View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2210_low_22 (Length: 338)

Name: NF2210_low_22
Description: NF2210
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2210_low_22
NF2210_low_22
[»] chr1 (45 HSPs)
chr1 (1-317)||(34257689-34257994)
chr1 (246-323)||(34298405-34298482)
chr1 (259-327)||(16812508-16812576)
chr1 (235-300)||(9828036-9828101)
chr1 (235-324)||(39130769-39130858)
chr1 (233-285)||(1864880-1864932)
chr1 (209-284)||(9629875-9629951)
chr1 (187-317)||(38503295-38503424)
chr1 (249-300)||(9449024-9449075)
chr1 (235-330)||(20157352-20157447)
chr1 (212-282)||(44482240-44482311)
chr1 (246-324)||(398778-398856)
chr1 (235-285)||(28674807-28674857)
chr1 (235-296)||(2784552-2784613)
chr1 (235-300)||(7353495-7353560)
chr1 (232-301)||(10572588-10572657)
chr1 (235-284)||(14332644-14332693)
chr1 (235-300)||(21530681-21530746)
chr1 (235-311)||(2896123-2896199)
chr1 (233-301)||(13997874-13997942)
chr1 (237-312)||(5454127-5454202)
chr1 (213-284)||(6414981-6415052)
chr1 (233-300)||(10233245-10233312)
chr1 (1-53)||(34248601-34248655)
chr1 (235-301)||(22881618-22881684)
chr1 (235-293)||(22907341-22907399)
chr1 (235-285)||(25272489-25272539)
chr1 (235-301)||(36878452-36878518)
chr1 (235-297)||(40258935-40258997)
chr1 (235-284)||(1486711-1486760)
chr1 (219-323)||(6612156-6612261)
chr1 (235-284)||(7918213-7918262)
chr1 (250-323)||(9103609-9103682)
chr1 (235-284)||(16927187-16927236)
chr1 (235-284)||(22515889-22515938)
chr1 (214-282)||(25361896-25361965)
chr1 (235-284)||(34712385-34712434)
chr1 (235-284)||(39953148-39953197)
chr1 (235-284)||(40181879-40181928)
chr1 (235-284)||(41017406-41017455)
chr1 (235-272)||(45534192-45534229)
chr1 (209-321)||(47989469-47989581)
chr1 (237-301)||(609462-609526)
chr1 (249-285)||(15323170-15323206)
chr1 (240-284)||(16164322-16164366)
[»] chr7 (33 HSPs)
chr7 (210-294)||(15902820-15902905)
chr7 (235-329)||(1433417-1433511)
chr7 (235-284)||(3721101-3721150)
chr7 (235-301)||(9408336-9408402)
chr7 (235-312)||(11061078-11061155)
chr7 (235-324)||(26733272-26733361)
chr7 (235-330)||(19206012-19206107)
chr7 (235-301)||(20549782-20549848)
chr7 (232-301)||(5233620-5233689)
chr7 (235-284)||(7328693-7328742)
chr7 (235-324)||(27945009-27945098)
chr7 (213-324)||(24339610-24339722)
chr7 (211-286)||(35297649-35297725)
chr7 (236-327)||(2425736-2425827)
chr7 (235-298)||(3991318-3991381)
chr7 (247-282)||(8737118-8737153)
chr7 (246-284)||(5938480-5938518)
chr7 (246-312)||(10042917-10042983)
chr7 (235-301)||(22602712-22602778)
chr7 (234-284)||(27093414-27093464)
chr7 (234-284)||(27184837-27184887)
chr7 (235-285)||(38143230-38143280)
chr7 (259-324)||(598176-598241)
chr7 (246-307)||(11665453-11665514)
chr7 (235-284)||(16341504-16341553)
chr7 (235-272)||(18213035-18213072)
chr7 (240-301)||(22868033-22868094)
chr7 (235-284)||(23849460-23849509)
chr7 (235-284)||(24146824-24146873)
chr7 (209-301)||(32308111-32308204)
chr7 (235-272)||(39138464-39138501)
chr7 (239-283)||(13427585-13427629)
chr7 (247-311)||(29787383-29787447)
[»] chr6 (36 HSPs)
chr6 (235-328)||(9629347-9629440)
chr6 (235-301)||(5732512-5732578)
chr6 (235-324)||(5000628-5000717)
chr6 (235-284)||(7086803-7086852)
chr6 (234-319)||(9658852-9658937)
chr6 (235-284)||(26178683-26178732)
chr6 (249-330)||(34447374-34447455)
chr6 (246-301)||(17341677-17341732)
chr6 (235-330)||(34595096-34595191)
chr6 (223-284)||(15443703-15443765)
chr6 (235-284)||(7265595-7265644)
chr6 (235-284)||(9025496-9025545)
chr6 (235-284)||(9195756-9195805)
chr6 (238-297)||(4040461-4040520)
chr6 (211-285)||(5970085-5970160)
chr6 (245-284)||(10888986-10889025)
chr6 (238-293)||(25096422-25096477)
chr6 (233-328)||(32299239-32299334)
chr6 (235-312)||(4877922-4878000)
chr6 (235-317)||(9027153-9027235)
chr6 (235-301)||(19040343-19040409)
chr6 (238-324)||(30866149-30866235)
chr6 (259-324)||(853885-853950)
chr6 (235-284)||(7151420-7151469)
chr6 (235-284)||(7938124-7938173)
chr6 (259-324)||(8365545-8365610)
chr6 (247-284)||(8805586-8805623)
chr6 (235-284)||(9617442-9617491)
chr6 (239-284)||(10842540-10842585)
chr6 (235-284)||(11784218-11784267)
chr6 (235-312)||(20371112-20371189)
chr6 (235-284)||(24115849-24115898)
chr6 (232-285)||(25038070-25038123)
chr6 (235-284)||(33001291-33001340)
chr6 (241-285)||(5462693-5462737)
chr6 (248-284)||(17841604-17841640)
[»] chr5 (25 HSPs)
chr5 (235-312)||(22423814-22423891)
chr5 (213-284)||(11685947-11686018)
chr5 (240-312)||(7175026-7175098)
chr5 (255-303)||(26609342-26609390)
chr5 (233-284)||(17123056-17123107)
chr5 (233-284)||(23220991-23221042)
chr5 (235-300)||(12927646-12927711)
chr5 (235-284)||(16203797-16203846)
chr5 (235-284)||(36838551-36838600)
chr5 (235-303)||(28588676-28588744)
chr5 (235-282)||(14873527-14873574)
chr5 (233-284)||(23012408-23012459)
chr5 (245-284)||(35017045-35017084)
chr5 (246-284)||(5467991-5468029)
chr5 (219-284)||(40131629-40131695)
chr5 (235-284)||(3966511-3966560)
chr5 (235-284)||(6471891-6471940)
chr5 (240-301)||(27144454-27144515)
chr5 (235-284)||(30502390-30502439)
chr5 (235-284)||(30542733-30542782)
chr5 (249-285)||(12641681-12641717)
chr5 (248-284)||(14674277-14674313)
chr5 (236-284)||(17593725-17593773)
chr5 (248-312)||(22299496-22299559)
chr5 (237-285)||(30098333-30098381)
[»] chr2 (22 HSPs)
chr2 (236-317)||(23718001-23718082)
chr2 (236-317)||(24105673-24105754)
chr2 (235-320)||(34784984-34785069)
chr2 (245-285)||(32199152-32199192)
chr2 (235-328)||(15972837-15972930)
chr2 (247-324)||(28412318-28412395)
chr2 (248-317)||(30404865-30404934)
chr2 (235-284)||(34691807-34691856)
chr2 (235-284)||(34714219-34714268)
chr2 (237-285)||(30527599-30527647)
chr2 (233-301)||(31808068-31808136)
chr2 (214-284)||(18420414-18420485)
chr2 (245-328)||(21616726-21616809)
chr2 (235-286)||(40361756-40361807)
chr2 (219-280)||(2423881-2423943)
chr2 (235-297)||(5367188-5367249)
chr2 (259-312)||(2331774-2331827)
chr2 (235-284)||(30335425-30335474)
chr2 (235-284)||(44860328-44860377)
chr2 (245-285)||(36281692-36281732)
chr2 (247-319)||(36409641-36409713)
chr2 (233-285)||(39279682-39279734)
[»] scaffold0022 (1 HSPs)
scaffold0022 (239-301)||(90834-90896)
[»] chr8 (28 HSPs)
chr8 (235-301)||(4786340-4786406)
chr8 (235-285)||(11927088-11927138)
chr8 (249-306)||(7253557-7253614)
chr8 (235-324)||(11944633-11944722)
chr8 (235-284)||(14134707-14134756)
chr8 (233-319)||(3677759-3677845)
chr8 (235-301)||(15816131-15816197)
chr8 (235-285)||(33405386-33405436)
chr8 (233-294)||(7658461-7658522)
chr8 (235-284)||(13844598-13844647)
chr8 (236-284)||(39954282-39954330)
chr8 (245-284)||(14731720-14731759)
chr8 (214-324)||(22651944-22652055)
chr8 (237-284)||(34222955-34223002)
chr8 (232-282)||(22493504-22493554)
chr8 (219-284)||(25172683-25172749)
chr8 (219-324)||(29510289-29510395)
chr8 (235-284)||(2572058-2572107)
chr8 (235-284)||(8342980-8343029)
chr8 (232-285)||(11803266-11803319)
chr8 (252-285)||(12936510-12936543)
chr8 (235-284)||(12985400-12985449)
chr8 (235-284)||(20873077-20873126)
chr8 (239-284)||(34897093-34897138)
chr8 (248-284)||(8343324-8343360)
chr8 (245-285)||(13018288-13018328)
chr8 (255-303)||(27101504-27101552)
chr8 (236-284)||(31236580-31236628)
[»] chr4 (23 HSPs)
chr4 (235-293)||(5775360-5775418)
chr4 (235-324)||(35157987-35158076)
chr4 (239-312)||(40742571-40742644)
chr4 (245-320)||(903894-903969)
chr4 (245-328)||(36635288-36635371)
chr4 (235-326)||(40179638-40179729)
chr4 (235-285)||(21720509-21720559)
chr4 (235-284)||(8423720-8423769)
chr4 (259-324)||(20521875-20521940)
chr4 (235-324)||(23292988-23293077)
chr4 (235-324)||(33950104-33950193)
chr4 (235-283)||(9996849-9996897)
chr4 (248-324)||(27706192-27706268)
chr4 (235-286)||(6485613-6485664)
chr4 (243-294)||(21539877-21539928)
chr4 (235-301)||(12895276-12895342)
chr4 (245-319)||(22440612-22440686)
chr4 (235-284)||(7214524-7214573)
chr4 (259-328)||(19482632-19482701)
chr4 (235-300)||(36409514-36409578)
chr4 (235-300)||(36423680-36423744)
chr4 (235-284)||(54580025-54580074)
chr4 (235-303)||(2361977-2362045)
[»] chr3 (36 HSPs)
chr3 (235-285)||(7614417-7614467)
chr3 (235-284)||(11665952-11666001)
chr3 (235-284)||(28678311-28678360)
chr3 (260-328)||(12674528-12674596)
chr3 (247-327)||(25064874-25064954)
chr3 (240-312)||(32804547-32804619)
chr3 (235-306)||(4201382-4201453)
chr3 (209-327)||(16788977-16789096)
chr3 (233-312)||(29508424-29508503)
chr3 (235-297)||(7928445-7928507)
chr3 (209-306)||(8039810-8039908)
chr3 (235-317)||(8383232-8383314)
chr3 (245-310)||(12703989-12704054)
chr3 (232-301)||(17005618-17005687)
chr3 (235-300)||(18426941-18427006)
chr3 (235-284)||(49505156-49505205)
chr3 (259-323)||(24633736-24633799)
chr3 (245-284)||(11313812-11313851)
chr3 (245-312)||(11493373-11493440)
chr3 (246-317)||(14840304-14840375)
chr3 (235-286)||(15314878-15314929)
chr3 (245-300)||(16192762-16192817)
chr3 (230-301)||(26290362-26290433)
chr3 (235-284)||(1509547-1509596)
chr3 (235-324)||(8587023-8587112)
chr3 (235-272)||(8842349-8842386)
chr3 (248-285)||(10268501-10268538)
chr3 (231-284)||(10690260-10690313)
chr3 (247-284)||(15544701-15544738)
chr3 (235-324)||(15796296-15796385)
chr3 (247-284)||(27277852-27277889)
chr3 (235-284)||(45451561-45451610)
chr3 (235-284)||(55401083-55401132)
chr3 (245-301)||(1438795-1438851)
chr3 (248-284)||(21257001-21257037)
chr3 (213-284)||(34910325-34910397)
[»] scaffold0036 (1 HSPs)
scaffold0036 (235-294)||(9749-9808)
[»] scaffold0027 (1 HSPs)
scaffold0027 (235-317)||(46657-46739)
[»] scaffold0697 (1 HSPs)
scaffold0697 (235-300)||(1636-1701)
[»] scaffold0122 (1 HSPs)
scaffold0122 (232-272)||(7540-7580)
[»] scaffold0168 (1 HSPs)
scaffold0168 (237-324)||(21011-21098)
[»] scaffold0044 (1 HSPs)
scaffold0044 (213-283)||(53189-53260)
[»] scaffold0024 (1 HSPs)
scaffold0024 (246-285)||(68255-68294)
[»] scaffold0003 (1 HSPs)
scaffold0003 (247-330)||(241556-241639)
[»] scaffold0236 (1 HSPs)
scaffold0236 (235-285)||(25770-25820)
[»] scaffold0306 (1 HSPs)
scaffold0306 (259-324)||(13368-13433)
[»] scaffold0152 (1 HSPs)
scaffold0152 (259-324)||(21894-21959)
[»] scaffold0020 (1 HSPs)
scaffold0020 (235-284)||(135314-135363)
[»] scaffold0011 (1 HSPs)
scaffold0011 (235-284)||(17751-17800)
[»] scaffold0722 (1 HSPs)
scaffold0722 (248-284)||(7047-7083)
[»] scaffold0223 (1 HSPs)
scaffold0223 (248-324)||(20140-20216)


Alignment Details
Target: chr1 (Bit Score: 167; Significance: 2e-89; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 317
Target Start/End: Original strand, 34257689 - 34257994
Alignment:
Q  1 cattttcattttacactacaagcaagcaagcattccgtcttttccaagtgaactacaatcctccatcaacattgagaattgagaaactggataggtatta 100  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||        || |||||||||||    
T  34257689 cattttcattttacactacaagcaagcaagcactccgtcttttccaagtgaactacaaacctccatcaacattgagaa--------ctagataggtatta 34257780  T
Q  101 aggtatgccactcaaacttgatattaaatatcatatcattcattttcctaagattagttgatagctatgaa--acatacactctttgaattaggtgtgtc 198  Q
    |||||||||||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||  ||||||||| |||| |||||  |||||    
T  34257781 aggtatgccactcaaacttgatattaaatatcatatcattcattgttccaagattagttgatagctatgaaacacatacactttttggattagacgtgtc 34257880  T
Q  199 atggcatcaaacatgtgtcatgtccgacatcgaacaacaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtg 298  Q
    ||||      ||| |||||||||  |||| ||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||| || ||||  |||    
T  34257881 atgg-----tacacgtgtcatgttggacaccgaacaaaaccgacatatataattacactaaattatgtgattttattaaattattaacggtgtcgacgtg 34257975  T
Q  299 tcaatatccgtgtcatgtc 317  Q
    ||||||||||| |||||||    
T  34257976 tcaatatccgtatcatgtc 34257994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 246 - 323
Target Start/End: Complemental strand, 34298482 - 34298405
Alignment:
Q  246 tataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtcatgtctggtgt 323  Q
    |||||||| ||| |||||||||||||| ||||||||||| ||| |||||||||||| | |||||||| ||||||||||    
T  34298482 tataattacactgaattatgtgattttctcaaattattagtggtgtcggtgtgtcagtttccgtgtcgtgtctggtgt 34298405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 259 - 327
Target Start/End: Complemental strand, 16812576 - 16812508
Alignment:
Q  259 aattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtcatgtctggtgtctgt 327  Q
    |||||||||||||| ||||||||||| ||| |||||||||||| | |||||||||||| | ||||||||    
T  16812576 aattatgtgattttgtcaaattattattggtgtcggtgtgtcagtgtccgtgtcatgtttagtgtctgt 16812508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 300
Target Start/End: Complemental strand, 9828101 - 9828036
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtc 300  Q
    ||||||||| ||| ||||| ||| |||||||||||||||||||||||||| ||| ||||| |||||    
T  9828101 acaccgacacataaaattacactgaattatgtgattttatcaaattattagtggtgtcggcgtgtc 9828036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 324
Target Start/End: Original strand, 39130769 - 39130858
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtcatgtctggtgtc 324  Q
    ||||||||| ||||||||| |||||||||| | ||||| | ||||||||||| | ||| | |||||||||||| |||| |||| ||||||    
T  39130769 acaccgacacatataattacactaaattatataattttctaaaattattaatagtgtcagcgtgtcaatatccatgtcgtgtccggtgtc 39130858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 233 - 285
Target Start/End: Original strand, 1864880 - 1864932
Alignment:
Q  233 caacaccgacatatataattatactaaattatgtgattttatcaaattattaa 285  Q
    ||||||||||| ||||||||| ||| |||||||||||||| ||||||||||||    
T  1864880 caacaccgacacatataattacactgaattatgtgattttctcaaattattaa 1864932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 209 - 284
Target Start/End: Original strand, 9629875 - 9629951
Alignment:
Q  209 acatgtgtcatgtccgacatcga-acaacaccgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    ||||||||| ||||||||||||| || |||||||||  |||||| | ||| |||||| |||||||||||||||||||    
T  9629875 acatgtgtcgtgtccgacatcgacacgacaccgacacttataatcacactgaattatatgattttatcaaattatta 9629951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 187 - 317
Target Start/End: Complemental strand, 38503424 - 38503295
Alignment:
Q  187 attaggtgtgtcatggcatcaaacatgtgtcatgtccgacatcga-acaacaccgacatatataattatactaaattatgtgattttatcaaattattaa 285  Q
    ||||||||||||   || ||| ||||||||||||||||||  ||| |  ||||||||| ||||||||| ||| || ||| ||||||| |||||||||||     
T  38503424 attaggtgtgtccctgcgtcagacatgtgtcatgtccgac--cgacaggacaccgacacatataattacactgaaatatatgattttctcaaattattag 38503327  T
Q  286 tggcgtcggtgtgtcaatatccgtgtcatgtc 317  Q
     || |||||||||| | | |||||||||||||    
T  38503326 cggtgtcggtgtgttagtgtccgtgtcatgtc 38503295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 9449024 - 9449075
Alignment:
Q  249 aattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtc 300  Q
    ||||||||| |||||||||||||| ||||||||||||||| || ||||||||    
T  9449024 aattatactgaattatgtgattttttcaaattattaatggtgttggtgtgtc 9449075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 330
Target Start/End: Original strand, 20157352 - 20157447
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtcatgtctggtgtctgtgct 330  Q
    ||||||||| |||| |||| ||| |||||||||||||| ||| |||||||  || |||| ||||||| |  ||||||| |||| ||||||||||||    
T  20157352 acaccgacacatatgattacactgaattatgtgattttctcacattattagcggtgtcgatgtgtcagtgcccgtgtcgtgtccggtgtctgtgct 20157447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 282
Target Start/End: Complemental strand, 44482311 - 44482240
Alignment:
Q  212 tgtgtcatgtccgacatcga-acaacaccgacatatataattatactaaattatgtgattttatcaaattat 282  Q
    |||||| ||||||||| ||| || ||||||||| ||||||||| ||| |||||||||||||| |||||||||    
T  44482311 tgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgaattatgtgattttctcaaattat 44482240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 398778 - 398856
Alignment:
Q  246 tataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtcatgtctggtgtc 324  Q
    |||||||| ||| |||||||||||||| |||||||||||  || ||||| |||||| | |||||||| |||| ||||||    
T  398778 tataattacactgaattatgtgattttttcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtc 398856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 285
Target Start/End: Complemental strand, 28674857 - 28674807
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattattaa 285  Q
    ||||| ||||||||||||||||| |||||||| ||||| ||||||||||||    
T  28674857 acaccaacatatataattatactgaattatgtaattttctcaaattattaa 28674807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 296
Target Start/End: Complemental strand, 2784613 - 2784552
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtg 296  Q
    ||||||||| ||||||||||||| |||||||||||||| | ||||| |||| || |||||||    
T  2784613 acaccgacacatataattatactcaattatgtgattttcttaaatttttaacggtgtcggtg 2784552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 300
Target Start/End: Original strand, 7353495 - 7353560
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtc 300  Q
    ||||||||||||||||||| |||||||||||| ||||| || ||||| ||   |||||||||||||    
T  7353495 acaccgacatatataattacactaaattatgtaattttttcgaattaatagcagcgtcggtgtgtc 7353560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 301
Target Start/End: Original strand, 10572588 - 10572657
Alignment:
Q  232 acaacaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtca 301  Q
    |||||||||||| || |||||| ||  |||||||||||||| ||||||||||| ||| ||||| ||||||    
T  10572588 acaacaccgacacatttaattacaccgaattatgtgattttctcaaattattagtggtgtcggcgtgtca 10572657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 284
Target Start/End: Original strand, 14332644 - 14332693
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    ||||||| | ||||||||| |||||||||||||||||| |||||||||||    
T  14332644 acaccgagacatataattacactaaattatgtgattttctcaaattatta 14332693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 300
Target Start/End: Complemental strand, 21530746 - 21530681
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtc 300  Q
    |||||||||  ||||||||||| ||||||| ||||||| |||||||||||| || ||||| |||||    
T  21530746 acaccgacacttataattataccaaattatatgattttctcaaattattaacggtgtcggcgtgtc 21530681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 311
Target Start/End: Original strand, 2896123 - 2896199
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgt 311  Q
    |||||||||||||||  || ||| |||||||||||||| |||||||||||  || ||||| |||||| | |||||||    
T  2896123 acaccgacatatatagctacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgt 2896199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 301
Target Start/End: Complemental strand, 13997942 - 13997874
Alignment:
Q  233 caacaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtca 301  Q
    ||||||||||| ||||||||| ||| |||||||||||||| | |||| ||||| || ||||| ||||||    
T  13997942 caacaccgacacatataattacactgaattatgtgatttttttaaataattaacggtgtcggcgtgtca 13997874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 237 - 312
Target Start/End: Original strand, 5454127 - 5454202
Alignment:
Q  237 accgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtc 312  Q
    |||| |||||||||||||| | |||||||||||||| |||||||| ||  ||||  || |||||||| ||||||||    
T  5454127 accggcatatataattatatttaattatgtgattttttcaaattaatatcggcgctggcgtgtcaatgtccgtgtc 5454202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 213 - 284
Target Start/End: Original strand, 6414981 - 6415052
Alignment:
Q  213 gtgtcatgtccgacatcgaacaacaccgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    ||||| ||||||||||||||  ||||||||| || |||||| |||  ||||||||||||| |||||| ||||    
T  6414981 gtgtcgtgtccgacatcgaatgacaccgacacatctaattaaactgtattatgtgattttctcaaataatta 6415052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 233 - 300
Target Start/End: Complemental strand, 10233312 - 10233245
Alignment:
Q  233 caacaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtc 300  Q
    |||||| |||| ||||||||| ||| |||||||||||||| |||| |||||| ||| || ||||||||    
T  10233312 caacacagacacatataattacactgaattatgtgattttctcaatttattagtggtgttggtgtgtc 10233245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 34248601 - 34248655
Alignment:
Q  1 cattttcattttacactacaag--caagcaagcattccgtcttttccaagtgaac 53  Q
    ||||||||||||||||||||||  ||||||| || ||| ||||||||||||||||    
T  34248601 cattttcattttacactacaagtacaagcaatcactccttcttttccaagtgaac 34248655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 301
Target Start/End: Original strand, 22881618 - 22881684
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtca 301  Q
    |||||||||  | |||||| |||||||||||||||||| ||||||||||| | | ||||| ||||||    
T  22881618 acaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtca 22881684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 293
Target Start/End: Original strand, 22907341 - 22907399
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcg 293  Q
    |||||||||  ||||||||||| ||||||| | ||||| |||||||||||| |||||||    
T  22907341 acaccgacacttataattataccaaattatataattttctcaaattattaacggcgtcg 22907399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 285
Target Start/End: Complemental strand, 25272539 - 25272489
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattattaa 285  Q
    |||||||||  |||||||| |||||||||||||||||| ||||||| ||||    
T  25272539 acaccgacacttataattacactaaattatgtgattttctcaaattgttaa 25272489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 301
Target Start/End: Complemental strand, 36878518 - 36878452
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtca 301  Q
    |||||||||  |||||||| ||| |||||||||||||| |||||||||||  || ||||| ||||||    
T  36878518 acaccgacacctataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtca 36878452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 297
Target Start/End: Original strand, 40258935 - 40258997
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgt 297  Q
    |||||||||  | |||||| ||| |||||||||||||| ||||||||||||| | ||||||||    
T  40258935 acaccgacacttgtaattacactgaattatgtgattttttcaaattattaattgtgtcggtgt 40258997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 284
Target Start/End: Original strand, 1486711 - 1486760
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    |||||||||  |||||||| ||| |||||||||||||| |||||||||||    
T  1486711 acaccgacacttataattacactgaattatgtgattttttcaaattatta 1486760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 323
Target Start/End: Original strand, 6612156 - 6612261
Alignment:
Q  219 tgtccgacatcga-acaacaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtcatgtc 317  Q
    ||||||||||||| || |||||||||  | |||||| ||| |||||||| ||||| ||||||||||||  |  |||| |||||| | |||||||| ||||    
T  6612156 tgtccgacatcgacacgacaccgacacttgtaattacactgaattatgtaattttttcaaattattaactgtatcggcgtgtcattgtccgtgtcgtgtc 6612255  T
Q  318 tggtgt 323  Q
     |||||    
T  6612256 cggtgt 6612261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 284
Target Start/End: Original strand, 7918213 - 7918262
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    |||| |||| ||||||||| ||| |||||||||||||| |||||||||||    
T  7918213 acactgacacatataattacactgaattatgtgattttctcaaattatta 7918262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 323
Target Start/End: Complemental strand, 9103682 - 9103609
Alignment:
Q  250 attatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtcatgtctggtgt 323  Q
    |||| |||||||||||||||||| ||||||||||||  | ||||| |||||| | |||| ||| |||| |||||    
T  9103682 attaaactaaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgagtcctgtcaggtgt 9103609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 284
Target Start/End: Original strand, 16927187 - 16927236
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    ||||| ||||||||||||| ||| |||||| ||||||| |||||||||||    
T  16927187 acaccaacatatataattacactgaattatatgattttttcaaattatta 16927236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 284
Target Start/End: Original strand, 22515889 - 22515938
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    |||||||||  | |||||| |||||||||||||||||| |||||||||||    
T  22515889 acaccgacacttgtaattacactaaattatgtgattttttcaaattatta 22515938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 282
Target Start/End: Complemental strand, 25361965 - 25361896
Alignment:
Q  214 tgtcatgtccgacatcga-acaacaccgacatatataattatactaaattatgtgattttatcaaattat 282  Q
    |||| ||||||||| ||| || |||| |||| ||||||||| ||| |||||||||||||| |||||||||    
T  25361965 tgtcgtgtccgacaccgacacgacactgacacatataattacactgaattatgtgattttctcaaattat 25361896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 284
Target Start/End: Original strand, 34712385 - 34712434
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    |||| |||| ||||||||| |||||||||||| ||||| |||||||||||    
T  34712385 acactgacacatataattacactaaattatgttattttctcaaattatta 34712434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 284
Target Start/End: Original strand, 39953148 - 39953197
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    ||||||||| ||| ||||| |||||||||||||||||| | |||||||||    
T  39953148 acaccgacacatacaattacactaaattatgtgattttctaaaattatta 39953197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 284
Target Start/End: Complemental strand, 40181928 - 40181879
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    ||||||| | ||||||||| ||| |||||||||||||| |||||||||||    
T  40181928 acaccgatacatataattacactgaattatgtgattttctcaaattatta 40181879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 284
Target Start/End: Original strand, 41017406 - 41017455
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    ||||| ||||||||||||| | |||||||||| ||||| |||||||||||    
T  41017406 acaccaacatatataattacattaaattatgtcattttctcaaattatta 41017455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 272
Target Start/End: Original strand, 45534192 - 45534229
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgatttt 272  Q
    ||||||||||||||| ||| ||||||||||||||||||    
T  45534192 acaccgacatatatacttacactaaattatgtgatttt 45534229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 321
Target Start/End: Complemental strand, 47989581 - 47989469
Alignment:
Q  209 acatgtgtcatgtccgacatcga-acaacaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatcc 307  Q
    ||||||||| ||||||||| ||| || |||||||||  | |||||| ||| |||||||||||||| | |||||||| || | ||||| |||||| | ||     
T  47989581 acatgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgatttttttaaattatt-attgtgtcggcgtgtcagtgtct 47989483  T
Q  308 gtgtcatgtctggt 321  Q
    ||||| ||||||||    
T  47989482 gtgtcgtgtctggt 47989469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 237 - 301
Target Start/End: Original strand, 609462 - 609526
Alignment:
Q  237 accgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtca 301  Q
    |||||||||||| |||||  | |||||||| ||||| ||||||||||| ||| ||||| ||||||    
T  609462 accgacatatatgattatgttgaattatgtaattttctcaaattattagtggtgtcggcgtgtca 609526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 285
Target Start/End: Complemental strand, 15323206 - 15323170
Alignment:
Q  249 aattatactaaattatgtgattttatcaaattattaa 285  Q
    ||||| |||||||||||||||||| ||||||||||||    
T  15323206 aattacactaaattatgtgattttttcaaattattaa 15323170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 284
Target Start/End: Original strand, 16164322 - 16164366
Alignment:
Q  240 gacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    |||| ||||||||| | |||||||||||||||| |||||||||||    
T  16164322 gacacatataattacattaaattatgtgattttttcaaattatta 16164366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 210 - 294
Target Start/End: Complemental strand, 15902905 - 15902820
Alignment:
Q  210 catgtgtcatgtccgacatcga-acaacaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcgg 294  Q
    |||||||| ||||||| | ||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||| |||||    
T  15902905 catgtgtcgtgtccgataccgacacaacaccgacacatataattacactaaattatgtgattttatcaaattattattggtgtcgg 15902820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 235 - 329
Target Start/End: Complemental strand, 1433511 - 1433417
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtcatgtctggtgtctgtgc 329  Q
    ||||||||| ||||||||| || |||| |||||||||| |||||||||||| || ||||| |||||||| |||||||| |||  |||||| ||||    
T  1433511 acaccgacacatataattacaccaaatgatgtgattttctcaaattattaacggtgtcggcgtgtcaatgtccgtgtcgtgttcggtgtccgtgc 1433417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 235 - 284
Target Start/End: Complemental strand, 3721150 - 3721101
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  3721150 acaccgacacatataattatactaaattatgtgattttctcaaattatta 3721101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 235 - 301
Target Start/End: Original strand, 9408336 - 9408402
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtca 301  Q
    |||||||||  | |||||| |||||||||||||||||| ||||||||||||| | ||||||||||||    
T  9408336 acaccgacacttgtaattacactaaattatgtgattttttcaaattattaattgtgtcggtgtgtca 9408402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 312
Target Start/End: Original strand, 11061078 - 11061155
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtc 312  Q
    |||||||||  | ||||||||||||||||||||||||| |||||||||||   | |||||||||||| | ||||||||    
T  11061078 acaccgacacttgtaattatactaaattatgtgattttttcaaattattagctgtgtcggtgtgtcagtgtccgtgtc 11061155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 324
Target Start/End: Complemental strand, 26733361 - 26733272
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtcatgtctggtgtc 324  Q
    ||||||||| || |||||| ||| |||||||||||||| |||||||||||  || ||||  |||||| | |||||||| |||||||||||    
T  26733361 acaccgacacatttaattagactgaattatgtgattttgtcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgtctggtgtc 26733272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 330
Target Start/End: Complemental strand, 19206107 - 19206012
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtcatgtctggtgtctgtgct 330  Q
    ||||||||| ||||||||||| | |||||||||||||| |||||||||||  || ||||| ||||   | |||||||| |||||||| || |||||    
T  19206107 acaccgacacatataattataatgaattatgtgattttctcaaattattagcggtgtcggcgtgttggtgtccgtgtcgtgtctggtatccgtgct 19206012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 301
Target Start/End: Complemental strand, 20549848 - 20549782
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtca 301  Q
    ||||||||| ||||||||| ||| ||||| |||||||| |||||||||||  || ||||||||||||    
T  20549848 acaccgacacatataattacactgaattacgtgattttctcaaattattagcggtgtcggtgtgtca 20549782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 301
Target Start/End: Complemental strand, 5233689 - 5233620
Alignment:
Q  232 acaacaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtca 301  Q
    |||||||| ||| ||||||||| |||| ||||||||||||| ||||||||||||  |  |||||||||||    
T  5233689 acaacaccaacacatataattacactagattatgtgattttctcaaattattaaccgtatcggtgtgtca 5233620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 284
Target Start/End: Original strand, 7328693 - 7328742
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    ||||||||| ||||||||| |||||||||||| ||||| |||||||||||    
T  7328693 acaccgacacatataattacactaaattatgttattttctcaaattatta 7328742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 324
Target Start/End: Complemental strand, 27945098 - 27945009
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtcatgtctggtgtc 324  Q
    |||||||||  | |||||| ||| |||||||| ||||| ||||||||||| ||| ||||| |||||| | |||||||| |||| ||||||    
T  27945098 acaccgacacttgtaattacactgaattatgtaattttctcaaattattagtggtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtc 27945009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 324
Target Start/End: Complemental strand, 24339722 - 24339610
Alignment:
Q  213 gtgtcatgtccgacatcga-acaacaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgt 311  Q
    ||||| ||||||||| ||| || |||||||||  | |||||| ||| |||||||||||||| |||||||||||   | ||||| |||||||| ||| |||    
T  24339722 gtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcaatgtccatgt 24339623  T
Q  312 catgtctggtgtc 324  Q
    | |||| ||||||    
T  24339622 cgtgtccggtgtc 24339610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 286
Target Start/End: Original strand, 35297649 - 35297725
Alignment:
Q  211 atgtgtcatgtccgacatcga-acaacaccgacatatataattatactaaattatgtgattttatcaaattattaat 286  Q
    |||||| |||| ||||||| | || ||||| ||| ||||||||||| | |||||||||||||| |||||||||||||    
T  35297649 atgtgttatgttcgacatcaacacgacaccaacacatataattataatgaattatgtgattttctcaaattattaat 35297725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 236 - 327
Target Start/End: Original strand, 2425736 - 2425827
Alignment:
Q  236 caccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtcatgtctggtgtctgt 327  Q
    |||||||| ||||| ||  ||| |||||||||||||| |||||||||||| || | ||| |||||| |||| ||||| ||||  ||||||||    
T  2425736 caccgacacatatagttccacttaattatgtgattttctcaaattattaacggtgccggcgtgtcagtatctgtgtcgtgtccagtgtctgt 2425827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 235 - 298
Target Start/End: Complemental strand, 3991381 - 3991318
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtg 298  Q
    |||||||||  | |||||||||| |||||||||||||| ||||||||||| | | |||||||||    
T  3991381 acaccgacacttgtaattatactgaattatgtgattttttcaaattattagttgtgtcggtgtg 3991318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 247 - 282
Target Start/End: Original strand, 8737118 - 8737153
Alignment:
Q  247 ataattatactaaattatgtgattttatcaaattat 282  Q
    ||||||||||| ||||||||||||||||||||||||    
T  8737118 ataattatactgaattatgtgattttatcaaattat 8737153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 284
Target Start/End: Complemental strand, 5938518 - 5938480
Alignment:
Q  246 tataattatactaaattatgtgattttatcaaattatta 284  Q
    |||||||||||| |||||||| |||||||||||||||||    
T  5938518 tataattatactgaattatgttattttatcaaattatta 5938480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 312
Target Start/End: Complemental strand, 10042983 - 10042917
Alignment:
Q  246 tataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtc 312  Q
    ||||||||  ||||||||||||| ||||||||||||||| ||| ||||| |||| | | ||||||||    
T  10042983 tataattacgctaaattatgtgaatttatcaaattattagtggtgtcggcgtgtaagtgtccgtgtc 10042917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 301
Target Start/End: Original strand, 22602712 - 22602778
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtca 301  Q
    ||||||||| ||||||||| ||| |||||||||||||| |||||| ||| | || ||||| ||||||    
T  22602712 acaccgacacatataattacactgaattatgtgattttctcaaataatttacggtgtcggcgtgtca 22602778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 284
Target Start/End: Original strand, 27093414 - 27093464
Alignment:
Q  234 aacaccgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    |||||||||  ||||||||| |||||||||||||||||| | |||||||||    
T  27093414 aacaccgacgcatataattacactaaattatgtgattttcttaaattatta 27093464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 284
Target Start/End: Complemental strand, 27184887 - 27184837
Alignment:
Q  234 aacaccgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    |||||||||  ||||||||| |||||||||||||||||| | |||||||||    
T  27184887 aacaccgacgcatataattacactaaattatgtgattttcttaaattatta 27184837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 285
Target Start/End: Complemental strand, 38143280 - 38143230
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattattaa 285  Q
    ||||| ||| ||||||||| | |||||||||||||||| ||||||||||||    
T  38143280 acaccaacacatataattacattaaattatgtgattttttcaaattattaa 38143230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 324
Target Start/End: Complemental strand, 598241 - 598176
Alignment:
Q  259 aattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtcatgtctggtgtc 324  Q
    ||||| |||||||| | |||||||||  || |||| ||||||| | ||||||||||||||||||||    
T  598241 aattacgtgattttcttaaattattagcggtgtcgatgtgtcagtgtccgtgtcatgtctggtgtc 598176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 307
Target Start/End: Original strand, 11665453 - 11665514
Alignment:
Q  246 tataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatcc 307  Q
    |||||||| ||| |||||||||||||| ||||||||||| | | ||| | ||||||||||||    
T  11665453 tataattagactgaattatgtgattttttcaaattattagttgtgtcagcgtgtcaatatcc 11665514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 284
Target Start/End: Complemental strand, 16341553 - 16341504
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    |||||| || ||||||||| ||| |||||||||||||| |||||||||||    
T  16341553 acaccggcacatataattacacttaattatgtgattttctcaaattatta 16341504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 272
Target Start/End: Original strand, 18213035 - 18213072
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgatttt 272  Q
    ||||||||| ||||||||| ||||||||||||||||||    
T  18213035 acaccgacacatataattacactaaattatgtgatttt 18213072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 22868094 - 22868033
Alignment:
Q  240 gacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtca 301  Q
    |||| ||||||||| ||| |||||||||||||| ||| ||||||| ||| ||||| ||||||    
T  22868094 gacacatataattacactgaattatgtgattttctcatattattagtggtgtcggcgtgtca 22868033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 284
Target Start/End: Original strand, 23849460 - 23849509
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    ||||||||| ||||||||||||| ||||||||| |||| | |||||||||    
T  23849460 acaccgacacatataattatactgaattatgtgtttttcttaaattatta 23849509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 284
Target Start/End: Complemental strand, 24146873 - 24146824
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    ||||||||| ||||||||||| | |||||||||||||| | |||||||||    
T  24146873 acaccgacacatataattatattgaattatgtgattttctaaaattatta 24146824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 301
Target Start/End: Complemental strand, 32308204 - 32308111
Alignment:
Q  209 acatgtgtcatgtccgacatcga-acaacaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtca 301  Q
    ||||||||| ||||| ||| ||| || |||| |||| ||| ||||| ||| |||||||||||||| |||||||||||  || ||||| ||||||    
T  32308204 acatgtgtcgtgtccaacaccgacacgacactgacacatacaattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtca 32308111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 272
Target Start/End: Complemental strand, 39138501 - 39138464
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgatttt 272  Q
    ||||||||||||||||||| ||| ||||||||||||||    
T  39138501 acaccgacatatataattacactgaattatgtgatttt 39138464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 283
Target Start/End: Complemental strand, 13427629 - 13427585
Alignment:
Q  239 cgacatatataattatactaaattatgtgattttatcaaattatt 283  Q
    |||||| ||| ||||||||||||||||| ||||| ||||||||||    
T  13427629 cgacatctatgattatactaaattatgtcattttttcaaattatt 13427585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 311
Target Start/End: Original strand, 29787383 - 29787447
Alignment:
Q  247 ataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgt 311  Q
    ||||||| ||| |||||||||||||| |||||||||||  || ||||| |||| ||| |||||||    
T  29787383 ataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgttaatgtccgtgt 29787447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 235 - 328
Target Start/End: Complemental strand, 9629440 - 9629347
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtcatgtctggtgtctgtg 328  Q
    ||||||||| ||||||||| | | |||||||||||||| ||||||||||   || ||||| ||||||||||||||||| ||||  |||||||||    
T  9629440 acaccgacacatataattacattgaattatgtgattttctcaaattattggcggtgtcggcgtgtcaatatccgtgtcgtgtccagtgtctgtg 9629347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 235 - 301
Target Start/End: Original strand, 5732512 - 5732578
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtca 301  Q
    ||||||||| ||||||||| |||||| ||||||||||| |||||||||||| || ||||| ||||||    
T  5732512 acaccgacacatataattacactaaaatatgtgattttctcaaattattaacggtgtcggcgtgtca 5732578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 324
Target Start/End: Original strand, 5000628 - 5000717
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtcatgtctggtgtc 324  Q
    |||| |||||||| ||||||||| ||| |||||||||| || ||||||||  || ||||  |||||| ||||||||||||||| ||||||    
T  5000628 acactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgacgtgtcagtatccgtgtcatgtccggtgtc 5000717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 284
Target Start/End: Complemental strand, 7086852 - 7086803
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    ||||||||| ||||||||| |||||||||||||||||| |||||||||||    
T  7086852 acaccgacacatataattacactaaattatgtgattttctcaaattatta 7086803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 234 - 319
Target Start/End: Complemental strand, 9658937 - 9658852
Alignment:
Q  234 aacaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtcatgtctg 319  Q
    |||||||||| ||||||||| ||| |||||||||||||| | |||||||||  || ||||| |||||| | |||||||| ||||||    
T  9658937 aacaccgacaaatataattacactgaattatgtgattttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtctg 9658852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 284
Target Start/End: Original strand, 26178683 - 26178732
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    ||||||||| |||| |||| ||||||||||||||||||||||||||||||    
T  26178683 acaccgacacatatgattacactaaattatgtgattttatcaaattatta 26178732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 249 - 330
Target Start/End: Original strand, 34447374 - 34447455
Alignment:
Q  249 aattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtcatgtctggtgtctgtgct 330  Q
    ||||| |||||||||| |||||||||||||||||||| || || || |||||| | || |||| |||||||||||| |||||    
T  34447374 aattacactaaattatatgattttatcaaattattaacggtgttggcgtgtcattgtctgtgttatgtctggtgtccgtgct 34447455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 301
Target Start/End: Original strand, 17341677 - 17341732
Alignment:
Q  246 tataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtca 301  Q
    |||||||| ||| ||||||||||||||||||||||||||| || ||||| ||||||    
T  17341677 tataattacactgaattatgtgattttatcaaattattaacggtgtcggcgtgtca 17341732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 330
Target Start/End: Complemental strand, 34595191 - 34595096
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtcatgtctggtgtctgtgct 330  Q
    |||||||||  | |||||| ||| |||||||||||||| ||||||||||| | | ||||| |||||| | |||||||| |||| |||||| |||||    
T  34595191 acaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtgct 34595096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 284
Target Start/End: Complemental strand, 15443765 - 15443703
Alignment:
Q  223 cgacatcga-acaacaccgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    ||||||||| |||||||| ||||||||||||||| | |||||||| ||||| |||||||||||    
T  15443765 cgacatcgacacaacaccaacatatataattatattgaattatgttattttctcaaattatta 15443703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 284
Target Start/End: Original strand, 7265595 - 7265644
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    ||||||||| ||||||||| ||| |||||||||||||| |||||||||||    
T  7265595 acaccgacacatataattacactgaattatgtgattttctcaaattatta 7265644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 284
Target Start/End: Original strand, 9025496 - 9025545
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    ||||||||| ||||||||| ||| |||||||||||||| |||||||||||    
T  9025496 acaccgacacatataattacactgaattatgtgattttctcaaattatta 9025545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 284
Target Start/End: Original strand, 9195756 - 9195805
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    ||||||||| ||||||||| |||||||||||| ||||| |||||||||||    
T  9195756 acaccgacacatataattacactaaattatgtcattttctcaaattatta 9195805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 238 - 297
Target Start/End: Complemental strand, 4040520 - 4040461
Alignment:
Q  238 ccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgt 297  Q
    |||||||||||||||||||| ||| ||| |||||| | ||||||||| ||| ||||||||    
T  4040520 ccgacatatataattatactgaataatgcgattttcttaaattattagtggtgtcggtgt 4040461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 211 - 285
Target Start/End: Original strand, 5970085 - 5970160
Alignment:
Q  211 atgtgtcatgtccgacatcga-acaacaccgacatatataattatactaaattatgtgattttatcaaattattaa 285  Q
    ||||||| ||||||||| ||| || ||||| |||| | |||||| ||| |||||||||||||| ||||||||||||    
T  5970085 atgtgtcgtgtccgacaccgacacgacacccacatttgtaattacactgaattatgtgattttttcaaattattaa 5970160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 245 - 284
Target Start/End: Original strand, 10888986 - 10889025
Alignment:
Q  245 atataattatactaaattatgtgattttatcaaattatta 284  Q
    ||||||| | ||||||||||||||||||||||||||||||    
T  10888986 atataatcacactaaattatgtgattttatcaaattatta 10889025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 238 - 293
Target Start/End: Complemental strand, 25096477 - 25096422
Alignment:
Q  238 ccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcg 293  Q
    ||||||||| |||||| |||| ||||||||||||| ||||||||||| ||| ||||    
T  25096477 ccgacatatgtaattacactagattatgtgattttctcaaattattagtggtgtcg 25096422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 233 - 328
Target Start/End: Complemental strand, 32299334 - 32299239
Alignment:
Q  233 caacaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtcatgtctggtgtctgtg 328  Q
    |||||||||||  ||||| || | | |||||||||||||| |||||||||||   | || ||||||||| |||  |||| ||||||||||||||||    
T  32299334 caacaccgacacgtataactacattgaattatgtgattttctcaaattattatcagggttggtgtgtcagtatttgtgttatgtctggtgtctgtg 32299239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 312
Target Start/End: Complemental strand, 4878000 - 4877922
Alignment:
Q  235 acaccgacatatataattatactaaattatgtga-ttttatcaaattattaatggcgtcggtgtgtcaatatccgtgtc 312  Q
    |||||||||  | |||||||||| |||||||||| |||| |||||||||||   | |||||||||||| ||||||||||    
T  4878000 acaccgacacttgtaattatacttaattatgtgacttttttcaaattattagctgtgtcggtgtgtcactatccgtgtc 4877922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 317
Target Start/End: Complemental strand, 9027235 - 9027153
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtcatgtc 317  Q
    ||||||||| ||||||||| ||  |||||||||||| | |||||||||||  || ||||| |||||| | |||||||| ||||    
T  9027235 acaccgacacatataattacacggaattatgtgattatctcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtc 9027153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 301
Target Start/End: Complemental strand, 19040409 - 19040343
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtca 301  Q
    |||| |||| ||||||||| ||| |||||||||||||| |||||||||||  || ||||| ||||||    
T  19040409 acacagacacatataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtca 19040343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 324
Target Start/End: Original strand, 30866149 - 30866235
Alignment:
Q  238 ccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtcatgtctggtgtc 324  Q
    |||||| ||||||||| | | |||||||||||||| |||||||||||  || || ||||||||  | || |||||||||| ||||||    
T  30866149 ccgacacatataattacattgaattatgtgattttctcaaattattagcggtgttggtgtgtcggtgtcagtgtcatgtccggtgtc 30866235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 324
Target Start/End: Original strand, 853885 - 853950
Alignment:
Q  259 aattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtcatgtctggtgtc 324  Q
    |||||||||||||| ||||||||||| | | ||||| ||||||  ||||||||| |||| ||||||    
T  853885 aattatgtgattttttcaaattattagttgtgtcggcgtgtcagcatccgtgtcgtgtccggtgtc 853950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 284
Target Start/End: Complemental strand, 7151469 - 7151420
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    ||||| ||| ||||||||| ||| |||||||||||||| |||||||||||    
T  7151469 acaccaacacatataattacacttaattatgtgattttttcaaattatta 7151420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 284
Target Start/End: Complemental strand, 7938173 - 7938124
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    |||||||||  |||||||| |||||||||| ||||||| |||||||||||    
T  7938173 acaccgacacttataattacactaaattatatgattttttcaaattatta 7938124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 324
Target Start/End: Original strand, 8365545 - 8365610
Alignment:
Q  259 aattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtcatgtctggtgtc 324  Q
    ||||||||||| || ||||||||||| | | ||||| |||||| | |||||||| |||||||||||    
T  8365545 aattatgtgatattttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtctggtgtc 8365610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 284
Target Start/End: Original strand, 8805586 - 8805623
Alignment:
Q  247 ataattatactaaattatgtgattttatcaaattatta 284  Q
    ||||||| |||||||||||||||||| |||||||||||    
T  8805586 ataattacactaaattatgtgattttctcaaattatta 8805623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 284
Target Start/End: Complemental strand, 9617491 - 9617442
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    ||||||||| ||||||||| | | |||||||||||||| |||||||||||    
T  9617491 acaccgacacatataattacattgaattatgtgattttctcaaattatta 9617442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 284
Target Start/End: Complemental strand, 10842585 - 10842540
Alignment:
Q  239 cgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    ||||| |||| |||| |||||||||||||||||| |||||||||||    
T  10842585 cgacacatatgattacactaaattatgtgattttttcaaattatta 10842540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 284
Target Start/End: Original strand, 11784218 - 11784267
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    ||||||||||||||||||| ||| | | |||||||||| |||||||||||    
T  11784218 acaccgacatatataattacactgattcatgtgattttctcaaattatta 11784267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 312
Target Start/End: Original strand, 20371112 - 20371189
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtc 312  Q
    ||||||||| ||||||| | | | | |||||||||||| |||||||||||  || ||||| |||||||| ||||||||    
T  20371112 acaccgacacatataatcacattgagttatgtgattttctcaaattattagcggtgtcggcgtgtcaatgtccgtgtc 20371189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 284
Target Start/End: Original strand, 24115849 - 24115898
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    ||||| ||||||||||||||| | |||||||||||||| | |||||||||    
T  24115849 acaccaacatatataattatattgaattatgtgattttttgaaattatta 24115898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 285
Target Start/End: Original strand, 25038070 - 25038123
Alignment:
Q  232 acaacaccgacatatataattatactaaattatgtgattttatcaaattattaa 285  Q
    |||| |||||||| | |||||| |||||||||||| ||||| ||||||||||||    
T  25038070 acaataccgacatttgtaattacactaaattatgtaattttctcaaattattaa 25038123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 284
Target Start/End: Original strand, 33001291 - 33001340
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    ||||||||| ||||||||| | | |||||||||||||| |||||||||||    
T  33001291 acaccgacacatataattacatttaattatgtgattttttcaaattatta 33001340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 285
Target Start/End: Complemental strand, 5462737 - 5462693
Alignment:
Q  241 acatatataattatactaaattatgtgattttatcaaattattaa 285  Q
    ||||||||||||| | | |||||||||||||| ||||||||||||    
T  5462737 acatatataattacaatgaattatgtgattttctcaaattattaa 5462693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 284
Target Start/End: Original strand, 17841604 - 17841640
Alignment:
Q  248 taattatactaaattatgtgattttatcaaattatta 284  Q
    |||||| |||||||||||||||||| |||||||||||    
T  17841604 taattacactaaattatgtgattttttcaaattatta 17841640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 235 - 312
Target Start/End: Original strand, 22423814 - 22423891
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtc 312  Q
    ||||||||||||||||||||| | |||||||||||||| ||||||||||| | | ||| | |||||| ||||||||||    
T  22423814 acaccgacatatataattatattgaattatgtgattttctcaaattattagtagtgtcagggtgtcagtatccgtgtc 22423891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 284
Target Start/End: Complemental strand, 11686018 - 11685947
Alignment:
Q  213 gtgtcatgtccgacatcgaacaacaccgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    ||||| ||||||||| ||||| ||||||||| ||||||||| ||||||||||| || ||| |||||||||||    
T  11686018 gtgtcgtgtccgacaccgaacgacaccgacacatataattacactaaattatgcgactttctcaaattatta 11685947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 240 - 312
Target Start/End: Original strand, 7175026 - 7175098
Alignment:
Q  240 gacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtc 312  Q
    |||| |||||||||| | ||||||||||||||| |||||||||||| || |||| ||||||| | ||||||||    
T  7175026 gacacatataattatgccaaattatgtgattttctcaaattattaacggtgtcgatgtgtcagtgtccgtgtc 7175098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 255 - 303
Target Start/End: Complemental strand, 26609390 - 26609342
Alignment:
Q  255 actaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaat 303  Q
    ||||||| |||||||||||||||||||||| ||| ||||||||||||||    
T  26609390 actaaatcatgtgattttatcaaattattagtggtgtcggtgtgtcaat 26609342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 284
Target Start/End: Complemental strand, 17123107 - 17123056
Alignment:
Q  233 caacaccgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    |||||||||||||||||||| ||||  ||||||||||||| |||||||||||    
T  17123107 caacaccgacatatataattgtacttgattatgtgattttctcaaattatta 17123056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 284
Target Start/End: Complemental strand, 23221042 - 23220991
Alignment:
Q  233 caacaccgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    ||||||||||| |||| || | ||||||||||||||||||||||||||||||    
T  23221042 caacaccgacacatatgataacactaaattatgtgattttatcaaattatta 23220991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 300
Target Start/End: Complemental strand, 12927711 - 12927646
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtc 300  Q
    |||| |||||||||||||| |||||||||| ||||||| |||||||||||  |  |||||||||||    
T  12927711 acactgacatatataattacactaaattatatgattttctcaaattattagcgatgtcggtgtgtc 12927646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 284
Target Start/End: Original strand, 16203797 - 16203846
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    ||||||||| ||||||||| ||||||||||| |||||| |||||||||||    
T  16203797 acaccgacacatataattacactaaattatgagattttctcaaattatta 16203846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 284
Target Start/End: Complemental strand, 36838600 - 36838551
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    ||||||||| ||||||||| |||||||||||| ||||| |||||||||||    
T  36838600 acaccgacacatataattacactaaattatgtaattttctcaaattatta 36838551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 303
Target Start/End: Original strand, 28588676 - 28588744
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaat 303  Q
    |||||||||  |||||||| ||| |||||||||||||| |||||||||||  || ||||| ||||||||    
T  28588676 acaccgacacctataattacactgaattatgtgattttctcaaattattaccggtgtcggcgtgtcaat 28588744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 235 - 282
Target Start/End: Complemental strand, 14873574 - 14873527
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattat 282  Q
    ||||||||| ||||||||| ||||||||||||| |||| |||||||||    
T  14873574 acaccgacacatataattacactaaattatgtgcttttctcaaattat 14873527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 233 - 284
Target Start/End: Original strand, 23012408 - 23012459
Alignment:
Q  233 caacaccgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    ||||||||||| ||||||||| | |||||||| ||||||| |||||||||||    
T  23012408 caacaccgacacatataattacattaaattatatgattttctcaaattatta 23012459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 245 - 284
Target Start/End: Complemental strand, 35017084 - 35017045
Alignment:
Q  245 atataattatactaaattatgtgattttatcaaattatta 284  Q
    ||||||||| |||||||||||||||||| |||||||||||    
T  35017084 atataattacactaaattatgtgattttctcaaattatta 35017045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 284
Target Start/End: Original strand, 5467991 - 5468029
Alignment:
Q  246 tataattatactaaattatgtgattttatcaaattatta 284  Q
    |||||||| ||| ||||||||||||||||||||||||||    
T  5467991 tataattacactgaattatgtgattttatcaaattatta 5468029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 40131695 - 40131629
Alignment:
Q  219 tgtccgacatcga-acaacaccgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    |||| |||||||| || ||||||| || |||||||| ||| |||||||||||||| |||||||||||    
T  40131695 tgtctgacatcgatacgacaccgatatttataattaaactgaattatgtgattttttcaaattatta 40131629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 284
Target Start/End: Complemental strand, 3966560 - 3966511
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    ||||||||| ||||||||| ||| |||| ||||||||| |||||||||||    
T  3966560 acaccgacacatataattacactgaattgtgtgattttctcaaattatta 3966511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 284
Target Start/End: Original strand, 6471891 - 6471940
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    ||||| ||| ||||||||| ||| |||||||||||||| |||||||||||    
T  6471891 acacccacacatataattacactgaattatgtgattttctcaaattatta 6471940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 27144515 - 27144454
Alignment:
Q  240 gacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtca 301  Q
    |||| ||||||||| |||||||||||||||||  |||||||||||  || ||||| ||||||    
T  27144515 gacacatataattacactaaattatgtgatttcctcaaattattagcggtgtcggcgtgtca 27144454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 284
Target Start/End: Original strand, 30502390 - 30502439
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    ||||||||| ||||||||| ||| ||||| |||||||| |||||||||||    
T  30502390 acaccgacacatataattacactgaattaagtgattttctcaaattatta 30502439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 284
Target Start/End: Original strand, 30542733 - 30542782
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    ||||||||| ||||||||| ||| ||||| |||||||| |||||||||||    
T  30542733 acaccgacacatataattacactgaattaagtgattttctcaaattatta 30542782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 285
Target Start/End: Complemental strand, 12641717 - 12641681
Alignment:
Q  249 aattatactaaattatgtgattttatcaaattattaa 285  Q
    |||||||||||||||||||||||| | ||||||||||    
T  12641717 aattatactaaattatgtgatttttttaaattattaa 12641681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 284
Target Start/End: Complemental strand, 14674313 - 14674277
Alignment:
Q  248 taattatactaaattatgtgattttatcaaattatta 284  Q
    |||||| |||||||||||||||||| |||||||||||    
T  14674313 taattacactaaattatgtgattttttcaaattatta 14674277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 284
Target Start/End: Original strand, 17593725 - 17593773
Alignment:
Q  236 caccgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    |||| ||||||||||||| ||| ||||| |||||||| |||||||||||    
T  17593725 caccaacatatataattacactgaattacgtgattttctcaaattatta 17593773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 312
Target Start/End: Original strand, 22299496 - 22299559
Alignment:
Q  248 taattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtc 312  Q
    |||||||||| ||| |||||||||| | |||||||||   | |||||||||||||||||||||||    
T  22299496 taattatactgaatcatgtgatttttt-aaattattagctgtgtcggtgtgtcaatatccgtgtc 22299559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 237 - 285
Target Start/End: Complemental strand, 30098381 - 30098333
Alignment:
Q  237 accgacatatataattatactaaattatgtgattttatcaaattattaa 285  Q
    |||||||| |||||||| | | |||||||||||||| ||||||||||||    
T  30098381 accgacatctataattacattgaattatgtgattttctcaaattattaa 30098333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 236 - 317
Target Start/End: Complemental strand, 23718082 - 23718001
Alignment:
Q  236 caccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtcatgtc 317  Q
    |||||||| ||||||||| ||| |||||||||| ||| |||||||||||  || |||||||||||| | |||||||||||||    
T  23718082 caccgacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtcatgtc 23718001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 236 - 317
Target Start/End: Complemental strand, 24105754 - 24105673
Alignment:
Q  236 caccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtcatgtc 317  Q
    |||||||| ||||||||| ||| |||||||||| ||| |||||||||||  || |||||||||||| | |||||||||||||    
T  24105754 caccgacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtcatgtc 24105673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 320
Target Start/End: Original strand, 34784984 - 34785069
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtcatgtctgg 320  Q
    ||||||||| ||||||||| |||||||||||||||||| | |||  |||| | | |||||||||||| | |||||||| |||||||    
T  34784984 acaccgacacatataattacactaaattatgtgattttctaaaaaaattagttgtgtcggtgtgtcagtgtccgtgtcgtgtctgg 34785069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 245 - 285
Target Start/End: Original strand, 32199152 - 32199192
Alignment:
Q  245 atataattatactaaattatgtgattttatcaaattattaa 285  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  32199152 atataattatacttaattatgtgattttatcaaattattaa 32199192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 328
Target Start/End: Complemental strand, 15972930 - 15972837
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtcatgtctggtgtctgtg 328  Q
    |||||||||  | |||||| ||| |||| ||| ||||| ||||||||||||| | ||||| |||||| | |||||||| | |||||||||||||    
T  15972930 acaccgacacttgtaattacactgaattgtgtaattttttcaaattattaattgtgtcggcgtgtcagtgtccgtgtcgtatctggtgtctgtg 15972837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 324
Target Start/End: Complemental strand, 28412395 - 28412318
Alignment:
Q  247 ataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtcatgtctggtgtc 324  Q
    ||||||| ||| ||||||||||||||||||||||||||| || || |  |||| | | |||||||| |||||||||||    
T  28412395 ataattacactgaattatgtgattttatcaaattattaacggtgttgacgtgttagtgtccgtgtcgtgtctggtgtc 28412318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 248 - 317
Target Start/End: Original strand, 30404865 - 30404934
Alignment:
Q  248 taattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtcatgtc 317  Q
    |||||| ||| |||||||||||||| ||||||||||||  | ||||| |||||| | |||||||||||||    
T  30404865 taattacactgaattatgtgattttttcaaattattaaccgtgtcggcgtgtcagtgtccgtgtcatgtc 30404934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 284
Target Start/End: Original strand, 34691807 - 34691856
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    ||||||||| ||||||||| ||| |||||| |||||||||||||||||||    
T  34691807 acaccgacacatataattacactgaattatatgattttatcaaattatta 34691856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 284
Target Start/End: Original strand, 34714219 - 34714268
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    ||||||||| ||||||||| ||| |||||| |||||||||||||||||||    
T  34714219 acaccgacacatataattacactgaattatatgattttatcaaattatta 34714268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 285
Target Start/End: Original strand, 30527599 - 30527647
Alignment:
Q  237 accgacatatataattatactaaattatgtgattttatcaaattattaa 285  Q
    ||||||| ||||||||| |||||||||| ||||||| ||||||||||||    
T  30527599 accgacacatataattacactaaattatatgattttctcaaattattaa 30527647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 301
Target Start/End: Complemental strand, 31808136 - 31808068
Alignment:
Q  233 caacaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtca 301  Q
    |||||| |||| ||||||||| ||| |||||||||||||| | |||||||||  || ||||||||||||    
T  31808136 caacactgacacatataattacactgaattatgtgattttgttaaattattagcggtgtcggtgtgtca 31808068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 18420414 - 18420485
Alignment:
Q  214 tgtcatgtccgacatcga-acaacaccgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    ||||||||||||||| || ||||||||||||  |||||||  | | |||||||||||||| |||||||||||    
T  18420414 tgtcatgtccgacatggacacaacaccgacacttataattgcattgaattatgtgattttctcaaattatta 18420485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 245 - 328
Target Start/End: Complemental strand, 21616809 - 21616726
Alignment:
Q  245 atataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtcatgtctggtgtctgtg 328  Q
    ||||||||| ||| |||||||||||||| |||||||||||  || ||||| |||||  | |||||||| ||||  |||||||||    
T  21616809 atataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtccgtgtccgtgtcgtgtcatgtgtctgtg 21616726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 235 - 286
Target Start/End: Original strand, 40361756 - 40361807
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattattaat 286  Q
    ||||| ||| ||||||||| |||||||||||| ||||| |||||||||||||    
T  40361756 acaccaacagatataattacactaaattatgtaattttttcaaattattaat 40361807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 280
Target Start/End: Complemental strand, 2423943 - 2423881
Alignment:
Q  219 tgtccgacatcga-acaacaccgacatatataattatactaaattatgtgattttatcaaatt 280  Q
    ||||||||||||| || |||| |||  |||||||||||||||||||| ||||||| |||||||    
T  2423943 tgtccgacatcgatacgacactgactcatataattatactaaattatatgattttctcaaatt 2423881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 297
Target Start/End: Complemental strand, 5367249 - 5367188
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgt 297  Q
    ||||||||| ||||||||| ||| |||||||||||||  ||||||||||| | ||||||||||    
T  5367249 acaccgacacatataattacactgaattatgtgatttcctcaaattattagt-gcgtcggtgt 5367188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 312
Target Start/End: Complemental strand, 2331827 - 2331774
Alignment:
Q  259 aattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtc 312  Q
    |||||||||||||| ||||||||||||||| ||  | |||||||| ||||||||    
T  2331827 aattatgtgattttctcaaattattaatggtgtttgcgtgtcaatgtccgtgtc 2331774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 284
Target Start/End: Complemental strand, 30335474 - 30335425
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    |||||||||| | |||||| |||||||||||| ||||| |||||||||||    
T  30335474 acaccgacatttgtaattacactaaattatgtcattttttcaaattatta 30335425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 284
Target Start/End: Complemental strand, 44860377 - 44860328
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    ||||||||| ||||||||| ||| ||||||| |||||| |||||||||||    
T  44860377 acaccgacacatataattacactgaattatgcgattttctcaaattatta 44860328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 285
Target Start/End: Complemental strand, 36281732 - 36281692
Alignment:
Q  245 atataattatactaaattatgtgattttatcaaattattaa 285  Q
    |||| |||| |||||||||||||||||| ||||||||||||    
T  36281732 atatgattacactaaattatgtgattttctcaaattattaa 36281692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 319
Target Start/End: Original strand, 36409641 - 36409713
Alignment:
Q  247 ataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtcatgtctg 319  Q
    ||||||| |||||||||||||||||| ||||||||| |  || |||||  ||| | |||||||||| ||||||    
T  36409641 ataattacactaaattatgtgattttttcaaattatcagcggtgtcggcatgtgagtatccgtgtcgtgtctg 36409713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 285
Target Start/End: Complemental strand, 39279734 - 39279682
Alignment:
Q  233 caacaccgacatatataattatactaaattatgtgattttatcaaattattaa 285  Q
    ||||||||||| ||||||||| ||| |||||| ||||||| ||| ||||||||    
T  39279734 caacaccgacacatataattacactgaattatttgattttctcatattattaa 39279682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 239 - 301
Target Start/End: Complemental strand, 90896 - 90834
Alignment:
Q  239 cgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtca 301  Q
    ||||||||||||||| ||| |||||| ||||||| ||||||||||||||| || |||||||||    
T  90896 cgacatatataattacactgaattatatgattttctcaaattattaatggtgttggtgtgtca 90834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 235 - 301
Target Start/End: Original strand, 4786340 - 4786406
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtca 301  Q
    ||||||||| ||||||||| ||| |||||||||||||| | ||||||||||||| ||||| ||||||    
T  4786340 acaccgacacatataattacactgaattatgtgattttcttaaattattaatggtgtcggcgtgtca 4786406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 235 - 285
Target Start/End: Original strand, 11927088 - 11927138
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattattaa 285  Q
    ||||||||| ||||||||| ||| |||||||||||||||||||||||||||    
T  11927088 acaccgacacatataattacactgaattatgtgattttatcaaattattaa 11927138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 249 - 306
Target Start/End: Complemental strand, 7253614 - 7253557
Alignment:
Q  249 aattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatc 306  Q
    |||||||||||||||| ||||||| ||| |||||||| |||||||||||||| |||||    
T  7253614 aattatactaaattatatgattttctcatattattaaaggcgtcggtgtgtcgatatc 7253557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 324
Target Start/End: Complemental strand, 11944722 - 11944633
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtcatgtctggtgtc 324  Q
    ||||||||| ||||||||| ||| | |||||||||||||||||||||||||  | ||||| |||| |  ||||||||| ||| |||||||    
T  11944722 acaccgacacatataattacactgagttatgtgattttatcaaattattaacagtgtcggcgtgttagcatccgtgtcgtgtttggtgtc 11944633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 284
Target Start/End: Complemental strand, 14134756 - 14134707
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    ||||||||||||||||||| ||| |||||||||||||| |||||||||||    
T  14134756 acaccgacatatataattacactgaattatgtgattttctcaaattatta 14134707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 319
Target Start/End: Complemental strand, 3677845 - 3677759
Alignment:
Q  233 caacaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtcatgtctg 319  Q
    ||||||||| | ||||||||| |   |||||||||||||| | ||||||||||| | |||| ||||||| |||||||||| ||||||    
T  3677845 caacaccgatacatataattacatagaattatgtgattttttaaaattattaattgtgtcgatgtgtcagtatccgtgtcgtgtctg 3677759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 301
Target Start/End: Original strand, 15816131 - 15816197
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtca 301  Q
    |||||||||  |||||||| |||||||||||||||||| ||||||||||| | | ||||| ||||||    
T  15816131 acaccgacacttataattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtca 15816197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 285
Target Start/End: Original strand, 33405386 - 33405436
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattattaa 285  Q
    ||||||||| ||||||||| ||||||||||||| |||| ||||||||||||    
T  33405386 acaccgacacatataattacactaaattatgtgtttttctcaaattattaa 33405436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 233 - 294
Target Start/End: Complemental strand, 7658522 - 7658461
Alignment:
Q  233 caacaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcgg 294  Q
    ||||||||||| ||||||||| ||| |||||||| ||||| ||||||||||| ||| |||||    
T  7658522 caacaccgacaaatataattacactgaattatgtaattttctcaaattattagtggtgtcgg 7658461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 284
Target Start/End: Original strand, 13844598 - 13844647
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    ||||||||| ||||||||| ||| |||||||||||||| |||||||||||    
T  13844598 acaccgacacatataattacactcaattatgtgattttctcaaattatta 13844647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 284
Target Start/End: Original strand, 39954282 - 39954330
Alignment:
Q  236 caccgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    ||||| || ||||||||| |||||||||||||||||| |||||||||||    
T  39954282 caccgtcacatataattacactaaattatgtgattttctcaaattatta 39954330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 245 - 284
Target Start/End: Complemental strand, 14731759 - 14731720
Alignment:
Q  245 atataattatactaaattatgtgattttatcaaattatta 284  Q
    ||||||||| |||||||||||||||||| |||||||||||    
T  14731759 atataattacactaaattatgtgattttctcaaattatta 14731720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 214 - 324
Target Start/End: Complemental strand, 22652055 - 22651944
Alignment:
Q  214 tgtcatgtccgacatcga-acaacaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtc 312  Q
    |||| ||||||||| ||| || |||||||||  | |||||||| | |||||||||||||| |||||||||||   | ||||| |||||| | ||||||||    
T  22652055 tgtcgtgtccgacaccgacacgacaccgacacttgtaattatattgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 22651956  T
Q  313 atgtctggtgtc 324  Q
     |||| ||||||    
T  22651955 gtgtccggtgtc 22651944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 237 - 284
Target Start/End: Complemental strand, 34223002 - 34222955
Alignment:
Q  237 accgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    ||||||| ||||||||| ||| |||||||||||||||| |||||||||    
T  34223002 accgacacatataattacacttaattatgtgattttattaaattatta 34222955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 282
Target Start/End: Complemental strand, 22493554 - 22493504
Alignment:
Q  232 acaacaccgacatatataattatactaaattatgtgattttatcaaattat 282  Q
    ||||||||||||||||| |||| ||| |||||||||||||| | |||||||    
T  22493554 acaacaccgacatatatgattacactgaattatgtgattttttaaaattat 22493504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 284
Target Start/End: Original strand, 25172683 - 25172749
Alignment:
Q  219 tgtccgacatcga-acaacaccgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    |||||||||| || || ||||||||| ||||||||| | |||| ||||| |||||||||||||||||    
T  25172683 tgtccgacattgacacgacaccgacacatataattacattaaaatatgtaattttatcaaattatta 25172749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 324
Target Start/End: Original strand, 29510289 - 29510395
Alignment:
Q  219 tgtccgacatcga-acaacaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtcatgtc 317  Q
    ||||||||| ||| || |||||||||  | |||||||||| |||| ||||||||| |||||||||||   | ||||| |||||| | |||||||| ||||    
T  29510289 tgtccgacaccgacactacaccgacacttgtaattatactgaattttgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtc 29510388  T
Q  318 tggtgtc 324  Q
     ||||||    
T  29510389 cggtgtc 29510395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 284
Target Start/End: Original strand, 2572058 - 2572107
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    |||||||||  | |||||| |||||||||||||||||| |||||||||||    
T  2572058 acaccgacacttgtaattacactaaattatgtgattttttcaaattatta 2572107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 284
Target Start/End: Complemental strand, 8343029 - 8342980
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    |||||||||  | |||||| |||||||||||||||||| |||||||||||    
T  8343029 acaccgacacttgtaattacactaaattatgtgattttttcaaattatta 8342980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 285
Target Start/End: Complemental strand, 11803319 - 11803266
Alignment:
Q  232 acaacaccgacatatataattatactaaattatgtgattttatcaaattattaa 285  Q
    |||||||| ||| ||||||||| ||| |||||||||||||| | ||||||||||    
T  11803319 acaacaccaacacatataattacactgaattatgtgattttcttaaattattaa 11803266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 285
Target Start/End: Original strand, 12936510 - 12936543
Alignment:
Q  252 tatactaaattatgtgattttatcaaattattaa 285  Q
    |||| |||||||||||||||||||||||||||||    
T  12936510 tataataaattatgtgattttatcaaattattaa 12936543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 284
Target Start/End: Complemental strand, 12985449 - 12985400
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    |||||||||||||| |||| | | |||||||||||||| |||||||||||    
T  12985449 acaccgacatatatgattacattgaattatgtgattttctcaaattatta 12985400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 284
Target Start/End: Complemental strand, 20873126 - 20873077
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    |||||||||  | |||||| |||||||||||||||||| |||||||||||    
T  20873126 acaccgacacttgtaattacactaaattatgtgattttttcaaattatta 20873077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 284
Target Start/End: Complemental strand, 34897138 - 34897093
Alignment:
Q  239 cgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    ||||| ||||||||| ||| |||||||||||||| |||||||||||    
T  34897138 cgacacatataattacactgaattatgtgattttctcaaattatta 34897093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 284
Target Start/End: Complemental strand, 8343360 - 8343324
Alignment:
Q  248 taattatactaaattatgtgattttatcaaattatta 284  Q
    |||||| |||||||||||||||||| |||||||||||    
T  8343360 taattacactaaattatgtgattttttcaaattatta 8343324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 285
Target Start/End: Complemental strand, 13018328 - 13018288
Alignment:
Q  245 atataattatactaaattatgtgattttatcaaattattaa 285  Q
    |||| |||| |||||||||||||||||| ||||||||||||    
T  13018328 atatcattacactaaattatgtgattttgtcaaattattaa 13018288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 303
Target Start/End: Complemental strand, 27101552 - 27101504
Alignment:
Q  255 actaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaat 303  Q
    |||||||||||||||||| |||||||||||  || ||||| ||||||||    
T  27101552 actaaattatgtgattttttcaaattattagcggtgtcggcgtgtcaat 27101504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 284
Target Start/End: Original strand, 31236580 - 31236628
Alignment:
Q  236 caccgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    |||||||| ||||||||| | | |||||||||||||| |||||||||||    
T  31236580 caccgacacatataattacattgaattatgtgattttctcaaattatta 31236628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 235 - 293
Target Start/End: Original strand, 5775360 - 5775418
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcg 293  Q
    ||||||||| ||||||||| ||| |||||||||||||| ||||||||||||||| ||||    
T  5775360 acaccgacacatataattacacttaattatgtgattttctcaaattattaatggtgtcg 5775418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 324
Target Start/End: Original strand, 35157987 - 35158076
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtcatgtctggtgtc 324  Q
    |||||||||  |||||||| ||||||||||||||||||  |||||||||| | ||||||| |||||| | |||||||  |||| ||||||    
T  35157987 acaccgacacttataattacactaaattatgtgatttttccaaattattagttgcgtcggcgtgtcagtgtccgtgttgtgtccggtgtc 35158076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 312
Target Start/End: Complemental strand, 40742644 - 40742571
Alignment:
Q  239 cgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtc 312  Q
    ||||| ||||||||| |||| ||||| ||||||| ||||||||||||||| ||||| || ||||| ||||||||    
T  40742644 cgacacatataattacactagattatatgattttctcaaattattaatggtgtcggcgtttcaatgtccgtgtc 40742571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 245 - 320
Target Start/End: Complemental strand, 903969 - 903894
Alignment:
Q  245 atataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtcatgtctgg 320  Q
    ||||||||| ||| |||||||||||||| |||||||||||| || | |||||||||| | ||||| | ||||||||    
T  903969 atataattacactgaattatgtgattttctcaaattattaacggtgccggtgtgtcagtgtccgttttatgtctgg 903894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 245 - 328
Target Start/End: Complemental strand, 36635371 - 36635288
Alignment:
Q  245 atataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtcatgtctggtgtctgtg 328  Q
    ||||||||| ||| |||||||||||||| ||||||||||| ||| || || |||||| | |||| ||| |||| ||||||||||    
T  36635371 atataattacactgaattatgtgattttctcaaattattagtggtgttggcgtgtcagtgtccgagtcgtgtccggtgtctgtg 36635288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 326
Target Start/End: Original strand, 40179638 - 40179729
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtcatgtctggtgtctg 326  Q
    ||||||||  ||||||||| ||| |||||||||||||| ||||| ||||||||| |||   |||||| | ||||||||||||  ||||||||    
T  40179638 acaccgacgcatataattacactgaattatgtgattttttcaaactattaatggtgtcaacgtgtcagtgtccgtgtcatgttcggtgtctg 40179729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 285
Target Start/End: Original strand, 21720509 - 21720559
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattattaa 285  Q
    ||||||||||||||| ||| | |||||||| ||||||||||||||||||||    
T  21720509 acaccgacatatatagttacattaaattatatgattttatcaaattattaa 21720559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 284
Target Start/End: Original strand, 8423720 - 8423769
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    |||||||||| |||||||| ||| |||||||||||||| |||||||||||    
T  8423720 acaccgacatttataattacactgaattatgtgattttctcaaattatta 8423769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 259 - 324
Target Start/End: Original strand, 20521875 - 20521940
Alignment:
Q  259 aattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtcatgtctggtgtc 324  Q
    ||||||||||||||||||||||||||  ||  |||| |||||| | |||||||| |||||||||||    
T  20521875 aattatgtgattttatcaaattattatcggtatcggcgtgtcagtgtccgtgtcgtgtctggtgtc 20521940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 324
Target Start/End: Original strand, 23292988 - 23293077
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtcatgtctggtgtc 324  Q
    |||||||||  | |||||||||| |||||||||||||| |||||||||||   | ||||| |||||| | |||||||| |||| ||||||    
T  23292988 acaccgacacttgtaattatactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtc 23293077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 324
Target Start/End: Complemental strand, 33950193 - 33950104
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtcatgtctggtgtc 324  Q
    ||||||||| |||| |||| | |||||||||||||||| |||||||||||  ||||| |  |||||| | | ||||| ||||||||||||    
T  33950193 acaccgacacatatgattacattaaattatgtgattttctcaaattattagcggcgttgaagtgtcagtgttcgtgttatgtctggtgtc 33950104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 283
Target Start/End: Complemental strand, 9996897 - 9996849
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattatt 283  Q
    ||||||| | ||||||||||||| |||||||||||||| ||||||||||    
T  9996897 acaccgagacatataattatactgaattatgtgattttctcaaattatt 9996849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 324
Target Start/End: Original strand, 27706192 - 27706268
Alignment:
Q  248 taattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtcatgtctggtgtc 324  Q
    |||||| |||||||||||||||||| | ||||||||||| | ||||  |||||| | ||| |||| |||||||||||    
T  27706192 taattacactaaattatgtgatttttttaaattattaattgtgtcgacgtgtcagtgtccctgtcgtgtctggtgtc 27706268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 235 - 286
Target Start/End: Original strand, 6485613 - 6485664
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattattaat 286  Q
    |||||||||  | |||||| |||||||||||||||||| |||||||||||||    
T  6485613 acaccgacacttgtaattacactaaattatgtgattttttcaaattattaat 6485664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 294
Target Start/End: Original strand, 21539877 - 21539928
Alignment:
Q  243 atatataattatactaaattatgtgattttatcaaattattaatggcgtcgg 294  Q
    ||||||||||| |||||||||| ||||||| | ||||||||||||| |||||    
T  21539877 atatataattacactaaattatatgattttcttaaattattaatggtgtcgg 21539928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 301
Target Start/End: Original strand, 12895276 - 12895342
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtca 301  Q
    |||||||||  |||||||| || ||||||||||||||| ||||||||||| | | ||||| ||||||    
T  12895276 acaccgacacttataattacacaaaattatgtgattttttcaaattattatttgtgtcggcgtgtca 12895342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 319
Target Start/End: Original strand, 22440612 - 22440686
Alignment:
Q  245 atataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtcatgtctg 319  Q
    ||||||||| ||| |||||||||||||| |||||||||||| || |||| ||| ||| | ||| |||| ||||||    
T  22440612 atataattacactgaattatgtgattttctcaaattattaacggtgtcgatgtatcagtgtccatgtcgtgtctg 22440686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 284
Target Start/End: Original strand, 7214524 - 7214573
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    ||||||||  ||||||||| | |||||||||||||||| |||||||||||    
T  7214524 acaccgacgcatataattacattaaattatgtgattttctcaaattatta 7214573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 328
Target Start/End: Complemental strand, 19482701 - 19482632
Alignment:
Q  259 aattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtcatgtctggtgtctgtg 328  Q
    ||||||||||| || ||||||||||| | | ||||| |||||| | || ||||| |||||||||||||||    
T  19482701 aattatgtgatattttcaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgtctggtgtctgtg 19482632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 300
Target Start/End: Original strand, 36409514 - 36409578
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtc 300  Q
    |||||||||  |||||||| |||||||||||||| ||| || |||||||||||| ||||| |||||    
T  36409514 acaccgacacctataattacactaaattatgtgactttttc-aattattaatggtgtcggcgtgtc 36409578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 300
Target Start/End: Original strand, 36423680 - 36423744
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtc 300  Q
    |||||||||  |||||||| |||||||||||||| ||| || |||||||||||| ||||| |||||    
T  36423680 acaccgacacctataattacactaaattatgtgactttttc-aattattaatggtgtcggcgtgtc 36423744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 284
Target Start/End: Original strand, 54580025 - 54580074
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    |||||||||  |||||||| ||| |||||||||||||| |||||||||||    
T  54580025 acaccgacacttataattacactgaattatgtgattttttcaaattatta 54580074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 303
Target Start/End: Original strand, 2361977 - 2362045
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaat 303  Q
    |||||||||  | |||||| |||||||||||| ||||| |||||||||||   | ||||||||||||||    
T  2361977 acaccgacacttttaattacactaaattatgtaattttttcaaattattagctgtgtcggtgtgtcaat 2362045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 235 - 285
Target Start/End: Original strand, 7614417 - 7614467
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattattaa 285  Q
    ||||||||||||||||||||||| |||||||||||||| | ||||||||||    
T  7614417 acaccgacatatataattatactgaattatgtgattttcttaaattattaa 7614467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 284
Target Start/End: Complemental strand, 11666001 - 11665952
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    ||||||||| ||||||||| |||||||| |||||||||||||||||||||    
T  11666001 acaccgacacatataattacactaaattgtgtgattttatcaaattatta 11665952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 284
Target Start/End: Complemental strand, 28678360 - 28678311
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    ||||||||| ||| |||||||||||||||||||||||||| |||||||||    
T  28678360 acaccgacacatacaattatactaaattatgtgattttattaaattatta 28678311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 260 - 328
Target Start/End: Original strand, 12674528 - 12674596
Alignment:
Q  260 attatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtcatgtctggtgtctgtg 328  Q
    ||||| ||||||| |||||||||||   | |||||||||||||| |||||||| |||||||||||||||    
T  12674528 attatttgattttctcaaattattagcagtgtcggtgtgtcaatgtccgtgtcgtgtctggtgtctgtg 12674596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 247 - 327
Target Start/End: Complemental strand, 25064954 - 25064874
Alignment:
Q  247 ataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtcatgtctggtgtctgt 327  Q
    ||||||| |||||||||||||||||| |||||| ||||  || ||||| |||||||| || ||||| |||| |||||||||    
T  25064954 ataattacactaaattatgtgattttttcaaatcattagcggtgtcggcgtgtcaatgtctgtgtcgtgtccggtgtctgt 25064874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 240 - 312
Target Start/End: Original strand, 32804547 - 32804619
Alignment:
Q  240 gacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtc 312  Q
    |||| ||||||||| |||||||||||||||||| |||||||||||| || |||||  |||||||  |||||||    
T  32804547 gacacatataattacactaaattatgtgattttctcaaattattaacggtgtcggcatgtcaatgcccgtgtc 32804619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 306
Target Start/End: Complemental strand, 4201453 - 4201382
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatc 306  Q
    ||||| ||||||||||||| ||| |||||||||||||| |||||||||||| || || ||| | ||||||||    
T  4201453 acaccaacatatataattacacttaattatgtgattttttcaaattattaacggtgttggtatatcaatatc 4201382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 16789096 - 16788977
Alignment:
Q  209 acatgtgtcatgtccgacatcga-acaacaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatcc 307  Q
    |||||||||||||||||||  || || ||||| |||  |||||||| ||| |||||| ||||||| | ||||||||||     ||||||| ||| |||||    
T  16789096 acatgtgtcatgtccgacactgacacgacaccaacacttataattacactgaattatatgatttttttaaattattaactatatcggtgtatcagtatcc 16788997  T
Q  308 gtgtcatgtctggtgtctgt 327  Q
    ||||||| ||||||||||||    
T  16788996 gtgtcatatctggtgtctgt 16788977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 312
Target Start/End: Complemental strand, 29508503 - 29508424
Alignment:
Q  233 caacaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtc 312  Q
    ||||| ||||| ||||||||| ||| |||||| ||||||| ||||||||||| |||  ||||||||||||| ||| ||||    
T  29508503 caacatcgacacatataattacactgaattatatgattttttcaaattattagtggtatcggtgtgtcaatgtccatgtc 29508424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 297
Target Start/End: Complemental strand, 7928507 - 7928445
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgt 297  Q
    ||||||||| ||||||||| ||| |||||||||||||| |||||||||||  || ||||||||    
T  7928507 acaccgacacatataattacactgaattatgtgattttttcaaattattagcggtgtcggtgt 7928445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 306
Target Start/End: Original strand, 8039810 - 8039908
Alignment:
Q  209 acatgtgtcatgtccgacatcga-acaacaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatc 306  Q
    |||||| |||||||||||| ||| || ||||||||| ||||||||| ||| |||||| | ||||| |||||||||||  || || || |||||||||||    
T  8039810 acatgtctcatgtccgacaccgacacgacaccgacacatataattacactgaattatataattttctcaaattattagcggtgttggcgtgtcaatatc 8039908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 317
Target Start/End: Complemental strand, 8383314 - 8383232
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtcatgtc 317  Q
    |||||||||  |||||||| ||| |||||| ||||||| |||||||||||  || ||||| |||||||| |||||||| ||||    
T  8383314 acaccgacacttataattacactgaattatatgattttctcaaattattagcggtgtcggcgtgtcaatgtccgtgtcgtgtc 8383232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 310
Target Start/End: Complemental strand, 12704054 - 12703989
Alignment:
Q  245 atataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtg 310  Q
    ||||||||| ||| ||||||||| |||| ||||||||||| ||| ||||| ||||| |||||||||    
T  12704054 atataattacactgaattatgtgcttttctcaaattattagtggtgtcggcgtgtccatatccgtg 12703989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 301
Target Start/End: Original strand, 17005618 - 17005687
Alignment:
Q  232 acaacaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtca 301  Q
    ||||||||||||  |||||||| ||| |||||| ||||||||||||||||||| ||| || |||| ||||    
T  17005618 acaacaccgacacttataattacactgaattatatgattttatcaaattattagtggtgttggtgagtca 17005687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 300
Target Start/End: Complemental strand, 18427006 - 18426941
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtc 300  Q
    ||||||||||||||||||| ||  |||||||||||||| | ||||||||| ||| ||||| |||||    
T  18427006 acaccgacatatataattacaccgaattatgtgattttttgaaattattagtggtgtcggcgtgtc 18426941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 284
Target Start/End: Original strand, 49505156 - 49505205
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    |||| |||| ||||||||| |||||||||||||||||| |||||||||||    
T  49505156 acactgacacatataattacactaaattatgtgattttctcaaattatta 49505205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 323
Target Start/End: Complemental strand, 24633799 - 24633736
Alignment:
Q  259 aattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtcatgtctggtgt 323  Q
    |||||||||||||| ||||||||||| ||| |||||  |||| || |||||||||||||||||||    
T  24633799 aattatgtgattttctcaaattattagtggtgtcggcatgtc-atgtccgtgtcatgtctggtgt 24633736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 245 - 284
Target Start/End: Original strand, 11313812 - 11313851
Alignment:
Q  245 atataattatactaaattatgtgattttatcaaattatta 284  Q
    ||||||||| |||||||||||||||||| |||||||||||    
T  11313812 atataattacactaaattatgtgattttctcaaattatta 11313851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 245 - 312
Target Start/End: Original strand, 11493373 - 11493440
Alignment:
Q  245 atataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtc 312  Q
    ||||||||| ||| |||||||||||||| ||| ||||||| ||| ||||  |||||||| ||||||||    
T  11493373 atataattacactgaattatgtgattttctcacattattagtggtgtcgacgtgtcaatgtccgtgtc 11493440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 246 - 317
Target Start/End: Original strand, 14840304 - 14840375
Alignment:
Q  246 tataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtcatgtc 317  Q
    |||||||| ||| |||||||||||||| | ||||||||||||| || || |||||  |||||||||| ||||    
T  14840304 tataattacactgaattatgtgattttctgaaattattaatggtgttggcgtgtcggtatccgtgtcgtgtc 14840375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 235 - 286
Target Start/End: Original strand, 15314878 - 15314929
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattattaat 286  Q
    ||||| ||| ||||||||| |||||||||||||||||| |||||||| ||||    
T  15314878 acaccaacacatataattacactaaattatgtgattttttcaaattaataat 15314929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 245 - 300
Target Start/End: Original strand, 16192762 - 16192817
Alignment:
Q  245 atataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtc 300  Q
    ||||||||| ||| |||||||| ||||| |||||||||||| || |||||||||||    
T  16192762 atataattacactgaattatgttattttctcaaattattaacggtgtcggtgtgtc 16192817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 301
Target Start/End: Complemental strand, 26290433 - 26290362
Alignment:
Q  230 gaacaacaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtca 301  Q
    |||| |||| |||| ||||||||| ||  || ||||||||||| ||||||||||||||| ||||| ||||||    
T  26290433 gaacgacactgacacatataattaaaccgaactatgtgattttctcaaattattaatggtgtcggcgtgtca 26290362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 284
Target Start/End: Complemental strand, 1509596 - 1509547
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    |||||||||  | |||||| |||||||||||||||||| |||||||||||    
T  1509596 acaccgacacttgtaattacactaaattatgtgattttttcaaattatta 1509547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 324
Target Start/End: Original strand, 8587023 - 8587112
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtcatgtctggtgtc 324  Q
    |||||||||  | |||||| ||| |||||||||||||| |||||||| ||   | ||||| |||||| | ||||||||||||| ||||||    
T  8587023 acaccgacacttgtaattacacttaattatgtgattttttcaaattactagatgtgtcggcgtgtcagtgtccgtgtcatgtccggtgtc 8587112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 272
Target Start/End: Complemental strand, 8842386 - 8842349
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgatttt 272  Q
    ||||||||||||||||||| || |||||||||||||||    
T  8842386 acaccgacatatataattacaccaaattatgtgatttt 8842349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 285
Target Start/End: Original strand, 10268501 - 10268538
Alignment:
Q  248 taattatactaaattatgtgattttatcaaattattaa 285  Q
    |||||| |||||||||||||||||| ||||||||||||    
T  10268501 taattacactaaattatgtgattttttcaaattattaa 10268538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 284
Target Start/End: Original strand, 10690260 - 10690313
Alignment:
Q  231 aacaacaccgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    ||||| ||||||| ||||||||| ||| |||||||||||||| ||| |||||||    
T  10690260 aacaataccgacaaatataattacactgaattatgtgattttctcagattatta 10690313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 284
Target Start/End: Complemental strand, 15544738 - 15544701
Alignment:
Q  247 ataattatactaaattatgtgattttatcaaattatta 284  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  15544738 ataattatacagaattatgtgattttatcaaattatta 15544701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 324
Target Start/End: Original strand, 15796296 - 15796385
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtcatgtctggtgtc 324  Q
    |||||||||  | |||||| ||| |||||| ||||||| ||||||||||||  | ||||| |||||| | |||||||| |||| ||||||    
T  15796296 acaccgacaattgtaattacactgaattatatgattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtc 15796385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 284
Target Start/End: Original strand, 27277852 - 27277889
Alignment:
Q  247 ataattatactaaattatgtgattttatcaaattatta 284  Q
    ||||||| |||||||||||||||||| |||||||||||    
T  27277852 ataattacactaaattatgtgattttctcaaattatta 27277889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 284
Target Start/End: Complemental strand, 45451610 - 45451561
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    ||||||||| |||| |||||||| || ||||||||||| |||||||||||    
T  45451610 acaccgacacatattattatactgaagtatgtgattttctcaaattatta 45451561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 284
Target Start/End: Complemental strand, 55401132 - 55401083
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    |||||||||  | |||||| |||||||||||||||||| |||||||||||    
T  55401132 acaccgacacttgtaattacactaaattatgtgattttttcaaattatta 55401083  T

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Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 301
Target Start/End: Complemental strand, 1438851 - 1438795
Alignment:
Q  245 atataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtca 301  Q
    ||||||||||||| |||||||||||||| ||||||| |||  |  ||||||||||||    
T  1438851 atataattatactgaattatgtgattttctcaaattgttagcgatgtcggtgtgtca 1438795  T

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Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 284
Target Start/End: Original strand, 21257001 - 21257037
Alignment:
Q  248 taattatactaaattatgtgattttatcaaattatta 284  Q
    |||||||||| |||||||||||||| |||||||||||    
T  21257001 taattatactgaattatgtgattttttcaaattatta 21257037  T

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Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 284
Target Start/End: Complemental strand, 34910397 - 34910325
Alignment:
Q  213 gtgtcatgtccgacatcga-acaacaccgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    ||||||||||||||| ||| || ||||||||   | |||||| ||| |||||||||||||| |||||||||||    
T  34910397 gtgtcatgtccgacaccgatacgacaccgactcttgtaattacactgaattatgtgattttttcaaattatta 34910325  T

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Target: scaffold0036 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 294
Target Start/End: Original strand, 9749 - 9808
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcgg 294  Q
    ||||||||| ||||||||| ||| ||||| |||||||| ||||||||||| |||||||||    
T  9749 acaccgacacatataattacactgaattaagtgattttctcaaattattagtggcgtcgg 9808  T

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Target: scaffold0027 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 317
Target Start/End: Complemental strand, 46739 - 46657
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtcatgtc 317  Q
    |||||||||| | |||||| ||| |||||||||||||| ||||||||||||  | ||||| |||||| | |||||||| ||||    
T  46739 acaccgacatttgtaattacactgaattatgtgattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtc 46657  T

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Target: scaffold0697 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 300
Target Start/End: Complemental strand, 1701 - 1636
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtc 300  Q
    |||||||||  ||||||||||| ||||||| ||||||| |||||||||||| || ||||| |||||    
T  1701 acaccgacacttataattataccaaattatatgattttctcaaattattaacggtgtcggcgtgtc 1636  T

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Target: scaffold0122 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 272
Target Start/End: Complemental strand, 7580 - 7540
Alignment:
Q  232 acaacaccgacatatataattatactaaattatgtgatttt 272  Q
    |||||| |||||| |||||||||||||||||||||||||||    
T  7580 acaacatcgacatttataattatactaaattatgtgatttt 7540  T

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Target: scaffold0168 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 237 - 324
Target Start/End: Complemental strand, 21098 - 21011
Alignment:
Q  237 accgacatatataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtcatgtctggtgtc 324  Q
    ||||||| ||||||||||||  | |||||||||||| ||||||||||||  | ||| |  ||||| | |||||||| |||||||||||    
T  21098 accgacacatataattataccgacttatgtgattttctcaaattattaaccgtgtcagcatgtcagtgtccgtgtcgtgtctggtgtc 21011  T

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Target: scaffold0044 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 213 - 283
Target Start/End: Complemental strand, 53260 - 53189
Alignment:
Q  213 gtgtcatgtccgacatcga-acaacaccgacatatataattatactaaattatgtgattttatcaaattatt 283  Q
    ||||||||||||||| ||| ||  ||||||||  |||||||| ||| |||||||||||||| ||||||||||    
T  53260 gtgtcatgtccgacaccgacacggcaccgacacttataattacactgaattatgtgattttctcaaattatt 53189  T

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Target: scaffold0024 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 246 - 285
Target Start/End: Original strand, 68255 - 68294
Alignment:
Q  246 tataattatactaaattatgtgattttatcaaattattaa 285  Q
    ||||||||||||||||||| ||||||| ||||||||||||    
T  68255 tataattatactaaattatatgattttctcaaattattaa 68294  T

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Target: scaffold0003 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 247 - 330
Target Start/End: Complemental strand, 241639 - 241556
Alignment:
Q  247 ataattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtcatgtctggtgtctgtgct 330  Q
    ||||||| ||||||||||||||||||  ||||||||||   | ||||| |||||| | |||||||| |||| |||||| |||||    
T  241639 ataattacactaaattatgtgatttttccaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgct 241556  T

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Target: scaffold0236 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 285
Target Start/End: Original strand, 25770 - 25820
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattattaa 285  Q
    |||||||||  |||||||| |||||||||||||||||| || |||||||||    
T  25770 acaccgacacttataattacactaaattatgtgattttctctaattattaa 25820  T

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Target: scaffold0306 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 324
Target Start/End: Complemental strand, 13433 - 13368
Alignment:
Q  259 aattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtcatgtctggtgtc 324  Q
    |||||||||||||| ||||||||||| | | ||||| |||||| | |||||||||| || ||||||    
T  13433 aattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgtccgtgtcatctccggtgtc 13368  T

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Target: scaffold0152 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 324
Target Start/End: Original strand, 21894 - 21959
Alignment:
Q  259 aattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtcatgtctggtgtc 324  Q
    |||||||||||||| ||||||||||| | | ||||| |||||| | |||||||||| || ||||||    
T  21894 aattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgtccgtgtcatctccggtgtc 21959  T

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Target: scaffold0020 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 284
Target Start/End: Original strand, 135314 - 135363
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    ||||||||| ||||||||| ||  |||||||||||||| |||||||||||    
T  135314 acaccgacacatataattacacagaattatgtgattttctcaaattatta 135363  T

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Target: scaffold0011 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 284
Target Start/End: Original strand, 17751 - 17800
Alignment:
Q  235 acaccgacatatataattatactaaattatgtgattttatcaaattatta 284  Q
    |||||||||  | |||||| |||||||||||||||||| |||||||||||    
T  17751 acaccgacacttgtaattacactaaattatgtgattttttcaaattatta 17800  T

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Target: scaffold0722 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 284
Target Start/End: Original strand, 7047 - 7083
Alignment:
Q  248 taattatactaaattatgtgattttatcaaattatta 284  Q
    ||||||||||||||||||| ||||| |||||||||||    
T  7047 taattatactaaattatgtaattttttcaaattatta 7083  T

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Target: scaffold0223 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 324
Target Start/End: Complemental strand, 20216 - 20140
Alignment:
Q  248 taattatactaaattatgtgattttatcaaattattaatggcgtcggtgtgtcaatatccgtgtcatgtctggtgtc 324  Q
    |||||| ||| |||||||||||||| |||||||||||   | ||||| |||||| | |||||||| |||| ||||||    
T  20216 taattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtc 20140  T

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