View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2218_high_11 (Length: 419)

Name: NF2218_high_11
Description: NF2218
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2218_high_11
NF2218_high_11
[»] chr6 (1 HSPs)
chr6 (18-401)||(32238249-32238639)
[»] chr7 (3 HSPs)
chr7 (275-354)||(22660739-22660818)
chr7 (297-354)||(2366377-2366434)
chr7 (270-354)||(47355803-47355886)
[»] chr4 (10 HSPs)
chr4 (268-368)||(2565252-2565352)
chr4 (276-354)||(38433311-38433388)
chr4 (270-354)||(8690207-8690291)
chr4 (275-338)||(10147261-10147324)
chr4 (275-354)||(23661376-23661454)
chr4 (302-345)||(49573155-49573198)
chr4 (276-354)||(56531254-56531332)
chr4 (269-354)||(12820423-12820508)
chr4 (269-354)||(36008267-36008352)
chr4 (302-338)||(23518275-23518311)
[»] chr5 (7 HSPs)
chr5 (270-354)||(14077274-14077357)
chr5 (281-354)||(3102145-3102218)
chr5 (269-354)||(4674833-4674918)
chr5 (281-319)||(9934497-9934535)
chr5 (270-336)||(13862119-13862184)
chr5 (270-316)||(21360391-21360437)
chr5 (270-336)||(32252955-32253020)
[»] chr1 (5 HSPs)
chr1 (270-354)||(9527419-9527503)
chr1 (268-323)||(24119298-24119352)
chr1 (275-321)||(52363013-52363059)
chr1 (277-319)||(22102607-22102649)
chr1 (270-322)||(25270211-25270262)
[»] chr2 (5 HSPs)
chr2 (275-354)||(44187702-44187781)
chr2 (270-320)||(34946036-34946086)
chr2 (269-317)||(41195997-41196045)
chr2 (297-336)||(41711672-41711711)
chr2 (274-354)||(9791913-9791992)
[»] scaffold0002 (1 HSPs)
scaffold0002 (268-354)||(451393-451479)
[»] chr8 (5 HSPs)
chr8 (57-140)||(43665942-43666025)
chr8 (269-354)||(13537329-13537414)
chr8 (269-354)||(13626877-13626962)
chr8 (297-354)||(43468723-43468780)
chr8 (270-354)||(14012605-14012689)
[»] chr3 (1 HSPs)
chr3 (282-354)||(43774190-43774262)


Alignment Details
Target: chr6 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 18 - 401
Target Start/End: Complemental strand, 32238639 - 32238249
Alignment:
Q  18 ttctcatttcaatgtctcaaattctaacaaatattgaattacaggttttaaagcatgcaaagttggaaaagactgtttgggagcacatggtgttttgaga 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32238639 ttctcatttcaatgtctcaaattctaacaaatattgaattacaggttttaaagcatgcaaagttggaaaagactgtttgggagcacatggtgttttgaga 32238540  T
Q  118 gttagcatgggttgctttgtatcctttatcaaataaaatttcaattatgtgcatatatatagtatagtttatggt----nnnnnnnnnnnttatatgata 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||               ||||||||||    
T  32238539 gttagcatgggttgctttgtatcctttatcaaataaaatttcaattatgtgcatatatatagtatggtttatggtaaaaaaaaaaaaaaattatatgata 32238440  T
Q  214 tagtctagtttatggt---nnnnnnnnttatatgggttgcataataagcattatattacgtcctcgtgaacatagttcagttgacaaggataatgcattg 310  Q
    ||||||||||||||||           |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||| |||||    
T  32238439 tagtctagtttatggtaaaaaaaaaaattatatgggttgcataataagcattagattacgtcctcgtgaacatagttcagttaacaaggacaatacattg 32238340  T
Q  311 ttatatgtaggagtcggtgtttgaactctaaacaccccacttatagccattaggctacttgacaacaacaacaaaacaagtattgtattac 401  Q
    ||||||| ||||||||| |||||||| | |||||||||||||||| ||| ||| |||||||||||||||||||||||||| ||||||||||    
T  32238339 ttatatgcaggagtcggggtttgaaccccaaacaccccacttataaccactagactacttgacaacaacaacaaaacaagcattgtattac 32238249  T

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Target: chr7 (Bit Score: 48; Significance: 3e-18; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 275 - 354
Target Start/End: Original strand, 22660739 - 22660818
Alignment:
Q  275 cgtgaacatagttcagttgacaaggataatgcattgttatatgtaggagtcggtgtttgaactctaaacaccccacttat 354  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||| | ||| ||| |||| | |||||||||||||||    
T  22660739 cgtgagcatagttcagttgacagggataatgcattgttatatgtaggggccggggttcgaaccccaaacaccccacttat 22660818  T

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Target: chr7; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 354
Target Start/End: Original strand, 2366377 - 2366434
Alignment:
Q  297 aggataatgcattgttatatgtaggagtcggtgtttgaactctaaacaccccacttat 354  Q
    |||| |||||||| ||||||| ||| ||||| ||| |||||||| |||||||||||||    
T  2366377 aggacaatgcattattatatgcaggggtcggggttcgaactctagacaccccacttat 2366434  T

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Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 354
Target Start/End: Original strand, 47355803 - 47355886
Alignment:
Q  270 gtcctcgtgaacatagttcagttgacaaggataatgcattgttatatgtaggagtcggtgtttgaactctaaacaccccacttat 354  Q
    ||||||||||||||| ||||| ||||| |||| ||||||||||||||| ||| | ||| ||| |||| | | ||| |||||||||    
T  47355803 gtcctcgtgaacataattcagatgacagggat-atgcattgttatatgcaggggccggggttcgaaccccagacatcccacttat 47355886  T

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Target: chr4 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 268 - 368
Target Start/End: Original strand, 2565252 - 2565352
Alignment:
Q  268 acgtcctcgtgaacatagttcagttgacaaggataatgcattgttatatgtaggagtcggtgtttgaactctaaacaccccacttatagccattaggcta 367  Q
    |||||| ||||| ||||| |||||||||| ||| |||||||||||||||| ||| ||||| ||| |||  |  |||||||||||||| |||| |||||||    
T  2565252 acgtccccgtgagcatagctcagttgacagggacaatgcattgttatatgcaggggtcggagttcgaatcccgaacaccccacttattgccactaggcta 2565351  T
Q  368 c 368  Q
    |    
T  2565352 c 2565352  T

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Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 276 - 354
Target Start/End: Original strand, 38433311 - 38433388
Alignment:
Q  276 gtgaacatagttcagttgacaaggataatgcattgttatatgtaggagtcggtgtttgaactctaaacaccccacttat 354  Q
    ||||||||||||||||||| | ||| |||||||| ||||||||||||||||| ||| |||| | | |||||||||||||    
T  38433311 gtgaacatagttcagttgata-ggacaatgcattattatatgtaggagtcggagttcgaaccccagacaccccacttat 38433388  T

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Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 354
Target Start/End: Original strand, 8690207 - 8690291
Alignment:
Q  270 gtcctcgtgaacatagttcagttgacaaggataatgcattgttatatgtaggagtcggtgtttgaactctaaacaccccacttat 354  Q
    |||||||||| ||||| ||||||| |||||| |||||||| ||||||| ||| ||||| ||| |||| |   |||||||||||||    
T  8690207 gtcctcgtgagcatagctcagttggcaaggacaatgcattattatatgcaggggtcggggttcgaaccccggacaccccacttat 8690291  T

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Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 275 - 338
Target Start/End: Original strand, 10147261 - 10147324
Alignment:
Q  275 cgtgaacatagttcagttgacaaggataatgcattgttatatgtaggagtcggtgtttgaactc 338  Q
    |||||||||| | |||||| || ||| |||||||||||||||||||| ||||| || |||||||    
T  10147261 cgtgaacataatacagttggcagggacaatgcattgttatatgtaggggtcggggtctgaactc 10147324  T

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Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 275 - 354
Target Start/End: Complemental strand, 23661454 - 23661376
Alignment:
Q  275 cgtgaacatagttcagttgacaaggataatgcattgttatatgtaggagtcggtgtttgaactctaaacaccccacttat 354  Q
    ||||||||||| ||||||| | |||| |||||||||||||||||||| || || ||| |||| |  ||||||||||||||    
T  23661454 cgtgaacatagctcagttg-ctaggacaatgcattgttatatgtaggggtaggggttcgaaccccgaacaccccacttat 23661376  T

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Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 302 - 345
Target Start/End: Original strand, 49573155 - 49573198
Alignment:
Q  302 aatgcattgttatatgtaggagtcggtgtttgaactctaaacac 345  Q
    ||||||||||||||||||| ||||||||||||||| | ||||||    
T  49573155 aatgcattgttatatgtagcagtcggtgtttgaaccccaaacac 49573198  T

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Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 276 - 354
Target Start/End: Complemental strand, 56531332 - 56531254
Alignment:
Q  276 gtgaacatagttcagttgacaaggataatgcattgttatatgtaggagtcggtgtttgaactctaaacaccccacttat 354  Q
    |||| ||||| ||||||| |||||| |||||||||||||||| ||| | ||| ||| ||||||   |||||||||||||    
T  56531332 gtgagcatagctcagttggcaaggacaatgcattgttatatgcaggggccggggttcgaactccggacaccccacttat 56531254  T

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Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 354
Target Start/End: Complemental strand, 12820508 - 12820423
Alignment:
Q  269 cgtcctcgtgaacatagttcagttgacaaggataatgcattgttatatgtaggagtcggtgtttgaactctaaacaccccacttat 354  Q
    ||||| ||||| ||||| ||||||| ||  || |||||||||||||||| ||| ||||| ||| |||| ||  |||||||||||||    
T  12820508 cgtccccgtgagcatagctcagttggcagagacaatgcattgttatatgcaggggtcggggttagaaccctggacaccccacttat 12820423  T

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Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 354
Target Start/End: Original strand, 36008267 - 36008352
Alignment:
Q  269 cgtcctcgtgaacatagttcagttgacaaggataatgcattgttatatgtaggagtcggtgtttgaactctaaacaccccacttat 354  Q
    ||||| ||||| ||||| ||||||| || ||| |||||||||||||||| ||| | ||| ||| |||| |  ||||||||||||||    
T  36008267 cgtccccgtgagcatagctcagttggcagggacaatgcattgttatatgcaggggccggggttcgaaccccgaacaccccacttat 36008352  T

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Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 302 - 338
Target Start/End: Original strand, 23518275 - 23518311
Alignment:
Q  302 aatgcattgttatatgtaggagtcggtgtttgaactc 338  Q
    |||||||| ||||||||||||||||| ||||||||||    
T  23518275 aatgcattattatatgtaggagtcggagtttgaactc 23518311  T

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Target: chr5 (Bit Score: 37; Significance: 0.00000000001; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 354
Target Start/End: Complemental strand, 14077357 - 14077274
Alignment:
Q  270 gtcctcgtgaacatagttcagttgacaaggataatgcattgttatatgtaggagtcggtgtttgaactctaaacaccccacttat 354  Q
    |||||||||| ||||| |||||||||| ||||| |||||||||||||||| ||||| | ||| ||||  | ||||||||||||||    
T  14077357 gtcctcgtgagcatagatcagttgacagggata-tgcattgttatatgtaagagtcagggttcgaaccatgaacaccccacttat 14077274  T

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Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 281 - 354
Target Start/End: Complemental strand, 3102218 - 3102145
Alignment:
Q  281 catagttcagttgacaaggataatgcattgttatatgtaggagtcggtgtttgaactctaaacaccccacttat 354  Q
    ||||| ||||||| || ||| |||||||||||||||||||||||||| ||| |||| |  ||||||||| ||||    
T  3102218 catagctcagttggcagggacaatgcattgttatatgtaggagtcggggttcgaaccccgaacaccccatttat 3102145  T

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Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 269 - 354
Target Start/End: Complemental strand, 4674918 - 4674833
Alignment:
Q  269 cgtcctcgtgaacatagttcagttgacaaggataatgcattgttatatgtaggagtcggtgtttgaactctaaacaccccacttat 354  Q
    ||||||||||| ||||| |||||||||| ||| |||||||| ||||||| ||| ||||| ||| |||| |   |||||||||||||    
T  4674918 cgtcctcgtgagcatagctcagttgacagggacaatgcattattatatgcaggggtcggggttcgaaccccggacaccccacttat 4674833  T

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Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 281 - 319
Target Start/End: Original strand, 9934497 - 9934535
Alignment:
Q  281 catagttcagttgacaaggataatgcattgttatatgta 319  Q
    |||||||||||||||| ||| ||||||||||||||||||    
T  9934497 catagttcagttgacatggaaaatgcattgttatatgta 9934535  T

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Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 336
Target Start/End: Original strand, 13862119 - 13862184
Alignment:
Q  270 gtcctcgtgaacatagttcagttgacaaggataatgcattgttatatgtaggagtcggtgtttgaac 336  Q
    |||| ||||| |||||||||||||||| |||| ||||||||||||||| ||| ||||| ||| ||||    
T  13862119 gtccccgtgagcatagttcagttgacatggat-atgcattgttatatgcaggggtcggagttcgaac 13862184  T

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Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 316
Target Start/End: Original strand, 21360391 - 21360437
Alignment:
Q  270 gtcctcgtgaacatagttcagttgacaaggataatgcattgttatat 316  Q
    |||| |||||||||||||||||||||| ||||| || ||||||||||    
T  21360391 gtccccgtgaacatagttcagttgacagggatattgtattgttatat 21360437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 336
Target Start/End: Complemental strand, 32253020 - 32252955
Alignment:
Q  270 gtcctcgtgaacatagttcagttgacaaggataatgcattgttatatgtaggagtcggtgtttgaac 336  Q
    |||||||||||||||| |||||||| |||||  ||||||| ||||||||||| ||||| ||| ||||    
T  32253020 gtcctcgtgaacatagctcagttgataagga-catgcattattatatgtaggggtcggggttcgaac 32252955  T

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Target: chr1 (Bit Score: 37; Significance: 0.00000000001; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 354
Target Start/End: Original strand, 9527419 - 9527503
Alignment:
Q  270 gtcctcgtgaacatagttcagttgacaaggataatgcattgttatatgtaggagtcggtgtttgaactctaaacaccccacttat 354  Q
    |||| ||||| ||||| ||||||| || ||| |||||||||||||||| ||| ||||| |||||||| ||  |||||||||||||    
T  9527419 gtccccgtgagcatagctcagttggcagggacaatgcattgttatatgcaggggtcggggtttgaaccctggacaccccacttat 9527503  T

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Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 268 - 323
Target Start/End: Original strand, 24119298 - 24119352
Alignment:
Q  268 acgtcctcgtgaacatagttcagttgacaaggataatgcattgttatatgtaggag 323  Q
    |||||| ||||||||||||||||||||||||||  ||||||||||||||| |||||    
T  24119298 acgtccccgtgaacatagttcagttgacaagga-catgcattgttatatgcaggag 24119352  T

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Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 275 - 321
Target Start/End: Original strand, 52363013 - 52363059
Alignment:
Q  275 cgtgaacatagttcagttgacaaggataatgcattgttatatgtagg 321  Q
    ||||||||||||||||||||||   ||||||||||||||||||||||    
T  52363013 cgtgaacatagttcagttgacagaaataatgcattgttatatgtagg 52363059  T

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Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 277 - 319
Target Start/End: Original strand, 22102607 - 22102649
Alignment:
Q  277 tgaacatagttcagttgacaaggataatgcattgttatatgta 319  Q
    ||||||||||||||||| | |||||||| ||||||||||||||    
T  22102607 tgaacatagttcagttggctaggataatacattgttatatgta 22102649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 322
Target Start/End: Complemental strand, 25270262 - 25270211
Alignment:
Q  270 gtcctcgtgaacatagttcagttgacaaggataatgcattgttatatgtagga 322  Q
    |||||||||| |||| ||| ||||||||||| | |||||||||||||||||||    
T  25270262 gtcctcgtgagcataattcggttgacaaggaca-tgcattgttatatgtagga 25270211  T

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Target: chr2 (Bit Score: 36; Significance: 0.00000000004; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 275 - 354
Target Start/End: Original strand, 44187702 - 44187781
Alignment:
Q  275 cgtgaacatagttcagttgacaaggataatgcattgttatatgtaggagtcggtgtttgaactctaaacaccccacttat 354  Q
    ||||| ||||||||||||| || |||||||||||| ||||||| ||| ||||| ||| |||| | | |||||||||||||    
T  44187702 cgtgagcatagttcagttggcagggataatgcattattatatgcaggggtcggggttcgaaccccagacaccccacttat 44187781  T

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Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 320
Target Start/End: Original strand, 34946036 - 34946086
Alignment:
Q  270 gtcctcgtgaacatagttcagttgacaaggataatgcattgttatatgtag 320  Q
    ||||||||||||||||||||||| ||| | | |||||||||||||||||||    
T  34946036 gtcctcgtgaacatagttcagttaacatgaacaatgcattgttatatgtag 34946086  T

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Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 317
Target Start/End: Complemental strand, 41196045 - 41195997
Alignment:
Q  269 cgtcctcgtgaacatagttcagttgacaaggataatgcattgttatatg 317  Q
    ||||| ||||| ||||| |||||||||| ||||||||||||||||||||    
T  41196045 cgtccccgtgagcatagctcagttgacagggataatgcattgttatatg 41195997  T

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Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 297 - 336
Target Start/End: Complemental strand, 41711711 - 41711672
Alignment:
Q  297 aggataatgcattgttatatgtaggagtcggtgtttgaac 336  Q
    |||| |||||||| ||||||||||||||||||||||||||    
T  41711711 aggacaatgcattattatatgtaggagtcggtgtttgaac 41711672  T

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Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 274 - 354
Target Start/End: Complemental strand, 9791992 - 9791913
Alignment:
Q  274 tcgtgaacatagttcagttgacaaggataatgcattgttatatgtaggagtcggtgtttgaactctaaacaccccacttat 354  Q
    |||||| |||||||||||||  | ||| |||||||| ||||||||||| ||||| ||| ||| |||  |||||||||||||    
T  9791992 tcgtgagcatagttcagttggta-ggacaatgcattattatatgtaggtgtcggggttcgaattctggacaccccacttat 9791913  T

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Target: scaffold0002 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 354
Target Start/End: Complemental strand, 451479 - 451393
Alignment:
Q  268 acgtcctcgtgaacatagttcagttgacaaggataatgcattgttatatgtaggagtcggtgtttgaactctaaacaccccacttat 354  Q
    |||||| ||||| ||||| ||||||  |||||| |||||||||||||||||||| | ||| ||| ||||||   |||||||||||||    
T  451479 acgtccccgtgagcatagctcagttagcaaggacaatgcattgttatatgtaggggccggggttcgaactccggacaccccacttat 451393  T

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Target: chr8 (Bit Score: 32; Significance: 0.000000009; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 57 - 140
Target Start/End: Original strand, 43665942 - 43666025
Alignment:
Q  57 tacaggttttaaagcatgcaaagttggaaaagactgtttgggagcacatggtgttttgagagttagcatgggttgctttgtatc 140  Q
    |||||| || |||| |||||| | |||||||||||||||||| ||  | ||||||||| | || ||| ||||||||||||||||    
T  43665942 tacaggattaaaaggatgcaatggtggaaaagactgtttgggtgctgaaggtgttttgcgtgtgagcttgggttgctttgtatc 43666025  T

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Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 354
Target Start/End: Complemental strand, 13537414 - 13537329
Alignment:
Q  269 cgtcctcgtgaacatagttcagttgacaaggataatgcattgttatatgtaggagtcggtgtttgaactctaaacaccccacttat 354  Q
    |||| |||||| ||||  |||||||||| | | |||||||||||||||| ||| ||||| ||| |||| | | |||||||||||||    
T  13537414 cgtcttcgtgagcataactcagttgacatgaacaatgcattgttatatgcaggtgtcggggttcgaaccccagacaccccacttat 13537329  T

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Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 354
Target Start/End: Complemental strand, 13626962 - 13626877
Alignment:
Q  269 cgtcctcgtgaacatagttcagttgacaaggataatgcattgttatatgtaggagtcggtgtttgaactctaaacaccccacttat 354  Q
    |||| |||||| ||||  |||||||||| | | |||||||||||||||| ||| ||||| ||| |||| | | |||||||||||||    
T  13626962 cgtcttcgtgagcataactcagttgacatgaacaatgcattgttatatgcaggtgtcggggttcgaaccccagacaccccacttat 13626877  T

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Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 354
Target Start/End: Complemental strand, 43468780 - 43468723
Alignment:
Q  297 aggataatgcattgttatatgtaggagtcggtgtttgaactctaaacaccccacttat 354  Q
    |||| |||||||||||||||||||| ||||| ||| ||||||   |||||||||||||    
T  43468780 aggacaatgcattgttatatgtaggggtcggggttcgaactccggacaccccacttat 43468723  T

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Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 354
Target Start/End: Original strand, 14012605 - 14012689
Alignment:
Q  270 gtcctcgtgaacatagttcagttgacaaggataatgcattgttatatgtaggagtcggtgtttgaactctaaacaccccacttat 354  Q
    |||| ||||| ||||||||||||| || ||| |||||||||||||||| ||| | ||| ||| ||| ||   |||||||||||||    
T  14012605 gtccccgtgagcatagttcagttggcagggacaatgcattgttatatgcaggggccggggttcgaagtccggacaccccacttat 14012689  T

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Target: chr3 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 282 - 354
Target Start/End: Original strand, 43774190 - 43774262
Alignment:
Q  282 atagttcagttgacaaggataatgcattgttatatgtaggagtcggtgtttgaactctaaacaccccacttat 354  Q
    |||| ||||||| || ||| |||||||||||||||| ||| ||||| ||| |||| | | |||||||||||||    
T  43774190 atagctcagttggcagggacaatgcattgttatatgcaggggtcggggttcgaaccccagacaccccacttat 43774262  T

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