View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2213_low_5 (Length: 201)
Name: NF2213_low_5
Description: NF2213
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2213_low_5 |
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Alignment Details
Target: chr1 (Bit Score: 146; Significance: 4e-77; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 3981046 - 3981215
Alignment:
| Q |
1 |
agtagtaggtatcattccgtatttccattatatatcaaaaccaaaacaatataaaagtctctgattaaattaaacgtaaa-----cgttttcaattttga |
95 |
Q |
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| T |
3981046 |
agtagtaggtatcattccgtatttccattatatatcaaaaccaaaataatataaaagtctctgattaaattaaacgtaaactaaacgttttcaattttga |
3981145 |
T |
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| Q |
96 |
cgatcacataatgttcaaataagaagaaaattgttacttgggaagcatgtcagaaaattgtgcatcatct |
165 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3981146 |
cgatcacataatgttcaaataagaagaaaattgttacttgggaagcatgtcagaaaattgtgcatcatct |
3981215 |
T |
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