View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2218_low_14 (Length: 441)
Name: NF2218_low_14
Description: NF2218
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2218_low_14 |
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Alignment Details
Target: chr7 (Bit Score: 343; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 343; E-Value: 0
Query Start/End: Original strand, 13 - 425
Target Start/End: Original strand, 24134796 - 24135204
Alignment:
| Q |
13 |
attctgcatcataagaaatcatcgaaaggttcaatatggttgattgtagcatagatacataattcgcatgggtggcctgagaaccgtgaaccgattcgcg |
112 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| |
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| T |
24134796 |
attctgcatcataagaaatcatcgaaaggttcaatatggttgattgtagcatagatacataattcgcatgggtggcctgagaaccgcgaaccggttcgcg |
24134895 |
T |
|
| Q |
113 |
gtactgttaagaaatagttcgtcaaaaattcgcaaggaattctggagaaaccacgtaccaagcaaaccatgttggagatagtagaaaaatatttgaattt |
212 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||| ||||||| |
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| T |
24134896 |
-tactgttatgaaatagttcgtcaaaaattcgcaaggaattctcgagaaaccacgtaccaagcgaaccatgttagagatagtagaaaaatatctgaattt |
24134994 |
T |
|
| Q |
213 |
ttgaactaattactaataagccttgggaagtgattcctcctctctttggagaagtggaaaactactcgtcccaccaagaagaggtgaaaaatcactggcc |
312 |
Q |
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||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
24134995 |
ttgaactaattactattaagccttgggaagtgattcct---ctctttggagaagtggaaaactactcgtcccaccaaggagaggtgaaaaatcactggcc |
24135091 |
T |
|
| Q |
313 |
ccaccaataaagtcatgggatgctctattatgagacgaacactgatgaaaagaaaatcgattcaataattttcaaacaaattgtcggatcggtaaggtat |
412 |
Q |
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|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| |
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| T |
24135092 |
ccaccaataaagtcatgggatgctctattatgagacgaacgctgatgaaaagaaaatcgattcaataattttcaaacaaattgtcggatcagcaaggtat |
24135191 |
T |
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| Q |
413 |
ctatgcaataaca |
425 |
Q |
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||||||||||||| |
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| T |
24135192 |
ctatgcaataaca |
24135204 |
T |
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