View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2215_low_8 (Length: 408)
Name: NF2215_low_8
Description: NF2215
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2215_low_8 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 354; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 354; E-Value: 0
Query Start/End: Original strand, 30 - 408
Target Start/End: Original strand, 39924172 - 39924550
Alignment:
| Q |
30 |
tatacagaaaattttattgtcttcttgtctagctcaaaatagaaaatgatgccctacaaatttattcaagataggaatcacctccatttttggnnnnnnn |
129 |
Q |
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| T |
39924172 |
tatacagaaaattttattgtcttcttgtctagctcaaaatagaaaatgatgccctacaaatttattcaagataggaatcacctccatttttggaaaaaaa |
39924271 |
T |
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| Q |
130 |
ctatcacattcccttagattttgagattttcagcagaatccaaaggcacacttgcacaaatcaagttgatgcttacgtacttcttcttccaattgggcac |
229 |
Q |
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| T |
39924272 |
ctatcacattcccttagattttgagattttcagcagaatccaaaggcacacttgcacaaatcaagttgatgcttacgtacttcttcttccaattgggcac |
39924371 |
T |
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| Q |
230 |
ttcattttcctttgaatcatatgtctcagctcactaaactatccacatgctatagtcaataatataataattaattgtatatacaacacctcatcattta |
329 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39924372 |
ttcattttcctttgaatcatatgtctcagctcactaaactatccacatgctgtagtcaataatataataattaattgtatatacaacacctcatcattta |
39924471 |
T |
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| Q |
330 |
tctatatatattcatgttcagttttctattcctactcattagtgatctcatcagaatctggagaaagagttaactatac |
408 |
Q |
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| T |
39924472 |
tctatatatattcatgttcagttttctattcctactcattagtgatctcatcagaatctggagaaagagttaactatac |
39924550 |
T |
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