View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2210-Insertion-7 (Length: 753)

Name: NF2210-Insertion-7
Description: NF2210
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2210-Insertion-7
NF2210-Insertion-7
[»] chr6 (28 HSPs)
chr6 (8-753)||(12635157-12635901)
chr6 (12-131)||(8932625-8932744)
chr6 (12-131)||(8944091-8944210)
chr6 (12-130)||(30788880-30788996)
chr6 (22-131)||(21898612-21898721)
chr6 (12-131)||(5253250-5253369)
chr6 (12-117)||(12606408-12606513)
chr6 (635-734)||(11363708-11363808)
chr6 (390-576)||(11364076-11364262)
chr6 (8-129)||(6606120-6606241)
chr6 (22-131)||(19089462-19089571)
chr6 (380-436)||(11341293-11341349)
chr6 (28-131)||(13036047-13036150)
chr6 (22-128)||(29444802-29444908)
chr6 (30-131)||(10311514-10311615)
chr6 (14-131)||(14107387-14107504)
chr6 (24-117)||(29333178-29333270)
chr6 (12-131)||(2271330-2271447)
chr6 (8-127)||(13468901-13469020)
chr6 (12-68)||(9633652-9633708)
chr6 (38-113)||(3587998-3588073)
chr6 (12-131)||(8612001-8612120)
chr6 (57-131)||(9179808-9179882)
chr6 (22-131)||(9366460-9366569)
chr6 (22-131)||(24671903-24672012)
chr6 (12-102)||(3601077-3601167)
chr6 (22-131)||(19230596-19230703)
chr6 (34-131)||(21016800-21016897)
[»] chr7 (35 HSPs)
chr7 (8-131)||(34659189-34659312)
chr7 (8-131)||(48804646-48804769)
chr7 (8-131)||(10047899-10048022)
chr7 (29-131)||(47341839-47341941)
chr7 (7-112)||(17748404-17748509)
chr7 (27-131)||(1797423-1797527)
chr7 (12-112)||(38578894-38578994)
chr7 (8-131)||(4195225-4195348)
chr7 (12-131)||(21530711-21530830)
chr7 (38-131)||(18785632-18785725)
chr7 (12-131)||(5069842-5069961)
chr7 (12-131)||(42210289-42210408)
chr7 (17-131)||(43346811-43346925)
chr7 (29-131)||(43925475-43925577)
chr7 (12-117)||(1605918-1606023)
chr7 (8-131)||(4228777-4228897)
chr7 (12-127)||(13095825-13095940)
chr7 (30-117)||(21190825-21190912)
chr7 (12-131)||(22993394-22993513)
chr7 (22-117)||(43862009-43862104)
chr7 (22-128)||(39420804-39420909)
chr7 (22-131)||(42032059-42032168)
chr7 (8-112)||(14535273-14535377)
chr7 (12-131)||(19914730-19914848)
chr7 (28-131)||(26423330-26423433)
chr7 (38-133)||(45447931-45448026)
chr7 (12-131)||(45960030-45960148)
chr7 (12-86)||(41945482-41945555)
chr7 (38-127)||(27028246-27028335)
chr7 (8-109)||(36619277-36619378)
chr7 (9-117)||(37514898-37515006)
chr7 (12-96)||(49142696-49142780)
chr7 (44-131)||(22268088-22268175)
chr7 (28-117)||(22973944-22974033)
chr7 (22-131)||(23658143-23658251)
[»] chr4 (45 HSPs)
chr4 (8-133)||(47078421-47078546)
chr4 (12-131)||(5472875-5472994)
chr4 (8-131)||(29895752-29895875)
chr4 (11-131)||(1446791-1446911)
chr4 (12-131)||(38165992-38166111)
chr4 (8-112)||(3159492-3159596)
chr4 (12-131)||(36262794-36262911)
chr4 (12-131)||(41162909-41163028)
chr4 (8-128)||(41339418-41339538)
chr4 (12-112)||(49260692-49260792)
chr4 (12-131)||(20532436-20532555)
chr4 (38-117)||(40272384-40272463)
chr4 (12-128)||(1940804-1940917)
chr4 (22-131)||(29588701-29588810)
chr4 (12-112)||(7246673-7246773)
chr4 (28-131)||(24166415-24166518)
chr4 (12-131)||(43458578-43458697)
chr4 (12-122)||(3507245-3507354)
chr4 (22-131)||(53599025-53599134)
chr4 (12-131)||(2559272-2559391)
chr4 (12-131)||(6779176-6779295)
chr4 (12-127)||(36145242-36145357)
chr4 (12-131)||(55920999-55921118)
chr4 (22-112)||(38075417-38075507)
chr4 (22-112)||(48015110-48015200)
chr4 (12-97)||(30317232-30317317)
chr4 (11-112)||(43468331-43468432)
chr4 (8-112)||(20128293-20128397)
chr4 (8-92)||(20354641-20354725)
chr4 (12-131)||(27248393-27248510)
chr4 (22-117)||(42722614-42722709)
chr4 (11-105)||(42722405-42722498)
chr4 (38-128)||(52950050-52950140)
chr4 (12-117)||(8889001-8889106)
chr4 (31-128)||(33647689-33647786)
chr4 (22-126)||(38168227-38168330)
chr4 (12-131)||(3574473-3574592)
chr4 (17-68)||(8424582-8424633)
chr4 (8-131)||(14123981-14124104)
chr4 (28-94)||(10541018-10541084)
chr4 (12-70)||(17080069-17080127)
chr4 (31-108)||(295579-295655)
chr4 (82-131)||(6032737-6032786)
chr4 (56-97)||(13436811-13436852)
chr4 (28-129)||(20421741-20421841)
[»] scaffold0002 (3 HSPs)
scaffold0002 (12-131)||(319385-319504)
scaffold0002 (38-102)||(139427-139491)
scaffold0002 (56-117)||(412097-412158)
[»] chr8 (24 HSPs)
chr8 (8-131)||(2467141-2467264)
chr8 (28-131)||(38922457-38922560)
chr8 (13-131)||(14666099-14666217)
chr8 (13-131)||(8141066-8141184)
chr8 (22-131)||(1013014-1013123)
chr8 (12-131)||(15884583-15884701)
chr8 (12-131)||(44893305-44893424)
chr8 (22-131)||(17981405-17981514)
chr8 (11-98)||(6042818-6042905)
chr8 (22-129)||(6100438-6100545)
chr8 (12-131)||(45521133-45521251)
chr8 (14-131)||(13085488-13085605)
chr8 (12-131)||(43032865-43032984)
chr8 (45-131)||(6940522-6940608)
chr8 (8-131)||(9860018-9860142)
chr8 (14-131)||(7673686-7673800)
chr8 (22-109)||(10927592-10927679)
chr8 (12-131)||(24837206-24837325)
chr8 (12-131)||(33401826-33401945)
chr8 (28-131)||(34846778-34846880)
chr8 (14-112)||(44031464-44031567)
chr8 (22-131)||(18373974-18374083)
chr8 (12-128)||(2964043-2964159)
chr8 (28-117)||(11785894-11785982)
[»] chr2 (44 HSPs)
chr2 (8-131)||(6358174-6358297)
chr2 (12-117)||(10823034-10823139)
chr2 (12-131)||(3643914-3644033)
chr2 (12-131)||(25540431-25540550)
chr2 (12-131)||(38005362-38005481)
chr2 (22-132)||(41220594-41220704)
chr2 (17-131)||(45263699-45263813)
chr2 (11-112)||(44139463-44139564)
chr2 (12-116)||(9360775-9360879)
chr2 (8-131)||(34356166-34356289)
chr2 (13-131)||(8410091-8410209)
chr2 (12-128)||(44945557-44945672)
chr2 (12-131)||(331461-331580)
chr2 (12-131)||(38962723-38962842)
chr2 (8-98)||(12455303-12455393)
chr2 (29-131)||(21286404-21286506)
chr2 (27-131)||(20612577-20612682)
chr2 (8-117)||(35946713-35946821)
chr2 (38-131)||(39806938-39807031)
chr2 (12-131)||(18902557-18902676)
chr2 (12-131)||(19976834-19976953)
chr2 (12-131)||(37560133-37560252)
chr2 (22-131)||(7747234-7747343)
chr2 (14-107)||(7787040-7787133)
chr2 (12-117)||(11069852-11069957)
chr2 (16-112)||(15079462-15079558)
chr2 (12-131)||(22593095-22593213)
chr2 (12-131)||(41031933-41032051)
chr2 (12-131)||(42770678-42770797)
chr2 (13-131)||(2550828-2550946)
chr2 (8-112)||(16034916-16035020)
chr2 (8-131)||(12864184-12864307)
chr2 (12-131)||(29422175-29422294)
chr2 (17-131)||(21180346-21180460)
chr2 (14-92)||(43303321-43303399)
chr2 (12-112)||(3811718-3811818)
chr2 (16-92)||(29653626-29653702)
chr2 (12-131)||(10026643-10026762)
chr2 (12-131)||(10046504-10046622)
chr2 (38-117)||(34346340-34346419)
chr2 (30-112)||(10669571-10669653)
chr2 (11-69)||(27725962-27726020)
chr2 (14-112)||(28616408-28616506)
chr2 (22-131)||(13026448-13026557)
[»] scaffold0170 (1 HSPs)
scaffold0170 (12-131)||(9808-9927)
[»] chr5 (45 HSPs)
chr5 (8-131)||(19572685-19572808)
chr5 (12-131)||(30349540-30349659)
chr5 (8-131)||(1538392-1538515)
chr5 (8-131)||(42861241-42861364)
chr5 (22-131)||(25417220-25417329)
chr5 (12-128)||(38897746-38897861)
chr5 (8-131)||(14152011-14152134)
chr5 (8-131)||(20525799-20525922)
chr5 (43-129)||(1898964-1899050)
chr5 (12-114)||(20682644-20682746)
chr5 (38-131)||(5731973-5732066)
chr5 (12-108)||(12081892-12081988)
chr5 (27-131)||(28857089-28857193)
chr5 (12-131)||(7866542-7866661)
chr5 (28-131)||(26077102-26077205)
chr5 (12-127)||(42086292-42086407)
chr5 (12-117)||(5079306-5079411)
chr5 (12-128)||(11845828-11845944)
chr5 (28-132)||(15034036-15034139)
chr5 (8-131)||(4016278-4016401)
chr5 (12-131)||(9812833-9812952)
chr5 (12-98)||(42291532-42291618)
chr5 (12-133)||(7308391-7308512)
chr5 (12-93)||(9805003-9805084)
chr5 (12-85)||(24463913-24463986)
chr5 (28-128)||(8513483-8513583)
chr5 (8-80)||(32874799-32874871)
chr5 (12-131)||(12704975-12705094)
chr5 (17-128)||(30995085-30995196)
chr5 (12-131)||(37263202-37263320)
chr5 (12-131)||(39728348-39728467)
chr5 (12-98)||(18262645-18262731)
chr5 (34-112)||(20692913-20692991)
chr5 (38-131)||(2485158-2485250)
chr5 (38-131)||(18136333-18136426)
chr5 (22-102)||(40117405-40117485)
chr5 (28-127)||(13664225-13664324)
chr5 (12-131)||(41163487-41163605)
chr5 (12-117)||(3653941-3654044)
chr5 (77-131)||(6767143-6767197)
chr5 (22-108)||(7336604-7336690)
chr5 (12-94)||(23383655-23383737)
chr5 (77-127)||(35813090-35813140)
chr5 (12-109)||(14588644-14588741)
chr5 (38-131)||(35561871-35561964)
[»] chr3 (49 HSPs)
chr3 (16-131)||(10855344-10855459)
chr3 (12-131)||(13893886-13894005)
chr3 (8-131)||(25294920-25295043)
chr3 (12-117)||(47219118-47219223)
chr3 (12-112)||(47749133-47749232)
chr3 (12-131)||(30767275-30767394)
chr3 (22-131)||(26207839-26207948)
chr3 (11-131)||(42412801-42412921)
chr3 (12-131)||(15320146-15320265)
chr3 (8-131)||(29135873-29135996)
chr3 (8-131)||(45877414-45877537)
chr3 (11-117)||(15795521-15795626)
chr3 (8-112)||(49198330-49198434)
chr3 (12-128)||(49543482-49543598)
chr3 (11-131)||(51682981-51683101)
chr3 (12-95)||(3507561-3507644)
chr3 (12-131)||(29127879-29127998)
chr3 (8-131)||(29762179-29762302)
chr3 (22-131)||(45402389-45402495)
chr3 (22-128)||(6462375-6462481)
chr3 (38-131)||(11687163-11687256)
chr3 (38-131)||(48341980-48342073)
chr3 (22-131)||(54261186-54261295)
chr3 (12-96)||(8164548-8164632)
chr3 (27-131)||(10040517-10040620)
chr3 (29-117)||(52364845-52364933)
chr3 (13-131)||(35315916-35316034)
chr3 (12-133)||(7650185-7650306)
chr3 (12-117)||(47471806-47471910)
chr3 (12-109)||(55069707-55069804)
chr3 (12-112)||(7328823-7328922)
chr3 (45-129)||(7612987-7613071)
chr3 (12-131)||(28572239-28572358)
chr3 (12-131)||(41630540-41630659)
chr3 (8-131)||(51060305-51060428)
chr3 (13-131)||(39849032-39849149)
chr3 (38-131)||(45450501-45450591)
chr3 (38-102)||(13167497-13167561)
chr3 (31-131)||(31072838-31072938)
chr3 (13-117)||(33251636-33251740)
chr3 (12-127)||(3136722-3136836)
chr3 (78-129)||(33560822-33560873)
chr3 (22-117)||(35923661-35923756)
chr3 (44-131)||(37092565-37092652)
chr3 (8-67)||(50405627-50405686)
chr3 (12-94)||(26361995-26362077)
chr3 (30-96)||(30045816-30045882)
chr3 (17-94)||(7310736-7310813)
chr3 (38-131)||(49082784-49082877)
[»] chr1 (42 HSPs)
chr1 (12-131)||(43959849-43959968)
chr1 (22-131)||(48798108-48798217)
chr1 (8-129)||(18915830-18915951)
chr1 (12-131)||(10172999-10173118)
chr1 (8-131)||(41663880-41664003)
chr1 (8-131)||(49078075-49078198)
chr1 (11-117)||(33004042-33004148)
chr1 (42-128)||(34334353-34334439)
chr1 (38-131)||(5855483-5855576)
chr1 (12-133)||(10336475-10336596)
chr1 (12-112)||(37339799-37339900)
chr1 (12-127)||(8763956-8764071)
chr1 (8-131)||(26325773-26325896)
chr1 (12-131)||(33418143-33418262)
chr1 (17-128)||(40288510-40288621)
chr1 (13-131)||(30927756-30927874)
chr1 (11-109)||(50503388-50503486)
chr1 (12-129)||(10422751-10422868)
chr1 (12-116)||(14254296-14254400)
chr1 (12-131)||(9659207-9659325)
chr1 (12-131)||(11397917-11398035)
chr1 (30-128)||(2980977-2981075)
chr1 (8-70)||(21849229-21849291)
chr1 (12-117)||(18649380-18649485)
chr1 (12-117)||(32142874-32142978)
chr1 (12-128)||(31152680-31152796)
chr1 (28-112)||(47312943-47313026)
chr1 (28-131)||(6563402-6563505)
chr1 (28-127)||(12036788-12036887)
chr1 (30-117)||(15465940-15466027)
chr1 (38-109)||(16263528-16263599)
chr1 (12-131)||(17642032-17642151)
chr1 (33-112)||(45536688-45536767)
chr1 (8-112)||(13262063-13262167)
chr1 (30-126)||(34719742-34719838)
chr1 (17-112)||(12744556-12744651)
chr1 (17-112)||(12755546-12755641)
chr1 (12-131)||(32150950-32151069)
chr1 (42-129)||(45361940-45362027)
chr1 (13-127)||(34697300-34697414)
chr1 (22-131)||(32832-32941)
chr1 (28-129)||(34877953-34878054)
[»] scaffold0006 (1 HSPs)
scaffold0006 (12-128)||(68483-68596)
[»] scaffold0549 (2 HSPs)
scaffold0549 (380-436)||(2392-2448)
scaffold0549 (380-436)||(4482-4538)
[»] scaffold0079 (1 HSPs)
scaffold0079 (38-117)||(8152-8230)
[»] scaffold0004 (2 HSPs)
scaffold0004 (12-111)||(7862-7961)
scaffold0004 (9-131)||(95005-95125)
[»] scaffold0010 (1 HSPs)
scaffold0010 (12-70)||(155738-155796)
[»] scaffold0376 (1 HSPs)
scaffold0376 (12-128)||(12636-12752)
[»] scaffold0086 (1 HSPs)
scaffold0086 (8-96)||(26181-26269)
[»] scaffold0291 (1 HSPs)
scaffold0291 (12-98)||(6851-6937)
[»] scaffold0384 (1 HSPs)
scaffold0384 (8-133)||(5934-6058)
[»] scaffold0050 (1 HSPs)
scaffold0050 (40-117)||(72610-72686)
[»] scaffold0005 (1 HSPs)
scaffold0005 (14-127)||(271103-271216)
[»] scaffold0316 (1 HSPs)
scaffold0316 (12-96)||(1641-1725)
[»] scaffold0341 (1 HSPs)
scaffold0341 (28-131)||(18595-18698)
[»] scaffold0029 (1 HSPs)
scaffold0029 (14-131)||(41007-41124)
[»] scaffold0016 (1 HSPs)
scaffold0016 (12-94)||(8728-8810)


Alignment Details
Target: chr6 (Bit Score: 634; Significance: 0; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 634; E-Value: 0
Query Start/End: Original strand, 8 - 753
Target Start/End: Complemental strand, 12635901 - 12635157
Alignment:
Q  8 caatggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatcct 107  Q
    |||| |||||||| |||| ||||| |||| ||||||||||||||| |||||||||||||| ||  ||| ||||||||| |||||||||||||||| ||||    
T  12635901 caatagtgggcgactaatccggcttgtgcgtagaggcatgcgcactagccaagcgttgtttcccctgggaatcaaacctggtattccccggatacgtcct 12635802  T
Q  108 tggaatgagcatcttgccactggaacgctccaacaaattttccagcaattgataaatgattcaatccactgttgagagcctcctttctccactagacatc 207  Q
    ||||| |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12635801 tggaaggagcatcttgccaccggtacgctccaacaaattttccagcaattgataaatgattcaatccactgttgagagcctcctttctccactagacatc 12635702  T
Q  208 cattgtccataaatcttaagcttggggattggtaccattagcttgtggatttctctcttgatagcttggttgatgagctaagggatacaatagaagtttt 307  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  12635701 tattgtccataaatcttaagcttggggattggtaccattagcttgtggatttctctcttgatagcttggttgatgagctaagggataccatagaagtttt 12635602  T
Q  308 aaggaggtacaggattcaatcattgaaagataacataatttagatactataagttggtagaagaagtaaatcaatcacgtaccttaagagtttctaattc 407  Q
    ||| |||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  12635601 aagcaggtacaggattcaatcattgaaagataacataatttagagattataagttggtagaagaagttaatcaatcacgtaccttaagagtttctaattc 12635502  T
Q  408 tgggccttcaaatgcatcaaaatacctatggacaagtgaattcatatcaatgctgcttgcaatattggtaccatcttccgcgttttcgactggttgtata 507  Q
    |||||||||||||| ||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  12635501 tgggccttcaaatgtatcaaaatacctatgaacaagtaaattcatatcaatgctgcttgcaatattggtaccatcttccgcg-tttcgactggttgtata 12635403  T
Q  508 ccgcttagaatcgacaattgtttcttgagtcaaccagaccatgttttaaacgagtcgtatctcttatcttgaaatttttcttgatcagaatttcctgatg 607  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  12635402 ccgcttagaatcgacaattgtttcttgagtcaaccagaccatgttttaaacgagtcgtatcttttatcttgaaatttttcttgatcagaatttcctgatg 12635303  T
Q  608 gatgaacactatctttgataataacagtttctttgatgattgatgactaatgcttcatcttgttgccttgtaggtgatgatgcttcaatttcccattgaa 707  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  12635302 gatgaacactatctttgataataacagtttctttgatgattgatgactaatgcttcatcttgttgccttgtaggtgatgatgcttcaatttcctattgaa 12635203  T
Q  708 aaagtatgaaaaagttggattttagttttatcacgaggccatgttc 753  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  12635202 aaagtatgaaaaagttggattttagttttatcacgaggccatgttc 12635157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 8932744 - 8932625
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    |||||| || |||| |||||| ||| ||||||||||||||| ||||||| |||||||||  ||| |||| |||||| |||||||||||||||||||||||    
T  8932744 ggtgggtgattaatccggctcatgcgtagaggcatgcgcactagccaagtgttgttccccctgggaatcgaacccgatattccccggatacatccttgga 8932645  T
Q  112 atgagcatcttgccactgga 131  Q
    | || |  ||||||||||||    
T  8932644 aggaactccttgccactgga 8932625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 8944210 - 8944091
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    |||||| || |||| |||||| ||| ||||||||||||||| ||||||| |||||||||  ||| |||| |||||| |||||||||||||||||||||||    
T  8944210 ggtgggtgattaatccggctcatgcgtagaggcatgcgcactagccaagtgttgttccccctgggaatcgaacccgatattccccggatacatccttgga 8944111  T
Q  112 atgagcatcttgccactgga 131  Q
    | || |  ||||||||||||    
T  8944110 aggaactccttgccactgga 8944091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 12 - 130
Target Start/End: Original strand, 30788880 - 30788996
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||||||| |||| |||||||||| |||||||||||||||  ||||| ||||||||| |  |  ||||||||||| |||||||||||||||||||||||    
T  30788880 ggtgggcgactaatccggctcgtgcctagaggcatgcgcactggccaaacgttgttccatgag--aatcaaacccgatattccccggatacatccttgga 30788977  T
Q  112 atgagcatcttgccactgg 130  Q
    | ||||  |||||||||||    
T  30788978 aggagctccttgccactgg 30788996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 22 - 131
Target Start/End: Complemental strand, 21898721 - 21898612
Alignment:
Q  22 taattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatct 121  Q
    |||| |||||| ||| |||||||||||||||  |||||||||||||||   ||| |||| ||||||||||||||||||||| ||||||||| ||||  ||    
T  21898721 taatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcgaacccggtattccccggatacgtccttggaaggagctcct 21898622  T
Q  122 tgccactgga 131  Q
    ||||||||||    
T  21898621 tgccactgga 21898612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 5253250 - 5253369
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||||||| |||| |||||| ||| |||||||||||||||  |||||| |||||||||  ||| |||| ||||||||||||||||| ||| ||||||||    
T  5253250 ggtgggcgattaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccgggtacgtccttgga 5253349  T
Q  112 atgagcatcttgccactgga 131  Q
    | ||||  ||||||| ||||    
T  5253350 aggagctccttgccattgga 5253369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 12 - 117
Target Start/End: Complemental strand, 12606513 - 12606408
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||||||| |||| |||||||||| |||||||||||||||  ||||| ||||||||||  |||||||| || | |||||||||||||||| | ||||||    
T  12606513 ggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaatctggtattccccggatacgttcttgga 12606414  T
Q  112 atgagc 117  Q
    | ||||    
T  12606413 aggagc 12606408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 635 - 734
Target Start/End: Complemental strand, 11363808 - 11363708
Alignment:
Q  635 tttctttgatgattgatgactaatgcttcatcttgttgccttgtaggtgatgatgcttcaatttcccattgaaaaagtatg-aaaaagttggattttagt 733  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||||||||| | | ||| ||||| |||||| ||  ||| |||||||| |||||||||    
T  11363808 tttctttgatgattgatgactaatggttcatcttgttggcttgtaggtgatgcttcctcagtttcctattgaacaaacatgaaaaaagttagattttagt 11363709  T
Q  734 t 734  Q
    |    
T  11363708 t 11363708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 390 - 576
Target Start/End: Complemental strand, 11364262 - 11364076
Alignment:
Q  390 cttaagagtttctaattctgggccttcaaatgcatcaaaatacctatggacaagtgaattcatatcaatgctgcttgcaatattggtaccatcttccgcg 489  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||  ||| || ||  | |||||| ||| |||| | | ||| |||||||||  |      
T  11364262 cttaagagtttctaattctggaccttccaatgcatcaaaatacctatcaacaggtaaaggcctatcaaagcttcttggagtgttgttaccatcttgtgta 11364163  T
Q  490 ttttcgactggttgtataccgcttagaatcgacaattgtttcttgagtcaaccagaccatgttttaaacgagtcgtatctcttatct 576  Q
    ||| | |  |||| | | || | ||||||||| |||||| ||| ||||| ||||||||| ||||||||||||||| || ||||||||    
T  11364162 tttcctatcggttcttttccacgtagaatcgataattgtctctcgagtccaccagaccaagttttaaacgagtcgaatgtcttatct 11364076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 8 - 129
Target Start/End: Original strand, 6606120 - 6606241
Alignment:
Q  8 caatggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatcct 107  Q
    ||||||||| ||| |||| |||||| ||| ||||||||||  |||  |||||| |||||||||  ||  |||| ||||||||||||||||||||| ||||    
T  6606120 caatggtggacgactaatccggctcatgcgtagaggcatgtacactggccaagtgttgttccccctgagaatcgaacccggtattccccggatacgtcct 6606219  T
Q  108 tggaatgagcatcttgccactg 129  Q
    ||||| ||||  ||||||||||    
T  6606220 tggaaggagctccttgccactg 6606241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 22 - 131
Target Start/End: Complemental strand, 19089571 - 19089462
Alignment:
Q  22 taattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatct 121  Q
    |||| |||||||||| ||||||||||| |||  |||||| |||||||||  ||| ||||||||| |||||||| ||||||| |||||| |||||||  ||    
T  19089571 taatccggctcgtgcgtagaggcatgctcactggccaagtgttgttccccctgggaatcaaacctggtattcctcggatacgtccttgaaatgagctcct 19089472  T
Q  122 tgccactgga 131  Q
    ||| ||||||    
T  19089471 tgcgactgga 19089462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 380 - 436
Target Start/End: Complemental strand, 11341349 - 11341293
Alignment:
Q  380 aatcacgtaccttaagagtttctaattctgggccttcaaatgcatcaaaatacctat 436  Q
    |||||| |||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  11341349 aatcacttaccttaagagtttctaattctggaccttccaatgcatcaaaatacctat 11341293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 131
Target Start/End: Original strand, 13036047 - 13036150
Alignment:
Q  28 ggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatcttgccac 127  Q
    ||||| ||| |||||||||||||||  |||||| |||||||||  || ||||| |||||| ||||||||| |||| ||||||||| ||||  ||||||||    
T  13036047 ggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgaaaatcgaacccgatattccccgaatacgtccttggaaggagctccttgccac 13036146  T
Q  128 tgga 131  Q
    ||||    
T  13036147 tgga 13036150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 22 - 128
Target Start/End: Original strand, 29444802 - 29444908
Alignment:
Q  22 taattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatct 121  Q
    |||| |||||| ||| |||||||||||||||  ||||||||||||||||  | |||||| |||||||||| |||||| ||| || |||||| ||||  ||    
T  29444802 taatccggctcatgcgtagaggcatgcgcactggccaagcgttgttccccctagaaatcgaacccggtatcccccgggtacgtctttggaaggagctcct 29444901  T
Q  122 tgccact 128  Q
    |||||||    
T  29444902 tgccact 29444908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 10311514 - 10311615
Alignment:
Q  30 ctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatcttgccactg 129  Q
    ||||||| ||||| |||||||||  |||||||||||||||| |||   ||| ||||||||||||||||||||| | ||||||| ||||  ||||| ||||    
T  10311514 ctcgtgcgtagagacatgcgcactggccaagcgttgttccccttgaggatcgaacccggtattccccggatacgttcttggaaggagctccttgctactg 10311613  T
Q  130 ga 131  Q
    ||    
T  10311614 ga 10311615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 14107387 - 14107504
Alignment:
Q  14 tgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaat 113  Q
    ||||||| |||| |||||| ||| |||||||||| ||||  | |||||||||||||   ||| |||| |||||||||||||||| |||| || ||||||     
T  14107387 tgggcgactaatccggctcatgcgtagaggcatgtgcactggtcaagcgttgttcctcctgggaatcgaacccggtattccccgaatacgtctttggaag 14107486  T
Q  114 gagcatcttgccactgga 131  Q
    ||||  ||||||||||||    
T  14107487 gagctccttgccactgga 14107504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 29333178 - 29333270
Alignment:
Q  24 attcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagc 117  Q
    ||||||||| ||| |||||||||||||||  ||||| ||||||||||  |||||||| |||||||||||||| || ||| ||||||||| ||||    
T  29333178 attcggctcatgcgtagaggcatgcgcactggccaaacgttgttccc-ctggaaatcgaacccggtattccctgggtacgtccttggaaggagc 29333270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 2271330 - 2271447
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||| ||| |||| |||||||||| ||||| |||||||||  || ||||||||||| ||  |  |||| |||||||||||||||| |||| ||||||||    
T  2271330 ggtggacgactaatccggctcgtgcgtagagacatgcgcactggctaagcgttgttctctgag--aatcgaacccggtattccccgaatacgtccttgga 2271427  T
Q  112 atgagcatcttgccactgga 131  Q
    | ||||  ||||||||||||    
T  2271428 aggagctccttgccactgga 2271447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 127
Target Start/End: Complemental strand, 13469020 - 13468901
Alignment:
Q  8 caatggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatcct 107  Q
    ||||||||||||| ||||  ||||||||| |||||||||| ||||   |||| ||||||||||  | | |||  |||| |||||||||||||||| ||||    
T  13469020 caatggtgggcgactaatctggctcgtgcgtagaggcatgtgcactgaccaatcgttgttccccctaggaattgaacctggtattccccggatacgtcct 13468921  T
Q  108 tggaatgagcatcttgccac 127  Q
    ||||| ||||  ||||||||    
T  13468920 tggaaggagctccttgccac 13468901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 9633652 - 9633708
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttc 68  Q
    ||||||||| |||| |||||||||| |||||||||||||||  ||||||||||||||    
T  9633652 ggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttc 9633708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 38 - 113
Target Start/End: Original strand, 3587998 - 3588073
Alignment:
Q  38 tagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaat 113  Q
    |||||| ||| ||||  |||||||||||||||| |||| |||| |||||||||||| |||||||| || |||||||    
T  3587998 tagaggtatgtgcactggccaagcgttgttccccttgggaatcgaacccggtattctccggatacgtctttggaat 3588073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 8612001 - 8612120
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||||||| |||| ||| || ||| |||| |||||| |||  | |||||||||||||   | | |||| ||||||||||||||||| ||| ||||||||    
T  8612001 ggtgggcgactaatccggttcatgcgtagaagcatgcacactggtcaagcgttgttcctcctcggaatcgaacccggtattccccgggtacgtccttgga 8612100  T
Q  112 atgagcatcttgccactgga 131  Q
    | ||||  ||||||||||||    
T  8612101 aggagctccttgccactgga 8612120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 57 - 131
Target Start/End: Original strand, 9179808 - 9179882
Alignment:
Q  57 caagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatcttgccactgga 131  Q
    |||| |||||||||  ||| |||| |||||||||||||| || ||| ||||||||||||||  ||||||||||||    
T  9179808 caagtgttgttccccctgggaatcgaacccggtattccctgggtacgtccttggaatgagctccttgccactgga 9179882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 131
Target Start/End: Original strand, 9366460 - 9366569
Alignment:
Q  22 taattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatct 121  Q
    |||| |||||||||| |||||||||||||||  |||||||||| |||||  |  ||||| |||| | ||||||||   ||||||||||||| ||||  ||    
T  9366460 taatccggctcgtgcgtagaggcatgcgcactggccaagcgttattccccctaaaaatcgaacctgatattccccaagtacatccttggaaggagctcct 9366559  T
Q  122 tgccactgga 131  Q
    || |||||||    
T  9366560 tgtcactgga 9366569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 131
Target Start/End: Original strand, 24671903 - 24672012
Alignment:
Q  22 taattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatct 121  Q
    |||| ||||| |||| ||||||||||| |||  | |||| |||||||||| ||| |||  |||||||||||| || ||||| |||||| || ||||  ||    
T  24671903 taatccggcttgtgcgtagaggcatgcacactggtcaagtgttgttccctctgggaatagaacccggtattctccagatacgtccttgaaaggagctcct 24672002  T
Q  122 tgccactgga 131  Q
    ||||||||||    
T  24672003 tgccactgga 24672012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 12 - 102
Target Start/End: Complemental strand, 3601167 - 3601077
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatac 102  Q
    ||||| ||| |||| |||||||||  || ||||||||||||  ||||||||||||||||  ||  |||| || ||||||||||||| ||||    
T  3601167 ggtggacgactaatccggctcgtgtgtataggcatgcgcactggccaagcgttgttccccctgagaatcgaaaccggtattccccgaatac 3601077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 131
Target Start/End: Original strand, 19230596 - 19230703
Alignment:
Q  22 taattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatct 121  Q
    |||| |||||||||| |||||||||||  ||   ||||||||||||||| ||| ||||| || |||||||| ||||  ||| ||||||||| ||||  ||    
T  19230596 taatccggctcgtgcgtagaggcatgcatactgaccaagcgttgttccc-ttgaaaatcgaatccggtatt-cccgagtacgtccttggaaggagctcct 19230693  T
Q  122 tgccactgga 131  Q
    ||||||||||    
T  19230694 tgccactgga 19230703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 131
Target Start/End: Original strand, 21016800 - 21016897
Alignment:
Q  34 tgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatcttgccactgga 131  Q
    ||||||||||||||| |||   | ||| ||||||| | || | |||| ||||||||||||||||| ||| ||| ||||| ||||  ||||||||||||    
T  21016800 tgcatagaggcatgcacactgactaagtgttgttctccttaggaatcgaacccggtattccccgggtacgtccctggaaggagctccttgccactgga 21016897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 64; Significance: 1e-27; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 8 - 131
Target Start/End: Complemental strand, 34659312 - 34659189
Alignment:
Q  8 caatggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatcct 107  Q
    ||||||||||||| |||| |||||||||| |||||||||||||||  | |||||||||||||| |||  |||| ||||||||||||||||| |||||||     
T  34659312 caatggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggtcaagcgttgttccccttgagaatcgaacccggtattccccgggtacatccc 34659213  T
Q  108 tggaatgagcatcttgccactgga 131  Q
    ||||| ||||  ||||||||||||    
T  34659212 tggaaggagctccttgccactgga 34659189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 8 - 131
Target Start/End: Complemental strand, 48804769 - 48804646
Alignment:
Q  8 caatggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatcct 107  Q
    ||||||||| ||| |||| |||||| ||| |||||||||||||||  |||||| ||||||||| |||| |||| ||||||||||||||||||||| ||||    
T  48804769 caatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccttgggaatcgaacccggtattccccggatacgtcct 48804670  T
Q  108 tggaatgagcatcttgccactgga 131  Q
    ||||| ||||  ||||||||||||    
T  48804669 tggaaggagctccttgccactgga 48804646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 8 - 131
Target Start/End: Original strand, 10047899 - 10048022
Alignment:
Q  8 caatggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatcct 107  Q
    ||||||||| ||| |||||| |||| ||| ||||||| |||||||  |||||| |||||||||  ||| |||| ||||||||||||||||||||| ||||    
T  10047899 caatggtggacgactaattctgctcatgcgtagaggcctgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccggatacgtcct 10047998  T
Q  108 tggaatgagcatcttgccactgga 131  Q
    ||||| ||||  ||||||||||||    
T  10047999 tggaaggagctccttgccactgga 10048022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 47341941 - 47341839
Alignment:
Q  29 gctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatcttgccact 128  Q
    |||||||| |||||||||||||||  |||||| |||||||||  ||| |||| ||| ||||||||||||| ||| ||||||||||||||  |||||||||    
T  47341941 gctcgtgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaactcggtattccccgggtacgtccttggaatgagctccttgccact 47341842  T
Q  129 gga 131  Q
    |||    
T  47341841 gga 47341839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 7 - 112
Target Start/End: Original strand, 17748404 - 17748509
Alignment:
Q  7 acaatggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatcc 106  Q
    |||| ||||| ||| |||| |||||||| | |||||||||||||||  ||||||||||||||||  ||| |||| |||||||||||||||| |||| |||    
T  17748404 acaaaggtggacgactaatccggctcgtacgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaacccggtattccccgaatacgtcc 17748503  T
Q  107 ttggaa 112  Q
    ||||||    
T  17748504 ttggaa 17748509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 1797527 - 1797423
Alignment:
Q  27 cggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatcttgcca 126  Q
    |||||||||| ||||| |||||||||  ||||||||||||| ||  ||| |||| ||||||||||||| ||||||| ||||||||| ||||  |||||||    
T  1797527 cggctcgtgcgtagagacatgcgcactggccaagcgttgtttcccctgggaatcgaacccggtattcctcggatacgtccttggaaggagctccttgcca 1797428  T
Q  127 ctgga 131  Q
    |||||    
T  1797427 ctgga 1797423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 12 - 112
Target Start/End: Original strand, 38578894 - 38578994
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||||||| |||| |||||| ||| |||||||||||||||  ||||||||||||||||  ||| |||| |||||| |||||||||| ||| ||||||||    
T  38578894 ggtgggcgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaacccgatattccccgggtacgtccttgga 38578993  T
Q  112 a 112  Q
    |    
T  38578994 a 38578994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 8 - 131
Target Start/End: Original strand, 4195225 - 4195348
Alignment:
Q  8 caatggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatcct 107  Q
    ||||||||| ||  |||| |||||| ||| ||||||||||||||| ||||||  ||||||||   |||||||| ||| ||||||||||||||||| ||||    
T  4195225 caatggtggacggctaatccggctcatgcgtagaggcatgcgcactagccaaatgttgttcctcctggaaatcgaactcggtattccccggatacgtcct 4195324  T
Q  108 tggaatgagcatcttgccactgga 131  Q
    ||| | ||||  ||||||||||||    
T  4195325 tggcaggagctccttgccactgga 4195348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 21530830 - 21530711
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    |||| |||| ||||||||||||||| |||||||||| ||||   ||||| |||||||||  ||| |||||||||| ||||||||| | ||| ||||||||    
T  21530830 ggtgagcgattaattcggctcgtgcgtagaggcatgtgcactgaccaagtgttgttccccctgggaatcaaacccagtattccccaggtacgtccttgga 21530731  T
Q  112 atgagcatcttgccactgga 131  Q
    | ||||  ||||||||||||    
T  21530730 aggagctccttgccactgga 21530711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 38 - 131
Target Start/End: Complemental strand, 18785725 - 18785632
Alignment:
Q  38 tagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatcttgccactgga 131  Q
    |||||||||||||||  |||||| |||||||||  | | |||| ||||||||||||||||| ||| ||||||||| |||| |||||||||||||    
T  18785725 tagaggcatgcgcactggccaagtgttgttccccctaggaatcgaacccggtattccccgggtacgtccttggaaggagcttcttgccactgga 18785632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 5069842 - 5069961
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||||||| |||| ||||| |||| ||||||||||| ||| ||| ||||||||||||   |||||||| ||||||||||| ||||| ||| ||||| ||    
T  5069842 ggtgggcgactaatccggcttgtgcgtagaggcatgcacactagctaagcgttgttcctcctggaaatcgaacccggtatttcccgggtacgtccttaga 5069941  T
Q  112 atgagcatcttgccactgga 131  Q
    |  |||  ||||||||||||    
T  5069942 agaagctccttgccactgga 5069961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 42210289 - 42210408
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    |||||| || |||| |||||||||| |||||||||||||||  ||||| |||||||  |  ||| |||| || |||||||||| ||||||| ||||||||    
T  42210289 ggtgggtgattaatccggctcgtgcgtagaggcatgcgcactggccaaacgttgttttcactgggaatcgaagccggtattcctcggatacgtccttgga 42210388  T
Q  112 atgagcatcttgccactgga 131  Q
    | ||||  ||||||||||||    
T  42210389 aagagctccttgccactgga 42210408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 17 - 131
Target Start/End: Original strand, 43346811 - 43346925
Alignment:
Q  17 gcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgag 116  Q
    |||| |||| |||||||| | |||||||||||||||  |||||| ||||||||| |||  |||  ||||||||||||||| ||||| || |||||| |||    
T  43346811 gcgactaatccggctcgtacgtagaggcatgcgcaccggccaagtgttgttccccttgagaattgaacccggtattccccagatacgtctttggaaggag 43346910  T
Q  117 catcttgccactgga 131  Q
    |  ||||||||||||    
T  43346911 ctccttgccactgga 43346925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 43925577 - 43925475
Alignment:
Q  29 gctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatcttgccact 128  Q
    |||| ||| |||||||||||||||   ||||| |||||||||  ||| |||| ||||||||||||||||| ||| ||||||||| ||||  |||||||||    
T  43925577 gctcatgcgtagaggcatgcgcactgaccaagtgttgttccccctgggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccact 43925478  T
Q  129 gga 131  Q
    |||    
T  43925477 gga 43925475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 117
Target Start/End: Complemental strand, 1606023 - 1605918
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||||||| |||| ||||||  || |||||||||| ||||  ||||||||||||||||  |||||||| |||| ||||||| |||| ||| ||||||||    
T  1606023 ggtgggcgactaatccggctcaagcctagaggcatgtgcactggccaagcgttgttccccctggaaatcgaaccaggtattctccgggtacgtccttgga 1605924  T
Q  112 atgagc 117  Q
    | ||||    
T  1605923 aggagc 1605918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 131
Target Start/End: Original strand, 4228777 - 4228897
Alignment:
Q  8 caatggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatcct 107  Q
    ||||||||||||| |||| |||||| ||| ||| |||||| ||||  ||||| |||||||||   |||||||| |||| |||||||| ||||||| ||||    
T  4228777 caatggtgggcgactaatccggctcatgcgtaggggcatgtgcactggccaaacgttgttcc---tggaaatcgaacctggtattcctcggatacgtcct 4228873  T
Q  108 tggaatgagcatcttgccactgga 131  Q
    ||||| ||||  |||||| |||||    
T  4228874 tggaaggagctccttgccgctgga 4228897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 13095940 - 13095825
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    |||| |||| |||| |||||| ||| |||||||||||||||  |||||| |||||||||  ||| |||  ||||||||||||||||| ||| |||||| |    
T  13095940 ggtgagcgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatagaacccggtattccccgggtacgtccttgaa 13095841  T
Q  112 atgagcatcttgccac 127  Q
    | ||||  ||||||||    
T  13095840 aggagctccttgccac 13095825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 30 - 117
Target Start/End: Original strand, 21190825 - 21190912
Alignment:
Q  30 ctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagc 117  Q
    ||||||| ||||||||||||||| |||||||||||| |||   | | |||| ||||||||||||||||||||  ||||||||| ||||    
T  21190825 ctcgtgcgtagaggcatgcgcactagccaagcgttgctcctcctaggaatcgaacccggtattccccggataagtccttggaaggagc 21190912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 22993394 - 22993513
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    |||| |||| |||| ||| |||||| ||||||||||| |||  |||||||||||||||   | | |||| |||||| |||||||||| ||| ||||||||    
T  22993394 ggtgagcgactaatccggttcgtgcgtagaggcatgcacactggccaagcgttgttcctcctcggaatcgaacccgatattccccgggtacgtccttgga 22993493  T
Q  112 atgagcatcttgccactgga 131  Q
    | ||||  ||||||||||||    
T  22993494 aggagctccttgccactgga 22993513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 117
Target Start/End: Original strand, 43862009 - 43862104
Alignment:
Q  22 taattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagc 117  Q
    |||| |||||| ||| |||||||||||||||  ||||| ||||||||||  ||| |||| ||||||||||||||| ||||| || |||||| ||||    
T  43862009 taatccggctcatgcgtagaggcatgcgcactggccaaacgttgttccccctgggaatcgaacccggtattccccagatacgtctttggaaagagc 43862104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 39420909 - 39420804
Alignment:
Q  22 taattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatct 121  Q
    |||| |||||| ||| |||||||| ||||||  ||||||||||||||||||||| | || || |||||||||||||| ||| |||||| || ||||  ||    
T  39420909 taatccggctcatgcgtagaggcacgcgcactggccaagcgttgttccctttgggattcgaa-ccggtattccccgggtacctccttgaaaggagctcct 39420811  T
Q  122 tgccact 128  Q
    |||||||    
T  39420810 tgccact 39420804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 131
Target Start/End: Complemental strand, 42032168 - 42032059
Alignment:
Q  22 taattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatct 121  Q
    ||||||||||| ||| |||| | ||| ||||  ||||| ||||||||||  ||| |||| |||| |||||||||||| ||| ||||||||| |||| |||    
T  42032168 taattcggctcatgcgtagatgtatgtgcactggccaaacgttgttccccgtgggaatcgaaccaggtattccccgggtacgtccttggaaggagcttct 42032069  T
Q  122 tgccactgga 131  Q
    ||| ||||||    
T  42032068 tgctactgga 42032059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 112
Target Start/End: Complemental strand, 14535377 - 14535273
Alignment:
Q  8 caatggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatcct 107  Q
    ||||||||||||| |||| | |||||||| ||||||||||| |||  |||||| ||||||| |  || |||| ||||||||||||||| |  ||| ||||    
T  14535377 caatggtgggcgactaatccagctcgtgcgtagaggcatgcacactggccaagtgttgttctccctgaaaatgaaacccggtattcccggagtacgtcct 14535278  T
Q  108 tggaa 112  Q
    |||||    
T  14535277 tggaa 14535273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 19914730 - 19914848
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||||||| ||||  ||||| ||| ||||||||||||||   ||||||||||||| ||||||| |||| ||||| |||||||   | ||| ||||||||    
T  19914730 ggtgggcgattaatctggctcatgcgtagaggcatgcgcattggccaagcgttgtt-cctttgggaatcgaacccagtattccttaggtacgtccttgga 19914828  T
Q  112 atgagcatcttgccactgga 131  Q
    | ||||  ||||||||||||    
T  19914829 aggagctccttgccactgga 19914848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 28 - 131
Target Start/End: Original strand, 26423330 - 26423433
Alignment:
Q  28 ggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatcttgccac 127  Q
    ||||||||| |||||||| | ||||  ||||||||||||| ||  ||| |||| |||||||||||||  || ||| ||||||||| |||  |||||||||    
T  26423330 ggctcgtgcgtagaggcaggtgcactggccaagcgttgtttcccctgggaatcgaacccggtattccttgggtacgtccttggaaggagtttcttgccac 26423429  T
Q  128 tgga 131  Q
    ||||    
T  26423430 tgga 26423433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 38 - 133
Target Start/End: Complemental strand, 45448026 - 45447931
Alignment:
Q  38 tagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatcttgccactggaac 133  Q
    |||||| |||||||| ||||||||||||||| |  |||||||| |||| |||||| | ||| ||| ||||||||| ||||  ||||||||| ||||    
T  45448026 tagagggatgcgcactagccaagcgttgttctccctggaaatcgaacctggtatttctcgggtacgtccttggaaggagctccttgccactagaac 45447931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 45960030 - 45960148
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    |||| |||| |||| |||||  ||| |||||||||||||||   ||||| |||||| || |||| |||||||| ||||||||||| ||||| ||||||||    
T  45960030 ggtgagcgactaatccggcttatgcgtagaggcatgcgcactgaccaagtgttgttgcccttgggaatcaaactcggtattcccc-gatacgtccttgga 45960128  T
Q  112 atgagcatcttgccactgga 131  Q
    | ||||  ||||| ||||||    
T  45960129 aagagctccttgctactgga 45960148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 86
Target Start/End: Complemental strand, 41945555 - 41945482
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaaccc 86  Q
    ||||| ||| |||| |||||||||| |||||||||||||||  |||||||||| ||||| ||| |||||||||||    
T  41945555 ggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttattccc-ttgaaaatcaaaccc 41945482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 127
Target Start/End: Complemental strand, 27028335 - 27028246
Alignment:
Q  38 tagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatcttgccac 127  Q
    |||||||||||||||  |||||| |||||||||  |||||||| |||| |||||| ||| | ||| | ||||||||||||  ||||||||    
T  27028335 tagaggcatgcgcactggccaagtgttgttccccctggaaatcgaacctggtatttcccaggtacgttcttggaatgagctccttgccac 27028246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 36619277 - 36619378
Alignment:
Q  8 caatggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatcct 107  Q
    ||||||||| ||| |||| |||||| ||| ||||||||||| |||  | |||| |||||||||  ||| |||| |||||||||||||||  |||| ||||    
T  36619277 caatggtggacgactaatccggctcatgcgtagaggcatgcacactggacaagtgttgttccccctgggaatcgaacccggtattccccaaatacgtcct 36619376  T
Q  108 tg 109  Q
    ||    
T  36619377 tg 36619378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 117
Target Start/End: Complemental strand, 37515006 - 37514898
Alignment:
Q  9 aatggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatcctt 108  Q
    |||||||  ||| |||| |||||||||| ||||| |||||||||   |||| ||||||||||  || ||||| ||||| ||||||||||| ||  |||||    
T  37515006 aatggtgaacgattaatccggctcgtgcgtagagacatgcgcactgaccaaacgttgttcccactgaaaatcgaacccagtattccccgggtatgtcctt 37514907  T
Q  109 ggaatgagc 117  Q
    |||| ||||    
T  37514906 ggaaggagc 37514898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 12 - 96
Target Start/End: Original strand, 49142696 - 49142780
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattcccc 96  Q
    ||||||| | |||| |||||||||| |||||||||| ||||  || |||||||||||||  | | |||| |||||||||||||||    
T  49142696 ggtgggcaactaatccggctcgtgcgtagaggcatgtgcactggctaagcgttgttccccctaggaatcgaacccggtattcccc 49142780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 131
Target Start/End: Original strand, 22268088 - 22268175
Alignment:
Q  44 catgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatcttgccactgga 131  Q
    |||||||||  |||||  |||||||||  ||| |||| |||||||||||||||   ||| ||||||||||||||  ||||||||||||    
T  22268088 catgcgcactggccaaatgttgttccccctgggaatcgaacccggtattccccaagtacgtccttggaatgagctccttgccactgga 22268175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 22974033 - 22973944
Alignment:
Q  28 ggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagc 117  Q
    ||||| ||| |||| |||||| |||  ||||||||||||||||  ||  |||| ||||||||||||||||  ||| ||||||||| ||||    
T  22974033 ggctcatgcgtagacgcatgcacactggccaagcgttgttccccctgagaatcgaacccggtattccccgagtacgtccttggaaggagc 22973944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 131
Target Start/End: Complemental strand, 23658251 - 23658143
Alignment:
Q  22 taattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatct 121  Q
    |||| |||||||||  ||||||||||| |||  ||||||||||||||||  |||||||| |||  | ||||||| || ||| ||||| ||| ||||  ||    
T  23658251 taatccggctcgtgtgtagaggcatgcacactggccaagcgttgttccccctggaaatcgaactggatattccctgggtacgtcctt-gaaggagctcct 23658153  T
Q  122 tgccactgga 131  Q
    ||||||||||    
T  23658152 tgccactgga 23658143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 2e-26; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 8 - 133
Target Start/End: Complemental strand, 47078546 - 47078421
Alignment:
Q  8 caatggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatcct 107  Q
    |||||||| |||| |||| |||||||||| |||||||||| ||||  ||||||||||||||||  ||| |||| ||||||||||||||||| ||| ||||    
T  47078546 caatggtgagcgactaatccggctcgtgcgtagaggcatgtgcactggccaagcgttgttccccctgggaatcgaacccggtattccccgggtacgtcct 47078447  T
Q  108 tggaatgagcatcttgccactggaac 133  Q
    ||||| ||||  ||||||||||||||    
T  47078446 tggaaggagctccttgccactggaac 47078421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 5472875 - 5472994
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||||||| |||| |||||||||| |||||||||||||||  ||||||||||||| ||  ||  ||||||||| |||||||||||||||| |||||| |    
T  5472875 ggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgtttcccctgagaatcaaacctggtattccccggatacgtccttgaa 5472974  T
Q  112 atgagcatcttgccactgga 131  Q
    ||||||  ||||||||||||    
T  5472975 atgagctccttgccactgga 5472994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 8 - 131
Target Start/End: Complemental strand, 29895875 - 29895752
Alignment:
Q  8 caatggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatcct 107  Q
    ||||||||| ||| |||| |||||| ||| |||||||||||||||  |||||| |||||||||  ||| |||| ||||||||||||||||||||| ||||    
T  29895875 caatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccggatacgtcct 29895776  T
Q  108 tggaatgagcatcttgccactgga 131  Q
    ||||| ||||  ||||||||||||    
T  29895775 tggaaggagctccttgccactgga 29895752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 1446911 - 1446791
Alignment:
Q  11 tggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgg 110  Q
    |||||| ||| |||| |||||| ||| |||||||||||||||  |||||| |||||||||  ||| |||| ||||||||||||||||||||| |||||||    
T  1446911 tggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccggatacgtccttgg 1446812  T
Q  111 aatgagcatcttgccactgga 131  Q
    || ||||  ||||||||||||    
T  1446811 aaggagctccttgccactgga 1446791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 38166111 - 38165992
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||||||| |||| |||||||||| ||||| |||||||||  ||||||||||||||||  ||| |||| ||||| ||||||||||||||| ||||||||    
T  38166111 ggtgggcgactaatccggctcgtgcgtagagccatgcgcactggccaagcgttgttccccctgggaatccaacccagtattccccggatacgtccttgga 38166012  T
Q  112 atgagcatcttgccactgga 131  Q
    | ||||  ||||||| ||||    
T  38166011 aggagctccttgccagtgga 38165992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 8 - 112
Target Start/End: Original strand, 3159492 - 3159596
Alignment:
Q  8 caatggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatcct 107  Q
    |||||||| |||| ||||  ||||||||| |||||||||||||||  ||||||||||||||||  ||||| || |||||||||||| |||||||| ||||    
T  3159492 caatggtgagcgactaatctggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctggaagtcgaacccggtattctccggatacgtcct 3159591  T
Q  108 tggaa 112  Q
    |||||    
T  3159592 tggaa 3159596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 36262794 - 36262911
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||||||| |||| || ||||||| |||||||||| ||||  ||||||||||||||||  ||| |||| |||||||||||| |||| ||| ||||||||    
T  36262794 ggtgggcgactaatccgactcgtgcgtagaggcatgtgcactggccaagcgttgttccc--tgggaatcgaacccggtattctccgggtacgtccttgga 36262891  T
Q  112 atgagcatcttgccactgga 131  Q
    | |||| |||||||||||||    
T  36262892 aggagcttcttgccactgga 36262911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 41162909 - 41163028
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||||||| ||||||||||| |||||||| |||||  |||  |||||| |||||||||| |||||||| ||| ||||||| ||||||||| ||||||||    
T  41162909 ggtgggcgactaattcggctcatgcatagaagcatgtacactggccaagtgttgttccctctggaaatcgaactcggtatttcccggatacgtccttgga 41163008  T
Q  112 atgagcatcttgccactgga 131  Q
    | ||||  |||| |||||||    
T  41163009 aggagctccttgtcactgga 41163028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 8 - 128
Target Start/End: Original strand, 41339418 - 41339538
Alignment:
Q  8 caatggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatcct 107  Q
    ||||||||||||| |||| || ||||||| ||||||||| | |||  |||||||||||||||| |||| | || |||||||||||| |||| ||| ||||    
T  41339418 caatggtgggcgactaatccgtctcgtgcgtagaggcatacacactggccaagcgttgttccccttgggagtcgaacccggtattctccgggtacgtcct 41339517  T
Q  108 tggaatgagcatcttgccact 128  Q
    ||||| ||||  |||||||||    
T  41339518 tggaaggagctccttgccact 41339538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 12 - 112
Target Start/End: Original strand, 49260692 - 49260792
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||| ||| |||| |||||||||| |||||||||||||||  |||||||||||||||| |||| |||  ||  | ||||||||||||||||||||||||    
T  49260692 ggtggtcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccttgggaattgaattcagtattccccggatacatccttgga 49260791  T
Q  112 a 112  Q
    |    
T  49260792 a 49260792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 20532436 - 20532555
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||||||| | || |||||| ||| |||||||||||||||  |||||||||||||||   |||||||| ||| |||||||| |||| ||   |||||||    
T  20532436 ggtgggcgacttatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctggaaatcgaactcggtattctccgggtatggccttgga 20532535  T
Q  112 atgagcatcttgccactgga 131  Q
    ||||||| ||||||||||||    
T  20532536 atgagcaccttgccactgga 20532555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 38 - 117
Target Start/End: Original strand, 40272384 - 40272463
Alignment:
Q  38 tagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagc 117  Q
    |||||||||||||||  ||||||||||||||||  |||||||| |||||| ||||||||||||||||| |||||| ||||    
T  40272384 tagaggcatgcgcactggccaagcgttgttccccatggaaatcgaacccgatattccccggatacatcattggaaagagc 40272463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 12 - 128
Target Start/End: Original strand, 1940804 - 1940917
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||||||| |||| |||||||||| |||||||||||||||   |||||||||||||||  ||| |||| |||||| |||| ||||| ||| ||||||||    
T  1940804 ggtgggcgactaatccggctcgtgcgtagaggcatgcgcac---ccaagcgttgttccccctgggaatcgaacccgatatttcccgggtacgtccttgga 1940900  T
Q  112 atgagcatcttgccact 128  Q
    | ||||  |||||||||    
T  1940901 aggagctccttgccact 1940917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 22 - 131
Target Start/End: Complemental strand, 29588810 - 29588701
Alignment:
Q  22 taattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatct 121  Q
    |||| |||||||||| ||||||||||||||| |||||||| ||||| ||  ||| |||| ||||||||||| |||||  || || |||||||||||  ||    
T  29588810 taatccggctcgtgcgtagaggcatgcgcactagccaagctttgtttcccctgggaatcgaacccggtatttcccgggcacgtctttggaatgagctcct 29588711  T
Q  122 tgccactgga 131  Q
    ||||||||||    
T  29588710 tgccactgga 29588701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 12 - 112
Target Start/End: Original strand, 7246673 - 7246773
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||||||| |||| |||||| ||| |||||||||||||||  ||||||||||||||||  | | |||| ||||| ||||||||||| ||| ||||||||    
T  7246673 ggtgggcgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcccactaggaatcgaacccagtattccccgggtacgtccttgga 7246772  T
Q  112 a 112  Q
    |    
T  7246773 a 7246773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 131
Target Start/End: Complemental strand, 24166518 - 24166415
Alignment:
Q  28 ggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatcttgccac 127  Q
    ||||||||| |||||||||||||||  ||||| ||||||| || |||| |||| ||||| ||||||||||  ||| ||||||||| ||||  ||||||||    
T  24166518 ggctcgtgcgtagaggcatgcgcactggccaaacgttgtttcccttgggaatcgaacccagtattccccgagtacgtccttggaaggagctccttgccac 24166419  T
Q  128 tgga 131  Q
    ||||    
T  24166418 tgga 24166415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 43458697 - 43458578
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||| ||| |||| |||||||| | |||||||||||||||  |||||||||| ||||   ||| |||| || || |||||||||  |||| ||||||||    
T  43458697 ggtggacgactaatccggctcgtccgtagaggcatgcgcactggccaagcgttcttcctcctgggaatcgaatccagtattccccaaatacgtccttgga 43458598  T
Q  112 atgagcatcttgccactgga 131  Q
    |||||| |||||||||||||    
T  43458597 atgagcttcttgccactgga 43458578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 122
Target Start/End: Complemental strand, 3507354 - 3507245
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||| ||| |||| |||||||||  |||||||| |||||| ||||||||||||||||| |||| |||| |||||| ||||| |||||||||| |||| |    
T  3507354 ggtggacgactaatccggctcgtgtgtagaggcacgcgcactagccaagcgttgttccc-ttgggaatcgaacccgatattctccggatacattcttgaa 3507256  T
Q  112 atgagcatctt 122  Q
    | |||| ||||    
T  3507255 aggagcttctt 3507245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 131
Target Start/End: Complemental strand, 53599134 - 53599025
Alignment:
Q  22 taattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatct 121  Q
    |||| |||||| ||| |||||||||||||||  ||||| |||||||||   ||| |||| ||||||||||||||||| ||| ||||||||| ||||  ||    
T  53599134 taatccggctcatgcgtagaggcatgcgcactggccaaacgttgttcctcctgggaatcgaacccggtattccccgggtacgtccttggaaggagctcct 53599035  T
Q  122 tgccactgga 131  Q
    ||||| ||||    
T  53599034 tgccaatgga 53599025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 2559391 - 2559272
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||| ||| |||| ||||| |||| |||||||||||||||  |||||||||||||||   | |||||| || |||||||||||| | ||| ||||||||    
T  2559391 ggtggacgagtaatccggcttgtgcgtagaggcatgcgcactggccaagcgttgttcctcctagaaatcgaatccggtattccccaggtacgtccttgga 2559292  T
Q  112 atgagcatcttgccactgga 131  Q
    | ||||   |||||||||||    
T  2559291 aggagctcgttgccactgga 2559272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 6779295 - 6779176
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||| ||| |||| |||||| |||||||||||||||||||  |||| | |||||||||  ||| |||| |||||||||||| || | ||| ||||||||    
T  6779295 ggtggacgactaatccggctcatgcatagaggcatgcgcactggccaggtgttgttccccctgggaatcgaacccggtattctccaggtacgtccttgga 6779196  T
Q  112 atgagcatcttgccactgga 131  Q
    |  |||  ||||||||||||    
T  6779195 agaagctccttgccactgga 6779176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 127
Target Start/End: Original strand, 36145242 - 36145357
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||| ||| |||| |||||| ||  |||||||||||||||    ||||||||||| ||  ||| |||| ||||||||||||||||| ||| ||||||||    
T  36145242 ggtggacgactaatccggctcatgtgtagaggcatgcgcactgatcaagcgttgtttcccctgggaatcgaacccggtattccccgggtacgtccttgga 36145341  T
Q  112 atgagcatcttgccac 127  Q
    ||||||  ||||||||    
T  36145342 atgagctccttgccac 36145357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 55921118 - 55920999
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    |||| |||| |||| |||||| | | |||||||||||||||   ||||| |||||||||  ||| |||| ||||||||||||||||| | | ||||||||    
T  55921118 ggtgagcgattaatccggctcatacgtagaggcatgcgcactgaccaagtgttgttccccctgggaatcgaacccggtattccccgggtgcgtccttgga 55921019  T
Q  112 atgagcatcttgccactgga 131  Q
    | ||||  ||||||||||||    
T  55921018 aggagctccttgccactgga 55920999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 112
Target Start/End: Complemental strand, 38075507 - 38075417
Alignment:
Q  22 taattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaa 112  Q
    ||||||||||| ||| |||||||||||||||  ||||||||||||| ||  ||  |||| |||||||||||| ||| |||| |||||||||    
T  38075507 taattcggctcatgcgtagaggcatgcgcactggccaagcgttgtttcccctgagaatcgaacccggtattctccgaatacgtccttggaa 38075417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 112
Target Start/End: Original strand, 48015110 - 48015200
Alignment:
Q  22 taattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaa 112  Q
    |||| |||||||||| ||||||| |||||||  ||||||||||||||||  ||| |||| ||||||||||||| ||| ||| || ||||||    
T  48015110 taatccggctcgtgcgtagaggcttgcgcactggccaagcgttgttcccactgggaatcgaacccggtattcctcgggtacgtctttggaa 48015200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 97
Target Start/End: Complemental strand, 30317317 - 30317232
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccg 97  Q
    ||||||||| ||||||||||||||| ||||||||| || ||  ||||||||||||||||| ||  |||| |||| | |||||||||    
T  30317317 ggtgggcgactaattcggctcgtgcgtagaggcattcgtactggccaagcgttgttccctctgagaatcgaacctgatattccccg 30317232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 112
Target Start/End: Complemental strand, 43468432 - 43468331
Alignment:
Q  11 tggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgg 110  Q
    |||||||||| |||| |||||| ||| |||||  ||| ||||  ||||||||||||||||  ||| |||| ||||||||||||||||| ||| | |||||    
T  43468432 tggtgggcgactaatccggctcatgcgtagagaaatgtgcactggccaagcgttgttccccctgggaatcgaacccggtattccccgggtacgttcttgg 43468333  T
Q  111 aa 112  Q
    ||    
T  43468332 aa 43468331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 112
Target Start/End: Complemental strand, 20128397 - 20128293
Alignment:
Q  8 caatggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatcct 107  Q
    ||||||||| ||| ||||   |||||||| || ||||||||||||  ||||||| ||||||||  ||  |||| ||||| ||||||||||||||| ||||    
T  20128397 caatggtggacgactaatctagctcgtgcgtaaaggcatgcgcactggccaagcattgttccccctgagaatcgaacccagtattccccggatacgtcct 20128298  T
Q  108 tggaa 112  Q
    |||||    
T  20128297 tggaa 20128293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 20354725 - 20354641
Alignment:
Q  8 caatggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtatt 92  Q
    |||| |||| ||| |||| || ||| ||| ||||||||||||||| ||||||||||||||| |  |||||||||||| |||||||    
T  20354725 caatagtggacgactaatccgactcatgcgtagaggcatgcgcactagccaagcgttgttctccctggaaatcaaactcggtatt 20354641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 27248510 - 27248393
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||||||| ||||  ||||| ||| |||||||||||||    |||||||||||||||   ||| | || ||||||||||||||||||||| ||||||||    
T  27248510 ggtgggcgactaatctggctcctgcgtagaggcatgcgctg--gccaagcgttgttcctcctgggactcgaacccggtattccccggatacgtccttgga 27248413  T
Q  112 atgagcatcttgccactgga 131  Q
    | ||||   |||||||||||    
T  27248412 aggagctcgttgccactgga 27248393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 22 - 117
Target Start/End: Original strand, 42722614 - 42722709
Alignment:
Q  22 taattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagc 117  Q
    |||| |||||| ||| |||||||||||||||  |||||||||||||||   ||| |||  ||||||||||| ||||| ||| ||||||||| ||||    
T  42722614 taatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaattgaacccggtatttcccgggtacgtccttggaaggagc 42722709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 105
Target Start/End: Original strand, 42722405 - 42722498
Alignment:
Q  11 tggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatc 105  Q
    |||||| ||| |||| || ||| |||||||||| ||||||||  | |||| ||||||||| | |||| |||||||||||||||||||| ||||||    
T  42722405 tggtggacgactaatccgactcatgcatagaggtatgcgcactggtcaagtgttgttcccctgggaa-tcaaacccggtattccccgggtacatc 42722498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 128
Target Start/End: Complemental strand, 52950140 - 52950050
Alignment:
Q  38 tagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatcttgccact 128  Q
    ||||| |||||||||  ||||||||||||||||  ||| |||| |||||| |||||||| | ||| ||||||||| ||||  |||||||||    
T  52950140 tagagtcatgcgcactggccaagcgttgttccccctgggaatcgaacccgatattccccaggtacgtccttggaaggagctccttgccact 52950050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 117
Target Start/End: Complemental strand, 8889106 - 8889001
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||| ||| |||| |||||| ||| ||||| |||||||||   ||||| |||||||||  | | |||| ||||||||||||||||||||| ||||| ||    
T  8889106 ggtggacgactaatccggctcatgcgtagagccatgcgcactgcccaagtgttgttccccctaggaatcgaacccggtattccccggatacgtccttaga 8889007  T
Q  112 atgagc 117  Q
    | ||||    
T  8889006 aggagc 8889001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 128
Target Start/End: Complemental strand, 33647786 - 33647689
Alignment:
Q  31 tcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatcttgccact 128  Q
    |||||| |||||| ||| ||||  | |||||||||||| |  |||||||| ||||||||||||||| ||||| |||||| || ||||  |||||||||    
T  33647786 tcgtgcgtagaggaatgtgcactggtcaagcgttgttctccctggaaatcgaacccggtattccccagatacgtccttgaaaggagctccttgccact 33647689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 38168330 - 38168227
Alignment:
Q  22 taattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatct 121  Q
    |||| |||||| ||| |||||||||| ||||  |||||||||||||||  || | |||| |||| |||||||||||| ||| ||||||||| ||||  ||    
T  38168330 taatccggctcatgcgtagaggcatg-gcactggccaagcgttgttcctcttaggaatcgaacctggtattccccgggtacgtccttggaaggagctcct 38168232  T
Q  122 tgcca 126  Q
    |||||    
T  38168231 tgcca 38168227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 3574473 - 3574592
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    |||| |||| |||| || ||||||| |||||||||||||||  |||||| ||||||| |  ||| |||  ||| ||||||||||  | ||| ||||||||    
T  3574473 ggtgagcgactaatccgactcgtgcgtagaggcatgcgcactggccaagtgttgttctccctgggaattgaactcggtattccctaggtacgtccttgga 3574572  T
Q  112 atgagcatcttgccactgga 131  Q
    | ||||  ||||||||||||    
T  3574573 aggagctccttgccactgga 3574592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 8424633 - 8424582
Alignment:
Q  17 gcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttc 68  Q
    |||| ||||| |||||||||||||||||||||||||  ||||| ||||||||    
T  8424633 gcgattaatttggctcgtgcatagaggcatgcgcactggccaaacgttgttc 8424582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 131
Target Start/End: Complemental strand, 14124104 - 14123981
Alignment:
Q  8 caatggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatcct 107  Q
    |||||||| |||| |||| |||||||||  |||||||||||||||  |||||  |||||||||  ||| |||| |||| |||||||| |   ||| | ||    
T  14124104 caatggtgagcgactaatccggctcgtgtgtagaggcatgcgcactggccaaatgttgttccccctgggaatcgaacctggtattcctcaagtacgttct 14124005  T
Q  108 tggaatgagcatcttgccactgga 131  Q
    ||||| |||| |||||||| ||||    
T  14124004 tggaaggagcttcttgccattgga 14123981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 94
Target Start/End: Complemental strand, 10541084 - 10541018
Alignment:
Q  28 ggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattcc 94  Q
    ||||||||| ||||||||||| |||  ||||||||||||| ||  |||||||| |||||| ||||||    
T  10541084 ggctcgtgcgtagaggcatgcacactggccaagcgttgtttcccctggaaatcgaacccgatattcc 10541018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 17080127 - 17080069
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccc 70  Q
    |||| |||| |||| |||||| ||| |||||||||||||||  ||||||||||||||||    
T  17080127 ggtgtgcgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttccc 17080069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 108
Target Start/End: Original strand, 295579 - 295655
Alignment:
Q  31 tcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatcctt 108  Q
    |||||| |||||||||||||||  ||||| ||||||| ||| ||| |||| || | |||||||||||||||| |||||    
T  295579 tcgtgcgtagaggcatgcgcactggccaaacgttgtt-cctctgggaatcgaatctggtattccccggatacgtcctt 295655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 131
Target Start/End: Original strand, 6032737 - 6032786
Alignment:
Q  82 aacccggtattccccggatacatccttggaatgagcatcttgccactgga 131  Q
    ||||||||||||||||| ||| ||||||||| ||||  ||||||||||||    
T  6032737 aacccggtattccccgggtacgtccttggaaggagctccttgccactgga 6032786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 97
Target Start/End: Complemental strand, 13436852 - 13436811
Alignment:
Q  56 ccaagcgttgttccctttggaaatcaaacccggtattccccg 97  Q
    |||||||||||||||| ||| |||| ||||||||||||||||    
T  13436852 ccaagcgttgttccctctgggaatcgaacccggtattccccg 13436811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 129
Target Start/End: Complemental strand, 20421841 - 20421741
Alignment:
Q  28 ggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatcttgccac 127  Q
    ||||| ||| |||||||||||||||  |||||| |||||||||  |||||||| || || ||||||||| ||||| || ||| || ||||  ||||||||    
T  20421841 ggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctggaaatcgaa-ccagtattccccagatacgtctttgaaaggagctccttgccac 20421743  T
Q  128 tg 129  Q
    ||    
T  20421742 tg 20421741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 60; Significance: 3e-25; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 319504 - 319385
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||| ||| |||| | |||| |||||||||| ||||||||  ||||||||||||||||  | |||||||||||||||||||||||||||| ||||||||    
T  319504 ggtggacgactaatccagctcatgcatagagggatgcgcactggccaagcgttgttccccctagaaatcaaacccggtattccccggatacgtccttgga 319405  T
Q  112 atgagcatcttgccactgga 131  Q
    | ||||  ||||||||||||    
T  319404 aggagctccttgccactgga 319385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 38 - 102
Target Start/End: Complemental strand, 139491 - 139427
Alignment:
Q  38 tagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatac 102  Q
    |||||||||| ||||  ||||||||||||||| ||||| |||| |||||| |||||||| |||||    
T  139491 tagaggcatgtgcactggccaagcgttgttccttttgggaatcgaacccgatattccccagatac 139427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 412097 - 412158
Alignment:
Q  56 ccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagc 117  Q
    |||||||||||||||  ||  |||| ||| ||||||||||||||||| ||||||||| ||||    
T  412097 ccaagcgttgttccccctgtgaatcgaactcggtattccccggatacgtccttggaaggagc 412158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 3e-25; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 8 - 131
Target Start/End: Original strand, 2467141 - 2467264
Alignment:
Q  8 caatggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatcct 107  Q
    |||| |||| ||| |||| |||||| ||||||||| |||||||||  |||||| |||||||||  |||||||| ||||||||||||||||||||| ||||    
T  2467141 caattgtggacgactaatccggctcatgcatagagacatgcgcactggccaagagttgttccccctggaaatcgaacccggtattccccggatacgtcct 2467240  T
Q  108 tggaatgagcatcttgccactgga 131  Q
    ||||| ||||  ||||||||||||    
T  2467241 tggaaggagctccttgccactgga 2467264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 28 - 131
Target Start/End: Original strand, 38922457 - 38922560
Alignment:
Q  28 ggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatcttgccac 127  Q
    ||||||||| || ||||||||||||  ||||||||||||||||| ||| |||| ||||||||||||||||| ||| ||||||||| ||||  ||||||||    
T  38922457 ggctcgtgcgtaaaggcatgcgcactggccaagcgttgttccctctgggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccac 38922556  T
Q  128 tgga 131  Q
    ||||    
T  38922557 tgga 38922560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 13 - 131
Target Start/End: Original strand, 14666099 - 14666217
Alignment:
Q  13 gtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaa 112  Q
    |||||||| ||||  |||| |||| |||||||||||||||  |||||| |||||| ||  ||| |||| ||||||||||||||||||||| |||||||||    
T  14666099 gtgggcgactaatctggcttgtgcgtagaggcatgcgcactggccaagtgttgtttcccctgggaatcgaacccggtattccccggatacgtccttggaa 14666198  T
Q  113 tgagcatcttgccactgga 131  Q
    |||||  ||||||||||||    
T  14666199 tgagctccttgccactgga 14666217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 8141184 - 8141066
Alignment:
Q  13 gtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaa 112  Q
    |||| ||| |||||| |||| ||| |||||||||||||||  ||||||||||||| ||  |||||||| |||||||||||||||| |||| |||||||||    
T  8141184 gtggacgactaattcagctcatgcgtagaggcatgcgcactggccaagcgttgtttcccctggaaatcgaacccggtattccccgaatacgtccttggaa 8141085  T
Q  113 tgagcatcttgccactgga 131  Q
      |||  ||||||||||||    
T  8141084 gcagctccttgccactgga 8141066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 22 - 131
Target Start/End: Original strand, 1013014 - 1013123
Alignment:
Q  22 taattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatct 121  Q
    ||||||||||| ||| |||||||||| | ||  ||||||||||||||||  ||| |||| ||||||||||||||||||||| |||||||||  |||  ||    
T  1013014 taattcggctcatgcgtagaggcatgtgtactggccaagcgttgttccccctgggaatcgaacccggtattccccggatacgtccttggaaaaagctcct 1013113  T
Q  122 tgccactgga 131  Q
    ||||||||||    
T  1013114 tgccactgga 1013123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 15884583 - 15884701
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||||||| |||| |||||||||| |||||||||||||||  |||||| |||||||||  ||| |||| ||||||||||||||| | ||| ||||||||    
T  15884583 ggtgggcgactaatccggctcgtgcgtagaggcatgcgcacttgccaagtgttgttccc-ctgggaatcgaacccggtattccccaggtacgtccttgga 15884681  T
Q  112 atgagcatcttgccactgga 131  Q
    | ||||  ||| ||||||||    
T  15884682 aggagctccttaccactgga 15884701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 44893305 - 44893424
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    |||| |||| |||| |||||||||| ||||||||||| |||  ||||||| ||||||||  | |||||  ||||||||||||||||| ||| ||||||||    
T  44893305 ggtgagcgattaatccggctcgtgcgtagaggcatgcacactggccaagcattgttccccctagaaattgaacccggtattccccgggtacgtccttgga 44893404  T
Q  112 atgagcatcttgccactgga 131  Q
    | ||||  ||||||||||||    
T  44893405 aggagctccttgccactgga 44893424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 22 - 131
Target Start/End: Complemental strand, 17981514 - 17981405
Alignment:
Q  22 taattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatct 121  Q
    ||||||| ||||||| ||||||||||| |||  | |||| |||||||||  ||| |||| ||||||||||| ||||| ||||||||||||| ||||  ||    
T  17981514 taattcgactcgtgcgtagaggcatgcacactggtcaagagttgttccccctgggaatcgaacccggtatttcccgggtacatccttggaaggagctcct 17981415  T
Q  122 tgccactgga 131  Q
    ||||||||||    
T  17981414 tgccactgga 17981405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 98
Target Start/End: Complemental strand, 6042905 - 6042818
Alignment:
Q  11 tggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccgg 98  Q
    |||||||||| |||| |||||| ||| |  ||||||||||||  |||||||||||||||| |||| |||| |||||||||||||||||    
T  6042905 tggtgggcgactaatccggctcatgcgtttaggcatgcgcactggccaagcgttgttccccttgggaatcgaacccggtattccccgg 6042818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 129
Target Start/End: Complemental strand, 6100545 - 6100438
Alignment:
Q  22 taattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatct 121  Q
    |||| |||||| ||| ||| |||||||||||  |||||||||||||||   ||| |||| ||||||||||||||||||||| |||||| || ||||  ||    
T  6100545 taatccggctcatgcgtagtggcatgcgcactggccaagcgttgttcctcctgggaatcgaacccggtattccccggatacgtccttgaaaggagctcct 6100446  T
Q  122 tgccactg 129  Q
    ||||||||    
T  6100445 tgccactg 6100438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 45521251 - 45521133
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    |||| |||| |||| |||||| ||| |||||||||||||||    |||| ||||||||| | |||| || ||||||||||||||||| ||||||||||||    
T  45521251 ggtgagcgactaatccggctcatgcgtagaggcatgcgcactgatcaagtgttgttcccctgggaa-tcgaacccggtattccccgggtacatccttgga 45521153  T
Q  112 atgagcatcttgccactgga 131  Q
    |||| |  ||||||||||||    
T  45521152 atgaactccttgccactgga 45521133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 131
Target Start/End: Complemental strand, 13085605 - 13085488
Alignment:
Q  14 tgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaat 113  Q
    ||||||| ||||  ||||||||| |||||| |||| |||  || || ||||||||||| ||  |||| ||||||||||||||||||||| |||||||||     
T  13085605 tgggcgattaatctggctcgtgcgtagaggtatgcacactggctaaacgttgttccctctgagaatcgaacccggtattccccggatacgtccttggaag 13085506  T
Q  114 gagcatcttgccactgga 131  Q
    ||||  || |||||||||    
T  13085505 gagctcctcgccactgga 13085488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 43032984 - 43032865
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||||||| |||| |||||||||  |||||||||||||||  ||||||||||||||||  ||| |||| || ||| |||| ||| |||||||  |||||    
T  43032984 ggtgggcgactaatccggctcgtgtgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaatccgatatttcccagatacatttttgga 43032885  T
Q  112 atgagcatcttgccactgga 131  Q
    | || |  ||||||||||||    
T  43032884 aggaactccttgccactgga 43032865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 131
Target Start/End: Complemental strand, 6940608 - 6940522
Alignment:
Q  45 atgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatcttgccactgga 131  Q
    |||||||| ||||||||||||||||   |||||||| |||||| ||||  |||||||| ||||||||||||||  ||| ||||||||    
T  6940608 atgcgcactagccaagcgttgttccacctggaaatcgaacccgatattttccggatacctccttggaatgagctccttaccactgga 6940522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 131
Target Start/End: Original strand, 9860018 - 9860142
Alignment:
Q  8 caatggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtatt-ccccggatacatcc 106  Q
    ||||||||| ||| ||||  ||||| ||  ||||||||||| |||  |||||| |||||||||  ||| |||| ||||||||||| |||||||||| |||    
T  9860018 caatggtggacgactaatctggctcatgtgtagaggcatgcacactggccaagtgttgttccccctgggaatcgaacccggtattcccccggatacgtcc 9860117  T
Q  107 ttggaatgagcatcttgccactgga 131  Q
    |||||| ||||   |||||||||||    
T  9860118 ttggaaggagctctttgccactgga 9860142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 7673686 - 7673800
Alignment:
Q  14 tgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaat 113  Q
    |||||||| ||| |||||||||| ||||||||||| ||| |||||| ||||||||||  |   |||| |||  | |||||||| ||||| |||||||||     
T  7673686 tgggcgaaaaatccggctcgtgcgtagaggcatgcacactagccaaacgttgttccccct---aatcgaacttgatattccccagatacgtccttggaag 7673782  T
Q  114 gagcatcttgccactgga 131  Q
    ||||  ||||||||||||    
T  7673783 gagctccttgccactgga 7673800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 22 - 109
Target Start/End: Complemental strand, 10927679 - 10927592
Alignment:
Q  22 taattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttg 109  Q
    |||| |||||| ||| |||||||||||||||  |||||||||||||||   | | |||| ||||||||||||||||| ||| ||||||    
T  10927679 taatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctaggaatcgaacccggtattccccgggtacgtccttg 10927592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 24837325 - 24837206
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||| ||| |||| | |||||||| ||||||||||  |||  |||||||||||||| |  ||| |||| ||| ||||||||||||| ||| | ||||||    
T  24837325 ggtggacgactaatcctgctcgtgcttagaggcatgaacactggccaagcgttgttctccctgggaatcgaacacggtattccccgggtacgtacttgga 24837226  T
Q  112 atgagcatcttgccactgga 131  Q
    | ||||  ||||||||||||    
T  24837225 aggagctccttgccactgga 24837206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 33401826 - 33401945
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||||||| |||| || ||| ||| ||||||||||| |||  | |||| |||||||||  || ||||| ||||||||||||||||  ||| |||||| |    
T  33401826 ggtgggcgactaatccgactcatgcgtagaggcatgcacactggtcaagtgttgttccccctgaaaatcgaacccggtattccccgagtacgtccttgaa 33401925  T
Q  112 atgagcatcttgccactgga 131  Q
    | ||||  ||||||||||||    
T  33401926 aggagctccttgccactgga 33401945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 28 - 131
Target Start/End: Complemental strand, 34846880 - 34846778
Alignment:
Q  28 ggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatcttgccac 127  Q
    |||| |||| |||||||||||  ||  |||||||||||||| |  ||| |||| ||||||||||| ||||| ||| ||||||||||||||  ||||||||    
T  34846880 ggcttgtgcgtagaggcatgcatactggccaagcgttgttcaccatgggaatcgaacccggtatt-cccgggtacgtccttggaatgagctccttgccac 34846782  T
Q  128 tgga 131  Q
    ||||    
T  34846781 tgga 34846778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 14 - 112
Target Start/End: Original strand, 44031464 - 44031567
Alignment:
Q  14 tgggcgaataattcggctcgtgcatagaggcatgcgcacaa-----gccaagcgttgttccctttggaaatcaaacccggtattccccggatacatcctt 108  Q
    ||||||| |||| ||||||||||  |||||||||| ||| |     ||||||||||||||||  |||||||| |||||| |||| ||||| |||||||||    
T  44031464 tgggcgactaatccggctcgtgcgcagaggcatgcacactacactggccaagcgttgttccccctggaaatcgaacccgatatttcccggttacatcctt 44031563  T
Q  109 ggaa 112  Q
    ||||    
T  44031564 ggaa 44031567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 131
Target Start/End: Complemental strand, 18374083 - 18373974
Alignment:
Q  22 taattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatct 121  Q
    |||| |||||| ||| |||||||||||||||  | |||||||||||| |  ||  |||| |||| |||||| |||||||| ||| |||||||||||  ||    
T  18374083 taatccggctcatgcgtagaggcatgcgcactggtcaagcgttgttctccctgagaatcgaacctggtatttcccggatatatctttggaatgagctcct 18373984  T
Q  122 tgccactgga 131  Q
    ||||| ||||    
T  18373983 tgccattgga 18373974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 12 - 128
Target Start/End: Complemental strand, 2964159 - 2964043
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||||||| |||| ||| |||||| ||||||||||| ||   |||||||||||||||   | | |||| ||| ||||||||||||| ||| | ||||||    
T  2964159 ggtgggcgactaatccggttcgtgcgtagaggcatgcacattggccaagcgttgttcctcatcggaatcgaacacggtattccccgggtacgttcttgga 2964060  T
Q  112 atgagcatcttgccact 128  Q
    | ||||  |||||||||    
T  2964059 aggagctacttgccact 2964043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 11785982 - 11785894
Alignment:
Q  28 ggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagc 117  Q
    ||||| ||| ||||||||||| |||   |||| ||||| |||| |||||| || || |||||||||||||| ||| ||||||||||||||    
T  11785982 ggctcatgcgtagaggcatgcacactgcccaaacgttgctccccttggaa-tcgaatccggtattccccgggtacgtccttggaatgagc 11785894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 3e-25; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 8 - 131
Target Start/End: Original strand, 6358174 - 6358297
Alignment:
Q  8 caatggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatcct 107  Q
    ||||||||| ||| |||| |||||| ||| |||||||||||||||  |||||| |||||||||  |||||||| || | |||||||||||||||| ||||    
T  6358174 caatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctggaaatcgaatctggtattccccggatacgtcct 6358273  T
Q  108 tggaatgagcatcttgccactgga 131  Q
    | |||||||| |||||||||||||    
T  6358274 ttgaatgagcttcttgccactgga 6358297  T

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Target: chr2; HSP #2
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 12 - 117
Target Start/End: Complemental strand, 10823139 - 10823034
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||||||| |||| |||||||||| |||||||||||||||  |||||||||||||||   ||| |||||||||||||||||||||| ||| ||||||||    
T  10823139 ggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcaaacccggtattccccgggtacgtccttgga 10823040  T
Q  112 atgagc 117  Q
    | ||||    
T  10823039 aggagc 10823034  T

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Target: chr2; HSP #3
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 3643914 - 3644033
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||| ||| |||| | |||| ||| |||||||||||||||  |||||||||||||||   | |||||||||||||||||||||||||||| ||||||||    
T  3643914 ggtggacgactaatccagctcatgcgtagaggcatgcgcactggccaagcgttgttcctcgtagaaatcaaacccggtattccccggatacgtccttgga 3644013  T
Q  112 atgagcatcttgccactgga 131  Q
    ||||||  ||| ||||||||    
T  3644014 atgagctcctttccactgga 3644033  T

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Target: chr2; HSP #4
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 25540431 - 25540550
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||| ||| |||| |||||||||| |||||||||||||||  ||||||||||||||||  | | |||| ||||| ||||||||| ||||| ||||||||    
T  25540431 ggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctaggaatcgaacccagtattccccagatacgtccttgga 25540530  T
Q  112 atgagcatcttgccactgga 131  Q
    ||||||  ||||||||||||    
T  25540531 atgagctccttgccactgga 25540550  T

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Target: chr2; HSP #5
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 38005481 - 38005362
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||||||| |||| |||||| ||  |||||||||||||||  |||||||||||||||| |||| |||| ||||| ||||||||||| ||| ||||||||    
T  38005481 ggtgggcgactaatccggctcatgtgtagaggcatgcgcactggccaagcgttgttccccttgggaatcgaacccagtattccccgggtacgtccttgga 38005382  T
Q  112 atgagcatcttgccactgga 131  Q
    | ||||  ||||||||||||    
T  38005381 aggagctccttgccactgga 38005362  T

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Target: chr2; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 22 - 132
Target Start/End: Complemental strand, 41220704 - 41220594
Alignment:
Q  22 taattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatct 121  Q
    ||||||||||| ||| |||||||||||||||  |||||||||||||||   ||| |||| ||||||||||||||||| ||| ||||||||| ||||  ||    
T  41220704 taattcggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcgaacccggtattccccgggtacgtccttggaaggagctcct 41220605  T
Q  122 tgccactggaa 132  Q
    |||||||||||    
T  41220604 tgccactggaa 41220594  T

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Target: chr2; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 17 - 131
Target Start/End: Original strand, 45263699 - 45263813
Alignment:
Q  17 gcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgag 116  Q
    |||| |||| |||||||||| |||||||||||||||  ||||||||||||||||| ||| |||| |||||||||||||||||||| ||  ||| || |||    
T  45263699 gcgattaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccctctgggaatcgaacccggtattccccggataaatttttgaaaggag 45263798  T
Q  117 catcttgccactgga 131  Q
    |  ||||||||||||    
T  45263799 ctccttgccactgga 45263813  T

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Target: chr2; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 11 - 112
Target Start/End: Complemental strand, 44139564 - 44139463
Alignment:
Q  11 tggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgg 110  Q
    |||||||||| |||| |||||||||| |||||||| ||||||  ||||||||||||||||  ||| |||| ||||||||||||||| ||| |||||||||    
T  44139564 tggtgggcgactaatccggctcgtgcgtagaggcacgcgcactggccaagcgttgttccccctgggaatcgaacccggtattccccagatgcatccttgg 44139465  T
Q  111 aa 112  Q
    ||    
T  44139464 aa 44139463  T

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Target: chr2; HSP #9
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 12 - 116
Target Start/End: Original strand, 9360775 - 9360879
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||||||| ||||||||||||||| |||||||||||||||  ||||| ||||||| ||| | | |||| |||| |||||||||||| ||| ||||||||    
T  9360775 ggtgggcgactaattcggctcgtgcgtagaggcatgcgcactggccaaacgttgtttcctctagtaatcgaacctggtattccccgggtacgtccttgga 9360874  T
Q  112 atgag 116  Q
    |||||    
T  9360875 atgag 9360879  T

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Target: chr2; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 8 - 131
Target Start/End: Complemental strand, 34356289 - 34356166
Alignment:
Q  8 caatggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatcct 107  Q
    ||||||||  ||| |||| |||||| |||||||||||||||||||   ||||| |||||||||  |||||||| ||||||||||||||| ||||| ||||    
T  34356289 caatggtgcacgattaatccggctcatgcatagaggcatgcgcactgaccaagtgttgttccccctggaaatcgaacccggtattccccagatacgtcct 34356190  T
Q  108 tggaatgagcatcttgccactgga 131  Q
    |||||  |||  ||||||||||||    
T  34356189 tggaaatagctccttgccactgga 34356166  T

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Target: chr2; HSP #11
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 8410209 - 8410091
Alignment:
Q  13 gtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaa 112  Q
    |||||||| |||| |||||||||| |||||||||||||||  |||||| |||||||||  ||| |||| |||||| ||||| |||| ||| |||||||||    
T  8410209 gtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccgatattctccgggtacgtccttggaa 8410110  T
Q  113 tgagcatcttgccactgga 131  Q
     ||||  ||||||||||||    
T  8410109 ggagctccttgccactgga 8410091  T

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Target: chr2; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 12 - 128
Target Start/End: Complemental strand, 44945672 - 44945557
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||||||| |||| |||||||||| ||||||||||||||| | |||||||||||| ||| ||| |||||||||| |||||| |||  ||| ||||||||    
T  44945672 ggtgggcgactaatccggctcgtgcgtagaggcatgcgcactatccaagcgttgtt-cctctgggaatcaaacccagtattctccgagtacgtccttgga 44945574  T
Q  112 atgagcatcttgccact 128  Q
    | ||||  |||||||||    
T  44945573 aggagctccttgccact 44945557  T

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Target: chr2; HSP #13
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 331580 - 331461
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||||||| |||| |||||| ||| |||| ||||||||||  |||||| |||||||||  ||| |||| ||||||||||||||||| ||| ||||||||    
T  331580 ggtgggcgactaatccggctcatgcgtagaagcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccgggtacgtccttgga 331481  T
Q  112 atgagcatcttgccactgga 131  Q
    | ||||   |||||||||||    
T  331480 aagagctcattgccactgga 331461  T

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Target: chr2; HSP #14
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 38962842 - 38962723
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||| ||| |||| ||| || ||| |||||||||||||||  |||||||||||||||   || ||||| ||||||||||||||||||||| |||||| |    
T  38962842 ggtggacgactaatccggttcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgaaaatcgaacccggtattccccggatacgtccttgaa 38962743  T
Q  112 atgagcatcttgccactgga 131  Q
    ||||||  ||| ||||||||    
T  38962742 atgagctccttaccactgga 38962723  T

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Target: chr2; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 12455393 - 12455303
Alignment:
Q  8 caatggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccgg 98  Q
    |||||||| |||| |||| |||||||||| |||||||||||||||  || |||||||||| ||  |||||||| |||||||||||||||||    
T  12455393 caatggtgagcgactaatccggctcgtgcgtagaggcatgcgcactggctaagcgttgtttcccctggaaatcgaacccggtattccccgg 12455303  T

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Target: chr2; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 21286506 - 21286404
Alignment:
Q  29 gctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatcttgccact 128  Q
    |||||||| |||||||||||||||  | ||||||||||| |   ||| |||| ||||||||||||||||||||| ||||||||| ||||  |||||||||    
T  21286506 gctcgtgcgtagaggcatgcgcactggtcaagcgttgtttcgcctgggaatcgaacccggtattccccggatacgtccttggaaggagctccttgccact 21286407  T
Q  129 gga 131  Q
    |||    
T  21286406 gga 21286404  T

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Target: chr2; HSP #17
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 20612577 - 20612682
Alignment:
Q  27 cggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttgga-aatcaaacccggtattccccggatacatccttggaatgagcatcttgcc 125  Q
    |||||| |||||||||||||||||||  |||||| ||||||||||   || |||| |||||||||||||||| ||||| |||||||| ||||  ||||||    
T  20612577 cggctcatgcatagaggcatgcgcactggccaagtgttgttccctcctgagaatcgaacccggtattccccgaatacaaccttggaaggagctccttgcc 20612676  T
Q  126 actgga 131  Q
    ||||||    
T  20612677 actgga 20612682  T

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Target: chr2; HSP #18
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 8 - 117
Target Start/End: Complemental strand, 35946821 - 35946713
Alignment:
Q  8 caatggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatcct 107  Q
    ||||||||| ||| |||| |||||||||| ||||||||||| ||   |||||||||||||||| | || |||| ||| ||||||||||||||||| ||||    
T  35946821 caatggtggacgactaatccggctcgtgcgtagaggcatgcacaatggccaagcgttgttcccctagg-aatcgaactcggtattccccggatacgtcct 35946723  T
Q  108 tggaatgagc 117  Q
    | ||||||||    
T  35946722 tagaatgagc 35946713  T

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Target: chr2; HSP #19
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 38 - 131
Target Start/End: Original strand, 39806938 - 39807031
Alignment:
Q  38 tagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatcttgccactgga 131  Q
    |||||||||||||||  ||||| ||||||| |  |||| |||| ||||||||||||||||| ||| |||||| || ||||||||||||||||||    
T  39806938 tagaggcatgcgcactggccaaacgttgtttctcttgggaatcgaacccggtattccccgggtacgtccttgtaaggagcatcttgccactgga 39807031  T

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Target: chr2; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 18902557 - 18902676
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||||||| ||||  ||||||||| ||||| || ||||||  | ||||||||||||||  ||| |||| ||||||||||||||||  ||| ||||||||    
T  18902557 ggtgggcgactaatctggctcgtgcgtagagacacgcgcactggtcaagcgttgttccccgtgggaatcgaacccggtattccccgagtacgtccttgga 18902656  T
Q  112 atgagcatcttgccactgga 131  Q
    | ||||  ||||||||||||    
T  18902657 aggagctccttgccactgga 18902676  T

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Target: chr2; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 19976834 - 19976953
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||||||| ||||||| ||  ||| ||||| |||||||||   |||| |||| |||||  || ||||| ||||||||||||||||||||| ||||||||    
T  19976834 ggtgggcgactaattcgacttatgcgtagagacatgcgcactgaccaaacgttattccccctgaaaatcgaacccggtattccccggatacgtccttgga 19976933  T
Q  112 atgagcatcttgccactgga 131  Q
    | ||||  ||||||||||||    
T  19976934 aagagctacttgccactgga 19976953  T

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Target: chr2; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 37560252 - 37560133
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||| ||| |||| |||||||||| |||||||||||||||   |||| |||||||||| |||  |||| |||| |||||||| ||| ||| ||||||||    
T  37560252 ggtggacgattaatccggctcgtgcgtagaggcatgcgcactgaccaaacgttgttccccttgagaatcgaacctggtattcctcgggtacgtccttgga 37560153  T
Q  112 atgagcatcttgccactgga 131  Q
    | |||| |||| ||||||||    
T  37560152 aggagcttcttaccactgga 37560133  T

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Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 131
Target Start/End: Complemental strand, 7747343 - 7747234
Alignment:
Q  22 taattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatct 121  Q
    |||| |||||| ||| ||||||||||| |||  ||||| |||||||||   | | |||| ||||||||||||||||||||| ||||||||| ||||  ||    
T  7747343 taatccggctcatgcgtagaggcatgcacactggccaaacgttgttcctcctaggaatcgaacccggtattccccggatacgtccttggaaggagctcct 7747244  T
Q  122 tgccactgga 131  Q
    ||||||||||    
T  7747243 tgccactgga 7747234  T

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Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 107
Target Start/End: Complemental strand, 7787133 - 7787040
Alignment:
Q  14 tgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatcct 107  Q
    ||||||| |||| |||||||||| |||||||||||| ||  ||||||  ||||||||  |||||||| ||||||||||||||||| ||| ||||    
T  7787133 tgggcgactaatccggctcgtgcgtagaggcatgcgtactggccaagtattgttccccctggaaatcgaacccggtattccccgggtacgtcct 7787040  T

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Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 117
Target Start/End: Complemental strand, 11069957 - 11069852
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||| ||| |||||| |||||||| |||||| ||||||||  ||||| ||||||||||  | | |||| |||| |||||||||||| ||| ||||||||    
T  11069957 ggtggacgactaattcagctcgtgcgtagaggtatgcgcactggccaaacgttgttccccctcggaatcgaacctggtattccccgggtacgtccttgga 11069858  T
Q  112 atgagc 117  Q
    ||||||    
T  11069857 atgagc 11069852  T

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Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 15079558 - 15079462
Alignment:
Q  16 ggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaa 112  Q
    ||||| ||||| ||||||||| ||||| ||||| |||  | ||||||||||||||  |||||||| ||||| ||||||||||| ||| |||||||||    
T  15079558 ggcgactaatttggctcgtgcgtagagtcatgcacactggtcaagcgttgttccccctggaaatcgaaccctgtattccccgggtacgtccttggaa 15079462  T

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Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 22593213 - 22593095
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||| ||| |||| |||||| ||| |||||||||||||||  ||||| ||||||||||  ||| |||| ||| | ||||||||||| ||| ||||||||    
T  22593213 ggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaa-cgttgttccccctgggaatcgaactcagtattccccgggtacgtccttgga 22593115  T
Q  112 atgagcatcttgccactgga 131  Q
    | ||||  ||||||||||||    
T  22593114 aggagctccttgccactgga 22593095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 41031933 - 41032051
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    |||||| || |||| |||||||||| ||||||||||| |||  |||||| |||||||||  ||| |||| |||||||| ||||| || ||| ||||||||    
T  41031933 ggtgggtgactaatccggctcgtgcgtagaggcatgcacactggccaagtgttgttccccctgggaatcgaacccggtgttccctgg-tacgtccttgga 41032031  T
Q  112 atgagcatcttgccactgga 131  Q
    | ||||  ||||||||||||    
T  41032032 aggagctccttgccactgga 41032051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 42770678 - 42770797
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||| ||| |||| ||||||||||  ||||||||||||||  ||||||||||||||||  ||  |||  ||||||||||| | ||||||| ||||||||    
T  42770678 ggtggacgattaatccggctcgtgcgaagaggcatgcgcactggccaagcgttgttccccctgagaattgaacccggtatttctcggatacgtccttgga 42770777  T
Q  112 atgagcatcttgccactgga 131  Q
    | ||||   |||||||||||    
T  42770778 aggagctctttgccactgga 42770797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 2550946 - 2550828
Alignment:
Q  13 gtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaa 112  Q
    |||||||| |||| |||||| ||| ||||| |||||||||  || ||| ||||||||   ||| |||| |||||| |||||||||||||| |||||| ||    
T  2550946 gtgggcgactaatccggctcatgcgtagagacatgcgcactggctaagtgttgttcctcctgggaatcgaacccgatattccccggatacgtccttgtaa 2550847  T
Q  113 tgagcatcttgccactgga 131  Q
     ||||  ||||||||||||    
T  2550846 ggagctccttgccactgga 2550828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 112
Target Start/End: Complemental strand, 16035020 - 16034916
Alignment:
Q  8 caatggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatcct 107  Q
    |||||||| |||| |||| |||||||| | || |||||||| |||  | |||||||||||||   || ||||| ||||||||||||| ||||||| ||||    
T  16035020 caatggtgagcgactaatccggctcgtacgtataggcatgcacactggtcaagcgttgttccgcctgaaaatcgaacccggtattcctcggatacgtcct 16034921  T
Q  108 tggaa 112  Q
    |||||    
T  16034920 tggaa 16034916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 8 - 131
Target Start/End: Complemental strand, 12864307 - 12864184
Alignment:
Q  8 caatggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatcct 107  Q
    ||||||||| ||| ||||  ||||| |||  ||||||||||||||   ||||| |||||||||  |||||||| || ||||||||||||| |||| || |    
T  12864307 caatggtggacgactaatctggctcatgcgcagaggcatgcgcactgaccaagtgttgttccccctggaaatcgaatccggtattccccgaatacgtcat 12864208  T
Q  108 tggaatgagcatcttgccactgga 131  Q
    ||||| ||||  |||| |||||||    
T  12864207 tggaaggagctccttgtcactgga 12864184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 29422294 - 29422175
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||| ||| |||| |||||||||| || ||| |||| ||   |||||| |||||||||| |||||||| ||||| ||||||||||| ||| |||||| |    
T  29422294 ggtggacgactaatccggctcgtgcgtaaaggtatgctcattggccaagtgttgttccctctggaaatcgaacccagtattccccgggtacgtccttgaa 29422195  T
Q  112 atgagcatcttgccactgga 131  Q
    | ||||  ||||| ||||||    
T  29422194 aggagctccttgctactgga 29422175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 131
Target Start/End: Original strand, 21180346 - 21180460
Alignment:
Q  17 gcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgag 116  Q
    |||| |||| |||||||||| |||||||||| ||||  |||||| ||||||| |  ||| |||| || |||||||||  ||| ||| ||||||||| |||    
T  21180346 gcgactaatccggctcgtgcgtagaggcatgtgcactggccaagtgttgttctccatgggaatcgaatccggtattcttcgggtacgtccttggaaggag 21180445  T
Q  117 catcttgccactgga 131  Q
    |  ||||||||||||    
T  21180446 ctccttgccactgga 21180460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 43303321 - 43303399
Alignment:
Q  14 tgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtatt 92  Q
    ||||||| |||| | ||||||||||||||||||||| ||  | |||||||||||||| ||| ||||| |||||| ||||    
T  43303321 tgggcgattaatccagctcgtgcatagaggcatgcgtactggtcaagcgttgttccccttgaaaatcgaacccgatatt 43303399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 12 - 112
Target Start/End: Original strand, 3811718 - 3811818
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||||||| |||| |||||| ||| ||||||||||||||    ||||| |||||||||| ||| |||| |||||| |||||| ||  ||| ||||||||    
T  3811718 ggtgggcgagtaatccggctcatgcgtagaggcatgcgcattgaccaagtgttgttccctctgggaatcgaacccgatattcctcgagtacgtccttgga 3811817  T
Q  112 a 112  Q
    |    
T  3811818 a 3811818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 16 - 92
Target Start/End: Complemental strand, 29653702 - 29653626
Alignment:
Q  16 ggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtatt 92  Q
    ||||| ||||||||||||||| |||||||||||||||   ||||||||||||  |  |||||||| || ||||||||    
T  29653702 ggcgactaattcggctcgtgcgtagaggcatgcgcactgcccaagcgttgttttccctggaaatcgaatccggtatt 29653626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 10026643 - 10026762
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||| ||| |||| |||||| ||| |||||||||||||||  ||||| ||||||||||  ||  |||| |||||||||||  |||  ||| ||||||||    
T  10026643 ggtggtcgactaatccggctcatgcgtagaggcatgcgcactggccaaacgttgttccccctgagaatcgaacccggtattttccgagtacgtccttgga 10026742  T
Q  112 atgagcatcttgccactgga 131  Q
    | ||||  ||||||| ||||    
T  10026743 aggagctccttgccattgga 10026762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 10046504 - 10046622
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||| ||| |||| |||||| ||| |||||||||||||||  | ||| ||||||| || |||  |||| |||||||||||| |||||||| | ||||||    
T  10046504 ggtggtcgactaatccggctcatgcgtagaggcatgcgcact-gtcaaacgttgtttcccttgagaatcgaacccggtattctccggatacgttcttgga 10046602  T
Q  112 atgagcatcttgccactgga 131  Q
    | ||||  ||||||| ||||    
T  10046603 aggagctccttgccattgga 10046622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 117
Target Start/End: Original strand, 34346340 - 34346419
Alignment:
Q  38 tagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagc 117  Q
    ||||||||||| |||  |||||| |||||||||  ||  |||||||||| ||||||||| | ||| ||||||||||||||    
T  34346340 tagaggcatgcacactggccaagtgttgttccccctgataatcaaacccagtattccccaggtacgtccttggaatgagc 34346419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 30 - 112
Target Start/End: Complemental strand, 10669653 - 10669571
Alignment:
Q  30 ctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaa 112  Q
    ||||||| ||||| |||||||||  |||||||||||||| |  ||| ||||||||||||||  |||| | ||| |||||||||    
T  10669653 ctcgtgcgtagagacatgcgcactggccaagcgttgttctccctgggaatcaaacccggtagcccccaggtacgtccttggaa 10669571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 27726020 - 27725962
Alignment:
Q  11 tggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttcc 69  Q
    |||||||||| |||| ||||| |||| |||||||||||||||  ||||||| |||||||    
T  27726020 tggtgggcgactaatccggctagtgcgtagaggcatgcgcactggccaagcattgttcc 27725962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 14 - 112
Target Start/End: Original strand, 28616408 - 28616506
Alignment:
Q  14 tgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaa 112  Q
    ||||||| ||||  ||||||||| |||||||||||||||   ||||| ||| |||||  || ||||| |||||| |||||| ||||||  |||||||||    
T  28616408 tgggcgactaatctggctcgtgcgtagaggcatgcgcactgcccaagtgttattccccctgaaaatcgaacccgatattccgcggatatgtccttggaa 28616506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 131
Target Start/End: Original strand, 13026448 - 13026557
Alignment:
Q  22 taattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatct 121  Q
    |||| |||||| ||| |||||||||||||||  ||||| | |||||||   ||  |||| |||||| ||||||| |||||| ||||||||| |||   ||    
T  13026448 taatccggctcatgcgtagaggcatgcgcactggccaatcattgttcctcctgataatcgaacccgatattccctggatacgtccttggaaggagttcct 13026547  T
Q  122 tgccactgga 131  Q
    ||||||||||    
T  13026548 tgccactgga 13026557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 56; Significance: 8e-23; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 9927 - 9808
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||| ||| |||| |||||||||| |||||||||||||||  ||||||||||||||||  |||||||| || |||||||||| | ||||||||||||||    
T  9927 ggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctggaaatcgaatccggtattcctcagatacatccttgga 9828  T
Q  112 atgagcatcttgccactgga 131  Q
    | ||||  |||| |||||||    
T  9827 aggagctccttgtcactgga 9808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 8e-23; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 8 - 131
Target Start/End: Complemental strand, 19572808 - 19572685
Alignment:
Q  8 caatggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatcct 107  Q
    ||||||||  ||| |||| |||||| ||| |||||||||||||||  |||||| |||||||||  ||| |||| ||||||||||||||||||||| ||||    
T  19572808 caatggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatctaacccggtattccccggatacgtcct 19572709  T
Q  108 tggaatgagcatcttgccactgga 131  Q
    ||||| ||||  ||||||||||||    
T  19572708 tggaaggagctccttgccactgga 19572685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 30349659 - 30349540
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||| ||| |||||| |||| |||||||||||||||||||  ||||| | ||||||||  | |||||||||||||||||||||||||||| ||||||||    
T  30349659 ggtggacgactaattcagctcatgcatagaggcatgcgcactggccaatcattgttccccctagaaatcaaacccggtattccccggatacgtccttgga 30349560  T
Q  112 atgagcatcttgccactgga 131  Q
    | || |  ||||||||||||    
T  30349559 aggaactccttgccactgga 30349540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 8 - 131
Target Start/End: Complemental strand, 1538515 - 1538392
Alignment:
Q  8 caatggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatcct 107  Q
    ||||||||| ||| |||| |||||| ||| |||||||||||||||  |||||| |||||||||  ||| |||| |||||||||||||||| |||| ||||    
T  1538515 caatggtggacgattaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccgaatacgtcct 1538416  T
Q  108 tggaatgagcatcttgccactgga 131  Q
     |||| ||||  ||||||||||||    
T  1538415 cggaaggagctccttgccactgga 1538392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 8 - 131
Target Start/End: Original strand, 42861241 - 42861364
Alignment:
Q  8 caatggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatcct 107  Q
    ||||||||| ||| |||| |||||| ||| |||||||||||||||  |||||| |||||| || | ||||||  |||||| |||||||||||||  ||||    
T  42861241 caatggtggacgattaatccggctcatgcgtagaggcatgcgcactggccaagtgttgtttccctgggaaattgaacccgatattccccggatatgtcct 42861340  T
Q  108 tggaatgagcatcttgccactgga 131  Q
    ||||||||||  ||||||||||||    
T  42861341 tggaatgagctccttgccactgga 42861364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 22 - 131
Target Start/End: Original strand, 25417220 - 25417329
Alignment:
Q  22 taattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatct 121  Q
    |||| |||||||| | |||||||||||||||  ||||||||||||||||  ||| |||| ||||||||||||||||  ||| ||||||||| ||||  ||    
T  25417220 taatccggctcgttcgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaacccggtattccccgagtacgtccttggaaggagctcct 25417319  T
Q  122 tgccactgga 131  Q
    ||||||||||    
T  25417320 tgccactgga 25417329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 12 - 128
Target Start/End: Original strand, 38897746 - 38897861
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||||| | |||| |||||||||| |||||||||||||||  ||||||||||||||||  |||||||| |||||||||||||||  |||| |||||| |    
T  38897746 ggtgggcaactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccc-ctggaaatcgaacccggtattccccatatacgtccttgta 38897844  T
Q  112 atgagcatcttgccact 128  Q
    | ||||  |||||||||    
T  38897845 aagagctccttgccact 38897861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 8 - 131
Target Start/End: Complemental strand, 14152134 - 14152011
Alignment:
Q  8 caatggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatcct 107  Q
    ||||||||| ||| |||| |||||| || ||||| |||||| |||  ||||||||||||||||| ||  |||| ||||||||||||||| | |||||| |    
T  14152134 caatggtggacgattaatccggctcatggatagaagcatgcacactggccaagcgttgttccctatgagaatcgaacccggtattccccaggtacatcat 14152035  T
Q  108 tggaatgagcatcttgccactgga 131  Q
    ||||| ||||  ||||||||||||    
T  14152034 tggaaggagctccttgccactgga 14152011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 8 - 131
Target Start/End: Complemental strand, 20525922 - 20525799
Alignment:
Q  8 caatggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatcct 107  Q
    ||||||||| ||| |||| |||||| ||| |||||||||||||||  || ||| ||||||||   ||| |||| |||||| |||||||||||||||||||    
T  20525922 caatggtggacgactaatccggctcatgcgtagaggcatgcgcactggcgaagtgttgttccacctgggaatcgaacccgatattccccggatacatcct 20525823  T
Q  108 tggaatgagcatcttgccactgga 131  Q
    || || ||||  ||||||||||||    
T  20525822 tgaaaggagctccttgccactgga 20525799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 43 - 129
Target Start/End: Complemental strand, 1899050 - 1898964
Alignment:
Q  43 gcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatcttgccactg 129  Q
    ||||||||||  ||||||||||||||||  ||| |||| ||||||||||||||||| ||||||||||||| ||||  ||||||||||    
T  1899050 gcatgcgcactggccaagcgttgttccccctgggaatcgaacccggtattccccgggtacatccttggaaggagctccttgccactg 1898964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 12 - 114
Target Start/End: Original strand, 20682644 - 20682746
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||| ||| |||| |||||||||| |||||||||||||||  ||||||||||||||||  |||||||| |||||  |||||||||| ||| ||||| ||    
T  20682644 ggtggtcgattaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctggaaatctaacccaatattccccgggtacgtccttaga 20682743  T
Q  112 atg 114  Q
    |||    
T  20682744 atg 20682746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 38 - 131
Target Start/End: Original strand, 5731973 - 5732066
Alignment:
Q  38 tagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatcttgccactgga 131  Q
    |||||||||||||||  |||||||||||||||   ||| |||| ||||||||||||||||| ||| ||||||||| ||||  ||||||||||||    
T  5731973 tagaggcatgcgcactggccaagcgttgttcctcctgggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactgga 5732066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 12 - 108
Target Start/End: Complemental strand, 12081988 - 12081892
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatcctt 108  Q
    ||||| ||| ||||||||||||||| |||| ||||||||||  ||||||||||||||||  ||  |||| ||||| ||||||||||||||| |||||    
T  12081988 ggtggacgactaattcggctcgtgcgtagatgcatgcgcactggccaagcgttgttccccctgagaatcgaacccagtattccccggatacgtcctt 12081892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 28857193 - 28857089
Alignment:
Q  27 cggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatcttgcca 126  Q
    |||||| ||| |||||||||||||||  |||||| |||||||||  ||| |||| ||||||||||||||||| | | ||||||||| ||||  |||||||    
T  28857193 cggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccgggtgcgtccttggaaggagctccttgcca 28857094  T
Q  127 ctgga 131  Q
    |||||    
T  28857093 ctgga 28857089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 7866661 - 7866542
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||||||| |||| ||| |||||| ||||||||||| |||  |||||||||||||||   | | |||| ||||||||||||| ||| ||| ||||||||    
T  7866661 ggtgggcgactaatccggttcgtgcgtagaggcatgcacactggccaagcgttgttcctcctcggaatcgaacccggtattcctcgggtacgtccttgga 7866562  T
Q  112 atgagcatcttgccactgga 131  Q
    | ||||  ||||||||||||    
T  7866561 aggagctccttgccactgga 7866542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 131
Target Start/End: Complemental strand, 26077205 - 26077102
Alignment:
Q  28 ggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatcttgccac 127  Q
    ||||||||| |||||||||| ||||  ||||||||||||||||| ||| |||| ||||  |||||||||  |||| ||||||||||||||  ||| ||||    
T  26077205 ggctcgtgcgtagaggcatgtgcactggccaagcgttgttccctctgggaatcgaacctagtattccccaaatacgtccttggaatgagctccttaccac 26077106  T
Q  128 tgga 131  Q
    ||||    
T  26077105 tgga 26077102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 42086407 - 42086292
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||| ||| |||| |||||| ||| |||||||||||||||  | ||||||||||||||  ||| |||| ||||||||||||| ||| ||| ||||||||    
T  42086407 ggtggacgactaatccggctcatgcgtagaggcatgcgcactggtcaagcgttgttccccctgggaatcgaacccggtattcctcgggtacgtccttgga 42086308  T
Q  112 atgagcatcttgccac 127  Q
    | ||||  ||||||||    
T  42086307 aggagctccttgccac 42086292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 117
Target Start/End: Complemental strand, 5079411 - 5079306
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||||||| |||| |||||||||| |||| |||||||||    ||||||| |||||||  |||||||||| ||||||||||| ||||||| | ||||||    
T  5079411 ggtgggcgactaatccggctcgtgcgtagaagcatgcgcattgaccaagcgctgttccccctggaaatcaaccccggtattccacggatacgtgcttgga 5079312  T
Q  112 atgagc 117  Q
    | ||||    
T  5079311 aggagc 5079306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 12 - 128
Target Start/End: Original strand, 11845828 - 11845944
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||||||| ||||||||||| | | |||||||||||||||  ||||| ||||||||||  | |||||| |||||| |||| | ||| ||| ||||||||    
T  11845828 ggtgggcgattaattcggctcatacgtagaggcatgcgcactggccaaacgttgttccccctcgaaatcgaacccgatatttctcgggtacgtccttgga 11845927  T
Q  112 atgagcatcttgccact 128  Q
    | ||||  |||||||||    
T  11845928 aggagctccttgccact 11845944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 28 - 132
Target Start/End: Complemental strand, 15034139 - 15034036
Alignment:
Q  28 ggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatcttgccac 127  Q
    ||||| ||| ||||||||||| |||   ||||| |||||| ||  |||||||  ||||||||||||||||| ||||||||||||| |||| |||||||||    
T  15034139 ggctcatgcgtagaggcatgcacactgaccaagtgttgtttcccatggaaattgaacccggtattccccgggtacatccttggaaggagc-tcttgccac 15034041  T
Q  128 tggaa 132  Q
    |||||    
T  15034040 tggaa 15034036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 131
Target Start/End: Original strand, 4016278 - 4016401
Alignment:
Q  8 caatggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatcct 107  Q
    |||||||| || | |||| |||||||||  |||||||||||||||  |||||| |||||||||  ||  |||| |||||| |||| | | | ||| ||||    
T  4016278 caatggtgagcaactaatccggctcgtgtgtagaggcatgcgcactggccaagtgttgttccccctgataatcgaacccgatatttctcaggtacgtcct 4016377  T
Q  108 tggaatgagcatcttgccactgga 131  Q
    |||||||||| |||||||||||||    
T  4016378 tggaatgagcttcttgccactgga 4016401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 9812952 - 9812833
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||||||| |||| ||| || ||| |||| |||||| |||  |||||||||||||||   | | |||| ||||||||||||||||| ||| ||||||||    
T  9812952 ggtgggcgactaatccggttcatgcgtagaagcatgcacactggccaagcgttgttcctcctcggaatcgaacccggtattccccgggtacgtccttgga 9812853  T
Q  112 atgagcatcttgccactgga 131  Q
    | ||||  ||||||||||||    
T  9812852 aggagctccttgccactgga 9812833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 42291532 - 42291618
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccgg 98  Q
    ||||| ||| |||| |||||||||| |||||||||| ||||  |||||||||||||| |  ||| ||||||||||||||||| ||||    
T  42291532 ggtggacgactaatccggctcgtgcgtagaggcatgtgcactggccaagcgttgttcaccctgggaatcaaacccggtattctccgg 42291618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 133
Target Start/End: Original strand, 7308391 - 7308512
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    |||| |||| |||| |||||| ||| |||||||||| ||||   |||||||||||||||  ||| |||| |||||| |||||| |  |||| ||||||||    
T  7308391 ggtgagcgactaatccggctcatgcgtagaggcatgtgcactgcccaagcgttgttccccctgggaatcgaacccgatattcctcaaatacgtccttgga 7308490  T
Q  112 atgagcatcttgccactggaac 133  Q
    ||||||  ||||||||| ||||    
T  7308491 atgagctccttgccactagaac 7308512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 93
Target Start/End: Complemental strand, 9805084 - 9805003
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattc 93  Q
    ||||| ||| |||| |||||| ||| |||||||||||||||  ||||||||||||||||  ||| |||| ||||||||||||    
T  9805084 ggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaacccggtattc 9805003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 85
Target Start/End: Original strand, 24463913 - 24463986
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacc 85  Q
    ||||||||| |||| ||||||||||||||||||||||||||  ||||| |||||||| | ||| ||||| ||||    
T  24463913 ggtgggcgactaatccggctcgtgcatagaggcatgcgcactggccaatcgttgttcgccttgaaaatcgaacc 24463986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 128
Target Start/End: Complemental strand, 8513583 - 8513483
Alignment:
Q  28 ggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatcttgccac 127  Q
    ||||||||| |||||||||| ||||  ||||||| ||||| ||  | | |||| ||||||||||||||||| ||| ||||||||| ||||  ||||||||    
T  8513583 ggctcgtgcgtagaggcatgtgcactggccaagcattgtttcccctaggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccac 8513484  T
Q  128 t 128  Q
    |    
T  8513483 t 8513483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 80
Target Start/End: Complemental strand, 32874871 - 32874799
Alignment:
Q  8 caatggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatc 80  Q
    ||||||||| ||| ||||||||||||||| || ||| |||||||| || |||||||||||||| ||| |||||    
T  32874871 caatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactagtcaagcgttgttccccttgaaaatc 32874799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 12705094 - 12704975
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||||||| |||| ||| || ||| |||| |||||| |||  | |||||||||||||   | | |||| ||||||||||||||||| ||| ||||||||    
T  12705094 ggtgggcgactaatccggttcatgcgtagaagcatgcacactggtcaagcgttgttcctcctcggaatcgaacccggtattccccgggtacgtccttgga 12704995  T
Q  112 atgagcatcttgccactgga 131  Q
    | ||||  ||||||||||||    
T  12704994 aggagctccttgccactgga 12704975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 17 - 128
Target Start/End: Complemental strand, 30995196 - 30995085
Alignment:
Q  17 gcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgag 116  Q
    |||| |||| |||||||||| ||||||||||||| |  |||||| |||||||||  ||| |||| |||| ||||||||||   ||| ||||||||| |||    
T  30995196 gcgactaatccggctcgtgcgtagaggcatgcgccctggccaagtgttgttccccctgggaatcgaacctggtattccccatgtacgtccttggaaggag 30995097  T
Q  117 catcttgccact 128  Q
    |  |||||||||    
T  30995096 ctccttgccact 30995085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 37263320 - 37263202
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||| ||| |||| |||||||||| ||||||||||||||   ||||||||||||||||  ||  |||| |||||| |||||||||| ||| ||||| ||    
T  37263320 ggtggacgactaatccggctcgtgcgtagaggcatgcgcattggccaagcgttgttccc-ctgagaatcgaacccgatattccccgggtacgtccttaga 37263222  T
Q  112 atgagcatcttgccactgga 131  Q
    | || |  ||||||||||||    
T  37263221 aggaactccttgccactgga 37263202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 39728467 - 39728348
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    |||| |||| ||||||| |||| || ||||||||||| |||  |||||| |||||| ||| ||  |||| |||| |||||||||||| ||| | ||||||    
T  39728467 ggtgagcgactaattcgactcgagcgtagaggcatgcacactggccaagtgttgtttcctctgataatcgaacctggtattccccgggtacgttcttgga 39728368  T
Q  112 atgagcatcttgccactgga 131  Q
    | ||||  ||||||||||||    
T  39728367 aagagctccttgccactgga 39728348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 18262645 - 18262731
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccgg 98  Q
    ||||||||| |||| |||||||||  |||||| ||||||||  | ||||||||||||||  || ||||  |||||||||||||||||    
T  18262645 ggtgggcgactaatccggctcgtgtgtagaggtatgcgcactggtcaagcgttgttccccctgaaaatagaacccggtattccccgg 18262731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 112
Target Start/End: Complemental strand, 20692991 - 20692913
Alignment:
Q  34 tgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaa 112  Q
    |||| ||||||||| | ||  ||||||||||||| ||| | | |||||||||||||||||||||| ||| |||||||||    
T  20692991 tgcacagaggcatgtgtactggccaagcgttgtttcctctaggaatcaaacccggtattccccgggtacgtccttggaa 20692913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 131
Target Start/End: Complemental strand, 2485250 - 2485158
Alignment:
Q  38 tagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatcttgccactgga 131  Q
    |||||||||||||||| ||| || ||||||||| | |||| || ||||| |||||||| | |||| ||||||||||||||  ||||||| ||||    
T  2485250 tagaggcatgcgcacaggcccagggttgttcccctaggaa-tcgaacccagtattccctgaatacgtccttggaatgagctccttgccattgga 2485158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 131
Target Start/End: Original strand, 18136333 - 18136426
Alignment:
Q  38 tagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatcttgccactgga 131  Q
    ||||||||||| |||   ||||| |||||||||  ||| |||| |||||||||||| |||||||| || |||||| ||||  ||||||||||||    
T  18136333 tagaggcatgcacactgaccaagtgttgttccccctgggaatcgaacccggtattctccggatacgtctttggaaggagctccttgccactgga 18136426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 22 - 102
Target Start/End: Complemental strand, 40117485 - 40117405
Alignment:
Q  22 taattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatac 102  Q
    |||| |||||| ||| |||||||||||||||  ||||||||||||||||  |||||||| ||  || ||||||||| ||||    
T  40117485 taatccggctcatgcgtagaggcatgcgcactggccaagcgttgttccccctggaaatcgaattcgatattccccgaatac 40117405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 127
Target Start/End: Complemental strand, 13664324 - 13664225
Alignment:
Q  28 ggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatcttgccac 127  Q
    ||||| ||| |||||||||||||||  |||||| |||||||||  ||  |||| || |||||||||||  ||||| ||||||||| ||||  ||||||||    
T  13664324 ggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgataatcgaatccggtattccctagatacgtccttggaaggagctccttgccac 13664225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 41163487 - 41163605
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||| ||| |||| | |||| ||| ||||| |||| ||||  ||||| |||||||||| | |||| || ||||||||||||||||| ||| | ||||||    
T  41163487 ggtggacgactaatccagctcatgcgtagagacatgtgcactggccaaacgttgttcccctgggaa-tcgaacccggtattccccgggtacgttcttgga 41163585  T
Q  112 atgagcatcttgccactgga 131  Q
    | ||||  ||||||||||||    
T  41163586 aggagctccttgccactgga 41163605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 12 - 117
Target Start/End: Original strand, 3653941 - 3654044
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||| ||| |||| || ||||||| |||||||||||||||  | |||||||||||  || | | |||| |||||||||||| |||| ||| ||||||||    
T  3653941 ggtggacgactaatccgcctcgtgcgtagaggcatgcgcactggtcaagcgttgtt--ctctaggaatcgaacccggtattctccgggtacgtccttgga 3654038  T
Q  112 atgagc 117  Q
    | ||||    
T  3654039 aagagc 3654044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 131
Target Start/End: Original strand, 6767143 - 6767197
Alignment:
Q  77 aatcaaacccggtattccccggatacatccttggaatgagcatcttgccactgga 131  Q
    |||| ||||||||||||||||| ||| ||||||||| ||||  ||||||||||||    
T  6767143 aatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactgga 6767197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 108
Target Start/End: Complemental strand, 7336690 - 7336604
Alignment:
Q  22 taattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatcctt 108  Q
    |||| |||||||||| |||||||||||||||     ||||||||||| | || |||||| |||||| |||||| ||||||| |||||    
T  7336690 taatccggctcgtgcgtagaggcatgcgcactgataaagcgttgttctccttagaaatcgaacccgatattcctcggatacgtcctt 7336604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 12 - 94
Target Start/End: Complemental strand, 23383737 - 23383655
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattcc 94  Q
    ||||| ||| |||| | |||| ||| |||||||| ||||||  ||||||||||||||||  ||| |||| |||||||||||||    
T  23383737 ggtggacgactaatccagctcatgcgtagaggcaagcgcactggccaagcgttgttccccctgggaatcgaacccggtattcc 23383655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 127
Target Start/End: Original strand, 35813090 - 35813140
Alignment:
Q  77 aatcaaacccggtattccccggatacatccttggaatgagcatcttgccac 127  Q
    |||| ||||||||||||| ||| ||| |||||||||||||| |||||||||    
T  35813090 aatcgaacccggtattcctcgggtacgtccttggaatgagcttcttgccac 35813140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 109
Target Start/End: Original strand, 14588644 - 14588741
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttg 109  Q
    ||||| ||| |||| |||||| ||| |||||||||||||||  | |||||||| ||||   || ||||| |||||| |||||||| ||||| ||||||    
T  14588644 ggtggacgactaatccggctcatgcgtagaggcatgcgcactggtcaagcgttattcctcctgaaaatcgaacccgatattccccagatacgtccttg 14588741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 131
Target Start/End: Original strand, 35561871 - 35561964
Alignment:
Q  38 tagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatcttgccactgga 131  Q
    |||||||||||||||  | || | |||||||||| ||||| || ||| || |||||||||||||| || |||||| ||||   |||||||||||    
T  35561871 tagaggcatgcgcactggtcaggtgttgttccctctggaagtcgaactcgatattccccggatacgtcattggaaggagctctttgccactgga 35561964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 8e-23; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 16 - 131
Target Start/End: Complemental strand, 10855459 - 10855344
Alignment:
Q  16 ggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatga 115  Q
    ||||| |||||||| |||||| |||||||||||| ||  ||||||||||||||||  |||||||||||||||||||| |||   ||||||||||||| ||    
T  10855459 ggcgactaattcggttcgtgcgtagaggcatgcgtactggccaagcgttgttccccctggaaatcaaacccggtatttcccaagtacatccttggaagga 10855360  T
Q  116 gcatcttgccactgga 131  Q
    ||  ||||||||||||    
T  10855359 gctccttgccactgga 10855344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 13894005 - 13893886
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||||||| |||| |||||||||  ||||||||||||||    |||||||||||||||  |||||||| |||||||||||||||||| || ||||||||    
T  13894005 ggtgggcgactaatccggctcgtgtgtagaggcatgcgcattgaccaagcgttgttccccctggaaatccaacccggtattccccggacacgtccttgga 13893906  T
Q  112 atgagcatcttgccactgga 131  Q
    | ||||  ||||||||||||    
T  13893905 aggagctccttgccactgga 13893886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 8 - 131
Target Start/End: Complemental strand, 25295043 - 25294920
Alignment:
Q  8 caatggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatcct 107  Q
    ||||||||| ||| |||| |||||| |||||||||||||||||||  |||||| |||||| ||   |  |||||||||||||||||||||||||| ||||    
T  25295043 caatggtggacgactaatccggctcatgcatagaggcatgcgcactggccaagtgttgtttccccagagaatcaaacccggtattccccggatacgtcct 25294944  T
Q  108 tggaatgagcatcttgccactgga 131  Q
    ||||| ||||  ||||||||||||    
T  25294943 tggaaggagctccttgccactgga 25294920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 12 - 117
Target Start/End: Complemental strand, 47219223 - 47219118
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||| ||| |||| |||||| ||| ||||||||||||||| |||||||||||||| || |||| |||| |||| |||||||||||||||| ||||||||    
T  47219223 ggtggacgactaatccggctcatgcgtagaggcatgcgcactagccaagcgttgtttcccttgggaatcgaacctggtattccccggatacgtccttgga 47219124  T
Q  112 atgagc 117  Q
    | ||||    
T  47219123 aagagc 47219118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 12 - 112
Target Start/End: Original strand, 47749133 - 47749232
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||||||| ||||||||||||||| |||||||||||||||  |||||| ||||||||| | || |||| |||||||||||||| |||||| ||||||||    
T  47749133 ggtgggcgactaattcggctcgtgcgtagaggcatgcgcactggccaagagttgttcccctagg-aatcgaacccggtattccctggatacgtccttgga 47749231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 30767275 - 30767394
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||||||| |||| |||||||||| ||||||||||| |||  |||||| |||||||||  |||||||| |||||| |||||||| | ||||||||||||    
T  30767275 ggtgggcgactaatccggctcgtgcgtagaggcatgcacactggccaagtgttgttccccctggaaatcgaacccgatattccccaggtacatccttgga 30767374  T
Q  112 atgagcatcttgccactgga 131  Q
    | || |  ||||||||||||    
T  30767375 aggaactccttgccactgga 30767394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 22 - 131
Target Start/End: Original strand, 26207839 - 26207948
Alignment:
Q  22 taattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatct 121  Q
    |||| |||||| ||| ||||||||||| |||  | ||||||||||||||  ||| |||| ||||||||||||||||| ||||||||||||| ||||  ||    
T  26207839 taatccggctcatgcgtagaggcatgcacactggacaagcgttgttccccgtgggaatcgaacccggtattccccgggtacatccttggaaggagctcct 26207938  T
Q  122 tgccactgga 131  Q
    ||||||||||    
T  26207939 tgccactgga 26207948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 42412801 - 42412921
Alignment:
Q  11 tggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgg 110  Q
    ||||| |||| |||| |||||| ||| |||||||||| ||||  ||||||||||||||||   || |||| ||||||||||||||||||||| |||||||    
T  42412801 tggtgagcgactaatccggctcatgcgtagaggcatgggcacttgccaagcgttgttccccccgggaatcgaacccggtattccccggatacgtccttgg 42412900  T
Q  111 aatgagcatcttgccactgga 131  Q
    || ||||  ||||||| ||||    
T  42412901 aaggagctccttgccattgga 42412921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 15320265 - 15320146
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||||||| |||| |||||||||| ||||||||||| |||  ||||| | |||||||   | |||||| ||||||||||||||||| ||| ||||||||    
T  15320265 ggtgggcgactaatccggctcgtgcgtagaggcatgcacactggccaatcattgttcctcctcgaaatcgaacccggtattccccgggtacgtccttgga 15320166  T
Q  112 atgagcatcttgccactgga 131  Q
    | ||||  ||||||||||||    
T  15320165 aggagctccttgccactgga 15320146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 8 - 131
Target Start/End: Complemental strand, 29135996 - 29135873
Alignment:
Q  8 caatggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatcct 107  Q
    |||||||||  || |||| |||||| ||| |||||||||||||||  |||||| |||||||||  ||| |||| || |||||||||||||||||| ||||    
T  29135996 caatggtggaagactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaatccggtattccccggatacgtcct 29135897  T
Q  108 tggaatgagcatcttgccactgga 131  Q
    |||||  |||  ||||||||||||    
T  29135896 tggaagaagctccttgccactgga 29135873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 8 - 131
Target Start/End: Complemental strand, 45877537 - 45877414
Alignment:
Q  8 caatggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatcct 107  Q
    ||||||||  ||| |||| |||||| ||| |||||||||| ||||  |||||| |||||| ||  |||||||| ||||||||||||||||||||| ||||    
T  45877537 caatggtgaacgactaatccggctcatgcgtagaggcatgtgcactggccaagtgttgtttcccctggaaatcgaacccggtattccccggatacgtcct 45877438  T
Q  108 tggaatgagcatcttgccactgga 131  Q
    ||||| | ||  ||||||||||||    
T  45877437 tggaaggggctccttgccactgga 45877414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 11 - 117
Target Start/End: Original strand, 15795521 - 15795626
Alignment:
Q  11 tggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgg 110  Q
    |||||||||| |||||| |||||||| |||||||||||||||   |||||||||||||||  ||| |||| ||| ||||||||||||| ||| |||||||    
T  15795521 tggtgggcgactaattcagctcgtgcgtagaggcatgcgcactgaccaagcgttgttccc-ctgggaatcgaactcggtattccccgggtacgtccttgg 15795619  T
Q  111 aatgagc 117  Q
    || ||||    
T  15795620 aaggagc 15795626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 8 - 112
Target Start/End: Complemental strand, 49198434 - 49198330
Alignment:
Q  8 caatggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatcct 107  Q
    ||||||||| ||| |||| |||||| ||| |||||||||||||||  |||||| |||||||||  | | |||| ||||||||||||||||||||  ||||    
T  49198434 caatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctaggaatcgaacccggtattccccggatatgtcct 49198335  T
Q  108 tggaa 112  Q
    |||||    
T  49198334 tggaa 49198330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 12 - 128
Target Start/End: Complemental strand, 49543598 - 49543482
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||||||| ||||||||||||||| ||||||||||| |||   |||| ||||||||||  ||  |||| |||||| ||||||| |||||| ||||||||    
T  49543598 ggtgggcgactaattcggctcgtgcgtagaggcatgcacactgaccaaacgttgttccccatgagaatcgaacccgatattcccgggatacgtccttgga 49543499  T
Q  112 atgagcatcttgccact 128  Q
    | ||||  |||||||||    
T  49543498 aggagctccttgccact 49543482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 51682981 - 51683101
Alignment:
Q  11 tggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgg 110  Q
    |||||||||| |||| |||||||||   ||||||||||||||  | ||||||||||||||  ||| |||| |||| |||||||||||||||| || ||||    
T  51682981 tggtgggcgactaatccggctcgtgtggagaggcatgcgcactggtcaagcgttgttccccctgggaatcgaacctggtattccccggatacgtctttgg 51683080  T
Q  111 aatgagcatcttgccactgga 131  Q
    || ||||  || |||||||||    
T  51683081 aaggagctcctcgccactgga 51683101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 3507561 - 3507644
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccc 95  Q
    |||| |||| |||| |||||||||| |||||||||||||||  |||||| |||||||||| | | |||||||||||||||||||    
T  3507561 ggtgagcgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttccctctaggaatcaaacccggtattccc 3507644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 29127998 - 29127879
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||||||| |||| |||||| ||| |||||||||||||||   ||||| ||||||| |  |||||||| |||||| |||||||| ||||| ||||||||    
T  29127998 ggtgggcgactaatccggctcatgcgtagaggcatgcgcactgaccaagtgttgttctccctggaaatcgaacccgatattccccagatacgtccttgga 29127899  T
Q  112 atgagcatcttgccactgga 131  Q
    | || |  ||||||||||||    
T  29127898 aggatctccttgccactgga 29127879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 131
Target Start/End: Original strand, 29762179 - 29762302
Alignment:
Q  8 caatggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatcct 107  Q
    ||||||||| ||| |||| | |||| |||||||||||||||||||  |||||| |||||| ||  ||  ||||  ||||| ||||||||| |||||||||    
T  29762179 caatggtggacgactaatccagctcatgcatagaggcatgcgcactggccaagtgttgttgcccctgagaatcggacccgatattccccgaatacatcct 29762278  T
Q  108 tggaatgagcatcttgccactgga 131  Q
    ||||| ||||  ||||||||||||    
T  29762279 tggaaggagctccttgccactgga 29762302  T

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Target: chr3; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 131
Target Start/End: Original strand, 45402389 - 45402495
Alignment:
Q  22 taattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatct 121  Q
    |||| |||||| ||| |||||||||||||||| ||| || |||||||||| | | |||| |||||| |||||||||| |||||||   |||||||| |||    
T  45402389 taatccggctcatgcgtagaggcatgcgcacaggccgagtgttgttccctctaggaatcgaacccgatattccccgggtacatcc---gaatgagcttct 45402485  T
Q  122 tgccactgga 131  Q
    ||||||||||    
T  45402486 tgccactgga 45402495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 6462481 - 6462375
Alignment:
Q  22 taattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatct 121  Q
    |||| |||||| ||| |||||||||||||||  |||||||||||||| |  ||  |||| ||||||||||||||| ||||| ||||||||| ||||  ||    
T  6462481 taatccggctcatgcgtagaggcatgcgcactggccaagcgttgttctccctgtgaatcgaacccggtattccccagatacgtccttggaaggagctcct 6462382  T
Q  122 tgccact 128  Q
    |||||||    
T  6462381 tgccact 6462375  T

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Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 38 - 131
Target Start/End: Original strand, 11687163 - 11687256
Alignment:
Q  38 tagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatcttgccactgga 131  Q
    |||||||||||||||  ||||||| ||||||||  ||  ||||||||||||||||| || | ||| ||||||||| |||| |||||||||||||    
T  11687163 tagaggcatgcgcactggccaagcattgttccccctgagaatcaaacccggtattctccaggtacgtccttggaaggagcttcttgccactgga 11687256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 38 - 131
Target Start/End: Complemental strand, 48342073 - 48341980
Alignment:
Q  38 tagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatcttgccactgga 131  Q
    ||||||||||||||| |||||||||||||||||  | | |||  ||||||||||||||| | ||| ||||||||| ||||  ||||||||||||    
T  48342073 tagaggcatgcgcactagccaagcgttgttccccctaggaatagaacccggtattccccaggtacgtccttggaaggagctccttgccactgga 48341980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 131
Target Start/End: Complemental strand, 54261295 - 54261186
Alignment:
Q  22 taattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatct 121  Q
    |||| |||||| ||| |||||||||||||||  |||||||||||||||   | | |||| ||||||||||||||| | ||| ||||||||| ||||  ||    
T  54261295 taatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctaggaatcgaacccggtattccccaggtacgtccttggaaggagctcct 54261196  T
Q  122 tgccactgga 131  Q
    ||||||||||    
T  54261195 tgccactgga 54261186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 12 - 96
Target Start/End: Complemental strand, 8164632 - 8164548
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattcccc 96  Q
    ||||||||| |||| || ||||||| || ||||||||||||  |||||||||||||||| || |||||  |||||||||||||||    
T  8164632 ggtgggcgactaatccgactcgtgcgtaaaggcatgcgcactggccaagcgttgttccccttagaaattgaacccggtattcccc 8164548  T

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Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 10040620 - 10040517
Alignment:
Q  27 cggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatcttgcca 126  Q
    |||||||||| |||||||||||||||  ||||||||||||||||  ||  |||| |||||| |||||||||| ||| ||||| ||| ||||  |||||||    
T  10040620 cggctcgtgcgtagaggcatgcgcactggccaagcgttgttccc-ctgagaatcgaacccgatattccccgggtacgtccttagaaggagctccttgcca 10040522  T
Q  127 ctgga 131  Q
    |||||    
T  10040521 ctgga 10040517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 29 - 117
Target Start/End: Original strand, 52364845 - 52364933
Alignment:
Q  29 gctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagc 117  Q
    |||||||| |||||||||||||||  | ||||||||||||| | ||| |||| ||| ||||||||||||| ||| ||||||||| ||||    
T  52364845 gctcgtgcgtagaggcatgcgcactggtcaagcgttgttccttctgggaatcgaactcggtattccccgggtacgtccttggaaggagc 52364933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 35316034 - 35315916
Alignment:
Q  13 gtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaa 112  Q
    |||||||| |||| | |||| ||| |||||||||||||||  |||||| |||||||||  ||| |||| |||||| ||||| |||| ||| |||||||||    
T  35316034 gtgggcgactaatccagctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccgatattctccgggtacgtccttggaa 35315935  T
Q  113 tgagcatcttgccactgga 131  Q
     ||||   |||||||||||    
T  35315934 ggagctctttgccactgga 35315916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 133
Target Start/End: Complemental strand, 7650306 - 7650185
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||||||| |||| |||||||||| ||||| ||| || ||  |||||| |||||||||  |||||||| ||||||||||||||    |||||||||| |    
T  7650306 ggtgggcgactaatccggctcgtgcgtagagacattcgtactggccaagtgttgttccccctggaaatcgaacccggtattccctaagtacatccttgaa 7650207  T
Q  112 atgagcatcttgccactggaac 133  Q
    | || |  ||||||||||||||    
T  7650206 aggaactccttgccactggaac 7650185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 117
Target Start/End: Complemental strand, 47471910 - 47471806
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||| ||| ||||||||||| ||| |||| |||||||||| |||||||| ||||||||  ||| |||| ||||||||||||||  | ||| ||||||||    
T  47471910 ggtggacgactaattcggctcatgcgtagaagcatgcgcactagccaagcattgttccc-ctgggaatcgaacccggtattccctaggtacgtccttgga 47471812  T
Q  112 atgagc 117  Q
    | ||||    
T  47471811 aggagc 47471806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 109
Target Start/End: Original strand, 55069707 - 55069804
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttg 109  Q
    |||| |||| |||| |||||||||| |||||||||| ||||  ||||| ||||||||||| | | |||||||||| |||||||| | |||| ||||||    
T  55069707 ggtgagcgattaatccggctcgtgcgtagaggcatgtgcactggccaaacgttgttccctataggaatcaaacccagtattccctgaatacgtccttg 55069804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 112
Target Start/End: Complemental strand, 7328922 - 7328823
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||||||| |||| |||||| ||| || ||||||||||||  |||||| |||||||||  ||| |||| ||||||||||| ||||| ||| ||||||||    
T  7328922 ggtgggcgactaatccggctcatgcgta-aggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtatttcccgggtacgtccttgga 7328824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 129
Target Start/End: Original strand, 7612987 - 7613071
Alignment:
Q  45 atgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatcttgccactg 129  Q
    |||||||| |||||||||||||||||  ||| |||| |||||||||||||||   ||| ||||||||| ||||  ||||||||||    
T  7612987 atgcgcactagccaagcgttgttccccctgggaatcgaacccggtattccccaagtacgtccttggaaggagctccttgccactg 7613071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 28572239 - 28572358
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||||||| |||| |||||||||| |||||||||||  ||  ||||||||||||| ||  ||| |||| ||||| ||||||||||| | | | |||| |    
T  28572239 ggtgggcgactaatccggctcgtgcgtagaggcatgcatactggccaagcgttgtttcccctgggaatcgaacccagtattccccgggtgcgttcttgaa 28572338  T
Q  112 atgagcatcttgccactgga 131  Q
    | ||||  ||||||||||||    
T  28572339 aggagctccttgccactgga 28572358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 41630540 - 41630659
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||||||| |||| |||||| ||  |||||||||||||||  | |||||||||||||| |||| |||  |||||||||||  |||| ||| ||| ||||    
T  41630540 ggtgggcgactaatccggctcatgtgtagaggcatgcgcactgggcaagcgttgttccccttgggaattgaacccggtattttccggttacgtccatgga 41630639  T
Q  112 atgagcatcttgccactgga 131  Q
    | ||||  |||| |||||||    
T  41630640 aggagctccttgtcactgga 41630659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 8 - 131
Target Start/End: Original strand, 51060305 - 51060428
Alignment:
Q  8 caatggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatcct 107  Q
    ||||||||| ||| |||| | | || ||| |||||||||||||||   ||||| |||||||||  ||  |||| |||||| ||||||||||||| |||||    
T  51060305 caatggtggacgactaatccagttcatgcgtagaggcatgcgcactgaccaagtgttgttccccctgagaatcgaacccgatattccccggatagatcct 51060404  T
Q  108 tggaatgagcatcttgccactgga 131  Q
    ||||| ||||   |||||||||||    
T  51060405 tggaaggagctatttgccactgga 51060428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 39849149 - 39849032
Alignment:
Q  13 gtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaa 112  Q
    |||||||| |||| |||||| ||| ||||||||||| |||  ||||||||||||| ||| ||| |||| ||||||  |||||| |  ||| |||||||||    
T  39849149 gtgggcgactaatccggctcatgcgtagaggcatgcacactggccaagcgttgtt-cctctgggaatcgaacccgaaattccctgagtacgtccttggaa 39849051  T
Q  113 tgagcatcttgccactgga 131  Q
     ||||  ||||||||||||    
T  39849050 ggagctccttgccactgga 39849032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 131
Target Start/End: Original strand, 45450501 - 45450591
Alignment:
Q  38 tagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatcttgccactgga 131  Q
    |||||||||||||||  | ||||| |||||||| | ||||||||||||| ||||||  ||||||| | |||||||||||| |||||||||||||    
T  45450501 tagaggcatgcgcactggtcaagcattgttcccct-ggaaatcaaacccagtattctacggatacgt-cttggaatgagc-tcttgccactgga 45450591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 38 - 102
Target Start/End: Original strand, 13167497 - 13167561
Alignment:
Q  38 tagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatac 102  Q
    |||||||||| ||||  ||||||||||||||| ||||| |||| |||||| |||||||| |||||    
T  13167497 tagaggcatgtgcactggccaagcgttgttccttttgggaatcgaacccgatattccccagatac 13167561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 31 - 131
Target Start/End: Complemental strand, 31072938 - 31072838
Alignment:
Q  31 tcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatcttgccactgg 130  Q
    |||||| |||||||||| ||||   |||||||||||||||  |||||||| |||| ||||||| |||| ||| |||||| || ||||  ||||||| |||    
T  31072938 tcgtgcgtagaggcatgtgcactgaccaagcgttgttccccctggaaatcgaacctggtattctccgggtacgtccttgaaaggagctccttgccattgg 31072839  T
Q  131 a 131  Q
    |    
T  31072838 a 31072838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 13 - 117
Target Start/End: Complemental strand, 33251740 - 33251636
Alignment:
Q  13 gtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaa 112  Q
    |||| ||| |||| |||||| ||| ||||||||||| |||  ||||| ||||||||||   || |||| |||||||||||||||  |||| |||||||||    
T  33251740 gtggacgactaatccggctcatgcgtagaggcatgcacactggccaaacgttgttcccaccgggaatcgaacccggtattcccctaatacgtccttggaa 33251641  T
Q  113 tgagc 117  Q
     ||||    
T  33251640 ggagc 33251636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 127
Target Start/End: Original strand, 3136722 - 3136836
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||| ||| |||| || ||| ||| |||||||||||||||   ||||| ||||||||| | | ||||| || |||||||||||||| ||| |||||| |    
T  3136722 ggtggacgactaatccgactcatgcgtagaggcatgcgcactgcccaagtgttgttcccct-gaaaatcgaatccggtattccccgggtacgtccttgaa 3136820  T
Q  112 atgagcatcttgccac 127  Q
    | |||| |||||||||    
T  3136821 aggagcttcttgccac 3136836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 129
Target Start/End: Complemental strand, 33560873 - 33560822
Alignment:
Q  78 atcaaacccggtattccccggatacatccttggaatgagcatcttgccactg 129  Q
    ||||||||||||||||||| | ||||||||||||| ||||  ||||||||||    
T  33560873 atcaaacccggtattccccaggtacatccttggaaggagctccttgccactg 33560822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 117
Target Start/End: Original strand, 35923661 - 35923756
Alignment:
Q  22 taattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagc 117  Q
    ||||||| ||||||| |||||||||||||||  ||||| ||||||||||  |   |||| |||| ||||||| || | ||| ||||||||||||||    
T  35923661 taattcgactcgtgcttagaggcatgcgcactggccaaacgttgttccccctatgaatcgaacctggtattctccaggtacgtccttggaatgagc 35923756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 131
Target Start/End: Original strand, 37092565 - 37092652
Alignment:
Q  44 catgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatcttgccactgga 131  Q
    |||||||||  ||||| |||||||||| ||||||||| || ||| |||||| ||| ||| |||||||||  |||  ||||||||||||    
T  37092565 catgcgcactggccaaacgttgttccccttggaaatctaatccgatattccacgggtacgtccttggaagaagctccttgccactgga 37092652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 67
Target Start/End: Original strand, 50405627 - 50405686
Alignment:
Q  8 caatggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgtt 67  Q
    ||||||||||||| |||| || ||||||| |||||||||||||||  | |||||||||||    
T  50405627 caatggtgggcgactaatccgactcgtgcgtagaggcatgcgcactggtcaagcgttgtt 50405686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 12 - 94
Target Start/End: Original strand, 26361995 - 26362077
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattcc 94  Q
    |||| |||| |||| |||||||||| ||||||||||| |||   |||| |||||||||| |||| ||||||||| | ||||||    
T  26361995 ggtgtgcgactaatccggctcgtgcgtagaggcatgcacactgaccaaacgttgttccccttgggaatcaaacctgatattcc 26362077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 30045882 - 30045816
Alignment:
Q  30 ctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattcccc 96  Q
    ||||||| ||||| |||||||||  ||||||||||||||||  | | |||| |||||||||||||||    
T  30045882 ctcgtgcgtagagacatgcgcactggccaagcgttgttccccctaggaatcgaacccggtattcccc 30045816  T

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Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 94
Target Start/End: Original strand, 7310736 - 7310813
Alignment:
Q  17 gcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattcc 94  Q
    |||| |||| |||||||||| ||||||||||| |||  | |||| |||||||||  ||| |||| |||||||||||||    
T  7310736 gcgactaatccggctcgtgcgtagaggcatgcacaccgggcaagtgttgttcccactgggaatcgaacccggtattcc 7310813  T

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Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 131
Target Start/End: Complemental strand, 49082877 - 49082784
Alignment:
Q  38 tagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatcttgccactgga 131  Q
    |||| ||||||||||  || ||||||||||| |  ||| |||| ||| ||||||||||||||||| ||||| ||| ||||  | ||||||||||    
T  49082877 tagatgcatgcgcactggctaagcgttgttctccctgggaatcgaactcggtattccccggatacgtccttagaaggagctccctgccactgga 49082784  T

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Target: chr1 (Bit Score: 56; Significance: 8e-23; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 43959849 - 43959968
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||||||| |||| |||||||||| |||||||||||||||  ||||||||||||||||  ||| |||  |||||| |||||||||| ||| || |||||    
T  43959849 ggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctgggaattgaacccgatattccccgggtacgtcattgga 43959948  T
Q  112 atgagcatcttgccactgga 131  Q
    | ||||| ||||||||||||    
T  43959949 aggagcaccttgccactgga 43959968  T

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Target: chr1; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 22 - 131
Target Start/End: Original strand, 48798108 - 48798217
Alignment:
Q  22 taattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatct 121  Q
    |||| |||||| ||| ||||||||||||||| || ||||||||||||||  |||||||| |||||| |||||||||||||| || |||||| ||||  ||    
T  48798108 taatccggctcatgcgtagaggcatgcgcactagtcaagcgttgttccccctggaaatcgaacccgatattccccggatacgtcattggaaggagctcct 48798207  T
Q  122 tgccactgga 131  Q
    ||||||||||    
T  48798208 tgccactgga 48798217  T

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Target: chr1; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 8 - 129
Target Start/End: Complemental strand, 18915951 - 18915830
Alignment:
Q  8 caatggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatcct 107  Q
    |||||||| |||| |||| |||||||||| ||||||||||| |||  |||||| |||||||||  ||| |||| ||||||||||||||||| ||| ||||    
T  18915951 caatggtgagcgactaatccggctcgtgcgtagaggcatgcacactggccaagtgttgttccccctgggaatcgaacccggtattccccgggtacgtcct 18915852  T
Q  108 tggaatgagcatcttgccactg 129  Q
    |||||  |||  ||||||||||    
T  18915851 tggaagaagctccttgccactg 18915830  T

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Target: chr1; HSP #4
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 10172999 - 10173118
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||||||| |||| |||||| ||| |||||||||| ||||  ||||||||||||||  | ||| |||  || |||||||||||| ||||| ||||||||    
T  10172999 ggtgggcgagtaatccggctcatgcgtagaggcatgggcactggccaagcgttgttctttatgggaattgaatccggtattccccagatacgtccttgga 10173098  T
Q  112 atgagcatcttgccactgga 131  Q
    | ||||| ||||||||||||    
T  10173099 aggagcaccttgccactgga 10173118  T

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Target: chr1; HSP #5
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 8 - 131
Target Start/End: Original strand, 41663880 - 41664003
Alignment:
Q  8 caatggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatcct 107  Q
    ||||||||| ||| |||| | |||| ||| |||||||||||||||   ||||| |||||||||  ||| |||| ||||||||||||||||||||| ||||    
T  41663880 caatggtggacgactaatccagctcatgcgtagaggcatgcgcactgaccaagtgttgttccccctgggaatcgaacccggtattccccggatacgtcct 41663979  T
Q  108 tggaatgagcatcttgccactgga 131  Q
    | ||| ||||  ||||||||||||    
T  41663980 tagaaggagctccttgccactgga 41664003  T

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Target: chr1; HSP #6
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 8 - 131
Target Start/End: Complemental strand, 49078198 - 49078075
Alignment:
Q  8 caatggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatcct 107  Q
    ||||||||  ||| |||| |||||| ||| |||||||||||||||  |||||| |||||| ||  ||| |||| ||||||||||||||||||||| ||||    
T  49078198 caatggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgtttcccctgggaatcgaacccggtattccccggatacgtcct 49078099  T
Q  108 tggaatgagcatcttgccactgga 131  Q
    | ||| ||||  ||||||||||||    
T  49078098 tagaaggagctccttgccactgga 49078075  T

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Target: chr1; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 11 - 117
Target Start/End: Original strand, 33004042 - 33004148
Alignment:
Q  11 tggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgg 110  Q
    ||||||| || |||| |||||||||| |||||||||||||||  ||||||| ||||| ||  |||||||| || ||| |||||||||||||| |||||||    
T  33004042 tggtgggtgactaatccggctcgtgcgtagaggcatgcgcactggccaagcattgtttcccctggaaatcgaatccgatattccccggatacgtccttgg 33004141  T
Q  111 aatgagc 117  Q
    || ||||    
T  33004142 aaggagc 33004148  T

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Target: chr1; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 42 - 128
Target Start/End: Original strand, 34334353 - 34334439
Alignment:
Q  42 ggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatcttgccact 128  Q
    |||||||||||  |||||| |||||||||  ||| |||| ||||||||||||||||||||| ||||||||||||||  |||||||||    
T  34334353 ggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccggatacgtccttggaatgagctccttgccact 34334439  T

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Target: chr1; HSP #9
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 38 - 131
Target Start/End: Complemental strand, 5855576 - 5855483
Alignment:
Q  38 tagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatcttgccactgga 131  Q
    |||||||||||||||  |||||||||||||||   ||| |||| |||||||||||||||| |||| ||||||||| ||||  ||||||||||||    
T  5855576 tagaggcatgcgcactggccaagcgttgttcctcctgggaatcgaacccggtattccccgaatacgtccttggaaggagctccttgccactgga 5855483  T

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Target: chr1; HSP #10
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 12 - 133
Target Start/End: Complemental strand, 10336596 - 10336475
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||| ||| |||| |||||| ||| |||||||||||||||  | ||||||||||||||  || ||||| |||||| ||||| |||||||| || |||||    
T  10336596 ggtggacgattaatccggctcatgcgtagaggcatgcgcactggtcaagcgttgttccccctgaaaatcgaacccgatattctccggatacgtctttgga 10336497  T
Q  112 atgagcatcttgccactggaac 133  Q
    | ||||  ||||||||||||||    
T  10336496 aggagctccttgccactggaac 10336475  T

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Target: chr1; HSP #11
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 12 - 112
Target Start/End: Complemental strand, 37339900 - 37339799
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgt-tccctttggaaatcaaacccggtattccccggatacatccttgg 110  Q
    ||||||||| |||| |||||||||| | |||||||||||||  ||||||||||||  |||  ||| |||| ||||||||||||||||| |||||||||||    
T  37339900 ggtgggcgactaatccggctcgtgcgttgaggcatgcgcactggccaagcgttgtccccccctgggaatcgaacccggtattccccgggtacatccttgg 37339801  T
Q  111 aa 112  Q
    ||    
T  37339800 aa 37339799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 8764071 - 8763956
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||| ||| |||| |||||||||| |||||||||||||||  |||||| |||||||||  ||| || | |||||| |||||||||| ||| ||||||||    
T  8764071 ggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttccccctgggaaacgaacccgatattccccgggtacgtccttgga 8763972  T
Q  112 atgagcatcttgccac 127  Q
    | ||||  ||||||||    
T  8763971 aggagctccttgccac 8763956  T

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Target: chr1; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 131
Target Start/End: Complemental strand, 26325896 - 26325773
Alignment:
Q  8 caatggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatcct 107  Q
    ||||||||| ||| |||| |||||| ||| |||||||||||||||   ||||| |||||||||  ||| |||| |||||| |||||| ||||||| ||||    
T  26325896 caatggtggacgactaatccggctcatgcgtagaggcatgcgcactgaccaagtgttgttcccgctgggaatcgaacccgatattcctcggatacgtcct 26325797  T
Q  108 tggaatgagcatcttgccactgga 131  Q
    || || ||||  ||||||||||||    
T  26325796 tgaaaggagctccttgccactgga 26325773  T

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Target: chr1; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 33418143 - 33418262
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||| ||| |||| ||||||||||||||||||||||||||  |||||||||||| |||  | | |||| || ||||||||| |||| ||| || |||||    
T  33418143 ggtggacgactaatccggctcgtgcatagaggcatgcgcactggccaagcgttgtcccccctaggaatcgaatccggtattctccgggtacgtctttgga 33418242  T
Q  112 atgagcatcttgccactgga 131  Q
    | ||||  ||||||||||||    
T  33418243 aggagctccttgccactgga 33418262  T

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Target: chr1; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 128
Target Start/End: Original strand, 40288510 - 40288621
Alignment:
Q  17 gcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgag 116  Q
    |||| |||| |||||||||  |||||||||||  ||  ||||| ||||||||||  |||||||| |||||||||||||||| |||| ||||||||| |||    
T  40288510 gcgactaatccggctcgtgtgtagaggcatgcatactggccaaccgttgttccccctggaaatcgaacccggtattccccgaatacgtccttggaaagag 40288609  T
Q  117 catcttgccact 128  Q
    |  |||||||||    
T  40288610 ctccttgccact 40288621  T

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Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 13 - 131
Target Start/End: Original strand, 30927756 - 30927874
Alignment:
Q  13 gtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaa 112  Q
    |||| ||| |||| |||||| ||| ||||||||||| ||   ||||||||||||||||| |||||||| |||||| |||| ||| | ||| |||||||||    
T  30927756 gtggacgactaatccggctcatgcgtagaggcatgcacattggccaagcgttgttccctctggaaatcgaacccgatatttcccaggtacgtccttggaa 30927855  T
Q  113 tgagcatcttgccactgga 131  Q
     ||||  ||||||||||||    
T  30927856 ggagctccttgccactgga 30927874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 50503388 - 50503486
Alignment:
Q  11 tggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttg 109  Q
    ||||||||||  ||| |||||||||| |||||||||||||||  | |||| |||||||||  ||| |||| |||||| |||||||||||||| ||||||    
T  50503388 tggtgggcgacaaatccggctcgtgcgtagaggcatgcgcactggtcaagtgttgttccccctgggaatcgaacccgatattccccggatacgtccttg 50503486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 129
Target Start/End: Complemental strand, 10422868 - 10422751
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||| ||| |||| |||||| ||| |||||||||||||||  |||||| ||||||||   | |||||| |||||||||||||||| |||| || |||||    
T  10422868 ggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttcctcctagaaatcgaacccggtattccccgaatacgtcattgga 10422769  T
Q  112 atgagcatcttgccactg 129  Q
    | ||||  ||||||||||    
T  10422768 aggagctccttgccactg 10422751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 12 - 116
Target Start/End: Original strand, 14254296 - 14254400
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||| ||| |||| |||||| ||| || ||||||||| ||  ||||||||||||||||  || ||||| ||| |||||||||||| |||| ||||||||    
T  14254296 ggtggacgactaatccggctcatgcgtaaaggcatgcgtactggccaagcgttgttccccctgaaaatcgaactcggtattccccgaatacgtccttgga 14254395  T
Q  112 atgag 116  Q
    |||||    
T  14254396 atgag 14254400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 9659207 - 9659325
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||| ||| |||| |||||| ||| || |||||||||||| || ||| |||||||||| | |||| || ||||||||||||||||  ||| ||||| ||    
T  9659207 ggtggacgactaatccggctcatgcgtaaaggcatgcgcactagtcaaacgttgttcccctgggaa-tcgaacccggtattccccgagtacgtccttaga 9659305  T
Q  112 atgagcatcttgccactgga 131  Q
    ||||||  ||||||||||||    
T  9659306 atgagctccttgccactgga 9659325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 11397917 - 11398035
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||| ||| |||| || ||| ||| ||||||||| ||||   ||||| |||||||||| | |||| || |||||||||||| |||||||||||||||||    
T  11397917 ggtggacgactaatccgactcatgcgtagaggcatacgcattggccaaacgttgttcccctcggaa-tcgaacccggtattctccggatacatccttgga 11398015  T
Q  112 atgagcatcttgccactgga 131  Q
    | ||||  ||||||||||||    
T  11398016 aggagctccttgccactgga 11398035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 128
Target Start/End: Original strand, 2980977 - 2981075
Alignment:
Q  30 ctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatcttgccact 128  Q
    ||||||| ||||||||||| |||  |||||| |||||||||  ||| |||| ||||| ||||||||||||||| ||| ||||| ||||  |||||||||    
T  2980977 ctcgtgcgtagaggcatgcacactggccaagtgttgttcccgctgggaatcgaacccagtattccccggatacgtccctggaaggagctccttgccact 2981075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 70
Target Start/End: Original strand, 21849229 - 21849291
Alignment:
Q  8 caatggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccc 70  Q
    |||| ||| |||| |||| |||||||||| ||||||||||||||| |||||||||||||||||    
T  21849229 caatagtgagcgactaatccggctcgtgcgtagaggcatgcgcactagccaagcgttgttccc 21849291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 117
Target Start/End: Original strand, 18649380 - 18649485
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||||||| ||||  ||||||| | |||||||||||||||  | ||||||||||||||  || ||||| |||||| ||||| || ||||| ||||||||    
T  18649380 ggtgggcgattaatctggctcgtacgtagaggcatgcgcactggtcaagcgttgttccccctgaaaatcgaacccgatattctccagatacgtccttgga 18649479  T
Q  112 atgagc 117  Q
    | ||||    
T  18649480 aggagc 18649485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 117
Target Start/End: Original strand, 32142874 - 32142978
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    |||| |||| ||||||||||| ||| || ||||||||||||  |||||| |||||||||  || ||||| ||||||||||| || || ||| ||||||||    
T  32142874 ggtgagcgactaattcggctcatgcgtaaaggcatgcgcactggccaagtgttgttccccctgaaaatcgaacccggtatt-ccagggtacgtccttgga 32142972  T
Q  112 atgagc 117  Q
    ||||||    
T  32142973 atgagc 32142978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 128
Target Start/End: Complemental strand, 31152796 - 31152680
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||| ||| ||||| | ||||||  |||||||| ||||||   ||||||||| |||||   ||||||| |||||||||||||| || ||||||||||||    
T  31152796 ggtggacgactaatttgactcgtgtgtagaggcacgcgcactgaccaagcgttattcccccgggaaatcgaacccggtattccctgggtacatccttgga 31152697  T
Q  112 atgagcatcttgccact 128  Q
    | ||||  |||||||||    
T  31152696 aagagctccttgccact 31152680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 47312943 - 47313026
Alignment:
Q  28 ggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaa 112  Q
    ||||| ||| ||||||||| |||||  ||||| |||||||||| | |||| |||||||||||||||||| ||||| |||||||||    
T  47312943 ggctcatgcgtagaggcatacgcactggccaaacgttgttcccctaggaa-tcaaacccggtattccccagatacgtccttggaa 47313026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 28 - 131
Target Start/End: Complemental strand, 6563505 - 6563402
Alignment:
Q  28 ggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatcttgccac 127  Q
    ||||||||| ||||| |||| ||||  ||||||||||||||||  | | |||| |||||||| |||  ||| ||||||||||||| ||||  ||||||||    
T  6563505 ggctcgtgcgtagagacatgtgcactggccaagcgttgttccccctaggaatcgaacccggtgttcttcgggtacatccttggaaggagctccttgccac 6563406  T
Q  128 tgga 131  Q
    ||||    
T  6563405 tgga 6563402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 28 - 127
Target Start/End: Original strand, 12036788 - 12036887
Alignment:
Q  28 ggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatcttgccac 127  Q
    ||||||||| |||||||||||||||  ||||||| ||||||||  | | |||||||||| |||||| |  | ||| ||||||||| |||| |||||||||    
T  12036788 ggctcgtgcgtagaggcatgcgcactggccaagcattgttccccctaggaatcaaacccagtattctctaggtacgtccttggaaggagcttcttgccac 12036887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 30 - 117
Target Start/End: Complemental strand, 15466027 - 15465940
Alignment:
Q  30 ctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagc 117  Q
    ||||||| |||||||||| ||||   |||||||||||||||  |||||||| |||| ||||||||||  |||| ||||||||| ||||    
T  15466027 ctcgtgcgtagaggcatgtgcactgaccaagcgttgttccccctggaaatcgaacctggtattccccaaatacgtccttggaaggagc 15465940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 38 - 109
Target Start/End: Complemental strand, 16263599 - 16263528
Alignment:
Q  38 tagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttg 109  Q
    |||||||||||||||  |||||||||||||||   |||||||| |||| |||||||||| ||||| ||||||    
T  16263599 tagaggcatgcgcactggccaagcgttgttcctcctggaaatcgaacctggtattccccagatacgtccttg 16263528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 17642032 - 17642151
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||| ||| |||| |||||||||| |||||||||||||||  |||||| |||||||||  ||| |||| ||||| ||||| || || ||| ||| ||||    
T  17642032 ggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccagtatttcctgggtacgtccgtgga 17642131  T
Q  112 atgagcatcttgccactgga 131  Q
    | ||||  |||| |||||||    
T  17642132 aggagctccttgtcactgga 17642151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 33 - 112
Target Start/End: Complemental strand, 45536767 - 45536688
Alignment:
Q  33 gtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaa 112  Q
    |||| |||||||||| ||||  |||||||||||||||| || |||||| |||||||||||| |||| ||| || ||||||    
T  45536767 gtgcgtagaggcatgtgcactggccaagcgttgttccccttagaaatcgaacccggtattctccgggtacgtcattggaa 45536688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 8 - 112
Target Start/End: Complemental strand, 13262167 - 13262063
Alignment:
Q  8 caatggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatcct 107  Q
    ||||||||| ||| |||| || ||||||| ||||| |||||| |    |||| |||||||| |  |||||||| |||||||||||||||  |||||||||    
T  13262167 caatggtggacgactaatccgactcgtgcgtagagacatgcgtattgaccaaacgttgttctccctggaaatcgaacccggtattccccatatacatcct 13262068  T
Q  108 tggaa 112  Q
    |||||    
T  13262067 tggaa 13262063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 34719838 - 34719742
Alignment:
Q  30 ctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatcttgcca 126  Q
    ||||||| |||||||||||||||  | |||||||| |||||  ||| |||| ||||| ||||||||| | ||| ||||||||| ||||  |||||||    
T  34719838 ctcgtgcgtagaggcatgcgcactggtcaagcgttattcccagtgggaatcgaacccagtattccccaggtacgtccttggaaggagctccttgcca 34719742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 112
Target Start/End: Original strand, 12744556 - 12744651
Alignment:
Q  17 gcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaa 112  Q
    |||| ||||||||||| ||| ||||| ||||||||| || ||||||||||||||  || ||||| || | | |||||| | ||||| |||||||||    
T  12744556 gcgactaattcggctcatgcgtagagacatgcgcactagtcaagcgttgttccccctgaaaatcgaatctgatattcctcagatacgtccttggaa 12744651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 112
Target Start/End: Original strand, 12755546 - 12755641
Alignment:
Q  17 gcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaa 112  Q
    |||| ||||||||||| ||| ||||| ||||||||| || ||||||||||||||  || ||||| || | | |||||| | ||||| |||||||||    
T  12755546 gcgactaattcggctcatgcgtagagacatgcgcactagtcaagcgttgttccccctgaaaatcgaatctgatattcctcagatacgtccttggaa 12755641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 32150950 - 32151069
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    |||| |||| ||||||||||| ||| || ||||||||||||   ||||  |||||||||  |||||||| |||| | |||||| || | || ||||||||    
T  32150950 ggtgagcgactaattcggctcatgcgtaaaggcatgcgcactgaccaaatgttgttccccctggaaatcgaacctgatattcctcgaaaacgtccttgga 32151049  T
Q  112 atgagcatcttgccactgga 131  Q
    | ||||  ||||||||||||    
T  32151050 aggagctccttgccactgga 32151069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 129
Target Start/End: Original strand, 45361940 - 45362027
Alignment:
Q  42 ggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatcttgccactg 129  Q
    |||||||||||  |||||||||||||||   ||  |||| |||||||||||||| || ||| ||||||||| ||||  ||||||||||    
T  45361940 ggcatgcgcactggccaagcgttgttcctcctgagaatcgaacccggtattcccagggtacgtccttggaaggagctccttgccactg 45362027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 13 - 127
Target Start/End: Complemental strand, 34697414 - 34697300
Alignment:
Q  13 gtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaa 112  Q
    |||||||| |||| |||||| ||| ||||||||||| ||| ||||||| |||||||||  |   |||| |||| ||||||||||| |||| |  ||||||    
T  34697414 gtgggcgactaatccggctcatgcgtagaggcatgcacactagccaagtgttgttccccctaagaatcgaacctggtattccccgaatacgtttttggaa 34697315  T
Q  113 tgagcatcttgccac 127  Q
     ||||  ||||||||    
T  34697314 ggagctccttgccac 34697300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 131
Target Start/End: Complemental strand, 32941 - 32832
Alignment:
Q  22 taattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatct 121  Q
    ||||||||||| ||| |||||||||| ||||   ||||||||||||||   ||| ||||  ||||| |||||||| | ||| ||||||||| ||||   |    
T  32941 taattcggctcatgcgtagaggcatgtgcactgaccaagcgttgttcctcctgggaatcggacccgatattcccccggtacgtccttggaaggagctcat 32842  T
Q  122 tgccactgga 131  Q
    ||||||||||    
T  32841 tgccactgga 32832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 129
Target Start/End: Complemental strand, 34878054 - 34877953
Alignment:
Q  28 ggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatcttgccac 127  Q
    ||||||||  |||||||||||||||  |||||| ||||||||   | | |||| |||| ||||||||||| |||| ||||||||| | ||  ||||||||    
T  34878054 ggctcgtgtgtagaggcatgcgcactggccaagtgttgttccgcctaggaatcgaacctggtattccccgaatacgtccttggaaggtgctccttgccac 34877955  T
Q  128 tg 129  Q
    ||    
T  34877954 tg 34877953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 12 - 128
Target Start/End: Complemental strand, 68596 - 68483
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||||||| |||| |||||||||| |||||||||||||||   |||||||||||||||  ||| |||| |||||| |||| ||||| ||| ||||||||    
T  68596 ggtgggcgactaatccggctcgtgcgtagaggcatgcgcac---ccaagcgttgttccccctgggaatcgaacccgatatttcccgggtacgtccttgga 68500  T
Q  112 atgagcatcttgccact 128  Q
    | ||||  |||||||||    
T  68499 aggagctccttgccact 68483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549 (Bit Score: 45; Significance: 3e-16; HSPs: 2)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 380 - 436
Target Start/End: Complemental strand, 2448 - 2392
Alignment:
Q  380 aatcacgtaccttaagagtttctaattctgggccttcaaatgcatcaaaatacctat 436  Q
    |||||| |||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  2448 aatcacttaccttaagagtttctaattctggaccttccaatgcatcaaaatacctat 2392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 380 - 436
Target Start/End: Complemental strand, 4538 - 4482
Alignment:
Q  380 aatcacgtaccttaagagtttctaattctgggccttcaaatgcatcaaaatacctat 436  Q
    |||||| |||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  4538 aatcacttaccttaagagtttctaattctggaccttccaatgcatcaaaatacctat 4482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 38 - 117
Target Start/End: Complemental strand, 8230 - 8152
Alignment:
Q  38 tagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagc 117  Q
    |||||||||||||||  |||||||||||||||| |||| |||| ||||||||||||||||| ||| ||||||||| ||||    
T  8230 tagaggcatgcgcactggccaagcgttgttccc-ttgggaatcgaacccggtattccccgggtacgtccttggaaggagc 8152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 111
Target Start/End: Original strand, 7862 - 7961
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||||||| |||| | |||  ||| |||||||||||||||  |||||| ||| ||||| |||| |||||||||||||||||||||| ||| ||||||||    
T  7862 ggtgggcgactaatccagctaatgcgtagaggcatgcgcactggccaagtgtttttccccttgggaatcaaacccggtattccccgggtacgtccttgga 7961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 9 - 131
Target Start/End: Original strand, 95005 - 95125
Alignment:
Q  9 aatggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatcctt 108  Q
    |||||||||||| |||| |||||| ||| || ||||||||||||  | ||| ||||||| |||   |||||| |||| |||||||||||||||| | |||    
T  95005 aatggtgggcgactaatccggctcatgcgtaaaggcatgcgcactggtcaaacgttgtttccta--gaaatcgaacctggtattccccggatactttctt 95102  T
Q  109 ggaatgagcatcttgccactgga 131  Q
    |||| ||||  ||||||| ||||    
T  95103 ggaaggagctccttgccattgga 95125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 155738 - 155796
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccc 70  Q
    ||||||||| |||| |||||||||| ||||||||||||||| |||||||||||||||||    
T  155738 ggtgggcgactaatccggctcgtgcgtagaggcatgcgcactagccaagcgttgttccc 155796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 12 - 128
Target Start/End: Complemental strand, 12752 - 12636
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttgga 111  Q
    ||||||||| |||| ||| |||||| ||||||||||| |||  |||||||||||||||   |   |||| |||||||||||||||||  || ||||||||    
T  12752 ggtgggcgactaatccggttcgtgcgtagaggcatgcacactggccaagcgttgttcctcctctgaatcgaacccggtattccccgggcacgtccttgga 12653  T
Q  112 atgagcatcttgccact 128  Q
    | |||| ||||||||||    
T  12652 aggagcttcttgccact 12636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 26269 - 26181
Alignment:
Q  8 caatggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattcccc 96  Q
    |||| |||| ||| |||| |||||||||| ||||||||||| |||  ||||||||||||||||  |||||||| ||||| |||||||||    
T  26269 caattgtggacgactaatccggctcgtgcgtagaggcatgcacactggccaagcgttgttccccctggaaatcgaacccagtattcccc 26181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 6937 - 6851
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccgg 98  Q
    |||| |||| |||| |||||| ||| |||||||||||||||  |||||| |||||||||  ||| |||| |||||||||||||||||    
T  6937 ggtgagcgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccgg 6851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 133
Target Start/End: Complemental strand, 6058 - 5934
Alignment:
Q  8 caatggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatcct 107  Q
    ||||||||| ||| ||||||| ||| ||| |||||||||| ||||  ||||||||||| ||||  |||||||| ||||| ||||||||||| |||  |||    
T  6058 caatggtggacgactaattcgtctcatgcgtagaggcatgtgcactggccaagcgttg-tccccctggaaatcgaacccagtattccccgggtacgccct 5960  T
Q  108 tggaatgagcatcttgccactggaac 133  Q
    || || ||||  ||||||||| ||||    
T  5959 tgaaaggagctccttgccactagaac 5934  T

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Target: scaffold0050 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 72686 - 72610
Alignment:
Q  40 gaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagc 117  Q
    |||||||||||||  | |||||||||||||| ||||||||| ||||||||||| ||| ||||| ||||||||| ||||    
T  72686 gaggcatgcgcactggtcaagcgttgttccccttggaaatcgaacccggtatt-ccctgatacgtccttggaaggagc 72610  T

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Target: scaffold0005 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 127
Target Start/End: Original strand, 271103 - 271216
Alignment:
Q  14 tgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaat 113  Q
    ||||||| |||  |||||||||| ||||| |||||||||   |||||||||||||||  ||| |||| |||||| ||||| |||| ||| |||||||||     
T  271103 tgggcgactaacccggctcgtgcgtagagacatgcgcactgaccaagcgttgttccccctgggaatcgaacccgatattctccgggtacgtccttggaag 271202  T
Q  114 gagcatcttgccac 127  Q
    ||||  ||||||||    
T  271203 gagctccttgccac 271216  T

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Target: scaffold0316 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 96
Target Start/End: Original strand, 1641 - 1725
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattcccc 96  Q
    ||||||||| ||||| ||||| ||| |||||||||||||||  || || ||||||||||  |||||||| |||| ||||||||||    
T  1641 ggtgggcgactaatttggctcatgcgtagaggcatgcgcactggctaatcgttgttccccctggaaatcgaacctggtattcccc 1725  T

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Target: scaffold0341 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 28 - 131
Target Start/End: Complemental strand, 18698 - 18595
Alignment:
Q  28 ggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaatgagcatcttgccac 127  Q
    ||||||||| ||||| |||| ||||  ||||||||||||||||  | | |||| |||||||| |||  ||| ||||||||||||| ||||  ||||||||    
T  18698 ggctcgtgcgtagagacatgtgcactggccaagcgttgttccccctaggaatcgaacccggtgttcttcgggtacatccttggaaggagctccttgccac 18599  T
Q  128 tgga 131  Q
    ||||    
T  18598 tgga 18595  T

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Target: scaffold0029 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 131
Target Start/End: Complemental strand, 41124 - 41007
Alignment:
Q  14 tgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattccccggatacatccttggaat 113  Q
    ||||||| |||| |||||||||| ||||||||||| |||   ||||| ||||||||| |||  |||| |||||| ||||||| |  ||| ||| |||||     
T  41124 tgggcgactaatccggctcgtgcgtagaggcatgcacactgaccaagtgttgttccccttgagaatcgaacccgatattccctgagtacgtccatggaag 41025  T
Q  114 gagcatcttgccactgga 131  Q
    ||||  ||||||||||||    
T  41024 gagctccttgccactgga 41007  T

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Target: scaffold0016 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 12 - 94
Target Start/End: Original strand, 8728 - 8810
Alignment:
Q  12 ggtgggcgaataattcggctcgtgcatagaggcatgcgcacaagccaagcgttgttccctttggaaatcaaacccggtattcc 94  Q
    ||||| ||| |||| | |||| ||| |||||||| ||||||  ||||||||||||||||  ||| |||| |||||||||||||    
T  8728 ggtggacgactaatccagctcatgcgtagaggcaagcgcactggccaagcgttgttccccctgggaatcgaacccggtattcc 8810  T

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