View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2218R-Insertion-7 (Length: 366)

Name: NF2218R-Insertion-7
Description: NF2218R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2218R-Insertion-7
NF2218R-Insertion-7
[»] chr7 (1 HSPs)
chr7 (9-366)||(24134851-24135204)


Alignment Details
Target: chr7 (Bit Score: 288; Significance: 1e-161; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 9 - 366
Target Start/End: Complemental strand, 24135204 - 24134851
Alignment:
Q  9 tgttattgcatagataccttaccgatccgacaatttgtttgaaaattattgaatcgattttcttttcatcagtgttcgtctcataatagagcatcccatg 108  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  24135204 tgttattgcatagataccttgctgatccgacaatttgtttgaaaattattgaatcgattttcttttcatcagcgttcgtctcataatagagcatcccatg 24135105  T
Q  109 actttattggtggggccagtgatttttcacctcttcttggtgggacgagtagttttccacttctccaaagagaggaggaatcacttcccaaggcttatta 208  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||| ||    
T  24135104 actttattggtggggccagtgatttttcacctctccttggtgggacgagtagttttccacttctccaaagag---aggaatcacttcccaaggcttaata 24135008  T
Q  209 gtaattagttcaaaaattcaaatatttttctactatctccaacatggtttgcttggtacgtggtttctccagaattccttgcgaatttttgacgaactat 308  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  24135007 gtaattagttcaaaaattcagatatttttctactatctctaacatggttcgcttggtacgtggtttctcgagaattccttgcgaatttttgacgaactat 24134908  T
Q  309 ttcttaacagtaccgcgaatcggttcacggttctcaggccacccatgcgaattatgta 366  Q
    ||| |||||||| |||||| |||||| |||||||||||||||||||||||||||||||    
T  24134907 ttcataacagta-cgcgaaccggttcgcggttctcaggccacccatgcgaattatgta 24134851  T

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