View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2212_low_3 (Length: 436)
Name: NF2212_low_3
Description: NF2212
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2212_low_3 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 395; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 395; E-Value: 0
Query Start/End: Original strand, 10 - 436
Target Start/End: Complemental strand, 2452075 - 2451649
Alignment:
| Q |
10 |
agtgagatgaaaaaccaatgtgaggaaggaaacacatttggagaaggaagacataaacaagaaacatgatggtgcagtggtagatggagaattgcactag |
109 |
Q |
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| T |
2452075 |
agtgagatgaaaaaccaatgtgaggaaggaaacacatttggagaaggaagacataaacaagaaacatgatggtgcagtggtagatggagaattgcactag |
2451976 |
T |
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| Q |
110 |
tggatggtttatttggtttgtaaagctttatctttatgcaaaagatttgtattttgtgatgatgtcttcagaggaagagtgtaatataatgtaatgtgcc |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| |
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| T |
2451975 |
tggatggtttatttggtttgtaaagctttatctttatgcaaacgatttgtattttgtaatgatgtcttcagaggaagagtgtaatctaatgtaatgtgcc |
2451876 |
T |
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| Q |
210 |
atcatagattttgagtacaattagtgaattttgtttatgcttaactttgaaggaaagacatataatactctatgcgtttggtggacactaatagacagta |
309 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| |
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| T |
2451875 |
atcatagattttgagtacaattagtgaattttgtttatgcttaactttgaaggaaagacatataatactctattcgtttggtggacactcatagacagta |
2451776 |
T |
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| Q |
310 |
acaaactactctttccctaagtacaaggaaaataaagacttgtctctaaatatatataactatcatttcaaatcacaaaatacaattaattatttttata |
409 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
2451775 |
acaaactactctttccctaagtacaaggaaaatagagacttgtctctaaatatatataactatcatttcaaatcaccaaatacaattaattatttttata |
2451676 |
T |
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| Q |
410 |
tggttgttaatttagtaacaaatattt |
436 |
Q |
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| T |
2451675 |
tggttgttaatttaataacaaatattt |
2451649 |
T |
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