View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2209-Insertion-3 (Length: 689)

Name: NF2209-Insertion-3
Description: NF2209
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2209-Insertion-3
NF2209-Insertion-3
[»] chr6 (1 HSPs)
chr6 (8-689)||(10625788-10626469)


Alignment Details
Target: chr6 (Bit Score: 642; Significance: 0; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 642; E-Value: 0
Query Start/End: Original strand, 8 - 689
Target Start/End: Original strand, 10625788 - 10626469
Alignment:
Q  8 ctacttgttgaatctgaacgttcaatttttgaatgttcgcgaaacacttcttccaatgtgtctttatactcacatgagagtcgtagatagttaattatgt 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10625788 ctacttgttgaatctgaacgttcaatttttgaatgttcgcgaaacacttcttccaatgtgtctttatactcacatgagagtcgtagatagttaattatgt 10625887  T
Q  108 agcgagttagcggatgaattgcgccccccgcaactggagtttttccattatcattttttattgagttttcgagttcgcaaaatattaacaccgcaacctc 207  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10625888 agcgagttagcggatgaattgcgccccccgcaactggggtttttccattatcattttttattgagttttcgagttcgcaaaatattaacaccgcaacctc 10625987  T
Q  208 tccgagtcgattctttgctgatgtcatttcagctttgatttcatcgacaatgtcctttgggaagagtttttccaagtttggaattgtatctcttaaagtc 307  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10625988 tccgagtcgattcttggctgatgtcatttcagctttgatttcatcgacaatgtcctttgggaagagtttttccaagtttggaattgtatctcttaaagtc 10626087  T
Q  308 tcatacatgtctagtgacttaaagagcttctccgcagcgcgttttgccatcgcgacactttcagcaaaattgagaagctgaaacaccactacacgcgtca 407  Q
    || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10626088 tcgtacatgtctagagacttaaagagcttctccgcagcgcgttttgccatcgcgacactttcagcaaaattgagaagctgaaacaccactacacgcgtca 10626187  T
Q  408 ggttggtgtagagtgtgtctgccaccgatggatcctcagagaaaattgaagcaacaagcttccgttctccggggaaccacacagtggcacattctttaaa 507  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  10626188 ggttggtgtagagtgtgtctgccatcgatggatcctcagagaaaattgaagcaacaagcttcctttctccggggaaccacacagtggcacattctttaaa 10626287  T
Q  508 tgtgttaatccatgctggaatctctctttcaagtgattcccattgcattttttggacctcgtcgatgctgatcctttcatacccaagcttgtgcaaaccg 607  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||     
T  10626288 tgtgttaatccatgttggaatctctctttcaagtgattcccattgcattctttggacctcgtcgatgctgatcctttcatacccaagcttgtgcaaacca 10626387  T
Q  608 tcgccaaaactgtgctttctagaaacaatgtacacatgacaacactctgaatcgtaacctgcgaataacatttcacgcgcta 689  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  10626388 tcgccaaaactgtgctttctagaaacaatgtacacatgacaacactctgaatcgtaacctgcaaataacatttcacgcgcta 10626469  T

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