View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2210-Insertion-8 (Length: 657)

Name: NF2210-Insertion-8
Description: NF2210
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2210-Insertion-8
NF2210-Insertion-8
[»] chr8 (1 HSPs)
chr8 (8-649)||(3464394-3465035)


Alignment Details
Target: chr8 (Bit Score: 606; Significance: 0; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 606; E-Value: 0
Query Start/End: Original strand, 8 - 649
Target Start/End: Original strand, 3464394 - 3465035
Alignment:
Q  8 gttaaaaggacactatcttgttttctcaccattggcaataagactttgaaaaaggacacaagttttcagaatttgaccaatccaacatacgtgtgtgcta 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3464394 gttaaaaggacactatcttgttttctcaccattggcaataagactatgaaaaaggacacaagttttcagaatttgaccaatccaacatacgtgtgtgcta 3464493  T
Q  108 gttaaacgtgttatccagcaattccactattggtactatgaatattactagatagacagtcaagtcggtgtcgtgtgaattttatacaacaatacgtaat 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  3464494 gttaaacgtgttatccagcaattccactattggtactatgaatattactagatagacagtcaagtcggtgttgtgtgaattttatacaacaatacgtaat 3464593  T
Q  208 ttactttatatagaaacttgaccaagactttatcttggttcttcattcagtgctggaatacattcatgttttaggttacacttgccgtgaatcactcata 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  3464594 ttactttatatagaaacttgaccaagactttatcttggttcttcattcagtgctggaatacattcatgttttaggttacacttgccgtgaatcacacata 3464693  T
Q  308 tggtctcaattcacagttgtacaccttttcttttcggaaaccttattgaaaaatgttagtcgatttgggcgataaattgctaagggacgacgcgttcatt 407  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  3464694 tggtctcaattcacagttgtacaccttttcttttcggaaaccttattgaaaaatgttaatcgatttgggcgataaattgctaagggacaacgcgttcatt 3464793  T
Q  408 ttgtgtcaggtgtgtgttgttcgtcgtcttatagagtttgagtgtttgtcgtctcgtaatatccatgacttaaatgaattaaatagaacatgatgtaaat 507  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3464794 ttgtgtcaggtgtgtgttgttcgtcgtcttgtagagtttgagtgtctgtcgtctcgtaatatccatgacttaaatgaattaaatagaacatgatgtaaat 3464893  T
Q  508 taatcataaataaactctgtttcgtagtatctaactagttcttatcaagtagcgacatggatagattgtactcttttcgacgagtgtaacaaaaatatga 607  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  3464894 taatcataaataaactctttttcgtagtatctaactagttcttatcaagtagtgacatggatagattgtactcttttcgacgagtgtaacaaaaatatga 3464993  T
Q  608 ggatattttaaggtcttaaatgcaagcaaatttactattttt 649  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  3464994 ggatattttaaggtcttaaatgcaagcaaatttactattttt 3465035  T

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