View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2210R-Insertion-13 (Length: 583)
Name: NF2210R-Insertion-13
Description: NF2210R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2210R-Insertion-13 |
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Alignment Details
Target: chr3 (Bit Score: 382; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 382; E-Value: 0
Query Start/End: Original strand, 9 - 552
Target Start/End: Original strand, 35656730 - 35657286
Alignment:
| Q |
9 |
aacataatccttcacaacttaccgtacatgttgtgccagataaacgacgacaataatctttctaatgcaactctttgttctcaagtccacaaactatgac |
108 |
Q |
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| T |
35656730 |
aacataatccttcacaacttaccgcacatgttgtgccagataaacgacgacaataacctttctaatgcaactctttgttcttaagtccacaaactatgac |
35656829 |
T |
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| Q |
109 |
acgccaaacaacattcacatttcaacctgctgcaccaccgagattaaactgaattcatattatctgataatatcatgagatacgatatctcaatcgctat |
208 |
Q |
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| T |
35656830 |
acgccaaacaacattcacatttcaacctgctgcaccaccgagattaaactgaattcatattatctgataatatcatgagatacgatatctcaatcgttat |
35656929 |
T |
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| Q |
209 |
caacgaacacacctctttattgca-------------attaaatacttgagaatatgaaataatacaatgaaactaaagatat------aatgtgataga |
289 |
Q |
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| T |
35656930 |
caacgaacacacctctttattgcaagtaaaaatgttcattaaataagagggactatgaaataattcaataaaattaaagatattttatcaatgtgataga |
35657029 |
T |
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| Q |
290 |
ctgtctaatctagatcgaacgacctcaaatatcccaagtttgcgtggaatattattgaatgtacgtgagtcggtgagtcggtccattgtttttatccaat |
389 |
Q |
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| T |
35657030 |
ccgtataatctagatcgaacgacctcagatatcccaagtttgcgtgaaatattattgaatgtac--------gtgagtcggtccattgtttttatccaat |
35657121 |
T |
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| Q |
390 |
gtagcttacaccatatccaactattttgttgctgcacagcattagcatagcgcatgagaaaacctgaacag--aatagttcatgcggaatcgttatcttc |
487 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | |||||| |
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| T |
35657122 |
gtagcttacaccatatccaactattttgttgctgcacagcattagcatagcgcatgagaaaacctgaacagtaaatagttcatgcggaatcatcatcttc |
35657221 |
T |
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| Q |
488 |
atcgctctctctttcttcgatccccaaattctgcgaactgcgaaccctaatttcacatttcttcg |
552 |
Q |
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| T |
35657222 |
atcactctctctttcttcgatccccaaattctgcgaactgcgaaccctaatttcacatttcttcg |
35657286 |
T |
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