View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2211_high_33 (Length: 266)
Name: NF2211_high_33
Description: NF2211
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2211_high_33 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 17 - 266
Target Start/End: Complemental strand, 5047442 - 5047193
Alignment:
| Q |
17 |
aaaatctctggatgtggaagcaattggtagccaggtttatgatcttatatatccaatcaatttacttgagatcaatgcttgcagtgttataacaatatca |
116 |
Q |
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| T |
5047442 |
aaaatctctggatgtggaagcaattggtagccaggtttatgatcttatatatccaatcaatttacttgagatcaatgcttgcagtgttataacaatatca |
5047343 |
T |
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| Q |
117 |
gtatttaaacaccttgcattttagattacagatgcagttcttgcaaaggaggccacagttgctgactatatcaaaattgtacttcctcttcttttgaaaa |
216 |
Q |
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| T |
5047342 |
gtatttaaacaccttgcattttagattacagatgcagttcttgcaaaggaggccacagttgctgactatatcaaaattgtacttcctcttcttttgaaaa |
5047243 |
T |
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| Q |
217 |
atagagctgttcacttccttggatatgcaaatcgacttggttttgatcct |
266 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5047242 |
atagagttgttcacttccttggatatgcaaatcgacttggttttgatcct |
5047193 |
T |
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