View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2215_low_25 (Length: 233)
Name: NF2215_low_25
Description: NF2215
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2215_low_25 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 13 - 233
Target Start/End: Complemental strand, 43534748 - 43534528
Alignment:
| Q |
13 |
tatacttctatattcagtggcttttctgtaacattcacagggatagagaacaagggggctgagttgttgttttcattttccaaacactaattttgaattg |
112 |
Q |
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| T |
43534748 |
tatacttctatattcagtggcttttctgtaacattcacagggatagagaacaagggggctgagttgttgttttcattttccaaacactaattttgaattg |
43534649 |
T |
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| Q |
113 |
attgacataagtttacatggaatggttagattatgatgttcgtgcgagtattggtgatttgaatgttgattcagattcagaacatatattatgtttcaag |
212 |
Q |
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| T |
43534648 |
attgaaataagtttacatggaatggttagattatgatgttcgtgcgagtattggcaatttgaatgttgattcagtttcagaacatatattatgtttcaag |
43534549 |
T |
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| Q |
213 |
tttgctgtgcatcatagattt |
233 |
Q |
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| T |
43534548 |
tttgctgtgcatcatagattt |
43534528 |
T |
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