View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2215_low_12 (Length: 267)
Name: NF2215_low_12
Description: NF2215
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2215_low_12 |
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Alignment Details
Target: chr4 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 50338377 - 50338633
Alignment:
| Q |
1 |
tactacaggagacagaaacagatataagtatagatacttattaagagatgaggtattaaaacctcactattttatttaactatattagagatcttacttg |
100 |
Q |
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| T |
50338377 |
tactacaggagacagaaacagatataagtatagatacttattaagagatgaggtattaaaacctcactattttatttaactatattagagatcttacttg |
50338476 |
T |
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| Q |
101 |
cttcactatatgttagagaagattacatcattttgatgtgtacaagattaacaattatatcgtctattggaagagtcaaagccaccaaagatgatggatc |
200 |
Q |
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|| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
50338477 |
ctccactatatgttagagaagattacatcattttgatgtgtacaagattaataattataccgtctattggaagagtcaaagccaccaaagatgatggatc |
50338576 |
T |
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| Q |
201 |
cattaccattgcctttggtgtaaccagagttgtttataagacctttcatgttctgtg |
257 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
50338577 |
cattaccattgcctttggtgtaaccagagttgtttataagacctttcatgttttgtg |
50338633 |
T |
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