View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2217_low_8 (Length: 238)

Name: NF2217_low_8
Description: NF2217
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2217_low_8
NF2217_low_8
[»] chr6 (47 HSPs)
chr6 (1-68)||(19086587-19086655)
chr6 (1-72)||(14100113-14100185)
chr6 (1-66)||(9718280-9718346)
chr6 (1-66)||(19689153-19689219)
chr6 (1-66)||(34451330-34451396)
chr6 (1-68)||(32544697-32544765)
chr6 (1-67)||(12715081-12715147)
chr6 (5-66)||(13602595-13602657)
chr6 (1-66)||(16528960-16529026)
chr6 (1-66)||(18378691-18378757)
chr6 (1-66)||(19624399-19624465)
chr6 (1-66)||(29918440-29918506)
chr6 (1-57)||(15987631-15987688)
chr6 (1-68)||(19626262-19626328)
chr6 (1-67)||(22802561-22802623)
chr6 (2-68)||(13435970-13436037)
chr6 (1-67)||(17381867-17381934)
chr6 (4-66)||(21625540-21625602)
chr6 (1-66)||(7618057-7618123)
chr6 (1-66)||(15955124-15955190)
chr6 (1-66)||(24117265-24117331)
chr6 (1-62)||(24508005-24508067)
chr6 (1-66)||(26971856-26971922)
chr6 (67-119)||(7644848-7644901)
chr6 (2-66)||(19473243-19473307)
chr6 (1-57)||(20112369-20112426)
chr6 (1-65)||(16264819-16264879)
chr6 (1-66)||(18384075-18384141)
chr6 (4-67)||(12348564-12348626)
chr6 (4-64)||(15302612-15302672)
chr6 (1-63)||(21235533-21235591)
chr6 (1-64)||(3680912-3680976)
chr6 (1-64)||(20487550-20487614)
chr6 (1-66)||(20730372-20730433)
chr6 (15-66)||(26944002-26944053)
chr6 (1-66)||(17928240-17928304)
chr6 (1-66)||(12423661-12423727)
chr6 (163-204)||(7644768-7644809)
chr6 (1-66)||(18436011-18436076)
chr6 (1-64)||(23284999-23285063)
chr6 (4-66)||(7812442-7812504)
chr6 (4-66)||(16877655-16877718)
chr6 (1-32)||(19288954-19288985)
chr6 (1-31)||(5497434-5497464)
chr6 (1-66)||(21618674-21618740)
chr6 (5-57)||(23298387-23298438)
chr6 (4-66)||(25930882-25930942)
[»] chr2 (50 HSPs)
chr2 (1-68)||(38631385-38631453)
chr2 (1-66)||(18376547-18376613)
chr2 (1-66)||(22454593-22454659)
chr2 (1-66)||(40782902-40782968)
chr2 (1-67)||(10009370-10009436)
chr2 (1-66)||(21536852-21536918)
chr2 (1-66)||(22318043-22318109)
chr2 (1-66)||(23183984-23184050)
chr2 (1-66)||(23595241-23595307)
chr2 (1-66)||(28140237-28140303)
chr2 (1-68)||(17966750-17966818)
chr2 (4-66)||(25189787-25189850)
chr2 (1-66)||(9014971-9015037)
chr2 (1-66)||(19540829-19540895)
chr2 (1-66)||(25829535-25829601)
chr2 (1-67)||(26618704-26618769)
chr2 (4-66)||(20151654-20151716)
chr2 (4-66)||(22260839-22260902)
chr2 (5-66)||(24850269-24850331)
chr2 (1-66)||(28711316-28711382)
chr2 (1-66)||(38781811-38781877)
chr2 (1-66)||(41121352-41121417)
chr2 (1-66)||(22187728-22187788)
chr2 (2-68)||(19115562-19115627)
chr2 (4-66)||(24302551-24302612)
chr2 (1-68)||(31800483-31800551)
chr2 (1-66)||(18703209-18703273)
chr2 (1-67)||(24576480-24576546)
chr2 (1-67)||(28700814-28700881)
chr2 (1-66)||(13963613-13963679)
chr2 (1-66)||(20568351-20568417)
chr2 (1-66)||(22272565-22272630)
chr2 (1-66)||(24377500-24377566)
chr2 (1-66)||(34321505-34321571)
chr2 (1-65)||(30667420-30667485)
chr2 (1-67)||(31327558-31327625)
chr2 (1-67)||(31334279-31334346)
chr2 (1-66)||(33074674-33074740)
chr2 (2-65)||(30621619-30621684)
chr2 (2-65)||(30624240-30624305)
chr2 (1-66)||(1586639-1586708)
chr2 (4-67)||(24964123-24964187)
chr2 (1-67)||(22802905-22802972)
chr2 (1-66)||(35743690-35743756)
chr2 (1-66)||(45086738-45086804)
chr2 (1-66)||(18430536-18430600)
chr2 (1-42)||(39037286-39037327)
chr2 (2-54)||(44881587-44881639)
chr2 (15-66)||(6573741-6573793)
chr2 (1-33)||(14581886-14581918)
[»] scaffold0359 (1 HSPs)
scaffold0359 (1-67)||(5298-5365)
[»] chr3 (69 HSPs)
chr3 (1-67)||(38177345-38177412)
chr3 (1-70)||(14392659-14392729)
chr3 (1-66)||(16658300-16658365)
chr3 (1-66)||(3522700-3522766)
chr3 (1-66)||(20646590-20646656)
chr3 (5-66)||(22803758-22803820)
chr3 (1-66)||(28582543-28582609)
chr3 (1-66)||(52920841-52920907)
chr3 (1-68)||(47405107-47405175)
chr3 (1-66)||(12968782-12968846)
chr3 (1-66)||(18142510-18142576)
chr3 (1-66)||(46349485-46349551)
chr3 (2-66)||(17238611-17238676)
chr3 (2-66)||(20725535-20725599)
chr3 (1-64)||(11869521-11869585)
chr3 (1-64)||(53056387-53056451)
chr3 (1-71)||(16199459-16199529)
chr3 (1-67)||(49553144-49553211)
chr3 (1-66)||(15903636-15903702)
chr3 (1-66)||(16032916-16032981)
chr3 (1-66)||(12397552-12397616)
chr3 (5-68)||(13824472-13824536)
chr3 (1-62)||(20627146-20627203)
chr3 (1-66)||(40800261-40800322)
chr3 (4-66)||(2561620-2561683)
chr3 (4-66)||(14969754-14969817)
chr3 (1-66)||(17698002-17698066)
chr3 (16-66)||(21233264-21233315)
chr3 (1-67)||(31303825-31303892)
chr3 (1-66)||(49642435-49642502)
chr3 (1-66)||(6091168-6091234)
chr3 (1-66)||(11907897-11907963)
chr3 (1-66)||(12962758-12962824)
chr3 (1-66)||(19249065-19249130)
chr3 (1-66)||(24775156-24775222)
chr3 (1-66)||(25397919-25397985)
chr3 (5-66)||(41495413-41495475)
chr3 (3-66)||(4242855-4242918)
chr3 (5-60)||(13949126-13949184)
chr3 (1-64)||(18118323-18118387)
chr3 (3-66)||(33583700-33583764)
chr3 (3-66)||(33598320-33598384)
chr3 (4-66)||(22141183-22141246)
chr3 (1-66)||(512755-512821)
chr3 (17-66)||(12723910-12723960)
chr3 (1-66)||(15833829-15833895)
chr3 (1-66)||(15851375-15851441)
chr3 (1-66)||(29855862-29855928)
chr3 (1-39)||(47208145-47208183)
chr3 (1-66)||(12388528-12388593)
chr3 (3-66)||(19197519-19197581)
chr3 (14-66)||(33591200-33591253)
chr3 (4-66)||(6713507-6713568)
chr3 (1-66)||(13298024-13298091)
chr3 (1-72)||(14955894-14955966)
chr3 (1-67)||(5216425-5216492)
chr3 (17-66)||(9510562-9510610)
chr3 (17-66)||(9518537-9518585)
chr3 (1-66)||(29951098-29951161)
chr3 (1-66)||(30000252-30000315)
chr3 (5-66)||(37467741-37467804)
chr3 (2-68)||(46828507-46828574)
chr3 (1-66)||(2785530-2785596)
chr3 (5-66)||(11223986-11224048)
chr3 (1-31)||(23757906-23757936)
chr3 (1-61)||(26417349-26417408)
chr3 (5-66)||(2902909-2902970)
chr3 (3-66)||(14008024-14008086)
chr3 (1-29)||(28169687-28169715)
[»] scaffold0337 (2 HSPs)
scaffold0337 (1-66)||(15098-15164)
scaffold0337 (1-62)||(1298-1360)
[»] scaffold0324 (1 HSPs)
scaffold0324 (2-67)||(10375-10441)
[»] scaffold0120 (2 HSPs)
scaffold0120 (1-66)||(36384-36450)
scaffold0120 (1-66)||(42555-42621)
[»] scaffold0113 (1 HSPs)
scaffold0113 (1-66)||(3183-3249)
[»] scaffold0065 (1 HSPs)
scaffold0065 (1-66)||(2140-2206)
[»] chr8 (51 HSPs)
chr8 (1-66)||(39696614-39696680)
chr8 (5-66)||(19156614-19156676)
chr8 (1-66)||(20382052-20382118)
chr8 (1-66)||(22745899-22745965)
chr8 (1-66)||(23263259-23263325)
chr8 (1-66)||(29693746-29693812)
chr8 (1-66)||(17914888-17914953)
chr8 (2-66)||(18685068-18685133)
chr8 (2-66)||(18730633-18730698)
chr8 (1-66)||(16680962-16681028)
chr8 (5-66)||(20255225-20255287)
chr8 (1-66)||(21933328-21933394)
chr8 (1-64)||(18320849-18320913)
chr8 (1-68)||(19707937-19708004)
chr8 (4-67)||(43645220-43645283)
chr8 (5-67)||(17267904-17267967)
chr8 (1-67)||(33083293-33083360)
chr8 (1-66)||(16189428-16189494)
chr8 (1-66)||(17441479-17441545)
chr8 (1-66)||(17797851-17797917)
chr8 (5-66)||(18120780-18120842)
chr8 (1-66)||(24646766-24646832)
chr8 (1-64)||(602395-602457)
chr8 (1-57)||(17525395-17525452)
chr8 (1-64)||(45538113-45538177)
chr8 (1-66)||(18773062-18773126)
chr8 (4-70)||(19956000-19956066)
chr8 (4-66)||(23184898-23184961)
chr8 (1-66)||(15335698-15335764)
chr8 (1-66)||(15424763-15424829)
chr8 (1-66)||(15516067-15516133)
chr8 (1-66)||(18719395-18719458)
chr8 (1-57)||(17702155-17702212)
chr8 (1-54)||(18680227-18680280)
chr8 (4-66)||(23352745-23352806)
chr8 (1-66)||(2811249-2811316)
chr8 (1-66)||(22461282-22461346)
chr8 (4-66)||(30421097-30421160)
chr8 (1-66)||(3597985-3598051)
chr8 (1-66)||(9321016-9321082)
chr8 (1-66)||(24551726-24551792)
chr8 (1-42)||(19943666-19943707)
chr8 (1-68)||(26833485-26833551)
chr8 (2-42)||(18722313-18722353)
chr8 (1-66)||(24832710-24832777)
chr8 (1-32)||(32087900-32087931)
chr8 (1-67)||(40845025-40845092)
chr8 (1-33)||(1238098-1238130)
chr8 (1-29)||(7018016-7018044)
chr8 (1-66)||(21288827-21288896)
chr8 (1-66)||(21301446-21301515)
[»] chr7 (62 HSPs)
chr7 (1-66)||(13137583-13137649)
chr7 (1-66)||(21695803-21695869)
chr7 (2-66)||(30026325-30026390)
chr7 (5-68)||(10882831-10882895)
chr7 (1-68)||(13730367-13730435)
chr7 (2-68)||(13692774-13692841)
chr7 (1-66)||(2913280-2913346)
chr7 (1-66)||(5000513-5000579)
chr7 (1-66)||(9070006-9070072)
chr7 (1-66)||(13880537-13880603)
chr7 (1-66)||(14193512-14193578)
chr7 (1-66)||(22577679-22577745)
chr7 (1-66)||(28409467-28409533)
chr7 (5-66)||(39284270-39284332)
chr7 (2-66)||(15088923-15088988)
chr7 (1-64)||(4494906-4494970)
chr7 (1-68)||(9097897-9097964)
chr7 (1-67)||(44467483-44467550)
chr7 (1-66)||(15469900-15469966)
chr7 (1-66)||(19236673-19236739)
chr7 (1-66)||(23279699-23279765)
chr7 (2-66)||(13260283-13260348)
chr7 (5-68)||(13303257-13303321)
chr7 (1-68)||(23390686-23390754)
chr7 (1-68)||(24788485-24788553)
chr7 (1-67)||(2500458-2500525)
chr7 (2-66)||(9070088-9070148)
chr7 (1-68)||(13890621-13890687)
chr7 (1-66)||(33691384-33691451)
chr7 (2-55)||(11793341-11793395)
chr7 (1-66)||(13649132-13649198)
chr7 (5-66)||(16316235-16316297)
chr7 (1-66)||(30944017-30944083)
chr7 (1-66)||(30945050-30945116)
chr7 (1-66)||(33606119-33606185)
chr7 (1-66)||(9709498-9709559)
chr7 (15-66)||(11319851-11319903)
chr7 (1-68)||(41841963-41842031)
chr7 (1-66)||(7487539-7487603)
chr7 (1-67)||(13881029-13881095)
chr7 (1-71)||(16111536-16111607)
chr7 (4-66)||(16556465-16556528)
chr7 (4-66)||(16609134-16609197)
chr7 (1-67)||(28622025-28622092)
chr7 (1-66)||(332083-332149)
chr7 (1-66)||(14426946-14427012)
chr7 (1-66)||(19710658-19710724)
chr7 (1-66)||(35952329-35952395)
chr7 (3-66)||(12173983-12174047)
chr7 (5-63)||(12366414-12366471)
chr7 (1-64)||(13031748-13031812)
chr7 (1-66)||(2265190-2265256)
chr7 (1-66)||(15700949-15701015)
chr7 (3-66)||(14304045-14304107)
chr7 (1-66)||(4821908-4821974)
chr7 (1-66)||(13018186-13018249)
chr7 (5-62)||(11571964-11572021)
chr7 (4-66)||(13172064-13172126)
chr7 (5-66)||(23126323-23126383)
chr7 (1-66)||(48800301-48800366)
chr7 (1-33)||(4428746-4428778)
chr7 (1-60)||(29935043-29935102)
[»] chr5 (30 HSPs)
chr5 (1-66)||(23412645-23412711)
chr5 (3-66)||(12352474-12352538)
chr5 (1-66)||(89091-89157)
chr5 (1-66)||(19535939-19536005)
chr5 (1-66)||(21910960-21911026)
chr5 (1-68)||(7745299-7745367)
chr5 (1-66)||(20551295-20551361)
chr5 (4-68)||(33023084-33023149)
chr5 (1-68)||(17815400-17815468)
chr5 (1-67)||(6512102-6512169)
chr5 (1-67)||(26784773-26784840)
chr5 (1-66)||(9398399-9398465)
chr5 (1-66)||(21099346-21099411)
chr5 (1-66)||(31118292-31118358)
chr5 (4-66)||(42244133-42244195)
chr5 (1-68)||(642346-642414)
chr5 (1-68)||(4887439-4887507)
chr5 (3-66)||(5430296-5430360)
chr5 (4-69)||(22403751-22403815)
chr5 (5-66)||(14086193-14086255)
chr5 (1-66)||(41566096-41566162)
chr5 (1-66)||(25096458-25096525)
chr5 (1-66)||(25154428-25154495)
chr5 (1-68)||(6499655-6499723)
chr5 (1-68)||(21198689-21198757)
chr5 (1-67)||(28140006-28140073)
chr5 (1-66)||(21071895-21071961)
chr5 (1-67)||(23295956-23296024)
chr5 (7-66)||(34638905-34638964)
chr5 (1-62)||(33933758-33933820)
[»] chr1 (49 HSPs)
chr1 (1-66)||(23036095-23036161)
chr1 (1-66)||(26701723-26701789)
chr1 (1-68)||(22201410-22201478)
chr1 (1-66)||(12613374-12613440)
chr1 (1-66)||(30893498-30893564)
chr1 (1-66)||(32785530-32785596)
chr1 (1-65)||(29216219-29216284)
chr1 (4-67)||(1578272-1578336)
chr1 (1-68)||(10757840-10757908)
chr1 (2-64)||(16234891-16234954)
chr1 (1-66)||(25447948-25448014)
chr1 (1-66)||(35402255-35402321)
chr1 (1-66)||(38283019-38283085)
chr1 (5-66)||(48704639-48704701)
chr1 (2-68)||(7310237-7310305)
chr1 (2-66)||(22464370-22464435)
chr1 (1-68)||(12284876-12284944)
chr1 (4-66)||(22599758-22599821)
chr1 (1-71)||(33255925-33255996)
chr1 (1-71)||(33276097-33276168)
chr1 (1-66)||(1900769-1900835)
chr1 (1-66)||(2268964-2269030)
chr1 (1-66)||(2835126-2835192)
chr1 (1-66)||(17400974-17401040)
chr1 (1-66)||(36134610-36134676)
chr1 (3-66)||(20909869-20909931)
chr1 (1-66)||(39200608-39200669)
chr1 (1-66)||(18896162-18896226)
chr1 (1-67)||(25448110-25448177)
chr1 (1-66)||(22154310-22154376)
chr1 (1-66)||(22426936-22427002)
chr1 (1-59)||(17024602-17024660)
chr1 (1-66)||(20954034-20954098)
chr1 (5-51)||(28492029-28492076)
chr1 (1-66)||(21191454-21191519)
chr1 (1-67)||(676015-676083)
chr1 (5-66)||(2818940-2819001)
chr1 (1-57)||(19717941-19717998)
chr1 (3-65)||(1090123-1090184)
chr1 (1-66)||(23579947-23580014)
chr1 (1-66)||(23927472-23927539)
chr1 (1-66)||(35040571-35040637)
chr1 (1-66)||(44821120-44821186)
chr1 (3-66)||(18615353-18615415)
chr1 (3-32)||(20109579-20109608)
chr1 (1-33)||(2327019-2327051)
chr1 (3-31)||(16870391-16870419)
chr1 (4-68)||(31359699-31359763)
chr1 (1-33)||(34255121-34255153)
[»] scaffold0035 (2 HSPs)
scaffold0035 (2-66)||(19082-19147)
scaffold0035 (5-66)||(30259-30319)
[»] scaffold0004 (4 HSPs)
scaffold0004 (3-66)||(30480-30544)
scaffold0004 (4-67)||(377182-377246)
scaffold0004 (5-66)||(220675-220737)
scaffold0004 (1-66)||(243864-243929)
[»] scaffold0485 (1 HSPs)
scaffold0485 (1-66)||(8985-9051)
[»] scaffold0426 (1 HSPs)
scaffold0426 (1-66)||(14048-14114)
[»] scaffold0217 (1 HSPs)
scaffold0217 (1-66)||(19471-19537)
[»] scaffold0161 (1 HSPs)
scaffold0161 (1-66)||(9747-9813)
[»] scaffold0026 (4 HSPs)
scaffold0026 (1-66)||(115956-116022)
scaffold0026 (1-66)||(8333-8399)
scaffold0026 (1-66)||(151511-151577)
scaffold0026 (6-66)||(60452-60513)
[»] chr4 (46 HSPs)
chr4 (1-66)||(3498063-3498129)
chr4 (1-66)||(16632869-16632935)
chr4 (1-66)||(19620707-19620773)
chr4 (1-66)||(19885121-19885187)
chr4 (1-66)||(22089965-22090031)
chr4 (2-67)||(23750871-23750937)
chr4 (5-66)||(37985410-37985472)
chr4 (1-67)||(40846516-40846583)
chr4 (1-66)||(37435136-37435202)
chr4 (1-68)||(10693284-10693352)
chr4 (1-68)||(10907050-10907118)
chr4 (1-67)||(3398289-3398356)
chr4 (1-66)||(11901653-11901717)
chr4 (1-63)||(12810812-12810875)
chr4 (1-67)||(41114362-41114428)
chr4 (1-66)||(9141292-9141358)
chr4 (3-67)||(12417222-12417285)
chr4 (1-66)||(14903934-14904000)
chr4 (1-66)||(29121804-29121870)
chr4 (1-66)||(54680327-54680393)
chr4 (1-66)||(55380672-55380738)
chr4 (1-66)||(13575765-13575826)
chr4 (1-67)||(17787647-17787712)
chr4 (1-63)||(11916157-11916218)
chr4 (1-66)||(413438-413504)
chr4 (1-66)||(3793520-3793586)
chr4 (1-66)||(12601526-12601592)
chr4 (2-67)||(14153592-14153658)
chr4 (4-61)||(15139662-15139720)
chr4 (1-66)||(19911555-19911621)
chr4 (5-68)||(22675170-22675229)
chr4 (1-66)||(55732224-55732290)
chr4 (4-67)||(10250264-10250326)
chr4 (1-68)||(8106096-8106164)
chr4 (1-66)||(10660797-10660861)
chr4 (1-66)||(10874942-10875006)
chr4 (5-66)||(17540859-17540919)
chr4 (4-57)||(45833830-45833884)
chr4 (1-42)||(14604547-14604588)
chr4 (2-64)||(29680175-29680239)
chr4 (1-66)||(39419351-39419420)
chr4 (1-51)||(14833823-14833874)
chr4 (17-66)||(6642130-6642179)
chr4 (1-66)||(17247690-17247756)
chr4 (1-68)||(22191272-22191343)
chr4 (4-66)||(5874031-5874095)
[»] scaffold1782 (2 HSPs)
scaffold1782 (1-68)||(631-699)
scaffold1782 (1-67)||(778-844)
[»] scaffold0411 (1 HSPs)
scaffold0411 (5-63)||(12650-12709)
[»] scaffold0395 (1 HSPs)
scaffold0395 (4-66)||(13142-13205)
[»] scaffold0018 (2 HSPs)
scaffold0018 (4-66)||(52945-53008)
scaffold0018 (4-66)||(56897-56960)
[»] scaffold0861 (1 HSPs)
scaffold0861 (1-66)||(4555-4621)
[»] scaffold0334 (1 HSPs)
scaffold0334 (1-66)||(10230-10296)
[»] scaffold0290 (1 HSPs)
scaffold0290 (1-66)||(18229-18295)
[»] scaffold0251 (1 HSPs)
scaffold0251 (1-66)||(8126-8192)
[»] scaffold0227 (1 HSPs)
scaffold0227 (1-66)||(23097-23163)
[»] scaffold0066 (1 HSPs)
scaffold0066 (5-66)||(60493-60555)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-66)||(89680-89746)
[»] scaffold0146 (1 HSPs)
scaffold0146 (2-66)||(15523-15588)
[»] scaffold0047 (2 HSPs)
scaffold0047 (1-66)||(10311-10376)
scaffold0047 (1-51)||(30657-30708)
[»] scaffold1359 (1 HSPs)
scaffold1359 (1-66)||(297-363)
[»] scaffold0211 (1 HSPs)
scaffold0211 (1-66)||(27682-27747)
[»] scaffold0009 (2 HSPs)
scaffold0009 (1-66)||(9168-9234)
scaffold0009 (1-67)||(269164-269229)
[»] scaffold0479 (1 HSPs)
scaffold0479 (6-66)||(10379-10440)
[»] scaffold0084 (2 HSPs)
scaffold0084 (2-66)||(32856-32921)
scaffold0084 (1-66)||(49754-49820)
[»] scaffold0908 (1 HSPs)
scaffold0908 (1-68)||(3476-3544)
[»] scaffold0020 (1 HSPs)
scaffold0020 (1-66)||(145306-145370)
[»] scaffold0269 (1 HSPs)
scaffold0269 (1-66)||(7746-7812)
[»] scaffold0028 (1 HSPs)
scaffold0028 (1-66)||(5218-5284)
[»] scaffold0022 (3 HSPs)
scaffold0022 (1-66)||(39848-39913)
scaffold0022 (1-66)||(137908-137973)
scaffold0022 (1-68)||(159509-159576)
[»] scaffold0007 (1 HSPs)
scaffold0007 (1-66)||(143527-143593)
[»] scaffold0622 (1 HSPs)
scaffold0622 (3-66)||(3091-3153)
[»] scaffold0210 (1 HSPs)
scaffold0210 (1-57)||(2067-2124)
[»] scaffold0916 (1 HSPs)
scaffold0916 (4-66)||(2248-2309)
[»] scaffold0771 (1 HSPs)
scaffold0771 (5-60)||(1266-1324)
[»] scaffold0040 (1 HSPs)
scaffold0040 (1-66)||(1110-1173)
[»] scaffold0081 (1 HSPs)
scaffold0081 (4-66)||(41090-41152)
[»] scaffold0078 (1 HSPs)
scaffold0078 (2-67)||(31376-31440)
[»] scaffold1709 (1 HSPs)
scaffold1709 (1-58)||(36-94)
[»] scaffold1331 (1 HSPs)
scaffold1331 (1-58)||(227-285)
[»] scaffold0439 (1 HSPs)
scaffold0439 (1-66)||(6316-6382)
[»] scaffold0243 (1 HSPs)
scaffold0243 (5-66)||(4620-4682)
[»] scaffold0059 (1 HSPs)
scaffold0059 (17-66)||(13866-13916)
[»] scaffold0005 (2 HSPs)
scaffold0005 (1-42)||(212790-212831)
scaffold0005 (1-51)||(5825-5876)
[»] scaffold0795 (1 HSPs)
scaffold0795 (1-66)||(199-266)
[»] scaffold0388 (1 HSPs)
scaffold0388 (1-66)||(4855-4919)
[»] scaffold0193 (1 HSPs)
scaffold0193 (17-67)||(16235-16286)
[»] scaffold0023 (1 HSPs)
scaffold0023 (4-66)||(103996-104059)
[»] scaffold0056 (3 HSPs)
scaffold0056 (1-68)||(25259-25330)
scaffold0056 (14-66)||(35786-35838)
scaffold0056 (1-33)||(34452-34484)
[»] scaffold0261 (1 HSPs)
scaffold0261 (5-42)||(5587-5624)
[»] scaffold0488 (1 HSPs)
scaffold0488 (5-68)||(11210-11274)
[»] scaffold0207 (2 HSPs)
scaffold0207 (1-33)||(11176-11208)
scaffold0207 (1-33)||(21076-21108)
[»] scaffold0062 (1 HSPs)
scaffold0062 (42-74)||(27768-27800)
[»] scaffold0002 (1 HSPs)
scaffold0002 (2-30)||(116224-116252)


Alignment Details
Target: chr6 (Bit Score: 57; Significance: 6e-24; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 19086587 - 19086655
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaacata 68  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  19086587 caatttttaataccttgttatcatcaaaactctcaaagggtaatgttaaacacattttgttccaacata 19086655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 14100185 - 14100113
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaacatactat 72  Q
    ||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  14100185 caatttttaatacattgttatcatcaaaactctcaaagggtaatgttaaacacattttgttccaacattctat 14100113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 9718280 - 9718346
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  9718280 caatttttaataccttgttatcatcaaaactctcaaagggtaatgttaaacacattttattccaaca 9718346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 19689153 - 19689219
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  19689153 caatttttaataccttgttatcatcaaaactctaaaagggtaatgttaaacacattttgttccaaca 19689219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 34451396 - 34451330
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  34451396 caatttttaataccttgttatcatcaaaactcttaaagggtaatgttaaacacattttgttccaaca 34451330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 32544697 - 32544765
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaacata 68  Q
    ||||||||||||  |||||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  32544697 caatttttaatactttgttaacatcaaaactctcaaagggtaatgttaaacacattttgttccaacata 32544765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 12715147 - 12715081
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggtatgttaaacacattttgttccaacat 67  Q
    |||||||||||||||||||||||||||||||||||| |   |||||||||||||||| |||||||||    
T  12715147 caatttttaatatcttgttatcatcaaaactctcaaggataatgttaaacacattttattccaacat 12715081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 13602595 - 13602657
Alignment:
Q  5 ttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  13602595 ttttaataccttgttatcatcaaaactctcaaagggtaatgttaaaaacattttgttccaaca 13602657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 16528960 - 16529026
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| ||| ||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  16528960 caatttttaataccttattatcatcaaaactcgcaaagggtaatgttaaacacattttgttccaaca 16529026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 18378691 - 18378757
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    ||||||||||||||||||||||||||||||||| ||||| | |||||||||||||||| ||||||||    
T  18378691 caatttttaatatcttgttatcatcaaaactctaaaaggttaatgttaaacacatttttttccaaca 18378757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 19624399 - 19624465
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    ||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  19624399 caatttttaatactttgttatcatcaaaactctcaaagggtaatgttaaacacattttgctccaaca 19624465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 29918440 - 29918506
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||  || ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  29918440 caatttttaatgcctagttatcatcaaaactctcaaagggtgatgttaaacacattttgttccaaca 29918506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 15987631 - 15987688
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacatttt 57  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  15987631 caatttttaataccttgttatcatcaaaactctcaaagggtaatgttaaacacatttt 15987688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 19626262 - 19626328
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaacata 68  Q
    |||||||||||| ||||||||||||||||  |||||||||| |||||||||||||||||||||||||||    
T  19626262 caatttttaataccttgttatcatcaaaa--ctcaaagggtaatgttaaacacattttgttccaacata 19626328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 22802561 - 22802623
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggtatgttaaacacattttgttccaacat 67  Q
    |||||||||||| |||||||||||||||||||||||||||||    |||||||||||||||||||||    
T  22802561 caatttttaataccttgttatcatcaaaactctcaaagggta----aaacacattttgttccaacat 22802623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 13435970 - 13436037
Alignment:
Q  2 aatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaacata 68  Q
    |||| |||||| |||||||||||||||||||||||||| | |||||| ||||||||||||||||||||    
T  13435970 aattattaataccttgttatcatcaaaactctcaaaggataatgttagacacattttgttccaacata 13436037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 17381867 - 17381934
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaacat 67  Q
    |||||||||||| |||||||||||||||||||| || || | ||||||||||||||||||||||||||    
T  17381867 caatttttaataccttgttatcatcaaaactcttaagggttaatgttaaacacattttgttccaacat 17381934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 21625540 - 21625602
Alignment:
Q  4 tttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  21625540 tttttaataccttgttatcatcaaaactctcaaagggtaatgttaaacacatttt-ttccaaca 21625602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 7618123 - 7618057
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||| || || | |||||||||||||||||||||||||    
T  7618123 caatttttaataccttgttatcatcaaaactcttaagggttaatgttaaacacattttgttccaaca 7618057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 15955124 - 15955190
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||| || || | |||||||||||||||||||||||||    
T  15955124 caatttttaataccttgttatcatcaaaactcttaagggttaatgttaaacacattttgttccaaca 15955190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 24117265 - 24117331
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    ||||||||||||  ||||||||||||||||| ||||| ||| |||||||||||||||||||||||||    
T  24117265 caatttttaatacattgttatcatcaaaactttcaaaaggtaatgttaaacacattttgttccaaca 24117331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 24508067 - 24508005
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttcc 62  Q
    |||||||||||||||| |||||||||||||||||||| | | |||||||||||||||||||||    
T  24508067 caatttttaatatcttattatcatcaaaactctcaaaagttaatgttaaacacattttgttcc 24508005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 26971922 - 26971856
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    ||||||||||||  ||||||||||||||||||| ||||| | |||||||||||||||||||||||||    
T  26971922 caatttttaatactttgttatcatcaaaactcttaaaggctaatgttaaacacattttgttccaaca 26971856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 67 - 119
Target Start/End: Complemental strand, 7644901 - 7644848
Alignment:
Q  67 tactatatagatcatcaagaatgagttgtg-aatcacataagagattaatattt 119  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  7644901 tactatatagatgatcaagaatgagttgtgaaatcacataagagattaatattt 7644848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 19473243 - 19473307
Alignment:
Q  2 aatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    ||||||||||| |||||||||||||||||||| ||||| | |||||||||||||||||||||||||    
T  19473243 aatttttaataccttgttatcatcaaaactct-aaaggataatgttaaacacattttgttccaaca 19473307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 20112426 - 20112369
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacatttt 57  Q
    |||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||    
T  20112426 caatttttaataccttgttatcatcaaaactcttaaagggtaatgttaaacacatttt 20112369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 16264879 - 16264819
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggtatgttaaacacattttgttccaac 65  Q
    ||||||||||||  ||||||||||||||||||||||||||||    |||||||||||||||||||    
T  16264879 caatttttaatacgttgttatcatcaaaactctcaaagggta----aaacacattttgttccaac 16264819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 18384075 - 18384141
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||||||||| | |||||||| ||||| || |||||||    
T  18384075 caatttttaataccttgttatcatcaaaactctcaaaggttaatgttaaaaacattgtgctccaaca 18384141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 12348564 - 12348626
Alignment:
Q  4 tttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaacat 67  Q
    ||||||||| |||||||||||||||||||  ||||| || |||||||||||||||||||||||||    
T  12348564 tttttaataccttgttatcatcaaaactc--aaaggataatgttaaacacattttgttccaacat 12348626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 15302612 - 15302672
Alignment:
Q  4 tttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaa 64  Q
    |||||||||  ||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  15302612 tttttaatacattgttatcatcaaaactctcaaagggtaatgtt-aacacattttgttccaa 15302672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 21235533 - 21235591
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggtatgttaaacacattttgttcca 63  Q
    |||||||||||| |||||||||||||||||||| ||||||||    |||||||||||||||||    
T  21235533 caatttttaataccttgttatcatcaaaactcttaaagggta----aaacacattttgttcca 21235591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 3680912 - 3680976
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaa 64  Q
    ||||||||||||||||||||||||||||||||  ||| ||| |||||||||| ||||| ||||||    
T  3680912 caatttttaatatcttgttatcatcaaaactccaaaaaggtaatgttaaacatattttattccaa 3680976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 20487614 - 20487550
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaa-agggtatgttaaacacattttgttccaa 64  Q
    ||||||||||||| ||||||||||||||||||| || ||   |||||||||||||||||||||||    
T  20487614 caatttttaatattttgttatcatcaaaactcttaagagttaatgttaaacacattttgttccaa 20487550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 20730433 - 20730372
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggtatgttaaacacattttgttccaaca 66  Q
    ||||||||||||  ||||| ||||||||||||||||||||||    ||||||||||||||||||||    
T  20730433 caatttttaatacgttgttttcatcaaaactctcaaagggta----aaacacattttgttccaaca 20730372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 66
Target Start/End: Original strand, 26944002 - 26944053
Alignment:
Q  15 ttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  26944002 ttgttatcatcaaaactct-aaagggtaatgttaaacacattttgttccaaca 26944053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 17928240 - 17928304
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaaca 66  Q
    ||||||||| || ||||||||||| |||||||  |||||||| ||||||||||||||||||||||||    
T  17928240 caatttttattaccttgttatcataaaaactc--aaagggtaatgttaaacacattttgttccaaca 17928304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 12423661 - 12423727
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggtatgt-taaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||| ||  | ||| | |||||||||||||||||||||    
T  12423661 caatttttaataccttgttatcatcaaaactcttaagagttatttctaaacacattttgttccaaca 12423727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 204
Target Start/End: Complemental strand, 7644809 - 7644768
Alignment:
Q  163 gattgaaaatgagaaaaacaatcaatatttctaaaaaccgac 204  Q
    |||||||||||||||||||| | |||||||||||||||||||    
T  7644809 gattgaaaatgagaaaaacatttaatatttctaaaaaccgac 7644768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 18436011 - 18436076
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggtatgttaaacacattttgttccaaca 66  Q
    ||||||||||||  ||||||||||||||||||||| ||||||   ||||||  |||||||||||||    
T  18436011 caatttttaatacgttgttatcatcaaaactctcagagggtaatgtaaacatgttttgttccaaca 18436076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 23284999 - 23285063
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaa 64  Q
    |||||||||||||||  ||||||||||||||||||||  || || || |||||||||||||||||    
T  23284999 caatttttaatatctaattatcatcaaaactctcaaaatgtaatattcaacacattttgttccaa 23285063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 7812442 - 7812504
Alignment:
Q  4 tttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaaca 66  Q
    |||||||||  |||||||||| |||||||  |||||||| ||||||||||||||||||||||||    
T  7812442 tttttaatactttgttatcattaaaactca-aaagggtaatgttaaacacattttgttccaaca 7812504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 16877655 - 16877718
Alignment:
Q  4 tttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaaca 66  Q
    |||||||||  ||||||||||||||| ||| || || || ||||||||||||||||||||||||    
T  16877655 tttttaatactttgttatcatcaaaattcttaagggttaatgttaaacacattttgttccaaca 16877718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 19288985 - 19288954
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactc 32  Q
    ||||||||||||||||||||||||||||||||    
T  19288985 caatttttaatatcttgttatcatcaaaactc 19288954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 5497464 - 5497434
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaact 31  Q
    |||||||||||||||||||||||||||||||    
T  5497464 caatttttaatatcttgttatcatcaaaact 5497434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 21618674 - 21618740
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    ||||||||||||  ||||||||||||||||||| || || | | |||||||||||||| ||||||||    
T  21618674 caatttttaataatttgttatcatcaaaactcttaagggttaacgttaaacacattttattccaaca 21618740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 23298387 - 23298438
Alignment:
Q  5 ttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacatttt 57  Q
    |||||||| ||||||||||||||||  |||||||||| ||||||||||||||||    
T  23298387 ttttaataccttgttatcatcaaaa--ctcaaagggtaatgttaaacacatttt 23298438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 25930882 - 25930942
Alignment:
Q  4 tttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaaca 66  Q
    ||||||||| |||||||||| ||||||||  |||||||| ||||||||||||||| ||||||||    
T  25930882 tttttaataccttgttatcaccaaaactc--aaagggtaatgttaaacacatttt-ttccaaca 25930942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 6e-24; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 38631385 - 38631453
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaacata 68  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  38631385 caatttttaataccttgttatcatcaaaactctcaaagggtaatgttaaacacattttgttccaacata 38631453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 18376613 - 18376547
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  18376613 caatttttaataccttgttatcatcaaaactctcaaagggtaatgttaaacacattttgttccaaca 18376547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 22454659 - 22454593
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  22454659 caatttttaataccttgttatcatcaaaactctcaaagggtaatgttaaacacattttgttccaaca 22454593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 40782902 - 40782968
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  40782902 caatttttaataccttgttatcatcaaaactctcaaagggtaatgttaaacacattttgttccaaca 40782968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 10009436 - 10009370
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaacat 67  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  10009436 caatttttaata-cttgttatcatcaaaactctcaaagggtaatgttaaacacattttgttccaacat 10009370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 21536918 - 21536852
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  21536918 caatttttaataccttgttatcatcaaaactctcaaagggtaatgttaaacacatgttgttccaaca 21536852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 22318043 - 22318109
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  22318043 caatttttaataccttgttatcatcaaaactctcaaagggtaattttaaacacattttgttccaaca 22318109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 23184050 - 23183984
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  23184050 caatttttaataccttgttatcatcaaaactctcaaaggataatgttaaacacattttgttccaaca 23183984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 23595307 - 23595241
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  23595307 caatttttaataccttgttatcatcaaaactctcaaaggataatgttaaacacattttgttccaaca 23595241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 28140303 - 28140237
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  28140303 caatttttaataccttgttatcatcaaaactctcaaagggtaatgttaaacatattttgttccaaca 28140237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 17966818 - 17966750
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaacata 68  Q
    ||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  17966818 caatttttaatactttgttatcatcaaaactctcaaagggtaatgttaaacacattttattccaacata 17966750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 25189787 - 25189850
Alignment:
Q  4 tttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaaca 66  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  25189787 tttttaataccttgttatcatcaaaactctcaaagggtattgttaaacacattttattccaaca 25189850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 9015037 - 9014971
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||| ||||||| | |||||||||||||||||||||||    
T  9015037 caatttttaataccttgttatcatcaaaactcttaaagggtaaagttaaacacattttgttccaaca 9014971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 19540829 - 19540895
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| ||||||||| |||||||||||||||| | |||||||||||||||||||||||||    
T  19540829 caatttttaataccttgttatcctcaaaactctcaaaggataatgttaaacacattttgttccaaca 19540895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 25829535 - 25829601
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||  ||||||||| |||||||||||||||||||||||||    
T  25829535 caatttttaataccttgttatcatcaaaaccttcaaagggtaatgttaaacacattttgttccaaca 25829601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 26618769 - 26618704
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaacat 67  Q
    ||||||||||||||||||||| |||||||  |||||||||| ||||||||||||||||||||||||||    
T  26618769 caatttttaatatcttgttattatcaaaa--ctcaaagggtaatgttaaacacattttgttccaacat 26618704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 20151716 - 20151654
Alignment:
Q  4 tttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaaca 66  Q
    ||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  20151716 tttttaataccttgttatcatcaaaac-ctcaaagggtaatgttaaacacattttgttccaaca 20151654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 22260839 - 22260902
Alignment:
Q  4 tttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    ||||||||| |||||||||| || |||||||||||||| |||||||||||||||||||||||||    
T  22260839 tttttaataccttgttatcaccacaactctcaaagggtaatgttaaacacattttgttccaaca 22260902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 24850331 - 24850269
Alignment:
Q  5 ttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||| ||||    
T  24850331 ttttaataccttgttataatcaaaactctcaaagggtaatgttaaacacattttgttctaaca 24850269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 28711382 - 28711316
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||| || || | |||||||||||||||||||||||||    
T  28711382 caatttttaataccttgttatcatcaaaactcttaagggttaatgttaaacacattttgttccaaca 28711316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 38781811 - 38781877
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||| | ||||| | |||||||||||||||||||||||||    
T  38781811 caatttttaataccttgttatcatcaaaacttttaaaggataatgttaaacacattttgttccaaca 38781877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 41121417 - 41121352
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||| ||||||||    
T  41121417 caatttttaataccttgttatcatcaaaactct-aaagggtaatgttaaacacattttattccaaca 41121352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 22187788 - 22187728
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggtatgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||||||||||     |||||||||||||||||||||    
T  22187788 caatttttaataccttgttatcatcaaaactctcaaaggg-----taaacacattttgttccaaca 22187728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 19115562 - 19115627
Alignment:
Q  2 aatttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaacata 68  Q
    |||||||||||  ||||||||||||||||||  |||||||| ||||||||||||||||||||||||||    
T  19115562 aatttttaatactttgttatcatcaaaactc--aaagggtaatgttaaacacattttgttccaacata 19115627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 24302612 - 24302551
Alignment:
Q  4 tttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaaca 66  Q
    ||||||||| ||||||||||||||||  ||||||||||| ||||||||||||||||||||||||    
T  24302612 tttttaataccttgttatcatcaaaa--ctcaaagggtattgttaaacacattttgttccaaca 24302551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 31800551 - 31800483
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaacata 68  Q
    |||||||||||| ||| |||||||||||||||| || || || ||||||||||||||||||||||||||    
T  31800551 caatttttaataccttattatcatcaaaactcttaagggttaatgttaaacacattttgttccaacata 31800483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 18703209 - 18703273
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| ||||||||||||||||  |||||||||| ||||||||||||||||||| |||||    
T  18703209 caatttttaataccttgttatcatcaaaa--ctcaaagggtaatgttaaacacattttgtttcaaca 18703273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 24576480 - 24576546
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaacat 67  Q
    |||||||||||  |||||||||||||||||||||||| ||| |||||||||| |||||||||||||||    
T  24576480 caatttttaatc-cttgttatcatcaaaactctcaaaaggtaatgttaaacatattttgttccaacat 24576546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 28700881 - 28700814
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaacat 67  Q
    |||||||||||| |||||||||||||||||||| || || | |||||||||||||||| |||||||||    
T  28700881 caatttttaataccttgttatcatcaaaactcttaagggttaatgttaaacacattttattccaacat 28700814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 13963679 - 13963613
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| ||| |||||||||||||||||||||||| || ||||| ||||||| ||||||||    
T  13963679 caatttttaataccttattatcatcaaaactctcaaagggtaatattaaagacattttattccaaca 13963613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 20568417 - 20568351
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    ||||||||||||  ||||| |||||||||||||||| |||| ||||||| |||||||||||||||||    
T  20568417 caatttttaatactttgttgtcatcaaaactctcaatgggtaatgttaagcacattttgttccaaca 20568351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 22272565 - 22272630
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    ||||||||||||  ||||||||||||||||||| ||||||| |||||||| ||||||||||||||||    
T  22272565 caatttttaatacattgttatcatcaaaactct-aaagggtaatgttaaatacattttgttccaaca 22272630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 24377500 - 24377566
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaaca 66  Q
    |||||||||||| ||||| |||||||||||  ||||||| || ||||||||||||||||||||||||    
T  24377500 caatttttaataccttgtcatcatcaaaacattcaaaggataatgttaaacacattttgttccaaca 24377566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 34321571 - 34321505
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaaca 66  Q
    ||||||||||||  ||||||||||||||||||| || || || ||||||||||||||||||||||||    
T  34321571 caatttttaatactttgttatcatcaaaactcttaagggttattgttaaacacattttgttccaaca 34321505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 30667420 - 30667485
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaac 65  Q
    |||||||||||| ||||| |||||||||||||| ||||||| |||||||  |||||||||||||||    
T  30667420 caatttttaataccttgtaatcatcaaaactctaaaagggtaatgttaagaacattttgttccaac 30667485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 31327625 - 31327558
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaacat 67  Q
    ||||||||||||  ||||||||||||||||||| || |  | ||||||||||||||||||||||||||    
T  31327625 caatttttaatactttgttatcatcaaaactcttaaggtttgatgttaaacacattttgttccaacat 31327558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 31334346 - 31334279
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaacat 67  Q
    ||||||||||||  ||||||||||||||||||| || |  | ||||||||||||||||||||||||||    
T  31334346 caatttttaatactttgttatcatcaaaactcttaaggtttgatgttaaacacattttgttccaacat 31334279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 33074674 - 33074740
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaaca 66  Q
    ||||||||||||| ||||||| ||||||||||| || || || || |||||||||||||||||||||    
T  33074674 caatttttaatattttgttattatcaaaactcttaagggttattgctaaacacattttgttccaaca 33074740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 65
Target Start/End: Original strand, 30621619 - 30621684
Alignment:
Q  2 aatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacaca-ttttgttccaac 65  Q
    ||||||||| | |||||||||||||||||||||||||||| |||||||  ||| ||||||||||||    
T  30621619 aatttttaaaaccttgttatcatcaaaactctcaaagggtaatgttaagaacatttttgttccaac 30621684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 65
Target Start/End: Original strand, 30624240 - 30624305
Alignment:
Q  2 aatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacaca-ttttgttccaac 65  Q
    ||||||||| | |||||||||||||||||||||||||||| |||||||  ||| ||||||||||||    
T  30624240 aatttttaaaaccttgttatcatcaaaactctcaaagggtaatgttaagaacatttttgttccaac 30624305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 1586708 - 1586639
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggta----tgttaaacacattttgttccaaca 66  Q
    ||||||||||||  ||||||||||||||||||| ||||| ||    || |||||||||||||||||||||    
T  1586708 caatttttaatactttgttatcatcaaaactcttaaaggttattattgctaaacacattttgttccaaca 1586639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 24964123 - 24964187
Alignment:
Q  4 tttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaacat 67  Q
    ||||||||| ||| |||||||||||||  ||||||| || ||||||||||||||||||| |||||    
T  24964123 tttttaataccttattatcatcaaaaccttcaaaggataatgttaaacacattttgttcaaacat 24964187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 22802905 - 22802972
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaacat 67  Q
    ||||||||||||  | ||||||||||||||||| || || || |||||||||||||||| ||||||||    
T  22802905 caatttttaatacttcgttatcatcaaaactcttaacggttaatgttaaacacattttgatccaacat 22802972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 35743756 - 35743690
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    ||||||||||||  ||||||||||||||||||| ||||| | | ||||||| |||||||||| ||||    
T  35743756 caatttttaatactttgttatcatcaaaactcttaaaggttaacgttaaacgcattttgttctaaca 35743690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 45086804 - 45086738
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| ||| ||||||||||||||||  |||| | |||||| ||||||||| ||||||||    
T  45086804 caatttttaataccttattatcatcaaaactctttaaggttaatgttagacacattttattccaaca 45086738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 18430600 - 18430536
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggtatgttaaacacattttgttccaaca 66  Q
    |||||||||||| ||| |||||||||||||||  ||||   |||||||||||||||| ||||||||    
T  18430600 caatttttaataccttattatcatcaaaactc-aaaagttaatgttaaacacattttattccaaca 18430536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 39037327 - 39037286
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggta 42  Q
    ||||||||||||  ||||||||||||||||||| ||||||||    
T  39037327 caatttttaataaattgttatcatcaaaactctaaaagggta 39037286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 44881587 - 44881639
Alignment:
Q  2 aatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacat 54  Q
    |||||||||||  ||||||||||||||||||| ||||||| |||||||||||||    
T  44881587 aatttttaatacattgttatcatcaaaactct-aaagggtaatgttaaacacat 44881639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 66
Target Start/End: Complemental strand, 6573793 - 6573741
Alignment:
Q  15 ttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaaca 66  Q
    ||||||||||||||||  | |||||||| ||||| ||||||||||||||||||    
T  6573793 ttgttatcatcaaaacctttaaagggtaatgttatacacattttgttccaaca 6573741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 14581886 - 14581918
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactct 33  Q
    ||||||||||||| |||||||||||||||||||    
T  14581886 caatttttaatattttgttatcatcaaaactct 14581918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 5365 - 5298
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaacat 67  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  5365 caatttttaataccttgttatcatcaaaactctcaaagggtaatgttaaacacattttgttccaacat 5298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 2e-23; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 38177412 - 38177345
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaacat 67  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  38177412 caatttttaataccttgttatcatcaaaactctcaaagggtaatgttaaacacattttgttccaacat 38177345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 14392729 - 14392659
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaacatact 70  Q
    |||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  14392729 caatttttaataccttgttatcatcaaaaatctcaaagggtaatgttaaacacattttgttccaacatact 14392659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 16658365 - 16658300
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggtatgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  16658365 caatttttaataccttgttatcatcaaaactcttaaagggtatgttaaacatattttgttccaaca 16658300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 3522700 - 3522766
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  3522700 caatttttaataacttgttatcatcaaaactctcaaagggtaatgttaaacatattttgttccaaca 3522766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 20646590 - 20646656
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  20646590 caatttttaataccttgttatcatgaaaactctcaaagggtaatgttaaacacattttgttccaaca 20646656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 22803820 - 22803758
Alignment:
Q  5 ttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  22803820 ttttaatatcttgttatcatcaaaactctcatagggtaatgttaaacacattttgttccaaca 22803758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 28582543 - 28582609
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaaca 66  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  28582543 caatttttaataccttgttatcatcaaaactctcaaagggtagtgttaaacacactttgttccaaca 28582609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 52920841 - 52920907
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  52920841 caatttttaataccttgttatcatcaaaactctcaaaggataatgttaaacacattttgttccaaca 52920907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 47405175 - 47405107
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaacata 68  Q
    |||||||||||||||||||||||||||||||||||| || | |||||| ||||||||||||||||||||    
T  47405175 caatttttaatatcttgttatcatcaaaactctcaagggttaatgttacacacattttgttccaacata 47405107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 12968782 - 12968846
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||||    
T  12968782 caatttttaatatcttgttatcatcaaaa--ctcaaagggtaatgttaaacacattttgttccaaca 12968846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 18142576 - 18142510
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaag-ggtatgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||| |||||| || |||||||||||||||||||||||||    
T  18142576 caatttttaataccttgttatcatcaaaactttcaaagaggaatgttaaacacattttgttccaaca 18142510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 46349551 - 46349485
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| ||||||||||||||||||||||| || | |||||||||||||||||||||||||    
T  46349551 caatttttaataccttgttatcatcaaaactctcaagggttaatgttaaacacattttgttccaaca 46349485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 17238676 - 17238611
Alignment:
Q  2 aatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    ||||||||||| ||| |||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  17238676 aatttttaataccttattatcatcaaaactcttaaagggtaatgttaaacacattttgttccaaca 17238611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 20725535 - 20725599
Alignment:
Q  2 aatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    ||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  20725535 aatttttaataccttgttatcatcaaaactct-aaagggtaatgttaaacacattttgttccaaca 20725599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 11869521 - 11869585
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaa 64  Q
    |||||||||||| ||||||||||||||||||||||| || | |||||||||||||||||||||||    
T  11869521 caatttttaataccttgttatcatcaaaactctcaagggttaatgttaaacacattttgttccaa 11869585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 53056451 - 53056387
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaa 64  Q
    ||||||||||||||||||||||||||||||||| || || | |||||||||||||||||||||||    
T  53056451 caatttttaatatcttgttatcatcaaaactcttaagggttaatgttaaacacattttgttccaa 53056387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 16199529 - 16199459
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaacatacta 71  Q
    |||||||||||| |||||||||||||||||||| | ||||| |||||||||||| |||||||||||||||||    
T  16199529 caatttttaataccttgttatcatcaaaactct-atagggtaatgttaaacacactttgttccaacatacta 16199459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 49553211 - 49553144
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaacat 67  Q
    |||||||||||| | |||||||||||||||||| ||||| | ||||||||||||||||||||||||||    
T  49553211 caatttttaataccctgttatcatcaaaactcttaaaggataatgttaaacacattttgttccaacat 49553144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 15903636 - 15903702
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||| || |||| |||||||||||||||| ||||||||    
T  15903636 caatttttaataccttgttatcatcaaaactcttaaggggtaatgttaaacacatttttttccaaca 15903702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 16032916 - 16032981
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||| ||||||| |||| ||||||||||||||||||||    
T  16032916 caatttttaataccttgttatcatcaaaactct-aaagggtaatgtaaaacacattttgttccaaca 16032981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 12397552 - 12397616
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggtatgttaaacacattttgttccaaca 66  Q
    ||||||||||||||||||||||||||||||| | |||||  |||||||| ||||||||||||||||    
T  12397552 caatttttaatatcttgttatcatcaaaact-taaaaggtaatgttaaagacattttgttccaaca 12397616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 13824472 - 13824536
Alignment:
Q  5 ttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaacata 68  Q
    |||||||| |||||||||||||||||||| ||||||| |||||||||| ||||| ||||||||||    
T  13824472 ttttaataccttgttatcatcaaaactcttaaagggtaatgttaaacatattttattccaacata 13824536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 20627203 - 20627146
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggtatgttaaacacattttgttcc 62  Q
    |||||||||||| |||||||||||||||||||||||||||||    ||||||||||||||||    
T  20627203 caatttttaataccttgttatcatcaaaactctcaaagggta----aaacacattttgttcc 20627146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 40800261 - 40800322
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggtatgttaaacacattttgttccaaca 66  Q
    |||| ||||||| |||||||||||||||||||||||||||||    ||||||||||||||||||||    
T  40800261 caatctttaataccttgttatcatcaaaactctcaaagggta----aaacacattttgttccaaca 40800322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 2561620 - 2561683
Alignment:
Q  4 tttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    ||||||||| ||||||||||||||||||||||||| || |||||||||||||||| || |||||    
T  2561620 tttttaataccttgttatcatcaaaactctcaaagagtaatgttaaacacattttatttcaaca 2561683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 14969754 - 14969817
Alignment:
Q  4 tttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaaca 66  Q
    ||||||||| |||| ||| || ||||||||||||||||| ||||||||||||||||||||||||    
T  14969754 tttttaataccttgatattattaaaactctcaaagggtaatgttaaacacattttgttccaaca 14969817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 17698002 - 17698066
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| ||||||||||||||||  |||||||||| |||||||||||||||| ||||||||    
T  17698002 caatttttaataccttgttatcatcaaaa--ctcaaagggtaatgttaaacacatttttttccaaca 17698066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 66
Target Start/End: Original strand, 21233264 - 21233315
Alignment:
Q  16 tgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaaca 66  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  21233264 tgttatcatcaaaactcttaaagggtaatgttaaacacattttgttccaaca 21233315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 31303825 - 31303892
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaacat 67  Q
    ||||||||||||  |||| |||||||||||||||||||| | |||||||||||||||| |||||||||    
T  31303825 caatttttaatacattgtaatcatcaaaactctcaaaggataatgttaaacacattttattccaacat 31303892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 49642502 - 49642435
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaaca-cattttgttccaaca 66  Q
    ||||||||||||  ||||||||||||||||||||||||||| ||||||||||  ||||||||||||||    
T  49642502 caatttttaatactttgttatcatcaaaactctcaaagggtaatgttaaacataattttgttccaaca 49642435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 6091168 - 6091234
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaaca 66  Q
    |||||||||||| ||| |||| ||||||| ||||||||| || ||||||||||||||||||||||||    
T  6091168 caatttttaatagcttattatgatcaaaattctcaaaggataatgttaaacacattttgttccaaca 6091234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 11907963 - 11907897
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaaca 66  Q
    ||||||||||||  |||||||||||||||||||||| |  || ||||||||||||||||||||||||    
T  11907963 caatttttaatactttgttatcatcaaaactctcaaggtttattgttaaacacattttgttccaaca 11907897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 12962824 - 12962758
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| ||| |||||||||||||||||||||| | |||||||||||| ||||||| ||||    
T  12962824 caatttttaataccttattatcatcaaaactctcaaaggttaatgttaaacacaatttgttcaaaca 12962758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 19249130 - 19249065
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaaca 66  Q
    ||||||||||||  ||||||||||||||||||| |||||||| | ||||||||||||||||||||||    
T  19249130 caatttttaatactttgttatcatcaaaactct-aaagggtaatattaaacacattttgttccaaca 19249065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 24775222 - 24775156
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaaca 66  Q
    ||||||||||||  ||||||||||||||||||| || || || ||||||||||||||||||||||||    
T  24775222 caatttttaatactttgttatcatcaaaactcttaagggttaatgttaaacacattttgttccaaca 24775156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 25397985 - 25397919
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| ||| |||||||||||||||| ||| ||| || ||||||||||||||||||||||    
T  25397985 caatttttaataccttattatcatcaaaactcttaaaaggtaattttaaacacattttgttccaaca 25397919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 41495413 - 41495475
Alignment:
Q  5 ttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||| |||||||||||||||||||||||||  | |||||||||||||||| ||||||||    
T  41495413 ttttaataccttgttatcatcaaaactctcaaagaataatgttaaacacattttattccaaca 41495475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 4242918 - 4242855
Alignment:
Q  3 atttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaaca 66  Q
    ||||||||||||||||||||||||||||||  ||| |||| ||||||||||||| ||||||||||    
T  4242918 atttttaatatcttgttatcatcaaaactc-aaaatggtattgttaaacacattatgttccaaca 4242855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 13949126 - 13949184
Alignment:
Q  5 ttttaatatcttgttatcatcaaaactctcaaaggg---tatgttaaacacattttgtt 60  Q
    |||||||| |||||||||||||||||||||||||||   ||||||||||| ||||||||    
T  13949126 ttttaataccttgttatcatcaaaactctcaaagggtaatatgttaaacatattttgtt 13949184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 18118387 - 18118323
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaa 64  Q
    ||||||||||||  ||||||||||||||||| ||||||||| ||||||||| | |||||||||||    
T  18118387 caatttttaatactttgttatcatcaaaactttcaaagggtaatgttaaacgcgttttgttccaa 18118323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 33583700 - 33583764
Alignment:
Q  3 atttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaaca 66  Q
    ||||| |||| |||||||||||||||||||| || || || ||||||||||||||||||||||||    
T  33583700 attttgaataccttgttatcatcaaaactcttaagggttaatgttaaacacattttgttccaaca 33583764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 33598320 - 33598384
Alignment:
Q  3 atttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaaca 66  Q
    ||||| |||| |||||||||||||||||||| || || || ||||||||||||||||||||||||    
T  33598320 attttgaataccttgttatcatcaaaactcttaagggttaatgttaaacacattttgttccaaca 33598384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 22141183 - 22141246
Alignment:
Q  4 tttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaaca 66  Q
    |||||||||  ||||||||||||||||||| || || || ||||||||||||||||||||||||    
T  22141183 tttttaatactttgttatcatcaaaactcttaagggttaatgttaaacacattttgttccaaca 22141246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 512755 - 512821
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||| ||| || |  || ||||||||||||||||||||||||    
T  512755 caatttttaatagcttgttatcatcaaaaatcttaaggtttattgttaaacacattttgttccaaca 512821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 12723960 - 12723910
Alignment:
Q  17 gttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    ||||||||||||||||| ||||||| |||||||||| ||||||||||||||    
T  12723960 gttatcatcaaaactcttaaagggtaatgttaaacagattttgttccaaca 12723910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 15833829 - 15833895
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaaca 66  Q
    ||||||||||||  ||||||||||||||||||| || |  || ||||||||||||||||||||||||    
T  15833829 caatttttaatactttgttatcatcaaaactctaaaggtttattgttaaacacattttgttccaaca 15833895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 15851375 - 15851441
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaaca 66  Q
    ||||||||||||  ||||||||||||||||||| || |  || ||||||||||||||||||||||||    
T  15851375 caatttttaatactttgttatcatcaaaactctaaaggtttattgttaaacacattttgttccaaca 15851441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 29855862 - 29855928
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||| || |  | |||||||||||||| ||||||||||    
T  29855862 caatttttaataccttgttatcatcaaaactcttaaggattaatgttaaacacattatgttccaaca 29855928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 47208145 - 47208183
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagg 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  47208145 caatttttaatatcttgttatcattaaaactctcaaagg 47208183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 12388593 - 12388528
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggtatgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||| |||||||||| || |  ||  |||||||||||||||||||||||||    
T  12388593 caatttttaataccttgttttcatcaaaaccctaatcggtaatgttaaacacattttgttccaaca 12388528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 19197581 - 19197519
Alignment:
Q  3 atttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||| ||||||||||||||||  || ||||||| ||||||||| |||||||||||||||    
T  19197581 atttttaataccttgttatcatcaaaa--cttaaagggtaatgttaaacgcattttgttccaaca 19197519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 33591200 - 33591253
Alignment:
Q  14 cttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaaca 66  Q
    |||||||||||||||||||| || || || ||||||||||||||||||||||||    
T  33591200 cttgttatcatcaaaactcttaagggttaatgttaaacacattttgttccaaca 33591253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 6713507 - 6713568
Alignment:
Q  4 tttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    ||||||||| ||||||||||||||||  |||||||| | ||||||| |||||||||||||||||    
T  6713507 tttttaataccttgttatcatcaaaa--ctcaaaggataatgttaagcacattttgttccaaca 6713568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 13298091 - 13298024
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt--atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||  ||||| |   ||| ||||||||||||||||||||    
T  13298091 caatttttaataccttgttatcatcaaaactcataaaggtttattgtgaaacacattttgttccaaca 13298024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 14955894 - 14955966
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaacatactat 72  Q
    ||||||||||||  |||||||||| |||||| | || || || ||||||||||||||||||||||||| ||||    
T  14955894 caatttttaatactttgttatcattaaaacttttaagggttaatgttaaacacattttgttccaacattctat 14955966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 5216425 - 5216492
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaacat 67  Q
    ||||||||||||  ||||||||||||||||||| || || | | ||||||||||| ||||||||||||    
T  5216425 caatttttaatactttgttatcatcaaaactcttaagggttaacgttaaacacatcttgttccaacat 5216492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 9510610 - 9510562
Alignment:
Q  17 gttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaaca 66  Q
    ||||||||||||||||  |||||||| ||||||||||||||||||||||||    
T  9510610 gttatcatcaaaactc--aaagggtaatgttaaacacattttgttccaaca 9510562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 9518585 - 9518537
Alignment:
Q  17 gttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaaca 66  Q
    ||||||||||||||||  |||||||| ||||||||||||||||||||||||    
T  9518585 gttatcatcaaaactc--aaagggtaatgttaaacacattttgttccaaca 9518537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 29951161 - 29951098
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    ||||||||||||  ||||||||||||||||||| ||||||| |||||  ||||||||||||||||||    
T  29951161 caatttttaatacattgttatcatcaaaactct-aaagggtaatgtt--acacattttgttccaaca 29951098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 30000315 - 30000252
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    ||||||||||||  ||||||||||||||||||| ||||||| |||||  ||||||||||||||||||    
T  30000315 caatttttaatacattgttatcatcaaaactct-aaagggtaatgtt--acacattttgttccaaca 30000252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 37467741 - 37467804
Alignment:
Q  5 ttttaatatcttgttatcatcaaaactctc-aaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||| | ||||||||||||||||||| ||||||| |||||||||| ||||||||| ||||    
T  37467741 ttttaataccgtgttatcatcaaaactctcaaaagggtaatgttaaacaaattttgttctaaca 37467804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 46828507 - 46828574
Alignment:
Q  2 aatttttaatatcttgttatcatcaaaactctcaaagggtat-gttaaacacattttgttccaacata 68  Q
    |||||||||||  ||||||||||||||||| | || || ||| | |||||||||||||||||||||||    
T  46828507 aatttttaatactttgttatcatcaaaacttttaagggttattgctaaacacattttgttccaacata 46828574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 2785530 - 2785596
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    ||||||||||||  ||||||||||||||||||| || || | | ||||||||||||||||| |||||    
T  2785530 caatttttaatactttgttatcatcaaaactcttaagggttaacgttaaacacattttgtttcaaca 2785596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 11223986 - 11224048
Alignment:
Q  5 ttttaatatcttgttatcatcaaaactctcaa-agggtatgttaaacacattttgttccaaca 66  Q
    |||||||| ||||||||||||||||||||||| ||   || ||||||||||||| ||||||||    
T  11223986 ttttaataccttgttatcatcaaaactctcaagagttaatattaaacacattttattccaaca 11224048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 23757906 - 23757936
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaact 31  Q
    |||||||||||||||||||||||||||||||    
T  23757906 caatttttaatatcttgttatcatcaaaact 23757936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 26417408 - 26417349
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttc 61  Q
    |||||||||||| ||||||||||||||||  ||| |||||| || |||||||||||||||||    
T  26417408 caatttttaataccttgttatcatcaaaa--ctcgaagggtaatattaaacacattttgttc 26417349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 2902970 - 2902909
Alignment:
Q  5 ttttaatatcttgttatcatcaaaactctcaaagggtatgttaaacacattttgttccaaca 66  Q
    ||||||||||||||||||||||||||||  ||||    |||||||  |||||||||||||||    
T  2902970 ttttaatatcttgttatcatcaaaactcaaaaagacattgttaaatccattttgttccaaca 2902909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 14008024 - 14008086
Alignment:
Q  3 atttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaaca 66  Q
    ||||||||||  |||||||||||||||||   ||| |||| ||||||||||||||||||||||||    
T  14008024 atttttaatactttgttatcatcaaaacta--aaatggtaatgttaaacacattttgttccaaca 14008086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 28169687 - 28169715
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaa 29  Q
    |||||||||||||||||||||||||||||    
T  28169687 caatttttaatatcttgttatcatcaaaa 28169715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 15098 - 15164
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  15098 caatttttaataccttgttatcatcaaaactctcaaagggtaatgttaaacacattttgttccaaca 15164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 1298 - 1360
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttcc 62  Q
    |||||||||||| ||| |||||||||||||||||||| | | |||||||||||||||||||||    
T  1298 caatttttaataccttattatcatcaaaactctcaaaagttaatgttaaacacattttgttcc 1360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 10375 - 10441
Alignment:
Q  2 aatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaacat 67  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  10375 aatttttaataccttgttatcatcaaaactctcaaagggtaatgttaaacacattttgttccaacat 10441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 36450 - 36384
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  36450 caatttttaataccttgttatcatcaaaactctcaaagggtaatgttaaacacattttgttccaaca 36384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 42555 - 42621
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  42555 caatttttaataccttgttatcatcaaaactctcaaagggtaatgttaaacacattttgttccaaca 42621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 3183 - 3249
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  3183 caatttttaataccttgttatcatcaaaactctcaaagggtaatgttaaacacattttgttccaaca 3249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 2140 - 2206
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  2140 caatttttaataccttgttatcatcaaaactctcaaagggtaatgttaaacacattttgttccaaca 2206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 1e-22; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 39696614 - 39696680
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  39696614 caatttttaatatcttgttatcatcaaaactctcaaagggtaatgttaaacatattttgttccaaca 39696680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 19156614 - 19156676
Alignment:
Q  5 ttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaaca 66  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  19156614 ttttaataccttgttatcatcaaaactctcaaagggtagtgttaaacacattttgttccaaca 19156676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 20382118 - 20382052
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  20382118 caatttttaataccttgttatcatcaaaactctcaaaggttaatgttaaacacattttgttccaaca 20382052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 22745899 - 22745965
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  22745899 caatttttaataccttattatcatcaaaactctcaaagggtaatgttaaacacattttgttccaaca 22745965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 23263325 - 23263259
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  23263325 caatttttaataccttgttatcatcaaaactcttaaagggtaatgttaaacacattttgttccaaca 23263259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 29693746 - 29693812
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  29693746 caatttttaataccttgttatcatcaaaactctcaaaggataatgttaaacacattttgttccaaca 29693812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 17914888 - 17914953
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggtatgttaaacacattttgttccaaca 66  Q
    |||||||||||| ||||||||||||||||||| ||||||  |||||||||||||||||||||||||    
T  17914888 caatttttaataccttgttatcatcaaaactcacaaaggtaatgttaaacacattttgttccaaca 17914953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 18685133 - 18685068
Alignment:
Q  2 aatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    ||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  18685133 aatttttaataccttgttatcatcaaaactcttaaagggtaatgttaaacacattttgttccaaca 18685068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 18730698 - 18730633
Alignment:
Q  2 aatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    ||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  18730698 aatttttaataccttgttatcatcaaaactcttaaagggtaatgttaaacacattttgttccaaca 18730633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 16681028 - 16680962
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||||||||||||||||| |||  ||||||||| |||||||||||||||||||||||||    
T  16681028 caatttttaatatcttgttatcatcagaaccttcaaagggtaatgttaaacacattttgttccaaca 16680962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 20255287 - 20255225
Alignment:
Q  5 ttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  20255287 ttttaataccttgttatcatcaaaactctcaaagggtaatgttcaacacattttgttccaaca 20255225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 21933328 - 21933394
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| ||||||||||| |||||||||||||||| ||||||||| |||||||||||||||    
T  21933328 caatttttaataccttgttatcataaaaactctcaaagggtaatgttaaacgcattttgttccaaca 21933394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 18320913 - 18320849
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaa 64  Q
    ||||||||||||  |||||||||||||||||||||||| || |||||||||||||||||||||||    
T  18320913 caatttttaatacattgttatcatcaaaactctcaaagagtaatgttaaacacattttgttccaa 18320849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 19707937 - 19708004
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaacata 68  Q
    ||||||||||||| ||||||||||||||||||| ||||| | |||||||||||||||||||||||||||    
T  19707937 caatttttaatattttgttatcatcaaaactct-aaaggttaatgttaaacacattttgttccaacata 19708004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 43645220 - 43645283
Alignment:
Q  4 tttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaacat 67  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  43645220 tttttaataccttgttatcatcaaaactct-aaagggtaatgttaaacacattttgttccaacat 43645283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 17267904 - 17267967
Alignment:
Q  5 ttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaacat 67  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||||||||  |||||||||    
T  17267904 ttttaataccttgttatcatcaaaactctcaaagggtaatgttaaacacatttatttccaacat 17267967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 33083293 - 33083360
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaacat 67  Q
    ||||||||||||||||||||||||||||||||| |||| | | ||||||||||||||| |||||||||    
T  33083293 caatttttaatatcttgttatcatcaaaactcttaaagagcagtgttaaacacattttcttccaacat 33083360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 16189428 - 16189494
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||| ||||||| |||||| |||||||| |||||||||||||||||||||||||    
T  16189428 caatttttaataccttgctatcatctaaactcacaaagggtaatgttaaacacattttgttccaaca 16189494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 17441545 - 17441479
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| ||||| || ||||||||||||||||||| ||||||||||||||| |||||||||    
T  17441545 caatttttaataacttgtcataatcaaaactctcaaagggtaatgttaaacacatttggttccaaca 17441479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 17797851 - 17797917
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaaca 66  Q
    |||||||| ||| ||||||||||||||||||||||| || || ||||||||||||||||||||||||    
T  17797851 caattttttataccttgttatcatcaaaactctcaagggttagtgttaaacacattttgttccaaca 17797917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 18120842 - 18120780
Alignment:
Q  5 ttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||| |||||||||||||||||||||||||||| |||| ||| ||||||||||||||||    
T  18120842 ttttaataccttgttatcatcaaaactctcaaagggtaatgtcaaatacattttgttccaaca 18120780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 24646766 - 24646832
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||| ||||| | ||||||||||||| |||||||||||    
T  24646766 caatttttaataccttgttatcatcaaaactcttaaaggttaatgttaaacacatattgttccaaca 24646832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 602457 - 602395
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaa 64  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||  ||||||||||||||||    
T  602457 caatttttaatatcttgttatcatcaaaactcttaaagggtaatgtt--acacattttgttccaa 602395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 17525452 - 17525395
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacatttt 57  Q
    |||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||    
T  17525452 caatttttaataccttgttatcatcaaaactctcaaaaggtaatgttaaacacatttt 17525395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 45538177 - 45538113
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaa 64  Q
    |||||||||||| |||||||||||||||||||| || || | |||||||||||||||||||||||    
T  45538177 caatttttaataccttgttatcatcaaaactcttaagggttaatgttaaacacattttgttccaa 45538113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 18773062 - 18773126
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| ||||||||||||||||  |||||||||| |||||||| ||||||||||||||||    
T  18773062 caatttttaataccttgttatcatcaaaa--ctcaaagggtaatgttaaatacattttgttccaaca 18773126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 19956066 - 19956000
Alignment:
Q  4 tttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaacatact 70  Q
    ||||||||| ||| |||||||||||||||| |||||||| ||||||||||||||| ||||||||||||    
T  19956066 tttttaataccttattatcatcaaaactct-aaagggtaatgttaaacacattttattccaacatact 19956000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 23184961 - 23184898
Alignment:
Q  4 tttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    ||||||||| |||||||||||||||||  ||||||||| |||||||||| ||||||||||||||    
T  23184961 tttttaataccttgttatcatcaaaaccttcaaagggtaatgttaaacatattttgttccaaca 23184898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 15335764 - 15335698
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaaca 66  Q
    ||||||||||||  ||||||||||||||||||| || || || ||||||||||||||||||||||||    
T  15335764 caatttttaatactttgttatcatcaaaactcttaagggttaatgttaaacacattttgttccaaca 15335698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 15424829 - 15424763
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaaca 66  Q
    ||||||||||||  ||||||||||||||||||| || || || ||||||||||||||||||||||||    
T  15424829 caatttttaatactttgttatcatcaaaactcttaagggttaatgttaaacacattttgttccaaca 15424763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 15516133 - 15516067
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaaca 66  Q
    ||||||||||||  ||||||||||||||||||| || || || ||||||||||||||||||||||||    
T  15516133 caatttttaatactttgttatcatcaaaactcttaagggttaatgttaaacacattttgttccaaca 15516067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 18719395 - 18719458
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggtatgttaaacacattttgttccaaca 66  Q
    ||||||||||||  ||||||||||||||||||  |||||  |||||||||||||||||||||||||    
T  18719395 caatttttaatacattgttatcatcaaaactc--aaaggtaatgttaaacacattttgttccaaca 18719458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 17702155 - 17702212
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacatttt 57  Q
    ||||||||||||  ||||||||||||||||||| ||||||| ||||||||||||||||    
T  17702155 caatttttaatacattgttatcatcaaaactcttaaagggtaatgttaaacacatttt 17702212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 18680227 - 18680280
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggtatgttaaacacat 54  Q
    |||||||||||| |||||||||||||||||||||||| |  |||||||||||||    
T  18680227 caatttttaataccttgttatcatcaaaactctcaaaagtaatgttaaacacat 18680280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 23352806 - 23352745
Alignment:
Q  4 tttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    ||||||||| ||||||||||||||||  |||||||||| ||||||| |||||||||||||||||    
T  23352806 tttttaataccttgttatcatcaaaa--ctcaaagggtaatgttaagcacattttgttccaaca 23352745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 2811249 - 2811316
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactc-tcaaagggta-tgttaaacacattttgttccaaca 66  Q
    |||||||||||| ||||||||||||||||||| | ||||  || ||||||||||||||||||||||||    
T  2811249 caatttttaataccttgttatcatcaaaactctttaaagtttattgttaaacacattttgttccaaca 2811316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 22461346 - 22461282
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    ||||||||||||  |||||||||||||||  |||||||||| ||||||||||||| |||||||||||    
T  22461346 caatttttaatactttgttatcatcaaaa--ctcaaagggtaatgttaaacacatattgttccaaca 22461282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 30421160 - 30421097
Alignment:
Q  4 tttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    ||||||||| |||||||||||||||||  ||||||| | |||||||||| ||||||||||||||    
T  30421160 tttttaataccttgttatcatcaaaaccttcaaaggataatgttaaacatattttgttccaaca 30421097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 3598051 - 3597985
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaaca 66  Q
    ||||||||||||  ||||||||||||||||||| ||  | || ||||||||||||||||||||||||    
T  3598051 caatttttaatacattgttatcatcaaaactctgaagagttaatgttaaacacattttgttccaaca 3597985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 9321016 - 9321082
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| ||||||||||||| |||||| || || | |||||||||||||||| ||||||||    
T  9321016 caatttttaataccttgttatcatcataactcttaagggttaatgttaaacacatttttttccaaca 9321082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 24551726 - 24551792
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaaca 66  Q
    ||||||||||||  || |||||||||||||||| || || || ||||||||||||||||||||||||    
T  24551726 caatttttaatacatttttatcatcaaaactcttaagggttaatgttaaacacattttgttccaaca 24551792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 19943666 - 19943707
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggta 42  Q
    |||||||||||| ||| |||||||||||||||||||||||||    
T  19943666 caatttttaataccttattatcatcaaaactctcaaagggta 19943707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 26833485 - 26833551
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaacata 68  Q
    ||||||||||||  |||||||||||||||  |||||||||| ||| |||||||||||| ||||||||||    
T  26833485 caatttttaatactttgttatcatcaaaa--ctcaaagggtaatgctaaacacatttttttccaacata 26833551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 18722353 - 18722313
Alignment:
Q  2 aatttttaatatcttgttatcatcaaaactctcaaagggta 42  Q
    ||||||||||| |||||||||||||||||||| ||||||||    
T  18722353 aatttttaataccttgttatcatcaaaactcttaaagggta 18722313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 24832777 - 24832710
Alignment:
Q  1 caatttttaata-tcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaaca 66  Q
    |||||||||||| | || |||||||||||||||| || || || ||||||||||||||||||||||||    
T  24832777 caatttttaatactttttttatcatcaaaactcttaagggttaatgttaaacacattttgttccaaca 24832710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 32087931 - 32087900
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactc 32  Q
    ||||||||||||||||||||||||||||||||    
T  32087931 caatttttaatatcttgttatcatcaaaactc 32087900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 40845092 - 40845025
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaacat 67  Q
    ||||||||||||  |||||||||||||||||||  | || || || ||||||||||||||||||||||    
T  40845092 caatttttaataatttgttatcatcaaaactcttgagggttattgctaaacacattttgttccaacat 40845025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 1238098 - 1238130
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactct 33  Q
    |||||||||||| ||||||||||||||||||||    
T  1238098 caatttttaataccttgttatcatcaaaactct 1238130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 7018044 - 7018016
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaa 29  Q
    |||||||||||||||||||||||||||||    
T  7018044 caatttttaatatcttgttatcatcaaaa 7018016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 21288827 - 21288896
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggta----tgttaaacacattttgttccaaca 66  Q
    ||||||||||||  ||||||||||||||||||| ||||| ||    ||||||||  ||||||||||||||    
T  21288827 caatttttaatactttgttatcatcaaaactcttaaaggttattattgttaaacgtattttgttccaaca 21288896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 21301446 - 21301515
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggta----tgttaaacacattttgttccaaca 66  Q
    ||||||||||||  ||||||||||||||||||| || || ||    ||||||||| ||||||||||||||    
T  21301446 caatttttaatactttgttatcatcaaaactcttaagggttattattgttaaacatattttgttccaaca 21301515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 1e-22; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 13137649 - 13137583
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  13137649 caatttttaataccttgttatcatcaaaactctcaaagggtaatgttaaacacattttgttccaaca 13137583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 21695803 - 21695869
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  21695803 caatttttaatatcttgttatcatcaaaactcttaaagggtaatgttaaacacattttgttccaaca 21695869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 30026325 - 30026390
Alignment:
Q  2 aatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  30026325 aatttttaataccttgttatcatcaaaactctcaaagggtaatgttaaacacattttgttccaaca 30026390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 10882895 - 10882831
Alignment:
Q  5 ttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaacata 68  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  10882895 ttttaataccttgttatcatcaaaactctcaaagggtaatgttaaacacattttgttccaacata 10882831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 13730435 - 13730367
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaacata 68  Q
    |||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  13730435 caatttttaataccttgttatcatcaaaactcttaaagggtaatgttaaacacattttgttccaacata 13730367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 13692774 - 13692841
Alignment:
Q  2 aatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaacata 68  Q
    ||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  13692774 aatttttaataccttgttatcatcaaaactcttaaagggtaatgttaaacacattttgttccaacata 13692841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 2913346 - 2913280
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  2913346 caatttttaataccttgttatcatcaaaactctcaaagggtaatgttaaacacatttttttccaaca 2913280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 5000579 - 5000513
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  5000579 caatttttaataccttgttatcatcaaaactctcaaatggtaatgttaaacacattttgttccaaca 5000513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 9070006 - 9070072
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  9070006 caatttttaataccttgttatcatcaaaactctcagagggtaatgttaaacacattttgttccaaca 9070072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 13880537 - 13880603
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  13880537 caatttttaataccttgttataatcaaaactctcaaagggtaatgttaaacacattttgttccaaca 13880603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 14193512 - 14193578
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  14193512 caatttttaataccttgttatcatcaaaactctcaaagggtaatgttaaacatattttgttccaaca 14193578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 22577745 - 22577679
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  22577745 caatttttaataccttgttatcatcaaaactcttaaagggtaatgttaaacacattttgttccaaca 22577679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 28409467 - 28409533
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  28409467 caatttttaataccttgttatcatcaaaactcttaaagggtaatgttaaacacattttgttccaaca 28409533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 39284332 - 39284270
Alignment:
Q  5 ttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  39284332 ttttaataccttgttatcatcaaaactctcaaagggtaatgttaaacacattttgttccaaca 39284270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 15088923 - 15088988
Alignment:
Q  2 aatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  15088923 aatttttaataccttgttatcatcaaaactctcaaagggtaatgttaaaaacattttgttccaaca 15088988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 4494906 - 4494970
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaa 64  Q
    |||||||||||| |||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  4494906 caatttttaataccttgttatcatcaaaactctcaaagggtaatattaaacacattttgttccaa 4494970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 9097964 - 9097897
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaacata 68  Q
    |||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  9097964 caatttttaataccttgttatcatcaaaactct-aaagggtagtgttaaacacattttgttccaacata 9097897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 44467483 - 44467550
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaacat 67  Q
    |||||||||||| |||||||||||||||||||| |||| || ||||||||||||||||||||||||||    
T  44467483 caatttttaataccttgttatcatcaaaactcttaaagagtaatgttaaacacattttgttccaacat 44467550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 15469900 - 15469966
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| ||| |||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  15469900 caatttttaataccttattatcatcaaaactctcaaagggtaatgttaaacaccttttgttccaaca 15469966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 19236739 - 19236673
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaaca 66  Q
    |||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||| |||||||||    
T  19236739 caatttttaataccttgttatcgtcaaaactctcaaagggtagtgttaaacacatttggttccaaca 19236673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 23279765 - 23279699
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||| | |||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  23279765 caatttttaacaccttgttattatcaaaactctcaaagggtaatgttaaacacattttgttccaaca 23279699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 13260348 - 13260283
Alignment:
Q  2 aatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    ||||||||||| | |||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  13260348 aatttttaataccatgttatcatcaaaactctcaaagggtaatgttaaacatattttgttccaaca 13260283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 13303257 - 13303321
Alignment:
Q  5 ttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaacata 68  Q
    |||||||| ||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  13303257 ttttaataccttattatcatcaaaactttcaaagggtaatgttaaacacattttgttccaacata 13303321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 23390754 - 23390686
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaacata 68  Q
    |||||||||||| |||||||||||||||||||| || || | |||||||||||||||||||||||||||    
T  23390754 caatttttaataccttgttatcatcaaaactcttaagggttaatgttaaacacattttgttccaacata 23390686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 24788485 - 24788553
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaacata 68  Q
    ||||||||||||  ||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||    
T  24788485 caatttttaatacattgttatcaacaaaactcttaaagggtaatgttaaacacattttgttccaacata 24788553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 2500458 - 2500525
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaacat 67  Q
    |||||||||||| | |||||||||||||||||| ||||||| |||||||| |||||||||||||||||    
T  2500458 caatttttaataccatgttatcatcaaaactcttaaagggtaatgttaaatacattttgttccaacat 2500525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 9070088 - 9070148
Alignment:
Q  2 aatttttaatatcttgttatcatcaaaactctcaaagggtatgttaaacacattttgttccaaca 66  Q
    |||||||||||||||||||||||||||||| ||||||||||    ||||||||||||||||||||    
T  9070088 aatttttaatatcttgttatcatcaaaactttcaaagggta----aaacacattttgttccaaca 9070148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 13890687 - 13890621
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggtatgttaaacacattttgttccaacata 68  Q
    ||||||||||||  ||||||||||||||||||| |||||  |||||||||||||||||||||||||||    
T  13890687 caatttttaatactttgttatcatcaaaactct-aaaggtaatgttaaacacattttgttccaacata 13890621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 33691451 - 33691384
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgtt-aaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||||||||| | ||||| ||||||||||||||||||||    
T  33691451 caatttttaataccttgttatcatcaaaactctcaaaggataatgttaaaacacattttgttccaaca 33691384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 11793341 - 11793395
Alignment:
Q  2 aatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacatt 55  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  11793341 aatttttaataccttgttatcatcaaaactctcaaagggtaatgttaaacacatt 11793395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 13649132 - 13649198
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||| ||| ||| |||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  13649132 caattttttataccttattatcatcaaaactcttaaagggtaatgttaaacacattttgttccaaca 13649198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 16316297 - 16316235
Alignment:
Q  5 ttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||| |||||||||||||||||||||||||| | ||||||||||||||||||| |||||    
T  16316297 ttttaataccttgttatcatcaaaactctcaaaggataatgttaaacacattttgtttcaaca 16316235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 30944083 - 30944017
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| ||||||||||||||||||||||| || | || ||||||||||||||||||||||    
T  30944083 caatttttaataccttgttatcatcaaaactctcaagggttaattttaaacacattttgttccaaca 30944017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 30945116 - 30945050
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| ||||||||||||||||||||||| || | |||||||| ||||||||||||||||    
T  30945116 caatttttaataccttgttatcatcaaaactctcaagggttaatgttaaatacattttgttccaaca 30945050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 33606119 - 33606185
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| ||| ||||||||||||||||||| || | |||||||||||||||||||||||||    
T  33606119 caatttttaataccttcttatcatcaaaactctcaagggttaatgttaaacacattttgttccaaca 33606185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 9709559 - 9709498
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggtatgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||||||||||||     |||||||||||||||||||    
T  9709559 caatttttaataccttgttatcatcaaaactctcaaagggta----caacacattttgttccaaca 9709498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 66
Target Start/End: Original strand, 11319851 - 11319903
Alignment:
Q  15 ttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  11319851 ttgttatcatcaaaactctcaaagggtaatgttaaacatattttgttccaaca 11319903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 41842031 - 41841963
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaa-agggtatgttaaacacattttgttccaacata 68  Q
    |||||||||||| ||||||||||| ||||||||||| ||   |||||||||||||||||||||||||||    
T  41842031 caatttttaataccttgttatcataaaaactctcaacagataatgttaaacacattttgttccaacata 41841963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 7487603 - 7487539
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| ||||||||||||||||  |||||||||| ||||||||| |||||||||||||||    
T  7487603 caatttttaataccttgttatcatcaaaa--ctcaaagggtaatgttaaactcattttgttccaaca 7487539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 13881029 - 13881095
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaacat 67  Q
    ||||||||| |||||||||||||| |||||||| ||||| || |||||||||||||||||||||||||    
T  13881029 caatttttagtatcttgttatcattaaaactct-aaaggttaatgttaaacacattttgttccaacat 13881095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 16111607 - 16111536
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaacatacta 71  Q
    |||||||||||| |||||||||||||||| ||| || || || |||||||||||||||||||||||| ||||    
T  16111607 caatttttaataccttgttatcatcaaaattcttaagggttaatgttaaacacattttgttccaacaaacta 16111536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 16556528 - 16556465
Alignment:
Q  4 tttttaatatcttgttatcatcaaaactctcaa-agggtatgttaaacacattttgttccaaca 66  Q
    ||||||||| ||||||||||||||||||||||| ||   |||||||||||||||||||||||||    
T  16556528 tttttaataccttgttatcatcaaaactctcaagagttaatgttaaacacattttgttccaaca 16556465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 16609134 - 16609197
Alignment:
Q  4 tttttaatatcttgttatcatcaaaactctcaa-agggtatgttaaacacattttgttccaaca 66  Q
    ||||||||| ||||||||||||||||||||||| ||   |||||||||||||||||||||||||    
T  16609134 tttttaataccttgttatcatcaaaactctcaagagttaatgttaaacacattttgttccaaca 16609197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 28622092 - 28622025
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaacat 67  Q
    |||||||||||| |||||||||||||||| |||||| || | || |||||||||||||||||||||||    
T  28622092 caatttttaataccttgttatcatcaaaattctcaagggttaatattaaacacattttgttccaacat 28622025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 332083 - 332149
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||| || |  || ||||||||||||||||||||||||    
T  332083 caatttttaataccttgttatcatcaaaactcttaaggtttattgttaaacacattttgttccaaca 332149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 14426946 - 14427012
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaa-agggtatgttaaacacattttgttccaaca 66  Q
    |||||||||||| ||||||||||||||||||||||| ||   ||||||||||||||| |||||||||    
T  14426946 caatttttaataccttgttatcatcaaaactctcaagagttaatgttaaacacatttcgttccaaca 14427012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 19710724 - 19710658
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaaca 66  Q
    ||||||||||||||||||||||||||||||| | || |  || ||||||||||||||||||||||||    
T  19710724 caatttttaatatcttgttatcatcaaaactattaaggtttattgttaaacacattttgttccaaca 19710658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 35952395 - 35952329
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    ||||||||||||| ||||||||||||||||||| || || | ||||||||||||||||||| |||||    
T  35952395 caatttttaatattttgttatcatcaaaactcttaagggttaatgttaaacacattttgttacaaca 35952329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 12174047 - 12173983
Alignment:
Q  3 atttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||| |||||||||||||||||||| || || | | |||||||||||||||||||||||    
T  12174047 atttttaataccttgttatcatcaaaactcttaagggttaacgttaaacacattttgttccaaca 12173983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 12366471 - 12366414
Alignment:
Q  5 ttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttcca 63  Q
    |||||||| |||||||||||||||||||||  ||||| ||||||||||||||||||||||    
T  12366471 ttttaataccttgttatcatcaaaactctc--agggtaatgttaaacacattttgttcca 12366414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 13031812 - 13031748
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaa 64  Q
    ||||||||||||  ||||||||||||||||  ||||||||| |||||||||| ||||||||||||    
T  13031812 caatttttaatactttgttatcatcaaaacattcaaagggtaatgttaaacatattttgttccaa 13031748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 2265256 - 2265190
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggtat-gttaaacacattttgttccaaca 66  Q
    ||||||||||||  ||||||||||||||||| | || || ||| |||||||||||||||||||||||    
T  2265256 caatttttaatactttgttatcatcaaaacttttaagggttatcgttaaacacattttgttccaaca 2265190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 15701015 - 15700949
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    ||||||||||||  ||||||||||||||||||| || || | | |||||||||||||||||||||||    
T  15701015 caatttttaatactttgttatcatcaaaactcttaagggttaacgttaaacacattttgttccaaca 15700949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 14304107 - 14304045
Alignment:
Q  3 atttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||| ||||||||||||||||  || ||||||| ||||||||| |||||||||||||||    
T  14304107 atttttaataccttgttatcatcaaaa--ctaaaagggtaatgttaaactcattttgttccaaca 14304045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 4821908 - 4821974
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt--atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||| |||||||| ||||||  |||||| ||||||||||||| ||||    
T  4821908 caatttttaataccttgttatcatcgaaactctc-aagggtcaatgttacacacattttgttctaaca 4821974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 13018249 - 13018186
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||  ||||||||| ||||   ||||||||||||||||||    
T  13018249 caatttttaataccttgttatcatcaaaacattcaaagggtaatgt---acacattttgttccaaca 13018186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 11572021 - 11571964
Alignment:
Q  5 ttttaatatcttgttatcatcaaaactctcaaagggtatgttaaacacattttgttcc 62  Q
    |||||||| |||||||||||||||||||  | |||  ||||||||| |||||||||||    
T  11572021 ttttaataccttgttatcatcaaaactcaaagaggcaatgttaaactcattttgttcc 11571964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 13172126 - 13172064
Alignment:
Q  4 tttttaatatcttgttatcatcaaaactctcaaag-ggta-tgttaaacacattttgttccaaca 66  Q
    ||||||||| ||||||||||||||||  ||||||| |||| ||| ||||||||||||||||||||    
T  13172126 tttttaataccttgttatcatcaaaa--ctcaaagtggtattgtcaaacacattttgttccaaca 13172064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 23126323 - 23126383
Alignment:
Q  5 ttttaatatcttgttatcatcaaaactctcaaagggtatgttaaacacattttgttccaaca 66  Q
    ||||||||| |||||||||||||| |||  | |||  |||||||||||||||||||||||||    
T  23126323 ttttaatattttgttatcatcaaa-ctcaaagaggcaatgttaaacacattttgttccaaca 23126383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 48800366 - 48800301
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggtatgttaaacacattttgttccaaca 66  Q
    ||||||||||||  ||||||||||||| ||  ||||||   |||||||||||| ||||||||||||    
T  48800366 caatttttaatacattgttatcatcaagaccttcaaagataatgttaaacacactttgttccaaca 48800301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 4428778 - 4428746
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactct 33  Q
    |||||||||||| ||||||||||||||||||||    
T  4428778 caatttttaataccttgttatcatcaaaactct 4428746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 29935102 - 29935043
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgtt 60  Q
    |||||||||||| |||||||||||| ||||||| ||||| | ||||||||| |||||||||    
T  29935102 caatttttaataccttgttatcatc-aaactcttaaaggataatgttaaacgcattttgtt 29935043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 1e-22; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 23412711 - 23412645
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  23412711 caatttttaataccttgttatcatcaaaactctcaaagggtaatgttaaacacattttgttccaaca 23412645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 12352538 - 12352474
Alignment:
Q  3 atttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  12352538 atttttaataccttgttatcatcaaaactctcaaagggtaatgttaaacacattttgttccaaca 12352474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 89157 - 89091
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  89157 caatttttaataccttgttatcatcaaaactctcaaagagtaatgttaaacacattttgttccaaca 89091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 19536005 - 19535939
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  19536005 caatttttaataccttgttatcatcaaaactttcaaagggtaatgttaaacacattttgttccaaca 19535939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 21910960 - 21911026
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  21910960 caatttttaataccttattatcatcaaaactctcaaagggtaatgttaaacacattttgttccaaca 21911026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 7745367 - 7745299
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaacata 68  Q
    |||||||||||| |||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||    
T  7745367 caatttttaataccttgttatcatcaaaaatcttaaagggtgatgttaaacacattttgttccaacata 7745299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 20551295 - 20551361
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||| ||||||||||||||||||| ||||||||||||| |||||||||||    
T  20551295 caatttttaataccttgttatgatcaaaactctcaaagggtaatgttaaacacatcttgttccaaca 20551361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 33023084 - 33023149
Alignment:
Q  4 tttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaacata 68  Q
    ||||||||| |||||||||||||||||  ||||||||| |||||||||||||||||||||||||||    
T  33023084 tttttaataccttgttatcatcaaaaccttcaaagggtaatgttaaacacattttgttccaacata 33023149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 17815400 - 17815468
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaacata 68  Q
    |||||||||||| |||||||||||||||||  ||||||| | |||||||||||||||||||||||||||    
T  17815400 caatttttaataccttgttatcatcaaaaccttcaaaggataatgttaaacacattttgttccaacata 17815468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 6512169 - 6512102
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaacat 67  Q
    |||||||||||| |||||||||||||||||  ||||||||| |||||||||| |||||||||||||||    
T  6512169 caatttttaataccttgttatcatcaaaaccttcaaagggtaatgttaaacagattttgttccaacat 6512102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 26784773 - 26784840
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaacat 67  Q
    |||||||||||  |||||||||||||||||||| ||||| | ||||||||||||||||||||||||||    
T  26784773 caatttttaattccttgttatcatcaaaactcttaaaggataatgttaaacacattttgttccaacat 26784840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 9398465 - 9398399
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| ||| |||||||||||||||||||| ||| |||||||||| ||||||||||||||    
T  9398465 caatttttaataccttattatcatcaaaactctcaaaaggtcatgttaaacatattttgttccaaca 9398399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 21099411 - 21099346
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaaca 66  Q
    ||||||||||||  |||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  21099411 caatttttaatacattgttatcatcaaa-ctctcaaagggtaatgttaaacacattttgttccaaca 21099346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 31118292 - 31118358
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| ||||||||||||||||||||||| || | ||||||||||||||||||| |||||    
T  31118292 caatttttaataccttgttatcatcaaaactctcaagggttaatgttaaacacattttgtttcaaca 31118358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 42244133 - 42244195
Alignment:
Q  4 tttttaatatcttgttatcatcaaaactctcaaagggtatgttaaacacattttgttccaaca 66  Q
    |||||||||  ||||||||||||||||||| || || ||||||||||||||||||||||||||    
T  42244133 tttttaatactttgttatcatcaaaactcttaagggttatgttaaacacattttgttccaaca 42244195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 642414 - 642346
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaacata 68  Q
    |||||||||||| ||| |||| ||||||||||||||||||| ||||||||| |||||| ||||||||||    
T  642414 caatttttaataccttattattatcaaaactctcaaagggtaatgttaaacccattttattccaacata 642346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 4887439 - 4887507
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaacata 68  Q
    ||||||||||||  ||||||||||||||||||| || || || ||||||||||||||||||||||||||    
T  4887439 caatttttaatactttgttatcatcaaaactcttaagggttaatgttaaacacattttgttccaacata 4887507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 5430296 - 5430360
Alignment:
Q  3 atttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||| |||||||||||||||||||| || || | |||||||||||||||||||||||||    
T  5430296 atttttaataccttgttatcatcaaaactcttaagggttaatgttaaacacattttgttccaaca 5430360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 22403815 - 22403751
Alignment:
Q  4 tttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaacatac 69  Q
    ||||||||||||||||||||||||||  |||||||||| |||||| ||||||||| |||||||||||    
T  22403815 tttttaatatcttgttatcatcaaaa--ctcaaagggtaatgttacacacattttattccaacatac 22403751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 14086255 - 14086193
Alignment:
Q  5 ttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaaca 66  Q
    ||||||||||||||||||||||||||||| || |  || ||||||||||||||||||||||||    
T  14086255 ttttaatatcttgttatcatcaaaactcttaaggattagtgttaaacacattttgttccaaca 14086193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 41566162 - 41566096
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    ||||||||||||  || |||||||||||||| ||||||||| |||| ||||||||||||||||||||    
T  41566162 caatttttaatactttattatcatcaaaactttcaaagggtaatgtcaaacacattttgttccaaca 41566096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 25096525 - 25096458
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacac--attttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||| |||||||| ||||||||||  ||||||||||||||    
T  25096525 caatttttaataccttgttatcatcaaaactct-aaagggtaatgttaaacacatattttgttccaaca 25096458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 25154495 - 25154428
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacac--attttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||| |||||||| ||||||||||  ||||||||||||||    
T  25154495 caatttttaataccttgttatcatcaaaactct-aaagggtaatgttaaacacatattttgttccaaca 25154428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 6499655 - 6499723
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaacata 68  Q
    |||||||||||| | |||||||||||||||  ||||||||| || ||||||| ||||||||||||||||    
T  6499655 caatttttaataccctgttatcatcaaaacattcaaagggtaatattaaacatattttgttccaacata 6499723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 21198757 - 21198689
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaacata 68  Q
    |||||||||||  ||| |||||||||||||||  |||||||| ||||||||||||||| ||||||||||    
T  21198757 caatttttaatgccttattatcatcaaaactcataaagggtaatgttaaacacattttattccaacata 21198689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 28140006 - 28140073
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaacat 67  Q
    ||||||||||||  ||||||||| ||||||||| ||||| || || ||||||||||||||||||||||    
T  28140006 caatttttaatactttgttatcaacaaaactcttaaaggttattgctaaacacattttgttccaacat 28140073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 21071961 - 21071895
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||||||| |||||||||||||||| |||| || |  ||||||||||||| ||||||||    
T  21071961 caatttttaatatcttattatcatcaaaactcttaaagagtaacattaaacacattttattccaaca 21071895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 23296024 - 23295956
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgtt-aaacacattttgttccaacat 67  Q
    ||||||||||||||||||||||||||||||||   |||| | || || |||||||||||||||||||||    
T  23296024 caatttttaatatcttgttatcatcaaaactcaataaggttcattttgaaacacattttgttccaacat 23295956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 34638905 - 34638964
Alignment:
Q  7 ttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||| |||||||||||||||||||  ||||||| |||||||||||||||| ||||||||    
T  34638905 ttaataccttgttatcatcaaaactc-aaaagggtaatgttaaacacattttattccaaca 34638964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 33933758 - 33933820
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttcc 62  Q
    ||||||||||||  ||||||||||||||||||| || |  | |||||||||||||||||||||    
T  33933758 caatttttaatactttgttatcatcaaaactcttaaggattaatgttaaacacattttgttcc 33933820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 1e-22; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 23036161 - 23036095
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  23036161 caatttttaataccttgttatcatcaaaactctcaaagggtaatgttaaacacattttgttccaaca 23036095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 26701789 - 26701723
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  26701789 caatttttaataccttgttatcatcaaaactctcaaagggtaatgttaaacacattttgttccaaca 26701723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 22201478 - 22201410
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaacata 68  Q
    |||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  22201478 caatttttaatacctttttatcatcaaaactctcaaagggtaatgttaaacacattttgttccaacata 22201410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 12613440 - 12613374
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  12613440 caatttttaataccttgttattatcaaaactctcaaagggtaatgttaaacacattttgttccaaca 12613374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 30893498 - 30893564
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  30893498 caatttttaataccttgttatcatcaaaactctcaaagggtaatgttaaacacattttattccaaca 30893564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 32785596 - 32785530
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  32785596 caatttctaataccttgttatcatcaaaactctcaaagggtaatgttaaacacattttgttccaaca 32785530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 29216219 - 29216284
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaac 65  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  29216219 caatttttaataccttgttatcatcaaaactctcaaagggtaatgttaaacatattttgttccaac 29216284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 1578272 - 1578336
Alignment:
Q  4 tttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaacat 67  Q
    ||||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  1578272 tttttaataccttgttatcatcaaaactctcaaagggtaacgttaaacacattttgttccaacat 1578336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 10757840 - 10757908
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaacata 68  Q
    |||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||    
T  10757840 caatttttaataccttgttatcatcaaaactcttaaagggtaatgttaaacacattttgtttcaacata 10757908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 16234954 - 16234891
Alignment:
Q  2 aatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaa 64  Q
    ||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  16234954 aatttttaataccttgttatcatcaaaactcttaaagggtaatgttaaacacattttgttccaa 16234891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 25448014 - 25447948
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||||||||| | |||||||||| ||||||||||||||    
T  25448014 caatttttaataccttgttatcatcaaaactctcaaaggttaatgttaaacatattttgttccaaca 25447948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 35402255 - 35402321
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| ||||||||||||||| ||||||||| || |||||||||||||||||||||||||    
T  35402255 caatttttaataccttgttatcatcaaatctctcaaagagtaatgttaaacacattttgttccaaca 35402321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 38283019 - 38283085
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||| ||||    
T  38283019 caatttttaataccttgttatcatcaaaactctcaaagggtaatgtcaaacacattttgttcaaaca 38283085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 48704639 - 48704701
Alignment:
Q  5 ttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||| |||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  48704639 ttttaataccttgttatcatcaaaactctcaaaggataatgttaaacacattttgttccaaca 48704701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 7310237 - 7310305
Alignment:
Q  2 aatttttaatatcttgttatcatcaaaactctcaaagggt--atgttaaacacattttgttccaacata 68  Q
    ||||||||||||||||||||||| |||||||||||||| |   ||||||||||||||||||||||||||    
T  7310237 aatttttaatatcttgttatcattaaaactctcaaaggtttattgttaaacacattttgttccaacata 7310305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 22464435 - 22464370
Alignment:
Q  2 aatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    ||||||||||| |||||||||||||||||||||||||| | |||||||||| ||||||||||||||    
T  22464435 aatttttaataccttgttatcatcaaaactctcaaaggttaatgttaaacatattttgttccaaca 22464370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 12284876 - 12284944
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaacata 68  Q
    |||||||||||| ||| |||||||||||||||| ||| |||| ||||||||||||||||||||||||||    
T  12284876 caatttttaataccttattatcatcaaaactcttaaaaggtaatgttaaacacattttgttccaacata 12284944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 22599821 - 22599758
Alignment:
Q  4 tttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    ||||||||| |||||||||||||||||| ||||||||| ||||||||||||||||||| |||||    
T  22599821 tttttaataccttgttatcatcaaaactttcaaagggtaatgttaaacacattttgtttcaaca 22599758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 33255996 - 33255925
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaacatacta 71  Q
    |||||||||||| ||||||||||||||||  || |||||||| |||||||||||||||||||||||| ||||    
T  33255996 caatttttaataccttgttatcatcaaaatccttaaagggtaatgttaaacacattttgttccaacacacta 33255925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 33276168 - 33276097
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaacatacta 71  Q
    |||||||||||| ||||||||||||||||  || |||||||| |||||||||||||||||||||||| ||||    
T  33276168 caatttttaataccttgttatcatcaaaatccttaaagggtaatgttaaacacattttgttccaacacacta 33276097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 1900769 - 1900835
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    ||||||||||||  ||||| ||||||||||||||||||||| |||| ||||||||||||||||||||    
T  1900769 caatttttaatacattgttttcatcaaaactctcaaagggtaatgtcaaacacattttgttccaaca 1900835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 2268964 - 2269030
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||| | ||||| | |||||||||||||||||||||||||    
T  2268964 caatttttaataccttgttatcatcaaaacttttaaaggataatgttaaacacattttgttccaaca 2269030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 2835126 - 2835192
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| ||||||||||||||||||||||| || | ||||||||||||||||| |||||||    
T  2835126 caatttttaataccttgttatcatcaaaactctcaagggttaatgttaaacacattttgatccaaca 2835192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 17400974 - 17401040
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||| ||||||||||||||||||||||| ||| |||||| ||||||||||||||    
T  17400974 caatttttaataccttggtatcatcaaaactctcaaagggtaatggtaaacatattttgttccaaca 17401040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 36134610 - 36134676
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    ||||||||||||  ||||||||||||||||| ||| ||||| |||||||||||||||||||||||||    
T  36134610 caatttttaatactttgttatcatcaaaactatcagagggtaatgttaaacacattttgttccaaca 36134676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 20909869 - 20909931
Alignment:
Q  3 atttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||| ||||||||||||||||  |||||||||| |||||||||||||||||||||||||    
T  20909869 atttttaataccttgttatcatcaaaa--ctcaaagggtaatgttaaacacattttgttccaaca 20909931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 39200669 - 39200608
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggtatgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||| ||||||||    ||||||||||||||||||||    
T  39200669 caatttttaataccttgttatcatcaaaactcttaaagggta----aaacacattttgttccaaca 39200608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 18896226 - 18896162
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| ||||||||||||||||  |||||||| | |||||||||||||||||||||||||    
T  18896226 caatttttaataccttgttatcatcaaaa--ctcaaaggataatgttaaacacattttgttccaaca 18896162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 25448177 - 25448110
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaacat 67  Q
    ||||||||||||  ||||||||||||||||||| || || || |||||||||||||||||||||||||    
T  25448177 caatttttaatactttgttatcatcaaaactcttaagggttaatgttaaacacattttgttccaacat 25448110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 22154310 - 22154376
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||| ||||||| || || ||||||||||||| |||||    
T  22154310 caatttttaataccttgttatcatcaaaactcttaaagggtaatttttaacacattttgtttcaaca 22154376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 22427002 - 22426936
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| ||||||||||| |||||||| ||||| | |||||||||| ||||||||||||||    
T  22427002 caatttttaataccttgttatcattaaaactcttaaaggataatgttaaacatattttgttccaaca 22426936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 17024660 - 17024602
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgt 59  Q
    |||||||||||| |||||||||||||||||| | |||||||| |||||||||||||||||    
T  17024660 caatttttaataccttgttatcatcaaaactgt-aaagggtaatgttaaacacattttgt 17024602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 20954098 - 20954034
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||| |||||||  |||||||||| || ||||||||||||||||||||||    
T  20954098 caatttttaataccttgttataatcaaaa--ctcaaagggtaatcttaaacacattttgttccaaca 20954034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 28492076 - 28492029
Alignment:
Q  5 ttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaaca 51  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||    
T  28492076 ttttaatatcttgttatcatcaaaactctcaaaggataatgttaaaca 28492029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 21191519 - 21191454
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaaca 66  Q
    |||||||||||| ||||||||| |||||||| | |||||||| ||||| ||||||||||||||||||    
T  21191519 caatttttaataccttgttatcctcaaaacttt-aaagggtaatgttagacacattttgttccaaca 21191454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 676015 - 676083
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt--atgttaaacacattttgttccaacat 67  Q
    ||||||||||||||||||||||||||||||||   |||| |   ||| |||||||||||||||||||||    
T  676015 caatttttaatatcttgttatcatcaaaactcattaaggtttattgtgaaacacattttgttccaacat 676083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 2819001 - 2818940
Alignment:
Q  5 ttttaatatcttgttatcatcaaaactctcaaagggtatgttaaacacattttgttccaaca 66  Q
    ||||||||| ||||||||||||||||||  | |||  |||||||||| ||||||||||||||    
T  2819001 ttttaatattttgttatcatcaaaactcaaagaggcaatgttaaacatattttgttccaaca 2818940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 19717941 - 19717998
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacatttt 57  Q
    |||||||||||  |||||||||||||||||  ||||||||| ||||||||||||||||    
T  19717941 caatttttaattccttgttatcatcaaaaccttcaaagggtaatgttaaacacatttt 19717998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 1090184 - 1090123
Alignment:
Q  3 atttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaac 65  Q
    |||||||||| ||||||||||||||| |||  ||||| || |||||||||||||||||||||||    
T  1090184 atttttaataccttgttatcatcaaagctc--aaaggataatgttaaacacattttgttccaac 1090123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 23580014 - 23579947
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt--atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||  ||||| |   ||| ||||||||||||||||||||    
T  23580014 caatttttaataccttgttatcatcaaaactcaaaaaggttcattgtgaaacacattttgttccaaca 23579947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 23927472 - 23927539
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt--atgttaaacacattttgttccaaca 66  Q
    ||||||||||||||||||||||||||||||||   |||| |   ||| ||||||||||||||||||||    
T  23927472 caatttttaatatcttgttatcatcaaaactcattaaggtttattgtaaaacacattttgttccaaca 23927539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 35040571 - 35040637
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||| ||||||||||| |  || | |||||||||| ||||||||||||||    
T  35040571 caatttttaataccttgttattatcaaaactcttatgggttaatgttaaacatattttgttccaaca 35040637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 44821186 - 44821120
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaaca 66  Q
    ||||||||||||  ||||||||||||||||||| ||  | || || |||||||||||||||||||||    
T  44821186 caatttttaatactttgttatcatcaaaactcttaagtgttattgctaaacacattttgttccaaca 44821120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 18615353 - 18615415
Alignment:
Q  3 atttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    ||||||||||  |||||||||||||||  |||||||||| ||  |||||||||||||||||||||    
T  18615353 atttttaatacattgttatcatcaaaa--ctcaaagggtaataataaacacattttgttccaaca 18615415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 32
Target Start/End: Complemental strand, 20109608 - 20109579
Alignment:
Q  3 atttttaatatcttgttatcatcaaaactc 32  Q
    ||||||||||||||||||||||||||||||    
T  20109608 atttttaatatcttgttatcatcaaaactc 20109579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 2327051 - 2327019
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactct 33  Q
    |||||||||||| ||||||||||||||||||||    
T  2327051 caatttttaataccttgttatcatcaaaactct 2327019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 31
Target Start/End: Original strand, 16870391 - 16870419
Alignment:
Q  3 atttttaatatcttgttatcatcaaaact 31  Q
    |||||||||||||||||||||||||||||    
T  16870391 atttttaatatcttgttatcatcaaaact 16870419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 31359699 - 31359763
Alignment:
Q  4 tttttaatatcttgttatcatcaaaactctcaaagggtatgttaaacacattttgttccaacata 68  Q
    ||||||||| |||||||||||||||| ||  | |||   |||||||| |||||||||||||||||    
T  31359699 tttttaataccttgttatcatcaaaattcaaagaggcattgttaaactcattttgttccaacata 31359763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 34255153 - 34255121
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactct 33  Q
    |||||||||||| ||||||||||||||||||||    
T  34255153 caatttttaataccttgttatcatcaaaactct 34255121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 19147 - 19082
Alignment:
Q  2 aatttttaatatcttgttatcatcaaaactctcaaaggg-tatgttaaacacattttgttccaaca 66  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  19147 aatttttaataccttgttatcatcaaaactctcaaagggttatgttaaacacattttgttccaaca 19082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 30259 - 30319
Alignment:
Q  5 ttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||| ||||||||||||||||  |||||||||| |||||||||||||||| ||||||||    
T  30259 ttttaataccttgttatcatcaaaa--ctcaaagggtaatgttaaacacattttcttccaaca 30319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 53; Significance: 2e-21; HSPs: 4)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 30544 - 30480
Alignment:
Q  3 atttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  30544 atttttaataccttgttatcatcaaaactctcaaagggtaatgttaaacacattttgttccaaca 30480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 377246 - 377182
Alignment:
Q  4 tttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaacat 67  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  377246 tttttaatatcttgttatcatcaaaactcttaaagggtaatgttaaacacattttgttccaacat 377182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 220675 - 220737
Alignment:
Q  5 ttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  220675 ttttaataccttgttatcatcaaaactctcaaagggtaatgttaaacacattttgttcgaaca 220737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 243929 - 243864
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  243929 caatttttaataccttgttatcatcaaaactct-aaagggtaatgttaaacacattttgttccaaca 243864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0485 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 9051 - 8985
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    ||||||||||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||    
T  9051 caatttttaatatcttgttatcaccaaaactctgaaagggtaatgttaaacacattttgttccaaca 8985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0426 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 14048 - 14114
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  14048 caatttttaataccttgttatcatcaaaactctcaaagggtaaagttaaacacattttgttccaaca 14114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 19471 - 19537
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  19471 caatttttaataccttgttatcatcaaaactctcaaaggataatgttaaacacattttgttccaaca 19537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 9813 - 9747
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||||    
T  9813 caatttttaataccttgtaatcatcaaaactctcaaagggtaatgttaaacacattttgttccaaca 9747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 51; Significance: 2e-20; HSPs: 4)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 115956 - 116022
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||| ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  115956 caatttttcataccttgttatcatcaaaactctcaaagggtaatgttaaacacattttgttccaaca 116022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 8333 - 8399
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||| |||| || |||||||||||||||||||||||||    
T  8333 caatttttaataccttgttatcatcaaaactcttaaagtgtaatgttaaacacattttgttccaaca 8399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 151577 - 151511
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaaca 66  Q
    |||||||| ||| ||||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  151577 caattttttataccttgttatcatcaaaactctcaaagggtagtgctaaacacattttgttccaaca 151511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 66
Target Start/End: Original strand, 60452 - 60513
Alignment:
Q  6 tttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaaca 66  Q
    |||||||  ||||||||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  60452 tttaataaattgttatcatctaaactcttaaagggtaatgttaaacacattttgttccaaca 60513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 2e-20; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 3498063 - 3498129
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  3498063 caatttttaataccttgttatcatcaaaactctcaaagggtaatgttaaacatattttgttccaaca 3498129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 16632869 - 16632935
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  16632869 caatttttaataccttgttatcatcaaaactctcaaaggttaatgttaaacacattttgttccaaca 16632935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 19620773 - 19620707
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  19620773 caatttttaataccttgttattatcaaaactctcaaagggtaatgttaaacacattttgttccaaca 19620707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 19885121 - 19885187
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  19885121 caatttttaataccttgttatcatcaaaactctcaaagggtaatgttaaacacatttagttccaaca 19885187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 22089965 - 22090031
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  22089965 caatttttaataccttgttatcatcaaaactctcaaagggtaatgttaaacacattttgttctaaca 22090031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 23750871 - 23750937
Alignment:
Q  2 aatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaacat 67  Q
    ||||||||||| |||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  23750871 aatttttaataccttgttatcatcaaaactctcaaagggtaatattaaacacattttgttccaacat 23750937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 37985472 - 37985410
Alignment:
Q  5 ttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  37985472 ttttaataccttgttatcatcaaaactctcaaagggtaatgttaaacacattttgttccaaca 37985410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 40846516 - 40846583
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaacat 67  Q
    |||||||||||| |||||||||||||||||  ||||||||| ||||||||||||||||||||||||||    
T  40846516 caatttttaataccttgttatcatcaaaacattcaaagggtaatgttaaacacattttgttccaacat 40846583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 37435202 - 37435136
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||| ||||||||||| ||||||| |||||||||||||||||||||||||    
T  37435202 caatttttaataccttgttataatcaaaactctgaaagggtaatgttaaacacattttgttccaaca 37435136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 10693284 - 10693352
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaa-agggtatgttaaacacattttgttccaacata 68  Q
    |||||||||||| ||||||||||||||||||||||| ||   |||||||||||||||||||||||||||    
T  10693284 caatttttaataccttgttatcatcaaaactctcaagagttaatgttaaacacattttgttccaacata 10693352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 10907050 - 10907118
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaa-agggtatgttaaacacattttgttccaacata 68  Q
    |||||||||||| ||||||||||||||||||||||| ||   |||||||||||||||||||||||||||    
T  10907050 caatttttaataccttgttatcatcaaaactctcaagagttaatgttaaacacattttgttccaacata 10907118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 3398289 - 3398356
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaacat 67  Q
    |||||||||||| |||||||| ||||||| ||| ||||||| ||||||||||||||||||||||||||    
T  3398289 caatttttaataccttgttatgatcaaaattcttaaagggtaatgttaaacacattttgttccaacat 3398356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 11901653 - 11901717
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| ||||||||||||||||  |||||||||| |||||||||||||||||||||||||    
T  11901653 caatttttaataccttgttatcatcaaaa--ctcaaagggtaatgttaaacacattttgttccaaca 11901717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 12810875 - 12810812
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttcca 63  Q
    ||||||||||||  || |||||||||||||||||||||||| ||||||||||||||||||||||    
T  12810875 caatttttaatacttttttatcatcaaaactctcaaagggtaatgttaaacacattttgttcca 12810812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 41114428 - 41114362
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaacat 67  Q
    ||||||||||||  ||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  41114428 caatttttaatacattgttatcatcaaaactct-aaagggtaatgttaaacacattttgttccaacat 41114362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 9141292 - 9141358
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||| ||| |||| || |||||||||||||||||||||||||    
T  9141292 caatttttaataccttgttatcatcaaaagtcttaaagagtaatgttaaacacattttgttccaaca 9141358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 12417285 - 12417222
Alignment:
Q  3 atttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaacat 67  Q
    |||||||||| |||||||||||||||||||  |||||||| |||||||||||||||||||||||||    
T  12417285 atttttaataccttgttatcatcaaaactc--aaagggtaatgttaaacacattttgttccaacat 12417222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 14904000 - 14903934
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| ||||||||||| | |||||||||||||| |||| ||||||||||||||||||||    
T  14904000 caatttttaataccttgttatcattacaactctcaaagggtaatgtcaaacacattttgttccaaca 14903934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 29121804 - 29121870
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||| || || | |||||||||||||||||||||||||    
T  29121804 caatttttaataccttgttatcatcaaaactcttaagggttaatgttaaacacattttgttccaaca 29121870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 54680327 - 54680393
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaa-agggtatgttaaacacattttgttccaaca 66  Q
    |||||||||||| ||||||||||||||||||||||| ||   |||||||||||||||||||||||||    
T  54680327 caatttttaataccttgttatcatcaaaactctcaagagttaatgttaaacacattttgttccaaca 54680393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 55380672 - 55380738
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||| | ||||||| | |||||||||||||||||||||||||    
T  55380672 caatttttaataccttgttatcatcaaaattttcaaaggataatgttaaacacattttgttccaaca 55380738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 13575826 - 13575765
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggtatgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||||||||||||     |||||||||||||||||||    
T  13575826 caatttttaataccttgttatcatcaaaactctcaaagggta----caacacattttgttccaaca 13575765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 17787712 - 17787647
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaacat 67  Q
    ||||||| |||| |||||||||||||||||||  |||||||| |||||||||||||||||||||||||    
T  17787712 caattttcaataccttgttatcatcaaaactc--aaagggtaatgttaaacacattttgttccaacat 17787647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 11916157 - 11916218
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttcca 63  Q
    |||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||||||    
T  11916157 caatttttaatatcttgttatcatcaaaac-ct-aaagggtagtgttaaacacattttgttcca 11916218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 413438 - 413504
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaa-agggtatgttaaacacattttgttccaaca 66  Q
    ||||||||||||  |||||||||||||||||||||| ||   |||||||||||||||||||||||||    
T  413438 caatttttaatacattgttatcatcaaaactctcaagagttaatgttaaacacattttgttccaaca 413504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 3793520 - 3793586
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||| || || | ||||||||||||||| |||||||||    
T  3793520 caatttttaataccttgttatcatcaaaactctgaagggttaatgttaaacacatttagttccaaca 3793586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 12601526 - 12601592
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    ||||||||||||  || |||||||||||||||||||||||| |||||||||||||||| || |||||    
T  12601526 caatttttaatactttattatcatcaaaactctcaaagggtaatgttaaacacattttattacaaca 12601592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 14153658 - 14153592
Alignment:
Q  2 aatttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaacat 67  Q
    ||||||||||| |||||||||||||||||||| || |  || |||||||||||||||||||||||||    
T  14153658 aatttttaataccttgttatcatcaaaactcttaaggtttattgttaaacacattttgttccaacat 14153592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 15139662 - 15139720
Alignment:
Q  4 tttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttc 61  Q
    ||||||||| | ||||||||||||||| |||||||||| ||||||||||||||||||||    
T  15139662 tttttaataccatgttatcatcaaaacactcaaagggtaatgttaaacacattttgttc 15139720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 19911621 - 19911555
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaaca 66  Q
    ||||||||||||  |||||||||||||||||||||||||||| | |||||| ||||||||| |||||    
T  19911621 caatttttaatacattgttatcatcaaaactctcaaagggtagtattaaacgcattttgtttcaaca 19911555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 22675229 - 22675170
Alignment:
Q  5 ttttaatatcttgttatcatcaaaactctcaaagggtatgttaaacacattttgttccaacata 68  Q
    ||||||||||||||||| ||||||||||||||||||||    ||||| ||||||||||||||||    
T  22675229 ttttaatatcttgttattatcaaaactctcaaagggta----aaacatattttgttccaacata 22675170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 55732224 - 55732290
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    ||||||||||||  ||||||||||||||||||| || || | |||||||||||||||||||||||||    
T  55732224 caatttttaatactttgttatcatcaaaactcttaagggttaatgttaaacacattttgttccaaca 55732290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 10250264 - 10250326
Alignment:
Q  4 tttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaacat 67  Q
    ||||||||| ||||||||||||||||||   |||||||| |||||||||||||||||||||||||    
T  10250264 tttttaataccttgttatcatcaaaactt--aaagggtaatgttaaacacattttgttccaacat 10250326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 8106096 - 8106164
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaacata 68  Q
    ||||||||| | ||||||||||||||||||||| || || | ||| |||||||||||||||||||||||    
T  8106096 caatttttagtgtcttgttatcatcaaaactcttaagggttaatgataaacacattttgttccaacata 8106164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 10660861 - 10660797
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaaca 66  Q
    |||||||||||| ||||||||||  |||||||  |||||||| ||||||||||||||||||||||||    
T  10660861 caatttttaataccttgttatcactaaaactc--aaagggtaatgttaaacacattttgttccaaca 10660797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 10875006 - 10874942
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaaca 66  Q
    |||||||||||| ||||||||||  |||||||  |||||||| ||||||||||||||||||||||||    
T  10875006 caatttttaataccttgttatcactaaaactc--aaagggtaatgttaaacacattttgttccaaca 10874942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 17540859 - 17540919
Alignment:
Q  5 ttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaaca 66  Q
    |||||||| ||||||| |||||||||||  |||||||| ||||||||||||||||||||||||    
T  17540859 ttttaataccttgttaacatcaaaactc--aaagggtaatgttaaacacattttgttccaaca 17540919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 45833830 - 45833884
Alignment:
Q  4 tttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacatttt 57  Q
    |||| |||| |||||||| ||||||||||||||||||| ||||||||||||||||    
T  45833830 ttttgaataccttgttatgatcaaaactctcaaagggtaatgttaaacacatttt 45833884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 14604588 - 14604547
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggta 42  Q
    ||||| |||||| |||||||||||||||||||||||||||||    
T  14604588 caattcttaataccttgttatcatcaaaactctcaaagggta 14604547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 29680239 - 29680175
Alignment:
Q  2 aatttttaatatctt-gttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaa 64  Q
    ||||||||||| ||| ||||| |||||||||||||||| || |||||||||| ||||||||||||    
T  29680239 aatttttaatacctttgttattatcaaaactctcaaagcgtaatgttaaacatattttgttccaa 29680175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 39419420 - 39419351
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggta----tgttaaacacattttgttccaaca 66  Q
    ||||||||||||| |||||||| |||||||||| || || ||    ||||||||||||||||||||||||    
T  39419420 caatttttaatattttgttatcttcaaaactcttaagggttattattgttaaacacattttgttccaaca 39419351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 14833823 - 14833874
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaaca 51  Q
    |||||||||||| |||||||||||||||||||| ||| ||| ||||||||||    
T  14833823 caatttttaataccttgttatcatcaaaactctaaaaaggtaatgttaaaca 14833874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 6642130 - 6642179
Alignment:
Q  17 gttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    ||||||||||||| ||| ||||||| |||||||||||||||||||||||||    
T  6642130 gttatcatcaaaattct-aaagggtaatgttaaacacattttgttccaaca 6642179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 17247690 - 17247756
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||| ||| | ||||||||||||||||||||||| || | ||| |||||| ||||||||||||||    
T  17247690 caatttgtaaaaccttgttatcatcaaaactctcaagggttaatgctaaacatattttgttccaaca 17247756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 22191272 - 22191343
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggta----tgttaaacacattttgttccaacata 68  Q
    ||||||||||||  ||||||||||||||||||| ||||| ||    ||||||||| |||||||| |||||||    
T  22191272 caatttttaatactttgttatcatcaaaactcttaaaggttattattgttaaacaaattttgtttcaacata 22191343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 5874031 - 5874095
Alignment:
Q  4 tttttaatatcttgttatcatcaaaactctcaaagggt--atgttaaacacattttgttccaaca 66  Q
    ||||||||| ||||||||||||||||||| | |||| |   ||| ||||||||||||||||||||    
T  5874031 tttttaataccttgttatcatcaaaactcactaaggtttattgtgaaacacattttgttccaaca 5874095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1782 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold1782
Description:

Target: scaffold1782; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 699 - 631
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaacata 68  Q
    |||||||||||| ||||||||||||||||||||  |||||| |||||||||||||||||||||||||||    
T  699 caatttttaataccttgttatcatcaaaactcttgaagggtaatgttaaacacattttgttccaacata 631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1782; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 778 - 844
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaacat 67  Q
    |||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||| |||||||||    
T  778 caatttttaataccttgttatcatcaaaactct-aaagggtaatgttaaacacattttattccaacat 844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 12650 - 12709
Alignment:
Q  5 ttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttcca 63  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  12650 ttttaataccttgttatcatcaaaactctcaaagggtaatgttaaacacattttgttcca 12709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 13205 - 13142
Alignment:
Q  4 tttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  13205 tttttaataccttgttatcatcaaaactctcaaagggtaatgttaaatacattttgttccaaca 13142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 52945 - 53008
Alignment:
Q  4 tttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    ||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  52945 tttttaataccttgttatcatcaaaactcttaaagggtaatgttaaacacattttgttccaaca 53008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 56897 - 56960
Alignment:
Q  4 tttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    ||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  56897 tttttaataccttgttatcatcaaaactcttaaagggtaatgttaaacacattttgttccaaca 56960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0861 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0861
Description:

Target: scaffold0861; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 4621 - 4555
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||| ||||    
T  4621 caatttttaataccttgttatcatcaaaactctcaaagggtaatgttaaacacatttagttctaaca 4555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 10230 - 10296
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||| | ||||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  10230 caatttttaagaccttgttatcatcaaaactctcaatgggtaatgttaaacacattttgttccaaca 10296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 18295 - 18229
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||| ||||    
T  18295 caatttttaataccttgttatcatcaaaactctcaaagggtaatgtcaaacacattttgttctaaca 18229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 8126 - 8192
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||| ||||||||    
T  8126 caatttttaataccttgttatcatcaaaactttcaaagggtaatgttaaacacattttcttccaaca 8192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 23097 - 23163
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| ||| |||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  23097 caatttttaatacctttttatcatcaaaactctcaaagggtaatgttaaacatattttgttccaaca 23163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 60555 - 60493
Alignment:
Q  5 ttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  60555 ttttaataccttgttatcatgaaaactctcaaagggtaatgttaaacacattttgttccaaca 60493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 89746 - 89680
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||||||||| | |||||||||| ||||||||||||||    
T  89746 caatttttaataccttgttatcatcaaaactctcaaaggttaatgttaaacatattttgttccaaca 89680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 15523 - 15588
Alignment:
Q  2 aatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    ||||||||||| ||| |||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  15523 aatttttaataccttattatcatcaaaactcttaaagggtaatgttaaacacattttgttccaaca 15588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 10311 - 10376
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggtatgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||| ||||||| |||||  |||||||||||||||||||||||||    
T  10311 caatttttaataccttgttatcatccaaactctaaaaggtaatgttaaacacattttgttccaaca 10376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 30657 - 30708
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaaca 51  Q
    |||||||||||| |||||||||||||||||||| ||| ||| ||||||||||    
T  30657 caatttttaataccttgttatcatcaaaactctaaaaaggtaatgttaaaca 30708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1359 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold1359
Description:

Target: scaffold1359; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 363 - 297
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaa-agggtatgttaaacacattttgttccaaca 66  Q
    |||||||||||| ||||||||||||||||||||||| ||   |||||||||||||||||||||||||    
T  363 caatttttaataccttgttatcatcaaaactctcaagagttaatgttaaacacattttgttccaaca 297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 27747 - 27682
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaaca 66  Q
    |||||||||||| ||||||| ||||||||||||||||||||| |||||| |||||||||||||||||    
T  27747 caatttttaataccttgttaacatcaaaactctcaaagggtaatgttaa-cacattttgttccaaca 27682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 9234 - 9168
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||| ||| ||||||||||| |||||||| ||||||||||||||||||||||||    
T  9234 caatttttaataccttgctattatcaaaactcttaaagggtattgttaaacacattttgttccaaca 9168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 269164 - 269229
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaacat 67  Q
    |||||||||||| ||||||||||||||||  |||||||| | ||||||||||||||||||||||||||    
T  269164 caatttttaataccttgttatcatcaaaa--ctcaaaggttaatgttaaacacattttgttccaacat 269229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0479 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 66
Target Start/End: Original strand, 10379 - 10440
Alignment:
Q  6 tttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    ||||||| |||||||||||||||||||| ||||||| |||||||||| ||||||||||||||    
T  10379 tttaataccttgttatcatcaaaactcttaaagggtaatgttaaacagattttgttccaaca 10440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 32856 - 32921
Alignment:
Q  2 aatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    ||||||||||| |||||||||||||||||  ||||||||| |||||||||||||||||||| ||||    
T  32856 aatttttaataccttgttatcatcaaaaccttcaaagggtaatgttaaacacattttgttctaaca 32921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 49754 - 49820
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    ||||||| |||| |||||||||||||||||  ||||||||| |||||||||  ||||||||||||||    
T  49754 caattttcaataccttgttatcatcaaaaccttcaaagggtaatgttaaacttattttgttccaaca 49820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0908 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0908
Description:

Target: scaffold0908; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 3544 - 3476
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaacata 68  Q
    |||||||||||| |||||||||||||||||||| || |  || ||||||||||||||||||||||||||    
T  3544 caatttttaataccttgttatcatcaaaactcttaaggtttattgttaaacacattttgttccaacata 3476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 145306 - 145370
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    ||||||||||||  ||||||||||||||||||  ||||||| |||||||||||||||||||||||||    
T  145306 caatttttaatacattgttatcatcaaaactc--aaagggtgatgttaaacacattttgttccaaca 145370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 7746 - 7812
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||| || |  || ||||||||||||||||||||||||    
T  7746 caatttttaataccttgttatcatcaaaactcttaaggtttattgttaaacacattttgttccaaca 7812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 5284 - 5218
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||||||||| || || | ||| |||||||||||||||||||||    
T  5284 caatttttaataccttgttatcatcaaaactcttaagggttaatgataaacacattttgttccaaca 5218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 39848 - 39913
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||| ||||||||| ||||||| ||||| |||||||||||||||||||    
T  39848 caatttttaataccttgttatcaccaaaactcttaaagggtaatgtt-aacacattttgttccaaca 39913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 137908 - 137973
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||| ||||||||| ||||||| ||||| |||||||||||||||||||    
T  137908 caatttttaataccttgttatcaccaaaactcttaaagggtaatgtt-aacacattttgttccaaca 137973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 159509 - 159576
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaacata 68  Q
    ||||||||||||  ||||||||||||||||||| ||||||| ||||||||||||  ||||| |||||||    
T  159509 caatttttaatactttgttatcatcaaaactct-aaagggtaatgttaaacacacattgttacaacata 159576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 143527 - 143593
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||||||||| | ||| ||||||| |||||||| ||||||||||||||||    
T  143527 caatttttaataccttgttatcatcaagaatcttaaagggtaatgttaaatacattttgttccaaca 143593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 3091 - 3153
Alignment:
Q  3 atttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaaca 66  Q
    |||||||||| ||||||||||||||||  |||| |||||| ||||||||||||||||||||||||    
T  3091 atttttaataccttgttatcatcaaaa--ctcatagggtactgttaaacacattttgttccaaca 3153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 2067 - 2124
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacatttt 57  Q
    |||||||||||| |||||||||||||||||||| ||| ||| ||||||||||||||||    
T  2067 caatttttaataccttgttatcatcaaaactcttaaaaggtaatgttaaacacatttt 2124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0916 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0916
Description:

Target: scaffold0916; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 2309 - 2248
Alignment:
Q  4 tttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    ||||||||| ||||||||||||||||  |||||||||| |||||||| ||||||||||||||||    
T  2309 tttttaataccttgttatcatcaaaa--ctcaaagggtaatgttaaatacattttgttccaaca 2248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 1266 - 1324
Alignment:
Q  5 ttttaatatcttgttatcatcaaaactctcaaaggg---tatgttaaacacattttgtt 60  Q
    |||||||| |||||||||||||||||||||||||||   ||||||||||| ||||||||    
T  1266 ttttaataccttgttatcatcaaaactctcaaagggtaatatgttaaacatattttgtt 1324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 1173 - 1110
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaaca 66  Q
    |||||||||||| ||| |||||||||||   ||||||||||| ||||||||||||||||||||||||    
T  1173 caatttttaatacctttttatcatcaaa---ctcaaagggtaatgttaaacacattttgttccaaca 1110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 41090 - 41152
Alignment:
Q  4 tttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaaca 66  Q
    ||||||||| |||| ||||||||||||||| ||||| || ||||||||||||||||||||||||    
T  41090 tttttaataccttgctatcatcaaaactct-aaaggctaatgttaaacacattttgttccaaca 41152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 31440 - 31376
Alignment:
Q  2 aatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaacat 67  Q
    ||||||||||| ||||||||||||||||  |||||||||| ||||| |||| |||||||||||||||    
T  31440 aatttttaataacttgttatcatcaaaa--ctcaaagggtaatgttgaacagattttgttccaacat 31376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1709 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold1709
Description:

Target: scaffold1709; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 36 - 94
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaa-agggtatgttaaacacattttg 58  Q
    |||||||||||| ||||||||||||||||||||||| ||   |||||||||||||||||    
T  36 caatttttaataccttgttatcatcaaaactctcaagagttaatgttaaacacattttg 94  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1331 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold1331
Description:

Target: scaffold1331; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 285 - 227
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaa-agggtatgttaaacacattttg 58  Q
    |||||||||||| ||||||||||||||||||||||| ||   |||||||||||||||||    
T  285 caatttttaataccttgttatcatcaaaactctcaagagttaatgttaaacacattttg 227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 6382 - 6316
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    ||||||||||||  ||||||||||||||||||| || || | ||||| |||||||||||||||||||    
T  6382 caatttttaatactttgttatcatcaaaactcttaagggttaatgttcaacacattttgttccaaca 6316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 4682 - 4620
Alignment:
Q  5 ttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    |||||||  ||||||||||| |||||||||||||||| || |||||||||||||||| |||||    
T  4682 ttttaattccttgttatcattaaaactctcaaagggtaatattaaacacattttgtttcaaca 4620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 13866 - 13916
Alignment:
Q  17 gttatcatcaaaactctcaaagggt-atgttaaacacattttgttccaaca 66  Q
    ||||||||||||||||||||||| | ||||||||| |||||||||||||||    
T  13866 gttatcatcaaaactctcaaaggataatgttaaacgcattttgttccaaca 13916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 212790 - 212831
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggta 42  Q
    ||||| |||||| |||||||||||||||||||||||||||||    
T  212790 caattcttaataccttgttatcatcaaaactctcaaagggta 212831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 5876 - 5825
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt-atgttaaaca 51  Q
    |||||||||||| |||||||||||||||||||| ||| ||| ||||||||||    
T  5876 caatttttaataccttgttatcatcaaaactctaaaaaggtaatgttaaaca 5825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0795 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0795
Description:

Target: scaffold0795; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 199 - 266
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggt--atgttaaacacattttgttccaaca 66  Q
    ||||||||||||||||||||||||||||||||   |||| |   ||| ||||||||||||||||||||    
T  199 caatttttaatatcttgttatcatcaaaactcaataaggttcattgtgaaacacattttgttccaaca 266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 4855 - 4919
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaaca 66  Q
    |||||||||||| |||||||| || |||||||  |||||||| |||||||||||||||| |||||||    
T  4855 caatttttaataccttgttattattaaaactc--aaagggtaatgttaaacacattttgctccaaca 4919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 67
Target Start/End: Original strand, 16235 - 16286
Alignment:
Q  17 gttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaacat 67  Q
    ||||||||||||||||| |||| ||| ||||||||| |||||||||||||||    
T  16235 gttatcatcaaaactctgaaagtgtaatgttaaacaaattttgttccaacat 16286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 103996 - 104059
Alignment:
Q  4 tttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaaca 66  Q
    ||||||||| |||||||| ||||||||| | ||||| || |||||||||||||| |||||||||    
T  103996 tttttaataccttgttattatcaaaacttttaaaggataatgttaaacacatttggttccaaca 104059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 31; Significance: 0.00000002; HSPs: 3)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 25330 - 25259
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactctcaaagggta----tgttaaacacattttgttccaacata 68  Q
    |||||||||||| |||||||||||||||||||| || |  ||    || |||||||||||||||||||||||    
T  25330 caatttttaataccttgttatcatcaaaactcttaaggattattattgctaaacacattttgttccaacata 25259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 35838 - 35786
Alignment:
Q  14 cttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaaca 66  Q
    |||||||||||||||| ||| |||||||| ||||||| ||||||||||||||||    
T  35838 cttgttatcatcaaaaatct-aaagggtaatgttaaatacattttgttccaaca 35786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 34484 - 34452
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactct 33  Q
    |||||||||||| ||||||||||||||||||||    
T  34484 caatttttaataccttgttatcatcaaaactct 34452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 5624 - 5587
Alignment:
Q  5 ttttaatatcttgttatcatcaaaactctcaaagggta 42  Q
    ||||| || |||||||||||||||||||||||||||||    
T  5624 ttttagtaccttgttatcatcaaaactctcaaagggta 5587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0488 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0488
Description:

Target: scaffold0488; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 11274 - 11210
Alignment:
Q  5 ttttaatatcttgttatcatcaaaactctcaaagggta-tgttaaacacattttgttccaacata 68  Q
    ||||||||  ||| ||||||||||||||| || || || |||||||||||||||||| |||||||    
T  11274 ttttaatactttgctatcatcaaaactcttaagggttaatgttaaacacattttgtttcaacata 11210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 11176 - 11208
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactct 33  Q
    |||||||||||| ||||||||||||||||||||    
T  11176 caatttttaataccttgttatcatcaaaactct 11208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 21076 - 21108
Alignment:
Q  1 caatttttaatatcttgttatcatcaaaactct 33  Q
    |||||||||||| ||||||||||||||||||||    
T  21076 caatttttaataccttgttatcatcaaaactct 21108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 74
Target Start/End: Original strand, 27768 - 27800
Alignment:
Q  42 atgttaaacacattttgttccaacatactatat 74  Q
    ||||||||||||||||||||||||||| |||||    
T  27768 atgttaaacacattttgttccaacatattatat 27800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 30
Target Start/End: Original strand, 116224 - 116252
Alignment:
Q  2 aatttttaatatcttgttatcatcaaaac 30  Q
    |||||||||||||||||||||||||||||    
T  116224 aatttttaatatcttgttatcatcaaaac 116252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University