View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2211_low_42 (Length: 249)
Name: NF2211_low_42
Description: NF2211
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2211_low_42 |
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Alignment Details
Target: chr2 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 26808671 - 26808433
Alignment:
| Q |
1 |
ttaacagttaatactcacttttcagtgccaaatattgtaatagtatcaaactggaatctgagtttaaaaataatgcaagatgtctatggaagtaaaaaat |
100 |
Q |
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| T |
26808671 |
ttaacaattaatactcacttttcagtgccaaatattgtaatagtatcaaactggaatctgagtttaaaaataatgcaagatgtctatggaagtaaaaaat |
26808572 |
T |
|
| Q |
101 |
gtgtatagggtgtattggaatctgtaccaattggaacaatggatctgtcaaaaagaaaaggaaggacgaaatccatattttgattttctccattaaacaa |
200 |
Q |
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| T |
26808571 |
gtgta--gggtgtattggaatctgtaccaattggaacaatagatctgtcaaaaagaaaaggaaggaagaaatccatattttgattttctccattaaacaa |
26808474 |
T |
|
| Q |
201 |
gtcactaataccaaacattgatgtcagtttatccctttgct |
241 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |
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| T |
26808473 |
gtcactaataccaaacattgatgtcagtttatccctttgct |
26808433 |
T |
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