View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2212_high_6 (Length: 291)
Name: NF2212_high_6
Description: NF2212
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2212_high_6 |
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Alignment Details
Target: chr5 (Bit Score: 264; Significance: 1e-147; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 17 - 280
Target Start/End: Complemental strand, 42672654 - 42672391
Alignment:
| Q |
17 |
taaacaactcacacaagtggggtgtggttatcaaaaatatattcaataatacttactaggatccacttctgttgtcatggcagcacctctaaaataacaa |
116 |
Q |
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| T |
42672654 |
taaacaactcacacaagtggggtgtggttatcaaaaatatattcaataatacttactaggatccacttctgttgtcatggcagcacctctaaaataacaa |
42672555 |
T |
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| Q |
117 |
gaaccaccattgttcttgaatttctgaaagtaactgttaaaggcataagaagcatggtctttcaatgtgtttggaaaatagcaaggttggtcttgttgaa |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42672554 |
gaaccaccattgttcttgaatttctgaaagtaactgttaaaggcataagaagcatggtctttcaatgtgtttggaaaatagcaaggttggtcttgttgaa |
42672455 |
T |
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| Q |
217 |
ttttgctacaatctgcacctcctttcccacaagcccaattcaaggcatcctgcaaatcagagtc |
280 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42672454 |
ttttgctacaatctgcacctcctttcccacaagcccaattcaaggcatcctgcaaatcagagtc |
42672391 |
T |
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