaagtgaataatcaaatactattttaaaattttgatacatt 11505436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 758 - 828
Target Start/End: Original strand, 11512759 - 11512830
Alignment:
Q  758 tattttaacgtcagagactat-ttgactagcaaagtgtataatcaaagactattttaaaatttcaatacatt 828  Q
    |||||||| || || |||||| |||||||| |||||| ||||||||| |||||||||||||||  |||||||    
T  11512759 tattttaatgttagggactatgttgactagaaaagtgaataatcaaatactattttaaaattttgatacatt 11512830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 758 - 828
Target Start/End: Original strand, 11520135 - 11520206
Alignment:
Q  758 tattttaacgtcagagactat-ttgactagcaaagtgtataatcaaagactattttaaaatttcaatacatt 828  Q
    |||||||| || || |||||| |||||||| |||||| ||||||||| |||||||||||||||  |||||||    
T  11520135 tattttaatgttagggactatgttgactagaaaagtgaataatcaaatactattttaaaattttgatacatt 11520206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 758 - 828
Target Start/End: Original strand, 11527543 - 11527614
Alignment:
Q  758 tattttaacgtcagagactat-ttgactagcaaagtgtataatcaaagactattttaaaatttcaatacatt 828  Q
    |||||||| || || |||||| |||||||| |||||| ||||||||| |||||||||||||||  |||||||    
T  11527543 tattttaatgttagggactatgttgactagaaaagtgaataatcaaatactattttaaaattttgatacatt 11527614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 508 - 595
Target Start/End: Original strand, 16127050 - 16127136
Alignment:
Q  508 taatagtcattttggttctcttatgtttaacgagtagtctcaattagtctcttaatgtatcaaaattttaaaatactccttgattgtg 595  Q
    |||||||||||||||| |    |||| ||| |||||||| |||| ||||||| || |||||||||||| |||||| ||||||||||||    
T  16127050 taatagtcattttggtccctaaatgtgtaaggagtagtcacaat-agtctctcaaagtatcaaaatttcaaaatagtccttgattgtg 16127136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 797 - 880
Target Start/End: Complemental strand, 16127133 - 16127050
Alignment:
Q  797 aatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcattacacatttaaggaataaaaggactatta 880  Q
    |||||| ||||||||| ||||||  |||| || | |||||||||||| ||||| ||||||||||| |||  |||| ||||||||    
T  16127133 aatcaaggactattttgaaattttgatactttgagagactattgtgactactccttacacatttagggaccaaaatgactatta 16127050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 574 - 629
Target Start/End: Original strand, 16722878 - 16722933
Alignment:
Q  574 tttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaa 629  Q
    ||||||||| | | |||||||||||| |||||||||||||| ||||| ||||||||    
T  16722878 tttaaaataatacatgattgtgcactctattaatcaaaataatctctaatattaaa 16722933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 611 - 714
Target Start/End: Complemental strand, 18919949 - 18919846
Alignment:
Q  611 aatagtctcttatattaaaatgtttctttaatattatcatattagtccctcaatatacgtacttattgtcatatcagtcattataaatacttacttatcg 710  Q
    ||||||| || || |||||||||||| |||||||| | |||||| | | |||||| || |||||||| ||||||| ||| |||||| |||| ||| || |    
T  18919949 aatagtccctaatgttaaaatgtttcattaatattgttatattaattcttcaatacacttacttattatcatatcggtctttataagtactcactcattg 18919850  T
Q  711 tcat 714  Q
    ||||    
T  18919849 tcat 18919846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 561 - 668
Target Start/End: Complemental strand, 32270700 - 32270593
Alignment:
Q  561 aatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccct 660  Q
    |||||||| |||||| |||||| ||  |||||||||  ||| ||| ||||||||||| ||||  ||||| | |||| |||||||| ||||||||  ||||    
T  32270700 aatgtatcgaaatttcaaaataatctatgattgtgcgatatgttagtcaaaatagtcccttacgttaaagtatttcgttaatattgtcatattaacccct 32270601  T
Q  661 caatatac 668  Q
     |||||||    
T  32270600 taatatac 32270593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 602 - 663
Target Start/End: Original strand, 4400732 - 4400794
Alignment:
Q  602 attaatcaaaatagtctcttatattaaaatgtttctttaata-ttatcatattagtccctcaa 663  Q
    ||||||||||||||||| ||| ||||||||||| | |||||| ||||||||| | ||||||||    
T  4400732 attaatcaaaatagtctattacattaaaatgttccgttaatatttatcatatcaatccctcaa 4400794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 603 - 657
Target Start/End: Original strand, 4658409 - 4658463
Alignment:
Q  603 ttaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtc 657  Q
    |||||||||||||||||| | ||||||||||| |  ||||| |||||||||||||    
T  4658409 ttaatcaaaatagtctctcagattaaaatgttccactaataatatcatattagtc 4658463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 778 - 880
Target Start/End: Original strand, 14461776 - 14461878
Alignment:
Q  778 tttgactagcaaagtgtataatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcattacacatttaaggaataaaaggacta 877  Q
    |||||||| | ||||||| ||||| ||||||||||||||||| |||| | | ||||| |||||||   |||| ||||| ||||| |||  |||| |||||    
T  14461776 tttgactaacgaagtgtacaatcagagactattttaaaatttgaatagactgaaagattattgtggccactcgttacatatttagggatcaaaatgacta 14461875  T
Q  878 tta 880  Q
    |||    
T  14461876 tta 14461878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 758 - 843
Target Start/End: Original strand, 22579487 - 22579573
Alignment:
Q  758 tattttaacgtcagagactattt-gactagcaaagtgtataatcaaagactattttaaaatttcaatacatttaaagactattgtga 843  Q
    ||||||| |||| |||||||||| || || |||||||||||||||  || |||||||||||||  ||||||| |  |||||||||||    
T  22579487 tattttagcgtccgagactattttgattaacaaagtgtataatcagggattattttaaaattttgatacattgatggactattgtga 22579573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 530 - 620
Target Start/End: Complemental strand, 27001470 - 27001381
Alignment:
Q  530 atgtttaacgagtagtctcaattagtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctct 620  Q
    |||| ||| |||||||| |||| |||||||  || |||||||||||||||||| ||  |||||||||||| | ||| ||||||| ||||||    
T  27001470 atgtgtaatgagtagtcacaat-agtctctcgatatatcaaaattttaaaatagtctctgattgtgcactctgttactcaaaatggtctct 27001381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 766 - 851
Target Start/End: Original strand, 31949271 - 31949357
Alignment:
Q  766 cgtcagagactattt-gactagcaaagtgtataatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcat 851  Q
    |||||| |||||||| ||||| || |||| | ||||| ||||| | ||||||||| |||| ||| | ||||||||||||||||||||    
T  31949271 cgtcagggactattttgactaacatagtgcacaatcagagactctcttaaaattttaatatattaagagactattgtgattactcat 31949357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 558 - 686
Target Start/End: Original strand, 3599844 - 3599973
Alignment:
Q  558 cttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatatta-gt 656  Q
    ||||||||||  ||||||||||||| |  ||||||||| | | | ||||||||||| |||||| |  ||||||| |||| | |||||| |||||||| ||    
T  3599844 cttaatgtattgaaattttaaaatagtgtttgattgtgtattttgttaatcaaaatggtctctcacgttaaaatatttcgtaaatattgtcatattatgt 3599943  T
Q  657 ccctcaatatacgtacttattgtcatatca 686  Q
    |  |||| |||  || ||||||||||||||    
T  3599944 ctttcaacatatttatttattgtcatatca 3599973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 756 - 828
Target Start/End: Complemental strand, 3599920 - 3599847
Alignment:
Q  756 aatattttaacgtcagagactattt-gactagcaaagtgtataatcaaagactattttaaaatttcaatacatt 828  Q
    ||||||||||||| |||||| |||| || || |||| |  | ||||||| ||||||||||||||||||||||||    
T  3599920 aatattttaacgtgagagaccattttgattaacaaaatacacaatcaaacactattttaaaatttcaatacatt 3599847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 758 - 878
Target Start/End: Original strand, 7756655 - 7756776
Alignment:
Q  758 tattttaacgtcagagactattt-gactagcaaagtgtataatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcattacac 856  Q
    ||||||||||  ||||||||||| ||||| | || |||| |||||  ||||||||| ||||||||||||||| |   ||||||||| ||| || || |||    
T  7756655 tattttaacgcgagagactattttgactaacgaattgtacaatcattgactattttgaaatttcaatacattcaggaactattgtggttattcgttgcac 7756754  T
Q  857 atttaaggaataaaaggactat 878  Q
    ||||| |||  |||| ||||||    
T  7756755 atttagggaccaaaatgactat 7756776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 561 - 682
Target Start/End: Complemental strand, 9607454 - 9607333
Alignment:
Q  561 aatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccct 660  Q
    |||||||| ||||| ||||| | ||  |||||||||| | | |||||||||||| || ||  | |||||||||| | ||| |||| |||||| |||| ||    
T  9607454 aatgtatccaaattctaaaacagtcactgattgtgcattttcttaatcaaaataatccctcgtgttaaaatgttccgttagtattgtcatatcagtctct 9607355  T
Q  661 caatatacgtacttattgtcat 682  Q
    |||||||| || ||||| ||||    
T  9607354 caatatacttatttattatcat 9607333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 552 - 681
Target Start/End: Complemental strand, 11498089 - 11497960
Alignment:
Q  552 tagtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcata 651  Q
    ||||| || |||||||||||||||||||||| |  |||||| | |||| |  || |||| |||||| || | ||||||||  ||  |||||||| |||||    
T  11498089 tagtccctcaatgtatcaaaattttaaaatagtatttgattattcacttttctagtcaacatagtccctaacattaaaataatttgttaatattgtcata 11497990  T
Q  652 ttagtccctcaatatacgtacttattgtca 681  Q
    ||| ||  | ||||||| ||||||||||||    
T  11497989 ttaatcttttaatatacttacttattgtca 11497960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 797 - 858
Target Start/End: Original strand, 19342539 - 19342600
Alignment:
Q  797 aatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcattacacat 858  Q
    ||||||| ||||||||||||||| |||| ||| | ||| ||||||| |||||| ||||||||    
T  19342539 aatcaaaaactattttaaaattttaatatattgatagattattgtggttactcgttacacat 19342600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 561 - 618
Target Start/End: Complemental strand, 27554370 - 27554313
Alignment:
Q  561 aatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtct 618  Q
    |||||||||||||| ||||||| ||||| |||||||||| | ||| | ||||||||||    
T  27554370 aatgtatcaaaattctaaaataatccttaattgtgcactctgttagttaaaatagtct 27554313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 552 - 617
Target Start/End: Complemental strand, 31949343 - 31949278
Alignment:
Q  552 tagtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtc 617  Q
    |||||||||||| ||| |||||||||| | | ||  |||||||||||||| ||| |||||||||||    
T  31949343 tagtctcttaatatattaaaattttaagagagtctctgattgtgcactatgttagtcaaaatagtc 31949278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0687 (Bit Score: 59; Significance: 2e-24; HSPs: 1)
Name: scaffold0687
Description:

Target: scaffold0687; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 552 - 714
Target Start/End: Original strand, 1620 - 1782
Alignment:
Q  552 tagtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcata 651  Q
    |||||| | |||||||||||||||||||||| |  |||||||||||||   ||  |||||||||||||| ||||| |||||| || |||||||| |||||    
T  1620 tagtctttcaatgtatcaaaattttaaaataatttttgattgtgcacttcgttggtcaaaatagtctctaatattgaaatgtctcattaatattgtcata 1719  T
Q  652 ttagtccctcaatatacgtacttattgtcatatcagtcattataaatacttacttatcgtcat 714  Q
    ||| ||  ||||||||  ||||||||||||||  |||| ||||| ||| |||||||| |||||    
T  1720 ttaatctttcaatatatttacttattgtcatactagtctttatatatatttacttattgtcat 1782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 3e-23; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 508 - 708
Target Start/End: Original strand, 40124264 - 40124463
Alignment:
Q  508 taatagtcattttggttctcttatgtttaacgagtagtctcaattagtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaat 607  Q
    ||||||||| |||||| ||   |||| |||||||||||| |||| ||||  |||||||||| ||||||||||||  ||  ||||||||||||   ||| |    
T  40124264 taatagtcactttggtccttgaatgtgtaacgagtagtcacaat-agtccattaatgtatcgaaattttaaaatggtctctgattgtgcactccgttagt 40124362  T
Q  608 caaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctcaatatacgtacttattgtcatatcagtcattataaatacttactta 707  Q
    ||||||||||  | | |||||| |  ||| |||||||| ||||||||| || ||||||||| |||||||||| |||||||||||||||  ||| ||||||    
T  40124363 caaaatagtccataacattaaagtacttcattaatattgtcatattagcccttcaatatacttacttattgtaatatcagtcattatacgtacatactta 40124462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 561 - 707
Target Start/End: Original strand, 1517592 - 1517736
Alignment:
Q  561 aatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccct 660  Q
    |||||||| ||||||||||||| || ||||||||| |||||||  ||||||||| |||| ||| |||||||| |   |||||||| |||||| | || ||    
T  1517592 aatgtatcgaaattttaaaatagtctttgattgtggactatat--atcaaaataatctcctatgttaaaatggtctgttaatattgtcatataaatctct 1517689  T
Q  661 caatatacgtacttattgtcatatcagtcattataaatacttactta 707  Q
     ||||||| || |||||||||||||||| ||||||| ||||||||||    
T  1517690 taatatacctatttattgtcatatcagttattataagtacttactta 1517736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 559 - 714
Target Start/End: Complemental strand, 19206558 - 19206403
Alignment:
Q  559 ttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtcc 658  Q
    |||||||||||||||||||||||| |   ||||| |||||| | ||| |||||||| ||||| || |||| |||| |  |||||||| || |||||||||    
T  19206558 ttaatgtatcaaaattttaaaatagtttctgattatgcactttgttagtcaaaatattctctgatgttaagatgtattattaatattgtcttattagtcc 19206459  T
Q  659 ctcaatatacgtacttattgtcatatcagtcattataaatacttacttatcgtcat 714  Q
     ||||||||  |||||||||||||| ||||  |||||| ||||||| ||| |||||    
T  19206458 ttcaatatatttacttattgtcatagcagttcttataagtacttacatattgtcat 19206403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 579 - 714
Target Start/End: Original strand, 21603481 - 21603616
Alignment:
Q  579 aatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctcaatatacgtacttattg 678  Q
    |||| |||||| ||||||||| | ||| |||||||||||| | |||||||||| |||| |||||||| |||| ||||| | |||||| || || ||||||    
T  21603481 aatagtccttggttgtgcactttgttagtcaaaatagtctttgatattaaaatatttcgttaatattgtcatgttagttcttcaatagacttagttattg 21603580  T
Q  679 tcatatcagtcattataaatacttacttatcgtcat 714  Q
    ||||||  ||| ||||| |||||||||||| |||||    
T  21603581 tcatattggtccttatacatacttacttattgtcat 21603616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 552 - 681
Target Start/End: Original strand, 7165606 - 7165736
Alignment:
Q  552 tagtctcttaatgtatcaaaattttaaaa-tactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcat 650  Q
    |||||||||||||||| ||| |||||||| || | |||||||||||||| ||||| |||||||||||  | | ||||||||  ||  |||||||| ||||    
T  7165606 tagtctcttaatgtattaaatttttaaaaatagttcttgattgtgcactttattagtcaaaatagtccttaacattaaaataatttgttaatattttcat 7165705  T
Q  651 attagtccctcaatatacgtacttattgtca 681  Q
    |||||||  ||||||||| ||||||||||||    
T  7165706 attagtctttcaatatacttacttattgtca 7165736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 552 - 686
Target Start/End: Original strand, 29926689 - 29926822
Alignment:
Q  552 tagtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcata 651  Q
    |||| ||||||| |||| ||||||||||||| |  |||||||| |||||| ||||| |||||||| |||||   ||||||||||| | | |||| ||| |    
T  29926689 tagtttcttaatatatccaaattttaaaatagtttttgattgtacactatgttaattaaaatagtttcttacggtaaaatgtttcgtcagtattgtcaca 29926788  T
Q  652 ttagtccctcaatatacgtacttattgtcatatca 686  Q
    |||||||||||| |||| |||||||||||||||||    
T  29926789 ttagtccctcaa-atacttacttattgtcatatca 29926822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 559 - 688
Target Start/End: Original strand, 12676431 - 12676560
Alignment:
Q  559 ttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtcc 658  Q
    |||||||||| |||| |||||||| ||  ||||||||||||   ||| |||||||| | ||| |  |||||||||||  |||||||| ||||||||||||    
T  12676431 ttaatgtatcgaaatgttaaaatagtctatgattgtgcacttagttagtcaaaataatttctgacgttaaaatgttttattaatattgtcatattagtcc 12676530  T
Q  659 ctcaatatacgtacttattgtcatatcagt 688  Q
    |||||||||| ||  |||||||||||||||    
T  12676531 ctcaatatacttatctattgtcatatcagt 12676560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 788 - 861
Target Start/End: Original strand, 7165760 - 7165833
Alignment:
Q  788 aaagtgtataatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcattacacattta 861  Q
    |||||| | ||||| ||||||||||||||||| |||||||| |||||||||||||| ||||| |||||||||||    
T  7165760 aaagtgcaaaatcagagactattttaaaattttaatacattgaaagactattgtgactactcgttacacattta 7165833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 554 - 714
Target Start/End: Complemental strand, 15301647 - 15301488
Alignment:
Q  554 gtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatatt 653  Q
    |||||| |||||||| |||||| |||||| ||  |||||||||| | | | | |||||||||||||| | ||||||||  ||| |||||||| || ||||    
T  15301647 gtctctcaatgtatcgaaatttcaaaataatctctgattgtgcattttct-agtcaaaatagtctctgacattaaaatacttcgttaatattgtcttatt 15301549  T
Q  654 agtccctcaatatacgtacttattgtcatatcagtcattataaatacttacttatcgtcat 714  Q
    ||| | ||||||||| |||||||| |||||| |||| |||||  |||| ||||||| ||||    
T  15301548 agtacttcaatatacttacttattatcatatgagtccttatatgtactcacttatcatcat 15301488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 535 - 682
Target Start/End: Original strand, 17604256 - 17604400
Alignment:
Q  535 taacgagtagtctcaattagtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtt 634  Q
    |||||||||||| |||| |||  || ||| ||||||||||| |||||| || |||||||| |||| ||||| |||||||||||  |||  ||||||| ||    
T  17604256 taacgagtagtcacaat-agttactcaatttatcaaaatttcaaaatagtcattgattgt-cactctattagtcaaaatagtccattaatttaaaatatt 17604353  T
Q  635 tctttaatattatcatattagtccctcaatatacgtacttattgtcat 682  Q
    || ||||||||||||||  | || |||||||||| |||||||||||||    
T  17604354 tcgttaatattatcata-aaatctctcaatatacttacttattgtcat 17604400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 561 - 720
Target Start/End: Complemental strand, 30256355 - 30256196
Alignment:
Q  561 aatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccct 660  Q
    ||||||||||||||||||   | |  ||||||||||| ||| ||| ||| |||||| |||||  ||||||| |||  |||||||| ||||||||||| ||    
T  30256355 aatgtatcaaaattttaattaaatatttgattgtgcattatgttagtcagaatagtttcttacgttaaaatattttgttaatattgtcatattagtcact 30256256  T
Q  661 caatatacgtacttattgtcatatcagtcattataaatacttacttatcgtcatatcaat 720  Q
    |||||||| || ||||| ||||||||| | || ||  |||||| |||| || ||||||||    
T  30256255 caatatacttatttattatcatatcagaccttgtatgtacttagttattgttatatcaat 30256196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 758 - 865
Target Start/End: Original strand, 15301570 - 15301677
Alignment:
Q  758 tattttaacgtcagagactattt-gactagcaaagtgtataatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcattacac 856  Q
    |||||||| |||||||||||||| |||||| ||| || | ||||| ||| |||||| ||||||| ||||||| | |||| |||||||||| || ||||||    
T  15301570 tattttaatgtcagagactattttgactagaaaa-tgcacaatcagagattattttgaaatttcgatacattgagagacgattgtgattagtcgttacac 15301668  T
Q  857 atttaagga 865  Q
    |||||||||    
T  15301669 atttaagga 15301677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 758 - 880
Target Start/End: Original strand, 6788469 - 6788592
Alignment:
Q  758 tattttaacgtcagagactatt-tgactagcaaagtgtataatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcattacac 856  Q
    ||||||| | |||||||||||| |||||| ||||||| | ||||| | |||||||||||||||  ||||||| || ||||||| ||| || |  ||||||    
T  6788469 tattttagcatcagagactattctgactaacaaagtgcacaatcagaaactattttaaaattttgatacattgaatgactattatgactatttgttacac 6788568  T
Q  857 atttaaggaataaaaggactatta 880  Q
    |||||||||  |||| ||||||||    
T  6788569 atttaaggatgaaaatgactatta 6788592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 565 - 718
Target Start/End: Complemental strand, 2687209 - 2687047
Alignment:
Q  565 tatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaa---------tgtttctttaatattatcatattag 655  Q
    |||||||||||||||||| || |||||| || | ||| ||| |||||||||||| |||||||||||         |||||| |||||||| || |||| |    
T  2687209 tatcaaaattttaaaatagtctttgattttgtattatgttagtcaaaatagtctattatattaaaaatattaaaatgtttcgttaatattgtcttatttg 2687110  T
Q  656 tccctcaatatacgtacttattgtcatatcagtcattataaatacttacttatcgtcatatca 718  Q
    | | | |||| || | |||||||||| |||| || |||||| |||||||||| ||||||||||    
T  2687109 ttcttgaatacacattcttattgtcacatcaatctttataagtacttacttaccgtcatatca 2687047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 755 - 865
Target Start/End: Original strand, 14441086 - 14441197
Alignment:
Q  755 taatattttaacgtcagagactattt-gactagcaaagtgtataatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcatta 853  Q
    ||||||||||||||| ||||| |||| || || || | || ||||||| | |||||||||||||||| ||||| | | ||| ||||||  ||||||||||    
T  14441086 taatattttaacgtcggagaccattttgattaacataatgcataatcatatactattttaaaatttcgatacaatgagagattattgtatttactcatta 14441185  T
Q  854 cacatttaagga 865  Q
    |||||| |||||    
T  14441186 cacattcaagga 14441197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 625 - 696
Target Start/End: Original strand, 42657850 - 42657921
Alignment:
Q  625 ttaaaatgtttctttaatattatcatattagtccctcaatatacgtacttattgtcatatcagtcattataa 696  Q
    |||||||||||| |||| ||||||||||||||||||||||| |  ||  ||||||||||||| || ||||||    
T  42657850 ttaaaatgtttcattaaaattatcatattagtccctcaataaatttaaatattgtcatatcaatctttataa 42657921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 607 - 681
Target Start/End: Original strand, 41746424 - 41746498
Alignment:
Q  607 tcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctcaatatacgtacttattgtca 681  Q
    |||||||||||||| | ||||||||  ||| |||||||| ||||||||| || ||||||||| || |||||||||    
T  41746424 tcaaaatagtctctaacattaaaatacttcattaatattgtcatattagcccttcaatatacttatttattgtca 41746498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 562 - 599
Target Start/End: Original strand, 6923757 - 6923794
Alignment:
Q  562 atgtatcaaaattttaaaatactccttgattgtgcact 599  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  6923757 atgtatcaaaattttaaaatagtccttgattgtgcact 6923794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 562 - 599
Target Start/End: Original strand, 28779733 - 28779770
Alignment:
Q  562 atgtatcaaaattttaaaatactccttgattgtgcact 599  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  28779733 atgtatcaaaattttaaaatagtccttgattgtgcact 28779770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 562 - 679
Target Start/End: Original strand, 43191794 - 43191911
Alignment:
Q  562 atgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctc 661  Q
    ||||||||||||||||||||| |  |||||| |  ||| | ||| |||||| ||| | | |||||||||| |||| |||||||| | ||||||||||  |    
T  43191794 atgtatcaaaattttaaaatagtttttgattatatactttgttagtcaaaaaagtttttaatattaaaatatttcgttaatattgttatattagtcctcc 43191893  T
Q  662 aatatacgtacttattgt 679  Q
    ||||||  ||||||||||    
T  43191894 aatatatttacttattgt 43191911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 530 - 618
Target Start/End: Complemental strand, 7165830 - 7165743
Alignment:
Q  530 atgtttaacgagtagtctcaattagtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtct 618  Q
    |||| |||||||||||| |||| ||||| | ||||||| |||||||||||||| ||  ||||| |||||| ||||| | ||||||||||    
T  7165830 atgtgtaacgagtagtcacaat-agtctttcaatgtattaaaattttaaaatagtctctgattttgcactttattagttaaaatagtct 7165743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 638 - 714
Target Start/End: Original strand, 13242544 - 13242620
Alignment:
Q  638 ttaatattatcatattagtccctcaatatacgtacttattgtcatatcagtcattataaatacttacttatcgtcat 714  Q
    |||||||| |||||||||||| | |||||   ||||||||||||||||| || |||||| |||||| |||| |||||    
T  13242544 ttaatattgtcatattagtcctttaatatggttacttattgtcatatcaatccttataagtacttatttattgtcat 13242620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 567 - 619
Target Start/End: Complemental strand, 20966264 - 20966212
Alignment:
Q  567 tcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctc 619  Q
    |||||||||||||||| || ||||||||||||| | ||| |||||||||||||    
T  20966264 tcaaaattttaaaatagtctttgattgtgcactttgttagtcaaaatagtctc 20966212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 552 - 620
Target Start/End: Original strand, 34883941 - 34884009
Alignment:
Q  552 tagtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctct 620  Q
    ||||| || |||||||||||||||||||||| ||  | |||||||||| | ||| ||||||||||||||    
T  34883941 tagtccctcaatgtatcaaaattttaaaatagtctctaattgtgcactctgttagtcaaaatagtctct 34884009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 797 - 865
Target Start/End: Complemental strand, 40124347 - 40124279
Alignment:
Q  797 aatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcattacacatttaagga 865  Q
    ||||| |||| ||||||||||||| ||||||| |  ||||||||||| ||||| ||||||||| |||||    
T  40124347 aatcagagaccattttaaaatttcgatacattaatggactattgtgactactcgttacacattcaagga 40124279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 759 - 841
Target Start/End: Complemental strand, 12676503 - 12676420
Alignment:
Q  759 attttaacgtcagagactattt-gactagcaaagtgtataatcaaagactattttaaaatttcaatacatttaaagactattgt 841  Q
    |||||||||||||| | ||||| ||||| | ||||| | ||||| |||||||||||| ||||| ||||||| ||||| ||||||    
T  12676503 attttaacgtcagaaattattttgactaactaagtgcacaatcatagactattttaacatttcgatacattaaaagattattgt 12676420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 535 - 674
Target Start/End: Complemental strand, 18903248 - 18903110
Alignment:
Q  535 taacgagtagtctcaattagtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtt 634  Q
    |||||||||||| |||| ||||  | |||||||| ||||| ||||||| |   |||||||||||||| ||||||||||| |||| | || |||||||| |    
T  18903248 taacgagtagtcacaat-agtcattcaatgtatcgaaattctaaaatagtttctgattgtgcactatgttaatcaaaatggtctttaatgttaaaatgct 18903150  T
Q  635 tctttaatattatcatattagtccctcaatatacgtactt 674  Q
       |||| | | |||||| |||||||| |||||| |||||    
T  18903149 ctgttaacactgtcatatcagtccctcgatatacttactt 18903110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 625 - 684
Target Start/End: Original strand, 39002934 - 39002993
Alignment:
Q  625 ttaaaatgtttctttaatattatcatattagtccctcaatatacgtacttattgtcatat 684  Q
    |||| ||||||| |||| ||||| |||||||||  ||||||||| |||||||||||||||    
T  39002934 ttaatatgtttcgttaaaattattatattagtcattcaatatacttacttattgtcatat 39002993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 808 - 859
Target Start/End: Original strand, 39273385 - 39273436
Alignment:
Q  808 attttaaaatttcaatacatttaaagactattgtgattactcattacacatt 859  Q
    ||||| |||||||||||||||||  ||||||||||  |||||||||||||||    
T  39273385 attttgaaatttcaatacatttagggactattgtggctactcattacacatt 39273436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 804 - 879
Target Start/End: Original strand, 43503032 - 43503107
Alignment:
Q  804 gactattttaaaatttcaatacatttaaagactattgtgattactcattacacatttaaggaataaaaggactatt 879  Q
    |||||||||||||||| |||||||| ||| |||||||| | ||||| ||||| ||| | |||| |||| |||||||    
T  43503032 gactattttaaaattttaatacattgaaaaactattgtaactactcgttacatattaagggaaaaaaatgactatt 43503107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 603 - 665
Target Start/End: Original strand, 10880718 - 10880779
Alignment:
Q  603 ttaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctcaata 665  Q
    ||||| |||||||| | ||| ||||||||||||| ||||||||||||||||| ||| ||||||    
T  10880718 ttaattaaaatagtgt-ttacattaaaatgtttcgttaatattatcatattaatccatcaata 10880779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 638 - 676
Target Start/End: Original strand, 11281471 - 11281509
Alignment:
Q  638 ttaatattatcatattagtccctcaatatacgtacttat 676  Q
    |||||||||||||||||||||| |||||||| |||||||    
T  11281471 ttaatattatcatattagtcccacaatatacttacttat 11281509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 638 - 688
Target Start/End: Original strand, 15816904 - 15816954
Alignment:
Q  638 ttaatattatcatattagtccctcaatatacgtacttattgtcatatcagt 688  Q
    |||||||| |||||||||||| |||| |||| |||||||| ||||||||||    
T  15816904 ttaatattgtcatattagtccttcaagatacttacttattttcatatcagt 15816954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 565 - 615
Target Start/End: Complemental strand, 28779871 - 28779821
Alignment:
Q  565 tatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatag 615  Q
    |||||||||||||||||| |  |||||||| |||||||||| |||||||||    
T  28779871 tatcaaaattttaaaatagttattgattgtacactatattagtcaaaatag 28779821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 797 - 838
Target Start/End: Complemental strand, 1517623 - 1517582
Alignment:
Q  797 aatcaaagactattttaaaatttcaatacatttaaagactat 838  Q
    |||||||||||||||||||||||| ||||||| || ||||||    
T  1517623 aatcaaagactattttaaaatttcgatacattgaaggactat 1517582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 616 - 681
Target Start/End: Complemental strand, 4877123 - 4877058
Alignment:
Q  616 tctcttatattaaaatgtttctttaatattatcatattagtccctcaatatacgtacttattgtca 681  Q
    ||||||| ||||||||||||  |||||||||| |||||| ||| ||||||||| || ||| |||||    
T  4877123 tctcttacattaaaatgttttgttaatattatgatattaatccatcaatatacttatttaatgtca 4877058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 622 - 683
Target Start/End: Complemental strand, 8940130 - 8940069
Alignment:
Q  622 atattaaaatgtttctttaatattatcatattagtccctcaatatacgtacttattgtcata 683  Q
    |||||||||| |||  |||||||| |||||||||||  ||||||||| ||||| ||||||||    
T  8940130 atattaaaatatttaattaatattgtcatattagtcattcaatatacatacttgttgtcata 8940069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 762 - 838
Target Start/End: Original strand, 19206489 - 19206566
Alignment:
Q  762 ttaacgtcagagactattt-gactagcaaagtgtataatcaaagactattttaaaatttcaatacatttaaagactat 838  Q
    ||||| ||||||| ||||| ||||| ||||||| ||||||| | |||||||||||||||  ||||||| || ||||||    
T  19206489 ttaacatcagagaatattttgactaacaaagtgcataatcagaaactattttaaaattttgatacattaaaggactat 19206566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 778 - 819
Target Start/End: Original strand, 20966220 - 20966261
Alignment:
Q  778 tttgactagcaaagtgtataatcaaagactattttaaaattt 819  Q
    |||||||| ||||||| | |||||||||||||||||||||||    
T  20966220 tttgactaacaaagtgcacaatcaaagactattttaaaattt 20966261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 564 - 617
Target Start/End: Complemental strand, 21603728 - 21603675
Alignment:
Q  564 gtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtc 617  Q
    |||||||||||| |||||| ||||||||||| |||| | ||| |||||||||||    
T  21603728 gtatcaaaatttcaaaatagtccttgattgtccactttgttagtcaaaatagtc 21603675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 781 - 861
Target Start/End: Complemental strand, 28779779 - 28779698
Alignment:
Q  781 gactagcaaagtgtataatcaaagactattttaaaatttcaatacatttaaag-actattgtgattactcattacacattta 861  Q
    ||||||| ||||| | |||||| ||||||||||||||||  ||||||  |||| ||| || ||| |||||||||||||||||    
T  28779779 gactagcgaagtgcacaatcaaggactattttaaaattttgatacatcaaaagaactcttatgactactcattacacattta 28779698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 640 - 713
Target Start/End: Original strand, 33584700 - 33584773
Alignment:
Q  640 aatattatcatattagtccctcaatatacgtacttattgtcatatcagtcattataaatacttacttatcgtca 713  Q
    |||| ||||||||||||| |||||||||| || ||||| |||| ||| ||| ||||| || ||||||| |||||    
T  33584700 aataatatcatattagtctctcaatatacttatttattatcatttcattcactataagtatttacttaccgtca 33584773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 599 - 644
Target Start/End: Complemental strand, 39496962 - 39496917
Alignment:
Q  599 tatattaatcaaaatagtctcttatattaaaatgtttctttaatat 644  Q
    ||||||| ||||||||||||||||| ||||||| |||| |||||||    
T  39496962 tatattagtcaaaatagtctcttatgttaaaatatttcattaatat 39496917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 778 - 819
Target Start/End: Complemental strand, 43191843 - 43191802
Alignment:
Q  778 tttgactagcaaagtgtataatcaaagactattttaaaattt 819  Q
    |||||||| |||||| |||||||||| |||||||||||||||    
T  43191843 tttgactaacaaagtatataatcaaaaactattttaaaattt 43191802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 1e-22; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 553 - 708
Target Start/End: Original strand, 5362288 - 5362443
Alignment:
Q  553 agtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatat 652  Q
    ||||||||| |||||| |||||| |||||| | | |||||||| | | | ||| ||||||||||| || ||||||||||  ||| |||||||  ||||||    
T  5362288 agtctcttagtgtatcgaaatttcaaaatagttcatgattgtgtaatttgttagtcaaaatagtccctgatattaaaatacttcgttaatatggtcatat 5362387  T
Q  653 tagtccctcaatatacgtacttattgtcatatcagtcattataaatacttacttat 708  Q
    |||||| ||||||||| || ||||| |||||||| || ||||||||| ||||||||    
T  5362388 tagtccttcaatatacttatttattatcatatcaatccttataaatatttacttat 5362443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 605 - 716
Target Start/End: Complemental strand, 32188232 - 32188121
Alignment:
Q  605 aatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctcaatatacgtacttattgtcatatcagtcattataaatacttac 704  Q
    ||||||||||||||||||  ||||||||| |  ||||||||  |||||||||||| |||||||| |||||||| |||||| ||||||||||||||||||     
T  32188232 aatcaaaatagtctcttacgttaaaatgtctaattaatattgacatattagtcccccaatatacttacttattatcatattagtcattataaatacttaa 32188133  T
Q  705 ttatcgtcatat 716  Q
    |||  |||||||    
T  32188132 ttagtgtcatat 32188121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 559 - 705
Target Start/End: Original strand, 27376273 - 27376418
Alignment:
Q  559 ttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtcc 658  Q
    ||||||||| ||||||| |||||| || || ||||||||||   ||| ||||||| ||| || || || |||| |||| |||||||||||||||||||      
T  27376273 ttaatgtattaaaatttcaaaatagtc-ttaattgtgcacttctttagtcaaaatggtcactgatgttgaaatatttcgttaatattatcatattagttt 27376371  T
Q  659 ctcaatatacgtacttattgtcatatcagtcattataaatacttact 705  Q
     ||||||||| |||||||||| ||| ||||| ||||||||| |||||    
T  27376372 ttcaatatacttacttattgttatagcagtccttataaatatttact 27376418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 570 - 707
Target Start/End: Complemental strand, 40355115 - 40354978
Alignment:
Q  570 aaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctcaatatacg 669  Q
    |||||| |||||| ||  |||||||||||||| ||| |||||||||||  ||| |||||||   ||| |||||||| |||||||||| | || ||||||     
T  40355115 aaatttgaaaatagtctctgattgtgcactatgttagtcaaaatagtcatttacattaaaacacttcattaatattgtcatattagttcttctatataca 40355016  T
Q  670 tacttattgtcatatcagtcattataaatacttactta 707  Q
    ||||||||||||| |||||| || ||| || |||||||    
T  40355015 tacttattgtcatgtcagtccttgtaagtaattactta 40354978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 530 - 702
Target Start/End: Original strand, 34703651 - 34703821
Alignment:
Q  530 atgtttaacgagtagtctcaattagtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaa 629  Q
    |||| |||||||||||| |||| ||||  | ||||||||||| |||||||||| ||  | ||||| ||||   || ||||||||||||||| |  |||||    
T  34703651 atgtataacgagtagtcacaat-agtccatcaatgtatcaaa-ttttaaaatagtctctaattgttcacttcgttgatcaaaatagtctctaactttaaa 34703748  T
Q  630 atgtttctttaatattatcatattagtccctcaatatacgtacttattgtcatatcagtcattataaatactt 702  Q
    || |||  | |||||| |||||||||||  ||| ||||| |||||||||| |||||| |||||||||||||||    
T  34703749 atattttgtcaatattgtcatattagtctttcagtatacttacttattgttatatcaatcattataaatactt 34703821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 561 - 699
Target Start/End: Original strand, 10228752 - 10228890
Alignment:
Q  561 aatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccct 660  Q
    |||||||| |||||| |||||| || ||||||||||| |   ||| |||||||||||| | |  |||||||||||  |||| |||  ||||||||||| |    
T  10228752 aatgtatcgaaatttcaaaatagtctttgattgtgcaattcgttagtcaaaatagtctttgaccttaaaatgttttgttaaaatttacatattagtcctt 10228851  T
Q  661 caatatacgtacttattgtcatatcagtcattataaata 699  Q
    |||||||| || |||||||||||| |||  |||||||||    
T  10228852 caatatacttaattattgtcatataagttcttataaata 10228890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 638 - 728
Target Start/End: Complemental strand, 26905196 - 26905106
Alignment:
Q  638 ttaatattatcatattagtccctcaatatacgtacttattgtcatatcagtcattataaatacttacttatcgtcatatcaattcatatat 728  Q
    ||||||||||||||||| ||| ||||||||| ||||||||||||||| |||| || ||| |||||| |||| ||||| ||| | |||||||    
T  26905196 ttaatattatcatattattccttcaatatacttacttattgtcatattagtccttgtaagtacttatttattgtcatttcagtccatatat 26905106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 552 - 714
Target Start/End: Original strand, 39608358 - 39608520
Alignment:
Q  552 tagtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcata 651  Q
    |||||||| |||||||| |||||| |||||| || ||||| |||||||   ||| | ||||||||  |||| ||||||||  ||  |||||||| |||||    
T  39608358 tagtctctcaatgtatcgaaatttcaaaataatcattgatcgtgcacttcgttagttaaaatagttacttacattaaaatacttgattaatattgtcata 39608457  T
Q  652 ttagtccctcaatatacgtacttattgtcatatcagtcattataaatacttacttatcgtcat 714  Q
    ||||||  ||| ||||| |||||||| || ||| |||| |||||| |||||| |||| |||||    
T  39608458 ttagtcattcagtatacttacttattatcgtattagtctttataattacttatttattgtcat 39608520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 588 - 689
Target Start/End: Original strand, 46719847 - 46719948
Alignment:
Q  588 tgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctcaatatacgtacttattgtcatatcag 687  Q
    |||||||||| ||| ||||||||||||||||||||| |||   | |||  ||||||||||| ||||||||||||||||||  || ||||| ||||| |||    
T  46719847 tgattgtgcattatgttaatcaaaatagtctcttatgttagttttttttgttaatattatcgtattagtccctcaatatatttatttattatcataccag 46719946  T
Q  688 tc 689  Q
    ||    
T  46719947 tc 46719948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 579 - 707
Target Start/End: Original strand, 12927643 - 12927771
Alignment:
Q  579 aatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctcaatatacgtacttattg 678  Q
    |||| |||||||||||||||| | ||| |||||||||||  | |||||||||| |||  |||||||| |||| ||||| | |||||| || || ||||||    
T  12927643 aatagtccttgattgtgcactttgttagtcaaaatagtccttcatattaaaatattttgttaatattgtcatgttagttcttcaatagacttagttattg 12927742  T
Q  679 tcatatcagtcattataaatacttactta 707  Q
    ||||||  ||| |||||  ||||||||||    
T  12927743 tcatatttgtccttatacgtacttactta 12927771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 561 - 701
Target Start/End: Original strand, 32996289 - 32996429
Alignment:
Q  561 aatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccct 660  Q
    |||||||| |||||| |||||| ||  ||||||| ||||  |||  | |||||||||||| |||||||| |  ||  |||||||| |||||||||||| |    
T  32996289 aatgtatcgaaatttaaaaatagtctctgattgtacacttcatttgttaaaatagtctctaatattaaattaatttgttaatattgtcatattagtcctt 32996388  T
Q  661 caatatacgtacttattgtcatatcagtcattataaatact 701  Q
    |||||||| || ||||| |||||| |||| |||||| ||||    
T  32996389 caatatacttatttattatcatattagtccttataagtact 32996429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 569 - 657
Target Start/End: Original strand, 38838525 - 38838613
Alignment:
Q  569 aaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtc 657  Q
    |||||||||||||| |||||||||||||||| |  || ||||||||||| || ||||||||||  ||  ||||||||||||| ||||||    
T  38838525 aaaattttaaaatagtccttgattgtgcacttttctagtcaaaatagtccctaatattaaaataatttgttaatattatcatgttagtc 38838613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 758 - 848
Target Start/End: Original strand, 46720000 - 46720091
Alignment:
Q  758 tattttaacgtcagagactattt-gactagcaaagtgtataatcaaagactattttaaaatttcaatacatttaaagactattgtgattact 848  Q
    ||||||||||||| | ||||||| ||||| ||||||| | ||||||| || ||||||||||||||||||||| |  ||||||||||| ||||    
T  46720000 tattttaacgtcaaaaactattttgactaacaaagtgcacaatcaaataccattttaaaatttcaatacattgagggactattgtgactact 46720091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 788 - 865
Target Start/End: Original strand, 8062884 - 8062961
Alignment:
Q  788 aaagtgtataatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcattacacatttaagga 865  Q
    |||||| | ||||| | ||||||||||||||| |||||||| | |||||||||||| ||||| ||||||||| |||||    
T  8062884 aaagtgcaaaatcagatactattttaaaattttaatacattgacagactattgtgactactcgttacacattcaagga 8062961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 778 - 859
Target Start/End: Original strand, 38838650 - 38838731
Alignment:
Q  778 tttgactagcaaagtgtataatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcattacacatt 859  Q
    |||||||| |||| || | ||||| ||||||||||||||||| |||||||| | ||| |||||||| ||||| |||||||||    
T  38838650 tttgactaacaaaatgcaaaatcagagactattttaaaattttaatacattgatagaatattgtgactactcgttacacatt 38838731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 625 - 714
Target Start/End: Complemental strand, 49078208 - 49078119
Alignment:
Q  625 ttaaaatgtttctttaatattatcatattagtccctcaatatacgtacttattgtcatatcagtcattataaatacttacttatcgtcat 714  Q
    |||||||||||| |||||||| |||||| | ||| ||||||||  |  | |||||||||||| |||||||||||||||| |||| |||||    
T  49078208 ttaaaatgtttcattaatattgtcatatcaatccttcaatatatttgttaattgtcatatcaatcattataaatacttagttattgtcat 49078119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 778 - 846
Target Start/End: Complemental strand, 8929553 - 8929485
Alignment:
Q  778 tttgactagcaaagtgtataatcaaagactattttaaaatttcaatacatttaaagactattgtgatta 846  Q
    |||||||| ||||||| | ||||||| ||||||||||||||| |||||||| ||||||| |||| ||||    
T  8929553 tttgactaacaaagtgcaaaatcaaaaactattttaaaattttaatacattaaaagactgttgtaatta 8929485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 772 - 859
Target Start/End: Original strand, 12849715 - 12849803
Alignment:
Q  772 agactattt-gactagcaaagtgtataatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcattacacatt 859  Q
    ||||||||| ||||| ||||||| | ||||| ||||||||||  |||||  ||||||| |||||||||||||| |||||||| ||||||    
T  12849715 agactatttcgactaacaaagtgcacaatcagagactattttgtaattttgatacattaaaagactattgtgactactcattgcacatt 12849803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 552 - 651
Target Start/End: Original strand, 14239779 - 14239878
Alignment:
Q  552 tagtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcata 651  Q
    ||||| ||||||||||| |||||| |||||  ||||| ||||| || ||||||| |||||||||||  |||  ||||||||| |||||| |||| |||||    
T  14239779 tagtcacttaatgtatcgaaatttaaaaattatccttaattgtacaatatattagtcaaaatagtcatttacgttaaaatgtctctttattattttcata 14239878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 759 - 849
Target Start/End: Complemental strand, 24488364 - 24488273
Alignment:
Q  759 attttaacgtcagagactattt-gactagcaaagtgtataatcaaagactattttaaaatttcaatacatttaaagactattgtgattactc 849  Q
    |||||||| ||| ||||||||| || | | |||||| ||||||||||| ||||||||||||  |||||||| || |||||||||| ||||||    
T  24488364 attttaacttcaaagactattttgatttgtaaagtgaataatcaaagaatattttaaaattataatacattaaaggactattgtggttactc 24488273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 628 - 702
Target Start/End: Original strand, 3116914 - 3116988
Alignment:
Q  628 aaatgtttctttaatattatcatattagtccctcaatatacgtacttattgtcatatcagtcattataaatactt 702  Q
    |||| |||| |||||||| |||||||||||  ||||||||| |||||||| | ||||||||| |||||| |||||    
T  3116914 aaatatttcattaatattgtcatattagtctttcaatatacttacttattattatatcagtctttataagtactt 3116988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 570 - 839
Target Start/End: Original strand, 23457610 - 23457880
Alignment:
Q  570 aaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctcaatatacg 669  Q
    ||||||||||||| ||  ||||| |||| ||| ||| || ||||| | | | | |||||||| |||| |||||||| |||||||| ||| || |||||      
T  23457610 aaattttaaaatagtctatgattatgcattatgttagtctaaataatttataacattaaaatatttcattaatattttcatattaatccatcgatataat 23457709  T
Q  670 tacttattgtcatatcagtcattataaatacttacttatcgtcatatcaattcatatataagaagagctaacgtcggcattgagttaatattttaacgtc 769  Q
    ||| ||||||| |||||| || ||||| |||||| |||  |||||| ||  || | ||| | ||||| ||| |||  |||||||  | |||||||||       
T  23457710 tacatattgtcctatcagccactataagtacttagttactgtcataccatgtcctttatgaaaagagttaatgtcaccattgagagactattttaacaca 23457809  T
Q  770 agagacta-tttgactagcaaagtgtataatcaaagactattttaaaatttcaatacatttaaagactatt 839  Q
    | | |||| ||||| || ||||||| | ||||||  |||||||||||||||| ||||||| || |||||||    
T  23457810 aaaaactattttgattaacaaagtgcacaatcaataactattttaaaatttcgatacattgaaggactatt 23457880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 561 - 631
Target Start/End: Original strand, 23474559 - 23474629
Alignment:
Q  561 aatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaat 631  Q
    |||||||||||||||||||||| |  |||||||||||||   |||||||||||||| | |||| |||||||    
T  23474559 aatgtatcaaaattttaaaatagttattgattgtgcacttcgttaatcaaaatagttttttatgttaaaat 23474629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 797 - 882
Target Start/End: Complemental strand, 5358290 - 5358205
Alignment:
Q  797 aatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcattacacatttaaggaataaaaggactattatc 882  Q
    ||||| |||||||||||||||||  ||||||| || ||||||||| | || |||||||||||||| |||  |||  ||||||||||    
T  5358290 aatcagagactattttaaaattttgatacattgaaggactattgtaactattcattacacatttagggatgaaagtgactattatc 5358205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 552 - 617
Target Start/End: Complemental strand, 14669560 - 14669495
Alignment:
Q  552 tagtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtc 617  Q
    |||||||| |||||||||||||| ||||||| | |||||||||||||| | ||| ||||| |||||    
T  14669560 tagtctctcaatgtatcaaaattctaaaatagttcttgattgtgcactctgttagtcaaagtagtc 14669495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 782 - 859
Target Start/End: Complemental strand, 25689053 - 25688976
Alignment:
Q  782 actagcaaagtgtataatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcattacacatt 859  Q
    |||| ||||||| | ||||| | | ||||||| ||||| |||||||| | ||||||||||||||| ||||||||||||    
T  25689053 actaacaaagtgcaaaatcagaaattattttagaattttaatacattgagagactattgtgattattcattacacatt 25688976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 607 - 716
Target Start/End: Original strand, 29778695 - 29778804
Alignment:
Q  607 tcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctcaatatacgtacttattgtcatatcagtcattataaatacttactt 706  Q
    |||||||| ||  |||| |||||||||||| |||||||| |||||||||||| |||| |||  || | |||||||||||| || |||||  || ||| ||    
T  29778695 tcaaaataatcatttatgttaaaatgtttcgttaatattgtcatattagtccgtcaacatatttattcattgtcatatcaatccttatatttatttattt 29778794  T
Q  707 atcgtcatat 716  Q
    || |||||||    
T  29778795 attgtcatat 29778804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 758 - 882
Target Start/End: Original strand, 39608564 - 39608689
Alignment:
Q  758 tattttaacgtcagagactattt-gactagcaaagtgtataatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcattacac 856  Q
    ||||||  ||||| ||| ||||| ||||| |||| |||| |||  || |||||||||||||||  ||||||| ||| |||||||| | ||||| ||||||    
T  39608564 tattttcgcgtcaaagattattttgactaacaaattgtacaattcaaaactattttaaaattttgatacattgaaaaactattgtaactactccttacac 39608663  T
Q  857 atttaaggaataaaaggactattatc 882  Q
    ||| ||||| ||||| || |||||||    
T  39608664 attcaaggactaaaatgattattatc 39608689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 624 - 839
Target Start/End: Complemental strand, 23474764 - 23474548
Alignment:
Q  624 attaaaatgtttctttaatattatcatattagtccctcaatatacgtacttattgtcatatcagtcattataaatacttacttatcgtcatatcaattca 723  Q
    |||||||| |||| |||||||| |||||||| ||| || |||||  ||||||||||| |||||| || ||||| |||||| |||  |||||| ||  ||     
T  23474764 attaaaatatttcattaatattttcatattaatccatcgatatatttacttattgtcctatcagccactataagtacttagttactgtcataccatgtcc 23474665  T
Q  724 tatataagaagagctaacgtcggcattgagttaatattttaacgtcagagacta-tttgactagcaaagtgtataatcaaagactattttaaaatttcaa 822  Q
    | ||| | ||||| ||| |||  |||||||  | ||||||||| | | | |||| ||||| || | ||||| | ||||||  |||||||||||||||  |    
T  23474664 tttatgaaaagagttaatgtcaccattgagagattattttaacataaaaaactattttgattaacgaagtgcacaatcaataactattttaaaattttga 23474565  T
Q  823 tacatttaaagactatt 839  Q
    |||||| || |||||||    
T  23474564 tacattgaaggactatt 23474548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 561 - 677
Target Start/End: Original strand, 27080808 - 27080923
Alignment:
Q  561 aatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccct 660  Q
    ||||||||||| |||| ||| | || ||||||||||||||   || |||||||||||  | | ||||||||  ||||||||||||||||||||| ||| |    
T  27080808 aatgtatcaaattttttaaa-agtctttgattgtgcactacgctagtcaaaatagtccataacattaaaatacttctttaatattatcatattaatcctt 27080906  T
Q  661 caatatacgtacttatt 677  Q
    ||  |||| ||||||||    
T  27080907 cagcatacttacttatt 27080923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 561 - 677
Target Start/End: Complemental strand, 27197493 - 27197378
Alignment:
Q  561 aatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccct 660  Q
    ||||||||||| |||| ||| | || ||||||||||||||   || |||||||||||  | | ||||||||  ||||||||||||||||||||| ||| |    
T  27197493 aatgtatcaaattttttaaa-agtctttgattgtgcactacgctagtcaaaatagtccataacattaaaatacttctttaatattatcatattaatcctt 27197395  T
Q  661 caatatacgtacttatt 677  Q
    ||  |||| ||||||||    
T  27197394 cagcatacttacttatt 27197378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 761 - 827
Target Start/End: Original strand, 3117046 - 3117113
Alignment:
Q  761 tttaacgtcagagactattt-gactagcaaagtgtataatcaaagactattttaaaatttcaatacat 827  Q
    |||| ||||||||||||||| ||||||||||||| | ||| |  |||||||||||||||| |||||||    
T  3117046 tttagcgtcagagactattttgactagcaaagtgaacaattagggactattttaaaattttaatacat 3117113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 561 - 616
Target Start/End: Original strand, 5358259 - 5358314
Alignment:
Q  561 aatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagt 616  Q
    |||||||||||||||||||||| ||  |||||||| ||| ||||| ||||||||||    
T  5358259 aatgtatcaaaattttaaaatagtctctgattgtgtactctattagtcaaaatagt 5358314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 561 - 616
Target Start/End: Complemental strand, 23457869 - 23457814
Alignment:
Q  561 aatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagt 616  Q
    |||||||| ||||||||||||| |  ||||||||||||| | ||||||||||||||    
T  23457869 aatgtatcgaaattttaaaatagttattgattgtgcactttgttaatcaaaatagt 23457814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 609 - 675
Target Start/End: Original strand, 24325440 - 24325507
Alignment:
Q  609 aaaatagtctcttatattaaaatgttt-ctttaatattatcatattagtccctcaatatacgtactta 675  Q
    |||||||||||| ||||| |||| ||| | |||||||||||||||| |||| ||||||||| ||||||    
T  24325440 aaaatagtctctaatattgaaattttttcattaatattatcatattggtccttcaatatacttactta 24325507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 559 - 645
Target Start/End: Original strand, 24488292 - 24488378
Alignment:
Q  559 ttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatatt 645  Q
    ||||||||| | |||||||||||| || |||||| | |||| ||  |||||||||||||| | |  |||||||||||| ||||||||    
T  24488292 ttaatgtattataattttaaaatattctttgattattcactttacaaatcaaaatagtctttgaagttaaaatgtttcattaatatt 24488378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 552 - 618
Target Start/End: Complemental strand, 32996565 - 32996499
Alignment:
Q  552 tagtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtct 618  Q
    ||||| || |||| ||||||||| ||||||| ||  |||||||||||| | ||||||||||||||||    
T  32996565 tagtccctcaatgcatcaaaattctaaaatagtctctgattgtgcactttgttaatcaaaatagtct 32996499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 802 - 855
Target Start/End: Complemental strand, 1247576 - 1247523
Alignment:
Q  802 aagactattttaaaatttcaatacatttaaagactattgtgattactcattaca 855  Q
    |||||||||||||||||| |||||||| | | |||||||||| ||||| |||||    
T  1247576 aagactattttaaaattttaatacattaagaaactattgtgactactcgttaca 1247523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 798 - 855
Target Start/End: Original strand, 5362460 - 5362517
Alignment:
Q  798 atcaaagactattttaaaatttcaatacatttaaagactattgtgattactcattaca 855  Q
    ||||||||||||||||||||||  ||||||| || || |||||||| ||||| |||||    
T  5362460 atcaaagactattttaaaattttgatacattgaatgattattgtgactactccttaca 5362517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 758 - 810
Target Start/End: Original strand, 21401957 - 21402010
Alignment:
Q  758 tattttaacgtcagagactattt-gactagcaaagtgtataatcaaagactatt 810  Q
    ||||||| ||||||||||||||| ||||| ||||||| | ||||||||||||||    
T  21401957 tattttagcgtcagagactatttcgactaacaaagtgcacaatcaaagactatt 21402010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 559 - 616
Target Start/End: Original strand, 37502217 - 37502274
Alignment:
Q  559 ttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagt 616  Q
    ||||| |||||||||||||||||| ||  ||||| |||| ||| ||||||||||||||    
T  37502217 ttaatatatcaaaattttaaaataatcaatgattatgcattatgttaatcaaaatagt 37502274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 778 - 859
Target Start/End: Complemental strand, 38838567 - 38838487
Alignment:
Q  778 tttgactagcaaagtgtataatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcattacacatt 859  Q
    ||||||||| |||||| | |||||| |||||||||||||||| || ||||  |  |||||||||| |||||| |||||||||    
T  38838567 tttgactagaaaagtgcacaatcaaggactattttaaaattttaa-acatcgatggactattgtggttactccttacacatt 38838487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 798 - 847
Target Start/End: Complemental strand, 39791907 - 39791858
Alignment:
Q  798 atcaaagactattttaaaatttcaatacatttaaagactattgtgattac 847  Q
    |||||||||||||||  |||||||||||||| | ||||||||||| ||||    
T  39791907 atcaaagactattttggaatttcaatacattgagagactattgtggttac 39791858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 663 - 708
Target Start/End: Complemental strand, 42337043 - 42336998
Alignment:
Q  663 atatacgtacttattgtcatatcagtcattataaatacttacttat 708  Q
    |||||| ||||||||||||||||| || ||||||||||||| ||||    
T  42337043 atatacttacttattgtcatatcaatccttataaatacttatttat 42336998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 51; Significance: 1e-19; HSPs: 5)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 561 - 827
Target Start/End: Original strand, 89061 - 89326
Alignment:
Q  561 aatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccct 660  Q
    |||||||| ||||| ||||||| ||| |||||||| ||| ||||| |||||||| |||||  | ||||||| |||  | |||||| |||||| |||||||    
T  89061 aatgtatcgaaattgtaaaatagtccgtgattgtgaactttattagtcaaaataatctctcgtgttaaaatattttgtcaatattgtcatatcagtccct 89160  T
Q  661 caatatacgtacttattgtcatatcagtcattataaatacttacttatcgtcatatcaattcatatataagaagagctaacgtcggcattgagttaatat 760  Q
     ||||| | | |||| | | |||||| || ||||||||| ||||||||  || ||||||  ||||||  | || |  ||  |||  |||||||  | |||    
T  89161 aaatatgcttgcttagtataatatcaatccttataaatatttacttattttcgtatcaaaccatataagaaaaaat-tattgtcaacattgagggactat 89259  T
Q  761 tttaacgtcagagactatttgactagcaaagtgtataatcaaagactattttaaaatttcaatacat 827  Q
    ||||||||||| |||||||||| |||||||||| | |||||| ||||||||| |||| || ||||||    
T  89260 tttaacgtcagtgactatttgattagcaaagtgcacaatcaatgactattttgaaatctcgatacat 89326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 577 - 843
Target Start/End: Original strand, 109075 - 109340
Alignment:
Q  577 aaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctcaatatacgtacttat 676  Q
    |||||| |||||||||||| ||| ||||| |||||||||| |||    | ||||| |||| | |||||| |||||| |||| || ||||||| | ||||     
T  109075 aaaatagtccttgattgtgaactttattagtcaaaatagtttctcgcgtaaaaatatttcgtcaatattgtcatatcagtctctaaatatacttgcttag 109174  T
Q  677 tgtcatatcagtcattataaatacttacttatcgtcatatcaattcatatataagaagagctaacgtcggcattgagttaatattttaacgtcagagact 776  Q
    | | |||||| ||  |||||||| ||||||||  || ||||||| ||||||  | || || ||  |||  ||| |||  | |||||||||||||| ||||    
T  109175 tataatatcaatccctataaatatttacttattttcgtatcaatccatataagaaaa-agttattgtcaacatcgagggactattttaacgtcagtgact 109273  T
Q  777 atttgactagcaaagtgtataatcaaagactattttaaaatttcaatacatttaaagactattgtga 843  Q
    ||||||||||||||||| | | |||| ||||||||||||||||| ||||||  |  |||||||||||    
T  109274 atttgactagcaaagtgcacattcaatgactattttaaaatttcgatacatacagggactattgtga 109340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 798 - 880
Target Start/End: Complemental strand, 328847 - 328765
Alignment:
Q  798 atcaaagactattttaaaatttcaatacatttaaagactattgtgattactcattacacatttaaggaataaaaggactatta 880  Q
    |||||||| |||||||||||||| ||||||| ||||||||||||  ||| |||||| ||||||||||| ||||| ||||||||    
T  328847 atcaaagattattttaaaatttcgatacattgaaagactattgtagttattcattatacatttaaggattaaaacgactatta 328765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #4
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 561 - 620
Target Start/End: Original strand, 104385 - 104444
Alignment:
Q  561 aatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctct 620  Q
    ||||||| |||||| ||||||| |||||||||||| ||| ||||| ||||||||||||||    
T  104385 aatgtattaaaattctaaaatagtccttgattgtgaactgtattagtcaaaatagtctct 104444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #5
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 552 - 685
Target Start/End: Original strand, 328808 - 328941
Alignment:
Q  552 tagtctcttaatgtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcata 651  Q
    |||||| | |||||||| ||||||||||||| || ||||| || || | | | | ||||||| |||||  | ||||||||||||  || ||||| |||||    
T  328808 tagtctttcaatgtatcgaaattttaaaataatctttgatggtacaatttgtcagtcaaaatcgtctccgacattaaaatgttttgttgatattgtcata 328907  T
Q  652 ttagtccctcaatatacgtacttattgtcatatc 685  Q
    ||||| | |||||| || |||||||| |||||||    
T  328908 ttagttcttcaatacacttacttattatcatatc 328941  T

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Target: scaffold0002 (Bit Score: 48; Significance: 7e-18; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 579 - 714
Target Start/End: Complemental strand, 349232 - 349097
Alignment:
Q  579 aatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctcaatatacgtacttattg 678  Q
    |||| |||||| |||| |||| | ||| |||||||||||| | |||||||||| |||| |||||||| |||| ||||| | |||||| || || ||||||    
T  349232 aatagtccttggttgttcacttttttagtcaaaatagtctttgatattaaaatatttcgttaatattgtcatgttagttcttcaatagacttagttattg 349133  T
Q  679 tcatatcagtcattataaatacttacttatcgtcat 714  Q
    |||||| |||| |||||  ||||||||||| |||||    
T  349132 tcatattagtccttatacgtacttacttattgtcat 349097  T

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Target: scaffold0045 (Bit Score: 45; Significance: 4e-16; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 588 - 708
Target Start/End: Original strand, 20614 - 20733
Alignment:
Q  588 tgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctcaatatacgtacttattgtcatatcag 687  Q
    |||||||| | | ||||| |||||||||||  |  ||||||||| |||| |||||||| |||||||||||| |||||| || || |||||||||||| ||    
T  20614 tgattgtgtagtttattagtcaaaatagtcattgttattaaaatatttcattaatattgtcatattagtccttcaatagactta-ttattgtcatattag 20712  T
Q  688 tcattataaatacttacttat 708  Q
    || ||||| ||||||||||||    
T  20713 tccttatacatacttacttat 20733  T

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Target: scaffold0005 (Bit Score: 44; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 579 - 714
Target Start/End: Complemental strand, 29482 - 29347
Alignment:
Q  579 aatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctcaatatacgtacttattg 678  Q
    |||| |||||| |||| |||| | ||| |||||||||||| | ||||||| || |||| |||||||| |||| ||||| | |||||| || || |||||     
T  29482 aatagtccttggttgttcactttgttagtcaaaatagtctttgatattaatatatttcgttaatattgtcatgttagttcttcaatagacttagttattt 29383  T
Q  679 tcatatcagtcattataaatacttacttatcgtcat 714  Q
    |||||| |||| ||||| |||||||||||| |||||    
T  29382 tcatattagtccttatacatacttacttattgtcat 29347  T

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Target: scaffold0005; HSP #2
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 564 - 617
Target Start/End: Original strand, 29235 - 29288
Alignment:
Q  564 gtatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtc 617  Q
    |||||||||||| |||||| | ||||||||| |||| ||||| |||||||||||    
T  29235 gtatcaaaatttcaaaatagttcttgattgtccactttattagtcaaaatagtc 29288  T

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Target: scaffold0102 (Bit Score: 39; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 565 - 688
Target Start/End: Original strand, 27099 - 27218
Alignment:
Q  565 tatcaaaattttaaaatactccttgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctcaat 664  Q
    |||||||||||||||||| || |||||||||||||   |||||||||||||||||    |||||| ||||||  || |||| |||||| ||||  |||||    
T  27099 tatcaaaattttaaaataatctttgattgtgcacttcgttaatcaaaatagtctc----attaaattgtttcgctagtattgtcatatcagtcattcaat 27194  T
Q  665 atacgtacttattgtcatatcagt 688  Q
    |||| || ||||||| || |||||    
T  27195 atacttatttattgttatttcagt 27218  T

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Target: scaffold0211 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 588 - 681
Target Start/End: Original strand, 20063 - 20156
Alignment:
Q  588 tgattgtgcactatattaatcaaaatagtctcttatattaaaatgtttctttaatattatcatattagtccctcaatatacgtacttattgtca 681  Q
    ||||||| ||||  |||| |||||||||||||| | ||| ||||  ||| || ||||| |||||||||||| ||||||||| || |||||||||    
T  20063 tgattgtacacttcattagtcaaaatagtctctaacattcaaatacttcattgatattgtcatattagtccttcaatatacttatttattgtca 20156  T

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Target: scaffold0050 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 778 - 880
Target Start/End: Complemental strand, 81397 - 81295
Alignment:
Q  778 tttgactagcaaagtgtataatcaaagactattttaaaatttcaatacatttaaagactattgtgattactcattacacatttaaggaataaaaggacta 877  Q
    |||||||| | ||||| | ||||| | |||||||| ||||||||||||| | | | |||||||||  |||||||| |||||| |||||  |||| |||||    
T  81397 tttgactaacgaagtgcacaatcataaactattttgaaatttcaatacaatcagatactattgtggctactcattgcacattcaaggatcaaaatgacta 81298  T
Q  878 tta 880  Q
    |||    
T  81297 tta 81295  T

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