View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2211_high_20 (Length: 338)

Name: NF2211_high_20
Description: NF2211
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2211_high_20
NF2211_high_20
[»] chr8 (1 HSPs)
chr8 (33-329)||(41308557-41308855)


Alignment Details
Target: chr8 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 33 - 329
Target Start/End: Original strand, 41308557 - 41308855
Alignment:
Q  33 catgatttcgaaccggattctctcaaatattcaatcatgtaattaaaacataatgtatcattaatctcatttatatagtttcgtccnnnnnnnnttaatt 132  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||    
T  41308557 catgatttcgaaccggattctctcaaatattcaatcatgtaattaaaacataatgtatcattaatctcatttatatagtttcgtccaaaaaaaattaatt 41308656  T
Q  133 tttataatacaaatcatctttattctaattatactacaagtaattatatatcacaagaacaa-tcaacataaaa-aataaatgctaagatgctaaacact 230  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  41308657 tttataatacaaatcacctttattctaattatactacaagtaattatatatcacaagaacaaatcaacataaaaaaataaatgctaagatgctaaacact 41308756  T
Q  231 cgtataattttgaacggacaaggactttctatcttttttgaaggaaaaagtagagtgattttagacaaaattaagataaactataagagatgatgatgt 329  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41308757 cgtataattttgaacggacaaggactttctatcttttttgaaggaaaaagtagagtgattttagacaaaattaagataaactataagagatgatgatgt 41308855  T

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