View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2218_low_27 (Length: 321)

Name: NF2218_low_27
Description: NF2218
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2218_low_27
NF2218_low_27
[»] chr3 (23 HSPs)
chr3 (1-132)||(43555111-43555240)
chr3 (268-309)||(26481966-26482007)
chr3 (251-311)||(4222162-4222223)
chr3 (251-311)||(46518649-46518710)
chr3 (251-310)||(36720402-36720462)
chr3 (271-310)||(8075122-8075161)
chr3 (271-310)||(37788460-37788499)
chr3 (271-309)||(14186689-14186727)
chr3 (271-309)||(30715784-30715822)
chr3 (251-309)||(51766917-51766975)
chr3 (251-307)||(14339631-14339688)
chr3 (268-309)||(20501735-20501776)
chr3 (251-311)||(27093355-27093416)
chr3 (271-308)||(30311348-30311385)
chr3 (271-307)||(9345258-9345294)
chr3 (271-311)||(10445133-10445173)
chr3 (271-311)||(16354886-16354926)
chr3 (268-308)||(19154670-19154710)
chr3 (271-311)||(27259203-27259243)
chr3 (271-311)||(28703398-28703438)
chr3 (271-311)||(31788964-31789004)
chr3 (271-311)||(39253739-39253779)
chr3 (271-311)||(53412987-53413027)
[»] chr8 (11 HSPs)
chr8 (269-310)||(31408117-31408158)
chr8 (271-309)||(22193360-22193398)
chr8 (255-311)||(13129693-13129750)
chr8 (272-311)||(12988471-12988510)
chr8 (268-307)||(19703485-19703524)
chr8 (272-311)||(33017257-33017296)
chr8 (270-309)||(40872917-40872956)
chr8 (251-308)||(12150725-12150782)
chr8 (271-307)||(3524399-3524435)
chr8 (271-311)||(6536562-6536602)
chr8 (271-311)||(23361643-23361683)
[»] chr5 (13 HSPs)
chr5 (251-311)||(43442217-43442278)
chr5 (271-311)||(34984848-34984888)
chr5 (271-311)||(37258360-37258400)
chr5 (251-311)||(25627078-25627139)
chr5 (271-311)||(14285203-14285243)
chr5 (267-310)||(18437123-18437166)
chr5 (271-309)||(39327086-39327124)
chr5 (278-311)||(7918463-7918496)
chr5 (274-311)||(18595995-18596032)
chr5 (265-310)||(25979206-25979251)
chr5 (271-311)||(16773849-16773889)
chr5 (263-311)||(27596361-27596409)
chr5 (271-311)||(29173532-29173572)
[»] chr2 (10 HSPs)
chr2 (251-311)||(16918572-16918633)
chr2 (268-311)||(19244148-19244191)
chr2 (268-307)||(37480114-37480153)
chr2 (272-309)||(4262298-4262335)
chr2 (251-307)||(29503292-29503349)
chr2 (271-308)||(42327392-42327429)
chr2 (271-311)||(13803537-13803577)
chr2 (271-311)||(21303988-21304028)
chr2 (263-311)||(34041582-34041630)
chr2 (279-311)||(40755644-40755676)
[»] chr1 (23 HSPs)
chr1 (251-311)||(8177176-8177237)
chr1 (264-311)||(19088244-19088291)
chr1 (251-311)||(33700767-33700828)
chr1 (251-311)||(51703800-51703861)
chr1 (268-309)||(51814533-51814574)
chr1 (271-311)||(2799904-2799944)
chr1 (271-311)||(3265966-3266006)
chr1 (263-311)||(22049822-22049870)
chr1 (271-311)||(36371512-36371552)
chr1 (264-311)||(1600286-1600333)
chr1 (272-307)||(24019066-24019101)
chr1 (268-311)||(50919993-50920036)
chr1 (272-310)||(11063599-11063637)
chr1 (264-310)||(44961800-44961846)
chr1 (271-308)||(15786317-15786354)
chr1 (271-311)||(1247155-1247195)
chr1 (271-311)||(4566590-4566630)
chr1 (271-311)||(8904456-8904496)
chr1 (271-307)||(16169976-16170012)
chr1 (271-307)||(19528325-19528361)
chr1 (275-311)||(21547474-21547510)
chr1 (271-311)||(23566333-23566373)
chr1 (272-308)||(45010732-45010768)
[»] chr4 (20 HSPs)
chr4 (271-311)||(37274453-37274493)
chr4 (251-309)||(49576890-49576949)
chr4 (271-311)||(7949448-7949488)
chr4 (251-310)||(12798705-12798765)
chr4 (271-311)||(19680782-19680822)
chr4 (272-308)||(34661708-34661744)
chr4 (271-311)||(37109345-37109385)
chr4 (268-311)||(11592147-11592190)
chr4 (271-310)||(23377998-23378037)
chr4 (264-311)||(51969052-51969099)
chr4 (271-309)||(38838839-38838877)
chr4 (273-307)||(44865378-44865412)
chr4 (263-300)||(14451751-14451788)
chr4 (251-311)||(38869789-38869850)
chr4 (271-311)||(4249219-4249259)
chr4 (271-311)||(7093411-7093450)
chr4 (271-307)||(8325377-8325413)
chr4 (271-311)||(28635738-28635778)
chr4 (271-307)||(46295139-46295175)
chr4 (271-311)||(51622527-51622567)
[»] scaffold0291 (1 HSPs)
scaffold0291 (251-307)||(2468-2525)
[»] chr7 (21 HSPs)
chr7 (270-307)||(38374597-38374634)
chr7 (267-311)||(11700203-11700247)
chr7 (251-307)||(19553475-19553531)
chr7 (271-311)||(25655222-25655262)
chr7 (271-311)||(26459404-26459444)
chr7 (271-310)||(43215226-43215265)
chr7 (264-310)||(18363731-18363777)
chr7 (251-311)||(2962480-2962541)
chr7 (268-309)||(14058292-14058333)
chr7 (268-309)||(14368320-14368361)
chr7 (272-309)||(17041008-17041045)
chr7 (274-311)||(21558173-21558210)
chr7 (270-307)||(29916806-29916843)
chr7 (251-307)||(37085547-37085604)
chr7 (251-311)||(38851277-38851338)
chr7 (271-311)||(2882992-2883032)
chr7 (271-311)||(13106776-13106816)
chr7 (271-311)||(15137595-15137635)
chr7 (271-307)||(22760905-22760941)
chr7 (271-311)||(27313728-27313768)
chr7 (271-311)||(41519258-41519298)
[»] scaffold0238 (2 HSPs)
scaffold0238 (271-311)||(5235-5275)
scaffold0238 (271-311)||(2705-2745)
[»] scaffold0300 (1 HSPs)
scaffold0300 (263-310)||(4374-4421)
[»] scaffold0194 (1 HSPs)
scaffold0194 (251-309)||(13042-13101)
[»] chr6 (7 HSPs)
chr6 (271-310)||(12188298-12188337)
chr6 (268-311)||(17328258-17328301)
chr6 (251-311)||(28363958-28364019)
chr6 (251-295)||(34293826-34293871)
chr6 (271-311)||(1056679-1056719)
chr6 (268-308)||(16535223-16535263)
chr6 (271-307)||(24641188-24641224)
[»] scaffold0008 (1 HSPs)
scaffold0008 (263-309)||(49340-49386)
[»] scaffold0299 (1 HSPs)
scaffold0299 (251-311)||(11549-11610)
[»] scaffold0006 (1 HSPs)
scaffold0006 (274-311)||(18344-18381)
[»] scaffold0180 (1 HSPs)
scaffold0180 (271-311)||(19956-19996)


Alignment Details
Target: chr3 (Bit Score: 72; Significance: 1e-32; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 43555240 - 43555111
Alignment:
Q  1 tgactacacccattagcatcaaaagggacaaaagaaccaaaaccctaaaccacggtaggtgaacatcttgatgcttgtgttggtaataatatcttcttcg 100  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||||| | ||||||||||| ||||||||| |||| ||||||||||||| || ||     
T  43555240 tgactacacgcattagcatcaaaagggacaaaggaaccaaaaccctaaacaagggtaggtgaacgtcttgatgcctgtgctggtaataatatc-tcctca 43555142  T
Q  101 gtgctagatttttctagctagctttattaatt 132  Q
    || ||||| |||||||||||||||| ||||||    
T  43555141 gtactaga-ttttctagctagctttgttaatt 43555111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 268 - 309
Target Start/End: Original strand, 26481966 - 26482007
Alignment:
Q  268 tgagagtgtgctcctcctcaaggttttaggttcgattctctc 309  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  26481966 tgagagtgtgctcctcctcaaagttttaggttcgattctctc 26482007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 251 - 311
Target Start/End: Original strand, 4222162 - 4222223
Alignment:
Q  251 tggtattggtttgg-atttgagagtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    ||||||||| |||| || || |||||||||||||||||| || |||||||||||||||||||    
T  4222162 tggtattggcttgggatctgggagtgtgctcctcctcaaagtcttaggttcgattctctctg 4222223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 251 - 311
Target Start/End: Original strand, 46518649 - 46518710
Alignment:
Q  251 tggtattggtttgg-atttgagagtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    ||||||||| |||| || || ||||||||||||||||||||||| ||||| |||||||||||    
T  46518649 tggtattggcttgggatctgggagtgtgctcctcctcaaggtttcaggtttgattctctctg 46518710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 310
Target Start/End: Original strand, 36720402 - 36720462
Alignment:
Q  251 tggtattggtttgg-atttgagagtgtgctcctcctcaaggttttaggttcgattctctct 310  Q
    ||||||||| |||| || || |||||||||||||||| |||||| ||||||||||||||||    
T  36720402 tggtattggcttgggatatgggagtgtgctcctcctcgaggtttcaggttcgattctctct 36720462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 271 - 310
Target Start/End: Complemental strand, 8075161 - 8075122
Alignment:
Q  271 gagtgtgctcctcctcaaggttttaggttcgattctctct 310  Q
    ||||||||||||||||||||||| ||||||||||| ||||    
T  8075161 gagtgtgctcctcctcaaggtttcaggttcgattccctct 8075122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 271 - 310
Target Start/End: Complemental strand, 37788499 - 37788460
Alignment:
Q  271 gagtgtgctcctcctcaaggttttaggttcgattctctct 310  Q
    ||||||||||||||||||||| | ||||||||||||||||    
T  37788499 gagtgtgctcctcctcaaggtctcaggttcgattctctct 37788460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 309
Target Start/End: Original strand, 14186689 - 14186727
Alignment:
Q  271 gagtgtgctcctcctcaaggttttaggttcgattctctc 309  Q
    ||||||||||||||||||||| | |||||||||||||||    
T  14186689 gagtgtgctcctcctcaaggtctcaggttcgattctctc 14186727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 309
Target Start/End: Original strand, 30715784 - 30715822
Alignment:
Q  271 gagtgtgctcctcctcaaggttttaggttcgattctctc 309  Q
    |||||||||||||||||| |||| |||||||||||||||    
T  30715784 gagtgtgctcctcctcaatgtttcaggttcgattctctc 30715822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 309
Target Start/End: Original strand, 51766917 - 51766975
Alignment:
Q  251 tggtattggtttggatttgagagtgtgctcctcctcaaggttttaggttcgattctctc 309  Q
    ||||||||  |||||| || |||||||||| |||||||||||| || ||||||||||||    
T  51766917 tggtattgacttggatctgggagtgtgctcttcctcaaggtttcagattcgattctctc 51766975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 307
Target Start/End: Original strand, 14339631 - 14339688
Alignment:
Q  251 tggtattggtttgg-atttgagagtgtgctcctcctcaaggttttaggttcgattctc 307  Q
    ||||||||| |||| ||||| |||||||||||||||||| || | |||||||||||||    
T  14339631 tggtattggcttgggatttgggagtgtgctcctcctcaatgtctcaggttcgattctc 14339688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 309
Target Start/End: Original strand, 20501735 - 20501776
Alignment:
Q  268 tgagagtgtgctcctcctcaaggttttaggttcgattctctc 309  Q
    |||||||||||||||||| ||||| | |||||||||||||||    
T  20501735 tgagagtgtgctcctccttaaggtctcaggttcgattctctc 20501776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 311
Target Start/End: Complemental strand, 27093416 - 27093355
Alignment:
Q  251 tggtattggtttggat-ttgagagtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    ||||||||| |||||  ||| ||||||||||||||||||||| | ||||| |||||||||||    
T  27093416 tggtattggcttggaacttgggagtgtgctcctcctcaaggtctcaggtttgattctctctg 27093355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 308
Target Start/End: Original strand, 30311348 - 30311385
Alignment:
Q  271 gagtgtgctcctcctcaaggttttaggttcgattctct 308  Q
    ||||||||||||||||||||| | ||||||||||||||    
T  30311348 gagtgtgctcctcctcaaggtctcaggttcgattctct 30311385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 271 - 307
Target Start/End: Complemental strand, 9345294 - 9345258
Alignment:
Q  271 gagtgtgctcctcctcaaggttttaggttcgattctc 307  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  9345294 gagtgtgctcctcctaaaggtcttaggttcgattctc 9345258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 271 - 311
Target Start/End: Complemental strand, 10445173 - 10445133
Alignment:
Q  271 gagtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    |||||||||||||||| |||| | |||||||||||||||||    
T  10445173 gagtgtgctcctcctcgaggtctcaggttcgattctctctg 10445133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 271 - 311
Target Start/End: Complemental strand, 16354926 - 16354886
Alignment:
Q  271 gagtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    ||||||||||||||||| ||| | |||||||||||||||||    
T  16354926 gagtgtgctcctcctcagggtctcaggttcgattctctctg 16354886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 268 - 308
Target Start/End: Original strand, 19154670 - 19154710
Alignment:
Q  268 tgagagtgtgctcctcctcaaggttttaggttcgattctct 308  Q
    |||||||||||||||||| ||||| | ||||||||||||||    
T  19154670 tgagagtgtgctcctcctaaaggtctcaggttcgattctct 19154710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 271 - 311
Target Start/End: Original strand, 27259203 - 27259243
Alignment:
Q  271 gagtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    |||||||||||||||| |||||| ||||| |||||||||||    
T  27259203 gagtgtgctcctcctcgaggtttcaggtttgattctctctg 27259243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 271 - 311
Target Start/End: Complemental strand, 28703438 - 28703398
Alignment:
Q  271 gagtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    ||||||||||||| ||||||| | |||||||||||||||||    
T  28703438 gagtgtgctcctcttcaaggtctcaggttcgattctctctg 28703398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 271 - 311
Target Start/End: Complemental strand, 31789004 - 31788964
Alignment:
Q  271 gagtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    |||||||||||||||| |||||||||||| |||| ||||||    
T  31789004 gagtgtgctcctcctcgaggttttaggtttgattatctctg 31788964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 271 - 311
Target Start/End: Original strand, 39253739 - 39253779
Alignment:
Q  271 gagtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    ||||||||||||| ||||||| | |||||||||||||||||    
T  39253739 gagtgtgctcctcttcaaggtctcaggttcgattctctctg 39253779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 271 - 311
Target Start/End: Original strand, 53412987 - 53413027
Alignment:
Q  271 gagtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    ||||||||||||||||||||| | |||||| ||||||||||    
T  53412987 gagtgtgctcctcctcaaggtctcaggttcaattctctctg 53413027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000002; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 310
Target Start/End: Complemental strand, 31408158 - 31408117
Alignment:
Q  269 gagagtgtgctcctcctcaaggttttaggttcgattctctct 310  Q
    ||||||||||||||||||||||||| ||||||||||||||||    
T  31408158 gagagtgtgctcctcctcaaggtttcaggttcgattctctct 31408117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 271 - 309
Target Start/End: Complemental strand, 22193398 - 22193360
Alignment:
Q  271 gagtgtgctcctcctcaaggttttaggttcgattctctc 309  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  22193398 gagtgtgctcctcctcaaggtcttaggttcgattctctc 22193360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 311
Target Start/End: Original strand, 13129693 - 13129750
Alignment:
Q  255 attggtttgg-atttgagagtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    |||||||||| | ||| ||||| ||||||||||||||||| |||||||||||||||||    
T  13129693 attggtttgggacttgggagtgcgctcctcctcaaggtttcaggttcgattctctctg 13129750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 272 - 311
Target Start/End: Original strand, 12988471 - 12988510
Alignment:
Q  272 agtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    |||||||||||||||||||||| ||||||||| |||||||    
T  12988471 agtgtgctcctcctcaaggtttcaggttcgatcctctctg 12988510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 268 - 307
Target Start/End: Complemental strand, 19703524 - 19703485
Alignment:
Q  268 tgagagtgtgctcctcctcaaggttttaggttcgattctc 307  Q
    |||||||||||||||||||||||| | |||||||||||||    
T  19703524 tgagagtgtgctcctcctcaaggtctcaggttcgattctc 19703485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 272 - 311
Target Start/End: Original strand, 33017257 - 33017296
Alignment:
Q  272 agtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    |||||||||||||||||||| | |||||||||||||||||    
T  33017257 agtgtgctcctcctcaaggtctcaggttcgattctctctg 33017296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 270 - 309
Target Start/End: Original strand, 40872917 - 40872956
Alignment:
Q  270 agagtgtgctcctcctcaaggttttaggttcgattctctc 309  Q
    |||||||||||||| |||||||||||||||| ||||||||    
T  40872917 agagtgtgctcctcttcaaggttttaggttccattctctc 40872956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 308
Target Start/End: Complemental strand, 12150782 - 12150725
Alignment:
Q  251 tggtattggtttggatttgagagtgtgctcctcctcaaggttttaggttcgattctct 308  Q
    |||||||||||| ||| | |||||||||| ||| ||||| | ||||||||||||||||    
T  12150782 tggtattggtttagatctaagagtgtgcttctcatcaagatcttaggttcgattctct 12150725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 271 - 307
Target Start/End: Complemental strand, 3524435 - 3524399
Alignment:
Q  271 gagtgtgctcctcctcaaggttttaggttcgattctc 307  Q
    ||||||||||||||||||||| |||||||| ||||||    
T  3524435 gagtgtgctcctcctcaaggtcttaggttcaattctc 3524399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 271 - 311
Target Start/End: Original strand, 6536562 - 6536602
Alignment:
Q  271 gagtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    ||||||||||||||||||||| | |||||| ||||||||||    
T  6536562 gagtgtgctcctcctcaaggtctcaggttcaattctctctg 6536602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 271 - 311
Target Start/End: Complemental strand, 23361683 - 23361643
Alignment:
Q  271 gagtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    ||||||||||||||||||||| | |||||| ||||||||||    
T  23361683 gagtgtgctcctcctcaaggtctcaggttcaattctctctg 23361643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000002; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 251 - 311
Target Start/End: Original strand, 43442217 - 43442278
Alignment:
Q  251 tggtattggtttg-gatttgagagtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    ||||||||||||| ||| || ||||||||||||||||||||| | |||||||||||||||||    
T  43442217 tggtattggtttgagatctgggagtgtgctcctcctcaaggtctcaggttcgattctctctg 43442278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 271 - 311
Target Start/End: Original strand, 34984848 - 34984888
Alignment:
Q  271 gagtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  34984848 gagtgtgctcctcctcaaggtcttaggttcgattctctctg 34984888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 271 - 311
Target Start/End: Complemental strand, 37258400 - 37258360
Alignment:
Q  271 gagtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  37258400 gagtgtgctcctcctcaaggtttcaggttcgattctctctg 37258360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 251 - 311
Target Start/End: Original strand, 25627078 - 25627139
Alignment:
Q  251 tggtattggtttggat-ttgagagtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    ||||||||| |||||  ||| ||||||||||||||||||||| | |||||||||||||||||    
T  25627078 tggtattggcttggaacttgggagtgtgctcctcctcaaggtctcaggttcgattctctctg 25627139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 311
Target Start/End: Original strand, 14285203 - 14285243
Alignment:
Q  271 gagtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    ||||||||||||||||||||| | |||||||||||||||||    
T  14285203 gagtgtgctcctcctcaaggtctcaggttcgattctctctg 14285243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 310
Target Start/End: Original strand, 18437123 - 18437166
Alignment:
Q  267 ttgagagtgtgctcctcctcaaggttttaggttcgattctctct 310  Q
    |||||||||||||||||||||| ||||  |||||||||||||||    
T  18437123 ttgagagtgtgctcctcctcaaagtttcgggttcgattctctct 18437166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 309
Target Start/End: Complemental strand, 39327124 - 39327086
Alignment:
Q  271 gagtgtgctcctcctcaaggttttaggttcgattctctc 309  Q
    ||||||||||||||||||||| |||| ||||||||||||    
T  39327124 gagtgtgctcctcctcaaggtcttagcttcgattctctc 39327086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 311
Target Start/End: Complemental strand, 7918496 - 7918463
Alignment:
Q  278 ctcctcctcaaggttttaggttcgattctctctg 311  Q
    |||||||||||||| |||||||||||||||||||    
T  7918496 ctcctcctcaaggtcttaggttcgattctctctg 7918463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 311
Target Start/End: Complemental strand, 18596032 - 18595995
Alignment:
Q  274 tgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    |||||||||||||||||| |||||||||||| ||||||    
T  18596032 tgtgctcctcctcaaggtcttaggttcgattttctctg 18595995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 310
Target Start/End: Original strand, 25979206 - 25979251
Alignment:
Q  265 atttgagagtgtgctcctcctcaaggttttaggttcgattctctct 310  Q
    ||||| |||||| |||||||||||||| | ||||||||||||||||    
T  25979206 atttgggagtgttctcctcctcaaggtctcaggttcgattctctct 25979251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 271 - 311
Target Start/End: Original strand, 16773849 - 16773889
Alignment:
Q  271 gagtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    |||||||||||||||| |||| | |||||||||||||||||    
T  16773849 gagtgtgctcctcctcgaggtctcaggttcgattctctctg 16773889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 263 - 311
Target Start/End: Original strand, 27596361 - 27596409
Alignment:
Q  263 ggatttgagagtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    |||| ||||||||| ||||||||| |||| |||| ||||||||||||||    
T  27596361 ggatctgagagtgtcctcctcctcgaggtcttagattcgattctctctg 27596409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 271 - 311
Target Start/End: Original strand, 29173532 - 29173572
Alignment:
Q  271 gagtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    |||||||||||||||| |||||| |||||||||| ||||||    
T  29173532 gagtgtgctcctcctcgaggtttcaggttcgattatctctg 29173572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 251 - 311
Target Start/End: Complemental strand, 16918633 - 16918572
Alignment:
Q  251 tggtattggtttgg-atttgagagtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    |||||||||||||| || || ||||||||||||||||||||| ||||||| |||||||||||    
T  16918633 tggtattggtttgggatctgggagtgtgctcctcctcaaggtcttaggttggattctctctg 16918572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 268 - 311
Target Start/End: Original strand, 19244148 - 19244191
Alignment:
Q  268 tgagagtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    ||||||||||||||||| |||||| | |||||||||||||||||    
T  19244148 tgagagtgtgctcctccccaaggtctcaggttcgattctctctg 19244191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 268 - 307
Target Start/End: Original strand, 37480114 - 37480153
Alignment:
Q  268 tgagagtgtgctcctcctcaaggttttaggttcgattctc 307  Q
    |||||||||||||||||||||||| | |||||||||||||    
T  37480114 tgagagtgtgctcctcctcaaggtctcaggttcgattctc 37480153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 309
Target Start/End: Complemental strand, 4262335 - 4262298
Alignment:
Q  272 agtgtgctcctcctcaaggttttaggttcgattctctc 309  Q
    |||||||||||||||||||| | |||||||||||||||    
T  4262335 agtgtgctcctcctcaaggtctcaggttcgattctctc 4262298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 307
Target Start/End: Original strand, 29503292 - 29503349
Alignment:
Q  251 tggtattggtttgg-atttgagagtgtgctcctcctcaaggttttaggttcgattctc 307  Q
    |||||||||||||| |  || ||||||||||||||||||||| | |||||||||||||    
T  29503292 tggtattggtttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctc 29503349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 308
Target Start/End: Complemental strand, 42327429 - 42327392
Alignment:
Q  271 gagtgtgctcctcctcaaggttttaggttcgattctct 308  Q
    ||||||||||||||||||||| | ||||||||||||||    
T  42327429 gagtgtgctcctcctcaaggtctcaggttcgattctct 42327392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 271 - 311
Target Start/End: Original strand, 13803537 - 13803577
Alignment:
Q  271 gagtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    ||||||||||||||||||||| | |||||||||| ||||||    
T  13803537 gagtgtgctcctcctcaaggtctcaggttcgattatctctg 13803577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 271 - 311
Target Start/End: Complemental strand, 21304028 - 21303988
Alignment:
Q  271 gagtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    |||| |||||||||| ||||||| |||||||||||||||||    
T  21304028 gagtatgctcctcctgaaggtttcaggttcgattctctctg 21303988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 263 - 311
Target Start/End: Complemental strand, 34041630 - 34041582
Alignment:
Q  263 ggatttgagagtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    |||| |||||||||||||||||||||||| | ||||| ||||| |||||    
T  34041630 ggatctgagagtgtgctcctcctcaaggtctcaggtttgattccctctg 34041582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 279 - 311
Target Start/End: Original strand, 40755644 - 40755676
Alignment:
Q  279 tcctcctcaaggttttaggttcgattctctctg 311  Q
    ||||||||||||| |||||||||||||||||||    
T  40755644 tcctcctcaaggtcttaggttcgattctctctg 40755676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000002; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 251 - 311
Target Start/End: Complemental strand, 8177237 - 8177176
Alignment:
Q  251 tggtattggtttgg-atttgagagtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    ||||||||| |||| || || ||||||||||||||||||||||| |||||||||||||||||    
T  8177237 tggtattggcttgggatctgggagtgtgctcctcctcaaggtttcaggttcgattctctctg 8177176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 264 - 311
Target Start/End: Original strand, 19088244 - 19088291
Alignment:
Q  264 gatttgagagtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    ||||||||| ||| |||||||||||||||||||||||||||| |||||    
T  19088244 gatttgagattgtactcctcctcaaggttttaggttcgattcactctg 19088291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 251 - 311
Target Start/End: Complemental strand, 33700828 - 33700767
Alignment:
Q  251 tggtattggtttggatt-tgagagtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    ||||||||| ||||| | || ||||||||||||||||||||| | |||||||||||||||||    
T  33700828 tggtattggcttggaatctgggagtgtgctcctcctcaaggtctcaggttcgattctctctg 33700767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 251 - 311
Target Start/End: Original strand, 51703800 - 51703861
Alignment:
Q  251 tggtattggtttggatt-tgagagtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    ||||||||| ||||| | || |||||||||||||||||| |||| |||||||||||||||||    
T  51703800 tggtattggcttggaatctgggagtgtgctcctcctcaaagtttcaggttcgattctctctg 51703861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 268 - 309
Target Start/End: Original strand, 51814533 - 51814574
Alignment:
Q  268 tgagagtgtgctcctcctcaaggttttaggttcgattctctc 309  Q
    |||||||||||||||||||||||| | |||||||||||||||    
T  51814533 tgagagtgtgctcctcctcaaggtctcaggttcgattctctc 51814574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 311
Target Start/End: Original strand, 2799904 - 2799944
Alignment:
Q  271 gagtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    ||||||||||||||||||||| | |||||||||||||||||    
T  2799904 gagtgtgctcctcctcaaggtctcaggttcgattctctctg 2799944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 311
Target Start/End: Original strand, 3265966 - 3266006
Alignment:
Q  271 gagtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    ||||||||||||||||||||| | |||||||||||||||||    
T  3265966 gagtgtgctcctcctcaaggtctcaggttcgattctctctg 3266006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 311
Target Start/End: Complemental strand, 22049870 - 22049822
Alignment:
Q  263 ggatttgagagtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    |||| |||||||||||| ||||||||||||| || ||||||||||||||    
T  22049870 ggatctgagagtgtgcttctcctcaaggtttgagattcgattctctctg 22049822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 311
Target Start/End: Original strand, 36371512 - 36371552
Alignment:
Q  271 gagtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    ||||||||||||||||||||| | |||||||||||||||||    
T  36371512 gagtgtgctcctcctcaaggtctgaggttcgattctctctg 36371552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 264 - 311
Target Start/End: Complemental strand, 1600333 - 1600286
Alignment:
Q  264 gatttgagagtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    |||||| ||||||||||||||| || |||| |||||||||||||||||    
T  1600333 gatttgggagtgtgctcctccttaaagtttcaggttcgattctctctg 1600286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 272 - 307
Target Start/End: Original strand, 24019066 - 24019101
Alignment:
Q  272 agtgtgctcctcctcaaggttttaggttcgattctc 307  Q
    |||||||||||||||||||| |||||||||||||||    
T  24019066 agtgtgctcctcctcaaggtcttaggttcgattctc 24019101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 268 - 311
Target Start/End: Original strand, 50919993 - 50920036
Alignment:
Q  268 tgagagtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    ||||||||||||| |||| ||||||| |||||||||||||||||    
T  50919993 tgagagtgtgctcatccttaaggtttcaggttcgattctctctg 50920036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 310
Target Start/End: Original strand, 11063599 - 11063637
Alignment:
Q  272 agtgtgctcctcctcaaggttttaggttcgattctctct 310  Q
    |||||| ||||||||||||| ||||||||||||||||||    
T  11063599 agtgtgttcctcctcaaggtcttaggttcgattctctct 11063637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 310
Target Start/End: Original strand, 44961800 - 44961846
Alignment:
Q  264 gatttgagagtgtgctcctcctcaaggttttaggttcgattctctct 310  Q
    ||||| |||||||||||||||||| ||| | ||||||||||||||||    
T  44961800 gatttaagagtgtgctcctcctcagggtctcaggttcgattctctct 44961846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 308
Target Start/End: Complemental strand, 15786354 - 15786317
Alignment:
Q  271 gagtgtgctcctcctcaaggttttaggttcgattctct 308  Q
    ||||||||||||||||||||| | ||||||||||||||    
T  15786354 gagtgtgctcctcctcaaggtctcaggttcgattctct 15786317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 271 - 311
Target Start/End: Original strand, 1247155 - 1247195
Alignment:
Q  271 gagtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    |||||| |||||||||||||| | |||||||||||||||||    
T  1247155 gagtgtactcctcctcaaggtctcaggttcgattctctctg 1247195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 271 - 311
Target Start/End: Original strand, 4566590 - 4566630
Alignment:
Q  271 gagtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    ||||||||||||||||| ||| | |||||||||||||||||    
T  4566590 gagtgtgctcctcctcagggtctcaggttcgattctctctg 4566630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 271 - 311
Target Start/End: Original strand, 8904456 - 8904496
Alignment:
Q  271 gagtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    ||||||||||||||||||||| | | |||||||||||||||    
T  8904456 gagtgtgctcctcctcaaggtctcaagttcgattctctctg 8904496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 271 - 307
Target Start/End: Complemental strand, 16170012 - 16169976
Alignment:
Q  271 gagtgtgctcctcctcaaggttttaggttcgattctc 307  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  16170012 gagtgtgttcctcctcaaggtttcaggttcgattctc 16169976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 271 - 307
Target Start/End: Complemental strand, 19528361 - 19528325
Alignment:
Q  271 gagtgtgctcctcctcaaggttttaggttcgattctc 307  Q
    ||||||||||||||||||||| | |||||||||||||    
T  19528361 gagtgtgctcctcctcaaggtctcaggttcgattctc 19528325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 275 - 311
Target Start/End: Complemental strand, 21547510 - 21547474
Alignment:
Q  275 gtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    |||||||||||| |||||| |||||||||||||||||    
T  21547510 gtgctcctcctcgaggtttcaggttcgattctctctg 21547474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 271 - 311
Target Start/End: Complemental strand, 23566373 - 23566333
Alignment:
Q  271 gagtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    ||||||||||||||| ||||||| |||||| ||||||||||    
T  23566373 gagtgtgctcctcctaaaggtttcaggttctattctctctg 23566333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 272 - 308
Target Start/End: Complemental strand, 45010768 - 45010732
Alignment:
Q  272 agtgtgctcctcctcaaggttttaggttcgattctct 308  Q
    |||||||||||||||||||||||| ||| ||||||||    
T  45010768 agtgtgctcctcctcaaggttttaagtttgattctct 45010732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.000000000007; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 271 - 311
Target Start/End: Complemental strand, 37274493 - 37274453
Alignment:
Q  271 gagtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  37274493 gagtgtgctcctcctcaaggtcttaggttcgattctctctg 37274453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 309
Target Start/End: Complemental strand, 49576949 - 49576890
Alignment:
Q  251 tggtattgg-tttggatttgagagtgtgctcctcctcaaggttttaggttcgattctctc 309  Q
    ||||||||| |||||| ||| ||||||||||||||||||||| | |||||||||||||||    
T  49576949 tggtattggctttggacttgggagtgtgctcctcctcaaggtctcaggttcgattctctc 49576890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 311
Target Start/End: Complemental strand, 7949488 - 7949448
Alignment:
Q  271 gagtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    ||||||||||||||||||||| | |||||||||||||||||    
T  7949488 gagtgtgctcctcctcaaggtctcaggttcgattctctctg 7949448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 310
Target Start/End: Original strand, 12798705 - 12798765
Alignment:
Q  251 tggtattggtttg-gatttgagagtgtgctcctcctcaaggttttaggttcgattctctct 310  Q
    ||||||||||||| ||| || ||||||||| |||||| |||||| ||||||||||||||||    
T  12798705 tggtattggtttgagatctgggagtgtgctgctcctcgaggtttcaggttcgattctctct 12798765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 311
Target Start/End: Complemental strand, 19680822 - 19680782
Alignment:
Q  271 gagtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    |||||||||| |||||||||| |||||||||||||||||||    
T  19680822 gagtgtgctcttcctcaaggtcttaggttcgattctctctg 19680782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 34661708 - 34661744
Alignment:
Q  272 agtgtgctcctcctcaaggttttaggttcgattctct 308  Q
    |||||||||||| ||||||||||||||||||||||||    
T  34661708 agtgtgctcctcttcaaggttttaggttcgattctct 34661744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 311
Target Start/End: Complemental strand, 37109385 - 37109345
Alignment:
Q  271 gagtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    ||||||||||||||||||||| | |||||||||||||||||    
T  37109385 gagtgtgctcctcctcaaggtctcaggttcgattctctctg 37109345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 268 - 311
Target Start/End: Complemental strand, 11592190 - 11592147
Alignment:
Q  268 tgagagtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    ||||||||||||||||||| |||| |||||||||||| ||||||    
T  11592190 tgagagtgtgctcctcctccaggtcttaggttcgattatctctg 11592147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 271 - 310
Target Start/End: Original strand, 23377998 - 23378037
Alignment:
Q  271 gagtgtgctcctcctcaaggttttaggttcgattctctct 310  Q
    ||||||||||||||||||||| | ||||||||||||||||    
T  23377998 gagtgtgctcctcctcaaggtctcaggttcgattctctct 23378037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 264 - 311
Target Start/End: Original strand, 51969052 - 51969099
Alignment:
Q  264 gatttgagagtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    |||||| ||||||||||||||||||||||| ||||||  |||||||||    
T  51969052 gatttgggagtgtgctcctcctcaaggtttcaggttcatttctctctg 51969099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 309
Target Start/End: Original strand, 38838839 - 38838877
Alignment:
Q  271 gagtgtgctcctcctcaaggttttaggttcgattctctc 309  Q
    |||| |||||||||||||||| |||||||||||||||||    
T  38838839 gagtatgctcctcctcaaggtcttaggttcgattctctc 38838877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 307
Target Start/End: Original strand, 44865378 - 44865412
Alignment:
Q  273 gtgtgctcctcctcaaggttttaggttcgattctc 307  Q
    ||||||||||||||||||| |||||||||||||||    
T  44865378 gtgtgctcctcctcaaggtcttaggttcgattctc 44865412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 300
Target Start/End: Complemental strand, 14451788 - 14451751
Alignment:
Q  263 ggatttgagagtgtgctcctcctcaaggttttaggttc 300  Q
    |||| |||||||||||||||||||||||| ||||||||    
T  14451788 ggatatgagagtgtgctcctcctcaaggtcttaggttc 14451751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 311
Target Start/End: Original strand, 38869789 - 38869850
Alignment:
Q  251 tggtattggtttgg-atttgagagtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    ||||||||| |||| || || ||||||||||||||||||||| | ||||||||||| |||||    
T  38869789 tggtattggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattccctctg 38869850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 271 - 311
Target Start/End: Original strand, 4249219 - 4249259
Alignment:
Q  271 gagtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    ||||||||||||||||||||| | ||||| |||||||||||    
T  4249219 gagtgtgctcctcctcaaggtctcaggtttgattctctctg 4249259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 271 - 311
Target Start/End: Original strand, 7093411 - 7093450
Alignment:
Q  271 gagtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    ||||||||||||  |||||||||||||||||||||||||||    
T  7093411 gagtgtgctcctt-tcaaggttttaggttcgattctctctg 7093450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 271 - 307
Target Start/End: Complemental strand, 8325413 - 8325377
Alignment:
Q  271 gagtgtgctcctcctcaaggttttaggttcgattctc 307  Q
    |||||||||| |||||||||| |||||||||||||||    
T  8325413 gagtgtgctcatcctcaaggtcttaggttcgattctc 8325377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 271 - 311
Target Start/End: Original strand, 28635738 - 28635778
Alignment:
Q  271 gagtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    |||||||||||||||  |||| |||||||||||||||||||    
T  28635738 gagtgtgctcctcctggaggtcttaggttcgattctctctg 28635778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 271 - 307
Target Start/End: Original strand, 46295139 - 46295175
Alignment:
Q  271 gagtgtgctcctcctcaaggttttaggttcgattctc 307  Q
    ||||||||||||||||||||| | |||||||||||||    
T  46295139 gagtgtgctcctcctcaaggtctcaggttcgattctc 46295175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 271 - 311
Target Start/End: Original strand, 51622527 - 51622567
Alignment:
Q  271 gagtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    ||||||||||||||||||||| | |||||||| ||||||||    
T  51622527 gagtgtgctcctcctcaaggtctcaggttcgactctctctg 51622567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 251 - 307
Target Start/End: Complemental strand, 2525 - 2468
Alignment:
Q  251 tggtattggttt-ggatttgagagtgtgctcctcctcaaggttttaggttcgattctc 307  Q
    |||||||||||| |||| || ||||||||||||||||||||| | |||||||||||||    
T  2525 tggtattggttttggatctgggagtgtgctcctcctcaaggtctcaggttcgattctc 2468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.0000000005; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 270 - 307
Target Start/End: Complemental strand, 38374634 - 38374597
Alignment:
Q  270 agagtgtgctcctcctcaaggttttaggttcgattctc 307  Q
    |||||||||||||||||||||| |||||||||||||||    
T  38374634 agagtgtgctcctcctcaaggtcttaggttcgattctc 38374597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 311
Target Start/End: Original strand, 11700203 - 11700247
Alignment:
Q  267 ttgagagtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    |||||||| |||||||||||||||| | |||||||||||||||||    
T  11700203 ttgagagtttgctcctcctcaaggtctcaggttcgattctctctg 11700247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 307
Target Start/End: Original strand, 19553475 - 19553531
Alignment:
Q  251 tggtattggtttggatttgagagtgtgctcctcctcaaggttttaggttcgattctc 307  Q
    ||||||||| |||||  || ||||||||||||||||||||| |||||||| ||||||    
T  19553475 tggtattggcttggacctgggagtgtgctcctcctcaaggtcttaggttcaattctc 19553531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 311
Target Start/End: Complemental strand, 25655262 - 25655222
Alignment:
Q  271 gagtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    ||||||| ||||||||||||||| |||||||||||||||||    
T  25655262 gagtgtgatcctcctcaaggtttcaggttcgattctctctg 25655222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 311
Target Start/End: Complemental strand, 26459444 - 26459404
Alignment:
Q  271 gagtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    ||||||||||||||||||||| | |||||||||||||||||    
T  26459444 gagtgtgctcctcctcaaggtctcaggttcgattctctctg 26459404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 271 - 310
Target Start/End: Original strand, 43215226 - 43215265
Alignment:
Q  271 gagtgtgctcctcctcaaggttttaggttcgattctctct 310  Q
    ||||||||||||||||||||| | ||||||||||||||||    
T  43215226 gagtgtgctcctcctcaaggtctcaggttcgattctctct 43215265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 310
Target Start/End: Original strand, 18363731 - 18363777
Alignment:
Q  264 gatttgagagtgtgctcctcctcaaggttttaggttcgattctctct 310  Q
    |||||| ||||||||||||||||||||| | ||||| ||||||||||    
T  18363731 gatttgggagtgtgctcctcctcaaggtctcaggtttgattctctct 18363777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 311
Target Start/End: Original strand, 2962480 - 2962541
Alignment:
Q  251 tggtattggtttggatt-tgagagtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    |||||||||||||||   || ||||||||||||||||||| | | |||||||||||||||||    
T  2962480 tggtattggtttggaacctgtgagtgtgctcctcctcaagatctcaggttcgattctctctg 2962541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 309
Target Start/End: Original strand, 14058292 - 14058333
Alignment:
Q  268 tgagagtgtgctcctcctcaaggttttaggttcgattctctc 309  Q
    ||||||||||||| |||||||||| | |||||||||||||||    
T  14058292 tgagagtgtgctcatcctcaaggtctcaggttcgattctctc 14058333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 309
Target Start/End: Original strand, 14368320 - 14368361
Alignment:
Q  268 tgagagtgtgctcctcctcaaggttttaggttcgattctctc 309  Q
    ||||||||||||| |||||||||| | |||||||||||||||    
T  14368320 tgagagtgtgctcatcctcaaggtctcaggttcgattctctc 14368361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 309
Target Start/End: Complemental strand, 17041045 - 17041008
Alignment:
Q  272 agtgtgctcctcctcaaggttttaggttcgattctctc 309  Q
    |||||||||||||||||||| | |||||||||||||||    
T  17041045 agtgtgctcctcctcaaggtctcaggttcgattctctc 17041008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 311
Target Start/End: Original strand, 21558173 - 21558210
Alignment:
Q  274 tgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    |||||||||||||||||| | |||||||||||||||||    
T  21558173 tgtgctcctcctcaaggtctcaggttcgattctctctg 21558210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 307
Target Start/End: Complemental strand, 29916843 - 29916806
Alignment:
Q  270 agagtgtgctcctcctcaaggttttaggttcgattctc 307  Q
    |||||||||||||||||||||| | |||||||||||||    
T  29916843 agagtgtgctcctcctcaaggtctcaggttcgattctc 29916806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 307
Target Start/End: Complemental strand, 37085604 - 37085547
Alignment:
Q  251 tggtattggtttgg-atttgagagtgtgctcctcctcaaggttttaggttcgattctc 307  Q
    ||||||||| |||| ||||| |||||||||| ||||| |||||| |||||||||||||    
T  37085604 tggtattggcttgggatttgggagtgtgctcatcctcgaggtttcaggttcgattctc 37085547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 311
Target Start/End: Original strand, 38851277 - 38851338
Alignment:
Q  251 tggtattggtttggatt-tgagagtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    ||||||||||||||| | || ||||||||| ||||||||||||| | ||| |||||||||||    
T  38851277 tggtattggtttggaatctgtgagtgtgcttctcctcaaggtttcatgtttgattctctctg 38851338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 271 - 311
Target Start/End: Original strand, 2882992 - 2883032
Alignment:
Q  271 gagtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    ||||||||||||||||||||| | |||||| ||||||||||    
T  2882992 gagtgtgctcctcctcaaggtctcaggttcaattctctctg 2883032  T

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Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 271 - 311
Target Start/End: Complemental strand, 13106816 - 13106776
Alignment:
Q  271 gagtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    |||||| |||||||||||||| | |||||||||||||||||    
T  13106816 gagtgtactcctcctcaaggtctcaggttcgattctctctg 13106776  T

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Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 271 - 311
Target Start/End: Original strand, 15137595 - 15137635
Alignment:
Q  271 gagtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    ||||||||||||||||||||| | ||||| |||||||||||    
T  15137595 gagtgtgctcctcctcaaggtctcaggttagattctctctg 15137635  T

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Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 271 - 307
Target Start/End: Original strand, 22760905 - 22760941
Alignment:
Q  271 gagtgtgctcctcctcaaggttttaggttcgattctc 307  Q
    ||||||||||||||||||||| | |||||||||||||    
T  22760905 gagtgtgctcctcctcaaggtctcaggttcgattctc 22760941  T

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Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 271 - 311
Target Start/End: Complemental strand, 27313768 - 27313728
Alignment:
Q  271 gagtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    |||| |||||||||||||||||| || ||||||||||||||    
T  27313768 gagtttgctcctcctcaaggtttcagattcgattctctctg 27313728  T

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Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 271 - 311
Target Start/End: Complemental strand, 41519298 - 41519258
Alignment:
Q  271 gagtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    ||||||||||||||||||||| | ||||||| |||||||||    
T  41519298 gagtgtgctcctcctcaaggtctcaggttcgcttctctctg 41519258  T

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Target: scaffold0238 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 311
Target Start/End: Original strand, 5235 - 5275
Alignment:
Q  271 gagtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    ||||||||||||||| || ||||||||||||||||||||||    
T  5235 gagtgtgctcctccttaaagttttaggttcgattctctctg 5275  T

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Target: scaffold0238; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 271 - 311
Target Start/End: Complemental strand, 2745 - 2705
Alignment:
Q  271 gagtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    |||| |||||||||||||||| | |||||||||||||||||    
T  2745 gagtctgctcctcctcaaggtctcaggttcgattctctctg 2705  T

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Target: scaffold0300 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 263 - 310
Target Start/End: Original strand, 4374 - 4421
Alignment:
Q  263 ggatttgagagtgtgctcctcctcaaggttttaggttcgattctctct 310  Q
    ||||||| |||||||||||| || ||||||||||||||||||| ||||    
T  4374 ggatttgggagtgtgctccttcttaaggttttaggttcgattccctct 4421  T

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Target: scaffold0194 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 251 - 309
Target Start/End: Complemental strand, 13101 - 13042
Alignment:
Q  251 tggtattggtttg-gatttgagagtgtgctcctcctcaaggttttaggttcgattctctc 309  Q
    ||||||||| ||| ||| || ||||||||||||||||||||| | |||||||||||||||    
T  13101 tggtattggcttgagatctgggagtgtgctcctcctcaaggtctcaggttcgattctctc 13042  T

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Target: chr6 (Bit Score: 32; Significance: 0.000000007; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 271 - 310
Target Start/End: Complemental strand, 12188337 - 12188298
Alignment:
Q  271 gagtgtgctcctcctcaaggttttaggttcgattctctct 310  Q
    ||||||||||||||||||||||| | ||||||||||||||    
T  12188337 gagtgtgctcctcctcaaggtttcaagttcgattctctct 12188298  T

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Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 268 - 311
Target Start/End: Complemental strand, 17328301 - 17328258
Alignment:
Q  268 tgagagtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    ||||||| |||||||| ||||||||| |||||||||||||||||    
T  17328301 tgagagtatgctcctcttcaaggtttcaggttcgattctctctg 17328258  T

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Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 311
Target Start/End: Original strand, 28363958 - 28364019
Alignment:
Q  251 tggtattggtttgg-atttgagagtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    |||||||||||||| || || ||||||||||||||||||||| | || ||||||| ||||||    
T  28363958 tggtattggtttgggatctgcgagtgtgctcctcctcaaggtctcagattcgattatctctg 28364019  T

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Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 295
Target Start/End: Complemental strand, 34293871 - 34293826
Alignment:
Q  251 tggtattggtttgga-tttgagagtgtgctcctcctcaaggtttta 295  Q
    ||||||||||||||| |||| |||||||||||||||||| ||||||    
T  34293871 tggtattggtttggaatttgggagtgtgctcctcctcaaagtttta 34293826  T

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Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 271 - 311
Target Start/End: Complemental strand, 1056719 - 1056679
Alignment:
Q  271 gagtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    |||| ||||| |||||||||||||| |||||||||||||||    
T  1056719 gagtatgctcatcctcaaggttttaagttcgattctctctg 1056679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 268 - 308
Target Start/End: Original strand, 16535223 - 16535263
Alignment:
Q  268 tgagagtgtgctcctcctcaaggttttaggttcgattctct 308  Q
    |||||||||||||||||| || |||| ||||||||||||||    
T  16535223 tgagagtgtgctcctcctaaaagtttcaggttcgattctct 16535263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 271 - 307
Target Start/End: Complemental strand, 24641224 - 24641188
Alignment:
Q  271 gagtgtgctcctcctcaaggttttaggttcgattctc 307  Q
    |||||||||||||||| |||||| |||||||||||||    
T  24641224 gagtgtgctcctcctcgaggtttaaggttcgattctc 24641188  T

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Target: scaffold0008 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 309
Target Start/End: Original strand, 49340 - 49386
Alignment:
Q  263 ggatttgagagtgtgctcctcctcaaggttttaggttcgattctctc 309  Q
    ||||||||||||||||||||| || |||| | |||||||||||||||    
T  49340 ggatttgagagtgtgctcctcttcgaggtatcaggttcgattctctc 49386  T

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Target: scaffold0299 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 311
Target Start/End: Original strand, 11549 - 11610
Alignment:
Q  251 tggtattggtttgg-atttgagagtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    ||||||||| |||| || || |||||||||||||||| |||| | |||||||||||||||||    
T  11549 tggtattggcttgggatctgggagtgtgctcctcctcgaggtctcaggttcgattctctctg 11610  T

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Target: scaffold0006 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 311
Target Start/End: Original strand, 18344 - 18381
Alignment:
Q  274 tgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  18344 tgtgctcctcctcaaggtttcaggtttgattctctctg 18381  T

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Target: scaffold0180 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 271 - 311
Target Start/End: Complemental strand, 19996 - 19956
Alignment:
Q  271 gagtgtgctcctcctcaaggttttaggttcgattctctctg 311  Q
    |||| |||||||||||||||| | |||||||||||||||||    
T  19996 gagtatgctcctcctcaaggtctcaggttcgattctctctg 19956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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