View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2210-Insertion-15 (Length: 368)
Name: NF2210-Insertion-15
Description: NF2210
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2210-Insertion-15 |
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Alignment Details
Target: chr1 (Bit Score: 185; Significance: 1e-100; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 8 - 192
Target Start/End: Original strand, 32556094 - 32556278
Alignment:
| Q |
8 |
ctaatactatataccaaataaagtgaatgaagaatataaatatcatatacaaagattatgctcacaagttgtatcaacccataaaaaggttgcactagtg |
107 |
Q |
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| T |
32556094 |
ctaatactatataccaaataaagtgaatgaagaatataaatatcatatacaaagattatgctcacaagttgtatcaacccataaaaaggttgcactagtg |
32556193 |
T |
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| Q |
108 |
gagctcaattgagtagtttcttttatattagttagaaactactatatttttcttgttttgttacattcaagggcataagcccatc |
192 |
Q |
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| T |
32556194 |
gagctcaattgagtagtttcttttatattagttagaaactactatatttttcttgttttgttacattcaagggcataagcccatc |
32556278 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 256 - 368
Target Start/End: Original strand, 32556342 - 32556454
Alignment:
| Q |
256 |
catgaatccgatttgtttaagaaaaagataaaagtatccctagaaatgttttaaaagtctatacttaggtgtgaccataccgtttcatacatatattata |
355 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
32556342 |
catgaatccgatttgtttaagaaaaagataaaagtatccctagaaatgttttaaaagtctatacttaggtgtgacaataccgtttcatacatatattata |
32556441 |
T |
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| Q |
356 |
gattccttctatt |
368 |
Q |
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| T |
32556442 |
gattccttctatt |
32556454 |
T |
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