View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2218-Insertion-7 (Length: 309)
Name: NF2218-Insertion-7
Description: NF2218
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2218-Insertion-7 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 286; Significance: 1e-160; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 8 - 309
Target Start/End: Complemental strand, 32266866 - 32266565
Alignment:
| Q |
8 |
ttctctactatcgttgttgccaagggaggtccattaggcattgccaaaccaaaaagaataggtcctataacaaaatgtaaaccaagcgcgtcgctaatag |
107 |
Q |
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| T |
32266866 |
ttctctactattgttgttgccaagggaggtccattaggcattgccaaaccaaaaagaataggtcctataacaaaatgtaaaccaagcgcgtcgctaatag |
32266767 |
T |
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| Q |
108 |
ctaccataattagaacacccaaaagaacaaagacaacataaatttctttcaaaggttttccaattggtgttctttgaatgataaaccttgccattggtct |
207 |
Q |
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| T |
32266766 |
ctaccataattagaacacccaaaagaacaaagacaacatagatttctttcaaaggttttccaattggtgttctttgaatgataaaccttgccattggtct |
32266667 |
T |
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| Q |
208 |
tacaatgaaaaagaaggataaaatatatacgacgcataaacccaaggcaatgaacgcaaaaaagatatttttaaacttcatagttttgacttgtatttgt |
307 |
Q |
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||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32266666 |
tacaatgaaaaagaaggataaaatatataagacacataaacccaaggcaatgaacgcaaaaaagatatttttaaacttcatagttttgacttgtatttgt |
32266567 |
T |
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| Q |
308 |
ag |
309 |
Q |
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|| |
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| T |
32266566 |
ag |
32266565 |
T |
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