View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2218_high_32 (Length: 253)
Name: NF2218_high_32
Description: NF2218
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2218_high_32 |
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Alignment Details
Target: chr8 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 18 - 240
Target Start/End: Original strand, 8721716 - 8721917
Alignment:
| Q |
18 |
actttgagattgtggatattgtccaaagaaactataaatagggattgaagtaatatttcaaaagtaggcaggtagtagtagtaagatacagtttccatat |
117 |
Q |
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| T |
8721716 |
actttgagattgtggatattgtccaaagaaactataaata---------------tttcaaaagtaggcaggtagtggta---agagacaatttccatat |
8721797 |
T |
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| Q |
118 |
tttgtttttgttttagtatatttctttgacttccgagctaagccaaaaatagactgtgatcaccttccatactactcttactcactacttttcaccatta |
217 |
Q |
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||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8721798 |
tttgtttttgtttta---tatttgtttgacttccgagctaagccaaaaatagactgtgatcaccttccatactactcttactcactacttttcaccatta |
8721894 |
T |
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| Q |
218 |
caaattgcagaaccattttctct |
240 |
Q |
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||||||||||||||| ||||||| |
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| T |
8721895 |
caaattgcagaaccactttctct |
8721917 |
T |
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