View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2210_low_46 (Length: 238)
Name: NF2210_low_46
Description: NF2210
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2210_low_46 |
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Alignment Details
Target: chr1 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 506457 - 506235
Alignment:
| Q |
1 |
acttcacatcaaaacatcacttgtctgagagtcttgtaatggtcccagaatcacttaaacctctacaaaaaccccacttaaaagaagactctttcatagg |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
506457 |
acttcacatcaaaacatcacttgtctgagagtcttgtaatggtcccagaatcacttaaacctctacaaaaaccccacttaaaagaagactctttcagagg |
506358 |
T |
|
| Q |
101 |
gatcagagttctgaatctgatatgaaaagtatatggcagttgattgatacaacaaactgttgtccaaacctaataacacctttagtataatacacacact |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
506357 |
gatcagagttctgaatctgatatgaaaagtatatggcagttgattgatacaacaaactgttctccaaacctaataacacctttagtataatacacacact |
506258 |
T |
|
| Q |
201 |
ggttaggaccacaattcttgttg |
223 |
Q |
| |
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||||||||||||||||||||||| |
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| T |
506257 |
ggttaggaccacaattcttgttg |
506235 |
T |
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