View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2210R-Insertion-5 (Length: 191)
Name: NF2210R-Insertion-5
Description: NF2210R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2210R-Insertion-5 |
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Alignment Details
Target: chr1 (Bit Score: 148; Significance: 2e-78; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 148; E-Value: 2e-78
Query Start/End: Original strand, 9 - 175
Target Start/End: Original strand, 3981043 - 3981214
Alignment:
| Q |
9 |
gatagtagtaggtatcattccgtatttccattatatatcaaaaccaaaacaatataaaagtctctgattaaattaaacgtaaa-----cgttttcaattt |
103 |
Q |
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| T |
3981043 |
gatagtagtaggtatcattccgtatttccattatatatcaaaaccaaaataatataaaagtctctgattaaattaaacgtaaactaaacgttttcaattt |
3981142 |
T |
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| Q |
104 |
tgacgatcacataatgttcaaataagaagaaaattgttacttgggaagcatgtcagaaaattgtgcatcatc |
175 |
Q |
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| T |
3981143 |
tgacgatcacataatgttcaaataagaagaaaattgttacttgggaagcatgtcagaaaattgtgcatcatc |
3981214 |
T |
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