View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2218_low_8 (Length: 482)
Name: NF2218_low_8
Description: NF2218
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2218_low_8 |
 | |
|
| [»] scaffold0133 (5 HSPs) |
| | |
|
| [»] scaffold0144 (2 HSPs) |
| | |
|
| [»] scaffold0256 (1 HSPs) |
| | |
|
| [»] scaffold0511 (1 HSPs) |
| | |
|
| [»] scaffold0230 (1 HSPs) |
| | |
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Alignment Details
Target: chr6 (Bit Score: 225; Significance: 1e-124; HSPs: 17)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 210 - 466
Target Start/End: Original strand, 16987174 - 16987430
Alignment:
| Q |
210 |
atttcaaaatccttaggaaaaacagcacagaaggtaaaacatggccttaataacaatttcaagttgaagtagcttagtctcaaagcagacatgataggat |
309 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
16987174 |
atttcaaaatccttaggaaaaacagcacagaaggtaaaacatggccttagtgacaatttcatgttgaagtagcttagtctcaaagcagaaatgataggat |
16987273 |
T |
|
| Q |
310 |
catcctcaggtaaattccaaaactcactttccagtacagaaatccattgatgttcgtcagtttcacattgcaaactgcttcccaatactttagcagcaag |
409 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
16987274 |
catcctcaggtaaattccaaatctcactttccagtacagaaatccattgatgttcgtcagtttcacgttgcaaactgcttcccaatactttagcagcaag |
16987373 |
T |
|
| Q |
410 |
aggtgaacccacaaattttctcaccaacttcttacctattgccacaacctctgcacg |
466 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |
|
|
| T |
16987374 |
aggtgaacccacaaattttctcaccaacttcttacctatttccacaagctctgcacg |
16987430 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 210 - 474
Target Start/End: Original strand, 16787687 - 16787951
Alignment:
| Q |
210 |
atttcaaaatccttaggaaaaacagcacagaaggtaaaacatggccttaataacaatttcaagttgaagtagcttagtctcaaagcagacatgataggat |
309 |
Q |
| |
|
|||||||||||||| ||||||||||| |||||||||||||||||||| || ||||||||||||| |||||||||||||||||| ||||||||||||||| |
|
|
| T |
16787687 |
atttcaaaatccttgggaaaaacagcgcagaaggtaaaacatggcctcaaggacaatttcaagttaaagtagcttagtctcaaaacagacatgataggat |
16787786 |
T |
|
| Q |
310 |
catcctcaggtaaattccaaaactcactttccagtacagaaatccattgatgttcgtcagtttcacattgcaaactgcttcccaatactttagcagcaag |
409 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || | || ||||||||||||||||||||||||||||||| |
|
|
| T |
16787787 |
catcctcagttaaattccaaaactcactttccagtacagaaatccattgatgttcgtcgcttgtaaatcgcaaactgcttcccaatactttagcagcaag |
16787886 |
T |
|
| Q |
410 |
aggtgaacccacaaattttctcaccaacttcttacctattgccacaacctctgcacgttcatctc |
474 |
Q |
| |
|
|| |||||||||| |||||||||| |||||||| |||||| |||||| |||||||||||| |||| |
|
|
| T |
16787887 |
agttgaacccacacattttctcactaacttcttgcctatttccacaagctctgcacgttcttctc |
16787951 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 173; E-Value: 8e-93
Query Start/End: Original strand, 210 - 466
Target Start/End: Original strand, 16796889 - 16797145
Alignment:
| Q |
210 |
atttcaaaatccttaggaaaaacagcacagaaggtaaaacatggccttaataacaatttcaagttgaagtagcttagtctcaaagcagacatgataggat |
309 |
Q |
| |
|
|||||||||||||||||||||||||| ||||| |||||||||||||| ||| ||||||||||||| |||||||||||| ||||||||||||||||| ||| |
|
|
| T |
16796889 |
atttcaaaatccttaggaaaaacagcgcagaaagtaaaacatggcctcaatgacaatttcaagttaaagtagcttagtgtcaaagcagacatgatacgat |
16796988 |
T |
|
| Q |
310 |
catcctcaggtaaattccaaaactcactttccagtacagaaatccattgatgttcgtcagtttcacattgcaaactgcttcccaatactttagcagcaag |
409 |
Q |
| |
|
|| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| || | | ||||||||||||||||||||||||||||||| |
|
|
| T |
16796989 |
caacctgaggtaaattccaaaattcactttccagtacagaaatccattgatgttcgtcgcttgtaaagcgcaaactgcttcccaatactttagcagcaag |
16797088 |
T |
|
| Q |
410 |
aggtgaacccacaaattttctcaccaacttcttacctattgccacaacctctgcacg |
466 |
Q |
| |
|
||||||||||||| |||||||||| |||||||| ||||||||||||| ||||||||| |
|
|
| T |
16797089 |
aggtgaacccacacattttctcactaacttcttgcctattgccacaagctctgcacg |
16797145 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 19 - 210
Target Start/End: Original strand, 16986738 - 16986929
Alignment:
| Q |
19 |
caatgatgagagttgatgagaacttgtatgtaaagctcgaagaggagtttttgatagtaacacatttaaattcttggagggtggtttatactcaagaaag |
118 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
16986738 |
caatgatgatagttgatgagaacttgtatgtaaagctcgaagaggagtttttgatagtagcgcatttaaattcttggagggttgtttatactcaagaaag |
16986837 |
T |
|
| Q |
119 |
gttcgcaaggaatcaaatttttggtagggaatcatgtaatcatgttttgattttttatcaaagagacttatatggtgaactctaattgacaa |
210 |
Q |
| |
|
|||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
16986838 |
gttcgcaaggaatcaactttttggcagggaatcatgtaatcatgttttgattttttatcaaagagactcatatggtgaactctaattgacaa |
16986929 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 19 - 207
Target Start/End: Original strand, 16787251 - 16787439
Alignment:
| Q |
19 |
caatgatgagagttgatgagaacttgtatgtaaagctcgaagaggagtttttgatagtaacacatttaaattcttggagggtggtttatactcaagaaag |
118 |
Q |
| |
|
||||||||||||||||||| |||||| |||||||||||||||||| || | ||||| |||| |||||| |||||||| ||||||||||||||||||||| |
|
|
| T |
16787251 |
caatgatgagagttgatgaaaacttgcatgtaaagctcgaagaggggtgctagatagcaacatatttaagttcttggaaggtggtttatactcaagaaag |
16787350 |
T |
|
| Q |
119 |
gttcgcaaggaatcaaatttttggtagggaatcatgtaatcatgttttgattttttatcaaagagacttatatggtgaactctaattga |
207 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
16787351 |
gttcgcaaggaatcaaatttttggaagggaatcatgtagtcatcttttgatttgttatcaaagagacttatatggtgaactctaattga |
16787439 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 210 - 466
Target Start/End: Original strand, 16657732 - 16657988
Alignment:
| Q |
210 |
atttcaaaatccttaggaaaaacagcacagaaggtaaaacatggccttaataacaatttcaagttgaagtagcttagtctcaaagcagacatgataggat |
309 |
Q |
| |
|
||||||||||||||||||||||||||||| || |||||||||||||| ||| ||||||||||||| |||||||| ||||||||||||||||||| | | | |
|
|
| T |
16657732 |
atttcaaaatccttaggaaaaacagcacaaaaagtaaaacatggcctcaatgacaatttcaagttaaagtagctcagtctcaaagcagacatgacatggt |
16657831 |
T |
|
| Q |
310 |
catcctcaggtaaattccaaaactcactttccagtacagaaatccattgatgttcgtcagtttcacattgcaaactgcttcccaatactttagcagcaag |
409 |
Q |
| |
|
||| |||| ||||||||||||||||||||||| |||||||||||||||||||| || ||| | | | ||| |||||||||||||||||||||||| |
|
|
| T |
16657832 |
tatcatcagctaaattccaaaactcactttccaccacagaaatccattgatgttcatcgcttttaaagcgtaaaaggcttcccaatactttagcagcaag |
16657931 |
T |
|
| Q |
410 |
aggtgaacccacaaattttctcaccaacttcttacctattgccacaacctctgcacg |
466 |
Q |
| |
|
||||||||||||| |||||||||| ||||| | |||||| |||||| |||||||| |
|
|
| T |
16657932 |
aggtgaacccacacattttctcactaacttttggcctatttccacaagatctgcacg |
16657988 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 210 - 466
Target Start/End: Complemental strand, 16868441 - 16868185
Alignment:
| Q |
210 |
atttcaaaatccttaggaaaaacagcacagaaggtaaaacatggccttaataacaatttcaagttgaagtagcttagtctcaaagcagacatgataggat |
309 |
Q |
| |
|
||||||||||||||||||||||||||||| || |||||||||||||| ||| ||||||||||||| |||||||| ||||||||||||||||||| | | | |
|
|
| T |
16868441 |
atttcaaaatccttaggaaaaacagcacaaaaagtaaaacatggcctcaatgacaatttcaagttaaagtagctcagtctcaaagcagacatgacatggt |
16868342 |
T |
|
| Q |
310 |
catcctcaggtaaattccaaaactcactttccagtacagaaatccattgatgttcgtcagtttcacattgcaaactgcttcccaatactttagcagcaag |
409 |
Q |
| |
|
||| || | ||||||||||||||||||||||| |||||| ||||||||||||| || ||| | | ||||| |||||||||||||||||||||||| |
|
|
| T |
16868341 |
tatcatctgctaaattccaaaactcactttccaccacagaagtccattgatgttcatcgcttttaaagcgcaaaaggcttcccaatactttagcagcaag |
16868242 |
T |
|
| Q |
410 |
aggtgaacccacaaattttctcaccaacttcttacctattgccacaacctctgcacg |
466 |
Q |
| |
|
||||||||||||| |||||||||| ||||| | |||||| |||||| ||||||||| |
|
|
| T |
16868241 |
aggtgaacccacacattttctcactaacttttggcctatttccacaagctctgcacg |
16868185 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 214 - 466
Target Start/End: Original strand, 17069230 - 17069482
Alignment:
| Q |
214 |
caaaatccttaggaaaaacagcacagaaggtaaaacatggccttaataacaatttcaagttgaagtagcttagtctcaaagcagacatgataggatcatc |
313 |
Q |
| |
|
|||||||||||||||||||| ||||||| |||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||| ||| | || |
|
|
| T |
17069230 |
caaaatccttaggaaaaacaacacagaaagtaaaacatggcctcaatgacaatttcaagttatagtagcttagtctcaaagcagacatgacagggttctc |
17069329 |
T |
|
| Q |
314 |
ctcaggtaaattccaaaactcactttccagtacagaaatccattgatgttcgtcagtttcacattgcaaactgcttcccaatactttagcagcaagaggt |
413 |
Q |
| |
|
|| ||||||||||||||||||||||| |||||||||||||||||||| || ||| | | ||||| |||||||||||||||||||||||||||| |
|
|
| T |
17069330 |
atcgtctaaattccaaaactcactttccaccacagaaatccattgatgttcatcgcttttaaagcgcaaaaggcttcccaatactttagcagcaagaggt |
17069429 |
T |
|
| Q |
414 |
gaacccacaaattttctcaccaacttcttacctattgccacaacctctgcacg |
466 |
Q |
| |
|
||||||||| |||||||||| ||||| | |||||| |||||| ||||||||| |
|
|
| T |
17069430 |
gaacccacacattttctcactaacttttggcctatttccacaagctctgcacg |
17069482 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 210 - 464
Target Start/End: Original strand, 16780819 - 16781073
Alignment:
| Q |
210 |
atttcaaaatccttaggaaaaacagcacagaaggtaaaacatggccttaataacaatttcaagttgaagtagcttagtctcaaagcagacatgataggat |
309 |
Q |
| |
|
||||||||||||||||||||||||||||| || |||||||| |||||||| |||| ||||| || |||||||||||||||||||||||||||||||| | |
|
|
| T |
16780819 |
atttcaaaatccttaggaaaaacagcacaaaaagtaaaacacggccttaaggacaaattcaaattaaagtagcttagtctcaaagcagacatgatagggt |
16780918 |
T |
|
| Q |
310 |
catcctcaggtaaattccaaaactcactttccagtacagaaatccattgatgttcgtcagtttcacattgcaaactgcttcccaatactttagcagcaag |
409 |
Q |
| |
|
|||||||| ||| ||||||| |||||||||| |||||||| |||||||||||| ||| ||| | | ||||| ||||||||| || || |||||||| |
|
|
| T |
16780919 |
tatcctcagataacttccaaagctcactttcctttacagaaagccattgatgttcctcatttttaaagcgcaaaaggcttcccaaaaccttggcagcaag |
16781018 |
T |
|
| Q |
410 |
aggtgaacccacaaattttctcaccaacttcttacctattgccacaacctctgca |
464 |
Q |
| |
|
|||||||||||| ||||| |||| | || ||| |||||||| ||| ||||||| |
|
|
| T |
16781019 |
tggtgaacccacacattttatcactatctccttgcctattgctgcaagctctgca |
16781073 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 210 - 463
Target Start/End: Complemental strand, 18806637 - 18806384
Alignment:
| Q |
210 |
atttcaaaatccttaggaaaaacagcacagaaggtaaaacatggccttaataacaatttcaagttgaagtagcttagtctcaaagcagacatgataggat |
309 |
Q |
| |
|
||||||||||||||||||||||| ||||| || |||||||| |||| | | | |||||||| || |||||||| ||||||||| ||||||||||||||| |
|
|
| T |
18806637 |
atttcaaaatccttaggaaaaaccgcacaaaaagtaaaacacagcctcagtgataatttcaaattaaagtagctgagtctcaaaacagacatgataggat |
18806538 |
T |
|
| Q |
310 |
catcctcaggtaaattccaaaactcactttccagtacagaaatccattgatgttcgtcagtttcacattgcaaactgcttcccaatactttagcagcaag |
409 |
Q |
| |
|
||||| | ||| ||||||||| ||||||| |||||||| |||||||||||| ||||||| | | ||||| |||||| | |||||| || ||||| |
|
|
| T |
18806537 |
tgtcctcggataagctccaaaacttactttcctttacagaaagccattgatgttcctcagttttaaagcgcaaaaggcttcctagtacttttgcggcaag |
18806438 |
T |
|
| Q |
410 |
aggtgaacccacaaattttctcaccaacttcttacctattgccacaacctctgc |
463 |
Q |
| |
|
||||||||||||| |||||||||| |||| ||| ||||||||||||| |||||| |
|
|
| T |
18806437 |
aggtgaacccacacattttctcactaactccttgcctattgccacaagctctgc |
18806384 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 210 - 466
Target Start/End: Complemental strand, 18873631 - 18873375
Alignment:
| Q |
210 |
atttcaaaatccttaggaaaaacagcacagaaggtaaaacatggccttaataacaatttcaagttgaagtagcttagtctcaaagcagacatgataggat |
309 |
Q |
| |
|
||||||||||||||||||||||| ||||| || |||||||| |||| | | | |||||||| || |||||||| |||||||| ||||||||||||||| |
|
|
| T |
18873631 |
atttcaaaatccttaggaaaaaccgcacaaaaagtaaaacacagcctcagtgataatttcaaattaaagtagctgagtctcaatacagacatgataggat |
18873532 |
T |
|
| Q |
310 |
catcctcaggtaaattccaaaactcactttccagtacagaaatccattgatgttcgtcagtttcacattgcaaactgcttcccaatactttagcagcaag |
409 |
Q |
| |
|
||||| | ||| ||||||||| ||||||| |||||||| |||||||||||| ||||||| | | ||||| |||||| | |||||| || ||||| |
|
|
| T |
18873531 |
tgtcctcggataagctccaaaacttactttcctttacagaaagccattgatgttcctcagttttaaagcgcaaaaggcttcctagtacttttgcggcaag |
18873432 |
T |
|
| Q |
410 |
aggtgaacccacaaattttctcaccaacttcttacctattgccacaacctctgcacg |
466 |
Q |
| |
|
||| ||||||||| |||||||||| |||| ||| ||||||||||||| ||||||||| |
|
|
| T |
18873431 |
aggagaacccacacattttctcactaactccttgcctattgccacaagctctgcacg |
18873375 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 19 - 206
Target Start/End: Original strand, 16657296 - 16657483
Alignment:
| Q |
19 |
caatgatgagagttgatgagaacttgtatgtaaagctcgaagaggagtttttgatagtaacacatttaaattcttggagggtggtttatactcaagaaag |
118 |
Q |
| |
|
|||||| |||||||||| ||||||| || ||||||||| |||||||| ||||||| ||| ||| |||||||||| | ||| | |||||||||| || |
|
|
| T |
16657296 |
caatgacgagagttgataagaacttatacataaagctcggagaggagtgcttgatagaaacgcatctaaattcttgcaaggtcgcgtatactcaaggaaa |
16657395 |
T |
|
| Q |
119 |
gttcgcaaggaatcaaatttttggtagggaatcatgtaatcatgttttgattttttatcaaagagacttatatggtgaactctaattg |
206 |
Q |
| |
|
|||||||||||||||| ||||||| ||||||||||||| |||| ||||||||| |||||| | || || ||||||||||||||||||| |
|
|
| T |
16657396 |
gttcgcaaggaatcaactttttggaagggaatcatgtagtcatcttttgatttgttatcacacaggctgatatggtgaactctaattg |
16657483 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 335 - 466
Target Start/End: Original strand, 16837525 - 16837656
Alignment:
| Q |
335 |
actttccagtacagaaatccattgatgttcgtcagtttcacattgcaaactgcttcccaatactttagcagcaagaggtgaacccacaaattttctcacc |
434 |
Q |
| |
|
|||||||| |||||||||||||||||||| || ||| | | ||||| ||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
16837525 |
actttccaccacagaaatccattgatgttcatcgcttttaaagcgcaaaaggcttcccaatactttagcagcaagaggtgaacccacacattttctcact |
16837624 |
T |
|
| Q |
435 |
aacttcttacctattgccacaacctctgcacg |
466 |
Q |
| |
|
||||| | |||||| |||||| ||||||||| |
|
|
| T |
16837625 |
aacttttggcctatttccacaagctctgcacg |
16837656 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 315 - 474
Target Start/End: Original strand, 16843628 - 16843787
Alignment:
| Q |
315 |
tcaggtaaattccaaaactcactttccagtacagaaatccattgatgttcgtcagtttcacattgcaaactgcttcccaatactttagcagcaagaggtg |
414 |
Q |
| |
|
|||| ||||||||||| |||||||||| || ||||| ||||||| ||| ||||||| | | ||| | |||||| | |||||| ||||||||||| | |
|
|
| T |
16843628 |
tcagataaattccaaatctcactttcctttatagaaagccattgacattcctcagttttaaaccgcagaaggcttcctagtactttggcagcaagaggcg |
16843727 |
T |
|
| Q |
415 |
aacccacaaattttctcaccaacttcttacctattgccacaacctctgcacgttcatctc |
474 |
Q |
| |
|
|||||||| ||||||| || | || ||||||||||| |||| ||||||||||| |||| |
|
|
| T |
16843728 |
aacccacacattttctaactatctccttacctattgttacaaggtctgcacgttcttctc |
16843787 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 155
Target Start/End: Original strand, 16796447 - 16796586
Alignment:
| Q |
19 |
caatgatgagagttgatgagaacttgtatgtaaagctcgaagaggagtttttgatagtaacacatttaaattcttggagg---gtggtttatactcaaga |
115 |
Q |
| |
|
|||||| |||| |||| |||||||||| |||||||||| |||||| ||||| | ||||||| |||||| ||| || |||||||| | |||||| |
|
|
| T |
16796447 |
caatgaagagaattgacaagaacttgtacgtaaagctcggagaggaacgattgatggcaacacatctaaatttatggtggtgggtggtttaaattcaaga |
16796546 |
T |
|
| Q |
116 |
aaggttcgcaaggaatcaaatttttggtagggaatcatgt |
155 |
Q |
| |
|
|||||||||||||| |||| ||||| | | |||||||||| |
|
|
| T |
16796547 |
aaggttcgcaaggattcaacttttttgaaaggaatcatgt |
16796586 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 155
Target Start/End: Original strand, 17068787 - 17068923
Alignment:
| Q |
19 |
caatgatgagagttgatgagaacttgtatgtaaagctcgaagaggagtttttgatagtaacacatttaaattcttggagggtggtttatactcaagaaag |
118 |
Q |
| |
|
|||||| |||||||||| ||||| || | |||||||||| |||| | | | ||||| ||||||| | || | ||| ||| ||||||| ||||||||| |
|
|
| T |
17068787 |
caatgacgagagttgataagaacctgaacgtaaagctcggagagaaatgatcgatagcaacacatctgaacttttgtaggttggtttaagttcaagaaag |
17068886 |
T |
|
| Q |
119 |
gttcgcaaggaatcaaatttttggtagggaatcatgt |
155 |
Q |
| |
|
||||||||||| |||| ||||| | | |||||||||| |
|
|
| T |
17068887 |
gttcgcaaggattcaacttttttgaaaggaatcatgt |
17068923 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 250
Target Start/End: Complemental strand, 18870547 - 18870507
Alignment:
| Q |
210 |
atttcaaaatccttaggaaaaacagcacagaaggtaaaaca |
250 |
Q |
| |
|
||||||||||||||||||||||| |||| ||||||||||| |
|
|
| T |
18870547 |
atttcaaaatccttaggaaaaacctcacaaaaggtaaaaca |
18870507 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0133 (Bit Score: 161; Significance: 1e-85; HSPs: 5)
Name: scaffold0133
Description:
Target: scaffold0133; HSP #1
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 210 - 466
Target Start/End: Original strand, 12569 - 12825
Alignment:
| Q |
210 |
atttcaaaatccttaggaaaaacagcacagaaggtaaaacatggccttaataacaatttcaagttgaagtagcttagtctcaaagcagacatgataggat |
309 |
Q |
| |
|
|||||| |||| || ||||||||||||||||| |||||||||||||| ||| ||||||||||||| || ||||||||||||||||||||||||||||||| |
|
|
| T |
12569 |
atttcataatctttgggaaaaacagcacagaaagtaaaacatggcctcaatgacaatttcaagttaaaatagcttagtctcaaagcagacatgataggat |
12668 |
T |
|
| Q |
310 |
catcctcaggtaaattccaaaactcactttccagtacagaaatccattgatgttcgtcagtttcacattgcaaactgcttcccaatactttagcagcaag |
409 |
Q |
| |
|
|| ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| || | | |||||||||||| ||||||||||||||||| |
|
|
| T |
12669 |
caacctcaggtaaactccaaaactcactttctagtacagaaatccattgatgttcgtcacttgtaaagcacaaactgcttcctaatactttagcagcaag |
12768 |
T |
|
| Q |
410 |
aggtgaacccacaaattttctcaccaacttcttacctattgccacaacctctgcacg |
466 |
Q |
| |
|
||||||||||||| |||||||||| ||||| || ||||||||||||| ||||||||| |
|
|
| T |
12769 |
aggtgaacccacacattttctcactaactttttgcctattgccacaagctctgcacg |
12825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0133; HSP #2
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 210 - 466
Target Start/End: Original strand, 8227 - 8483
Alignment:
| Q |
210 |
atttcaaaatccttaggaaaaacagcacagaaggtaaaacatggccttaataacaatttcaagttgaagtagcttagtctcaaagcagacatgataggat |
309 |
Q |
| |
|
||||||||| |||||||||||||||||||||| | ||||||||| || ||| ||||||||||||| |||||||||| |||||||||||||||||||| || |
|
|
| T |
8227 |
atttcaaaacccttaggaaaaacagcacagaaagcaaaacatggtctcaatgacaatttcaagttaaagtagcttattctcaaagcagacatgatagaat |
8326 |
T |
|
| Q |
310 |
catcctcaggtaaattccaaaactcactttccagtacagaaatccattgatgttcgtcagtttcacattgcaaactgcttcccaatactttagcagcaag |
409 |
Q |
| |
|
|| ||||||| ||||||||||| |||||||||||||||||||||||||||||||||| || ||| ||||||||| |||||||||||||||||||| |
|
|
| T |
8327 |
caacctcaggcaaattccaaaattcactttccagtacagaaatccattgatgttcgttgcttgtacagcacaaactgctacccaatactttagcagcaag |
8426 |
T |
|
| Q |
410 |
aggtgaacccacaaattttctcaccaacttcttacctattgccacaacctctgcacg |
466 |
Q |
| |
|
||||||||||||| |||||||||| ||||| || ||||||||||||| ||||||||| |
|
|
| T |
8427 |
aggtgaacccacacattttctcactaactttttgcctattgccacaagctctgcacg |
8483 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0133; HSP #3
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 21 - 210
Target Start/End: Original strand, 12135 - 12324
Alignment:
| Q |
21 |
atgatgagagttgatgagaacttgtatgtaaagctcgaagaggagtttttgatagtaacacatttaaattcttggagggtggtttatactcaagaaaggt |
120 |
Q |
| |
|
||||||||||| ||||||| ||||||||||||||||||| | ||| ||||||| ||||||| || |||||| |||||||||||||||||||||||||| |
|
|
| T |
12135 |
atgatgagagtcgatgagactttgtatgtaaagctcgaagcgaagtggttgatagaaacacatctagattctttgagggtggtttatactcaagaaaggt |
12234 |
T |
|
| Q |
121 |
tcgcaaggaatcaaatttttggtagggaatcatgtaatcatgttttgattttttatcaaagagacttatatggtgaactctaattgacaa |
210 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||| |||| | | ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12235 |
tcgcaaggaatcaaatttttggaagggaatcatgtagtcatatctgaattttttatcaaagagacttatatggtgaactctaattgacaa |
12324 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0133; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 210 - 451
Target Start/End: Original strand, 17775 - 18016
Alignment:
| Q |
210 |
atttcaaaatccttaggaaaaacagcacagaaggtaaaacatggccttaataacaatttcaagttgaagtagcttagtctcaaagcagacatgataggat |
309 |
Q |
| |
|
||||||||||||||||||||||||| ||| || |||||||| ||||| || || ||||||| || |||||||||||||||||||||||||| ||||| | |
|
|
| T |
17775 |
atttcaaaatccttaggaaaaacagtacaaaaagtaaaacagggcctcaaggacgatttcaaattaaagtagcttagtctcaaagcagacattatagggt |
17874 |
T |
|
| Q |
310 |
catcctcaggtaaattccaaaactcactttccagtacagaaatccattgatgttcgtcagtttcacattgcaaactgcttcccaatactttagcagcaag |
409 |
Q |
| |
|
|||||||| ||||||||||| |||||||||| |||||||| |||||||||||| ||| ||| | | ||| | ||||||||| || || |||||||| |
|
|
| T |
17875 |
tatcctcagataaattccaaacctcactttcctttacagaaagccattgatgttcctcacttttaaagcgcagaaggcttcccaaaaccttggcagcaag |
17974 |
T |
|
| Q |
410 |
aggtgaacccacaaattttctcaccaacttcttacctattgc |
451 |
Q |
| |
|
|||||||||||| |||||||||| | || |||||||||||| |
|
|
| T |
17975 |
aggtgaacccacgcattttctcactatctccttacctattgc |
18016 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0133; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 19 - 172
Target Start/End: Original strand, 7764 - 7917
Alignment:
| Q |
19 |
caatgatgagagttgatgagaacttgtatgtaaagctcgaagaggagtttttgatagtaacacatttaaattcttggagggtggtttatactcaagaaag |
118 |
Q |
| |
|
|||| ||||||||| || |||| |||| | ||| ||||||||| || |||| || ||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
7764 |
caataatgagagttcatttgaacgtgtaagcaaaactcgaagagaggtgcttgacagaaacacatctaaattcttggagggtggtttatactcaagaaag |
7863 |
T |
|
| Q |
119 |
gttcgcaaggaatcaaatttttggtagggaatcatgtaatcatgttttgatttt |
172 |
Q |
| |
|
|||||||||||||||| ||||||| ||||||| |||| |||| |||||||||| |
|
|
| T |
7864 |
gttcgcaaggaatcaactttttggaagggaattatgtggtcatattttgatttt |
7917 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 131; Significance: 9e-68; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 210 - 464
Target Start/End: Complemental strand, 38939800 - 38939546
Alignment:
| Q |
210 |
atttcaaaatccttaggaaaaacagcacagaaggtaaaacatggccttaataacaatttcaagttgaagtagcttagtctcaaagcagacatgataggat |
309 |
Q |
| |
|
||||||||||||||||||||||||||||| || ||||||||||||| || |||||||||| || |||||||||||||||||||||||||||||||| | |
|
|
| T |
38939800 |
atttcaaaatccttaggaaaaacagcacaaaaattaaaacatggcctcaaggacaatttcaaattaaagtagcttagtctcaaagcagacatgatagggt |
38939701 |
T |
|
| Q |
310 |
catcctcaggtaaattccaaaactcactttccagtacagaaatccattgatgttcgtcagtttcacattgcaaactgcttcccaatactttagcagcaag |
409 |
Q |
| |
|
|||||||| ||||||||||| |||||||||| |||||||| |||||||||||| ||| ||| | | ||||| ||||||||||||||| |||||||| |
|
|
| T |
38939700 |
tatcctcagataaattccaaagctcactttcctttacagaaaaccattgatgttcctcacttttaaagcgcaaaaggcttcccaatactttggcagcaag |
38939601 |
T |
|
| Q |
410 |
aggtgaacccacaaattttctcaccaacttcttacctattgccacaacctctgca |
464 |
Q |
| |
|
||||||||||||| |||||||||| | || ||| |||||||| |||| ||||||| |
|
|
| T |
38939600 |
aggtgaacccacacattttctcactatctccttgcctattgctacaagctctgca |
38939546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 213 - 450
Target Start/End: Complemental strand, 7053704 - 7053467
Alignment:
| Q |
213 |
tcaaaatccttaggaaaaacagcacagaaggtaaaacatggccttaataacaatttcaagttgaagtagcttagtctcaaagcagacatgataggatcat |
312 |
Q |
| |
|
|||||||| || |||||||||||||| || | |||||| ||||| ||| ||||||||| || ||||||| || ||||||||||||||||| |||| || |
|
|
| T |
7053704 |
tcaaaatctttgggaaaaacagcacaaaaagaaaaacaaggcctcaatggcaatttcaaattatagtagctcagcctcaaagcagacatgattggattat |
7053605 |
T |
|
| Q |
313 |
cctcaggtaaattccaaaactcactttccagtacagaaatccattgatgttcgtcagtttcacattgcaaactgcttcccaatactttagcagcaagagg |
412 |
Q |
| |
|
|||||| |||||||||||||| |||||| || ||||| ||||||||||| ||| || | || | ||| |||||| |||||||| || |||||||| |
|
|
| T |
7053604 |
cctcagataaattccaaaacttgctttcctttatagaaagccattgatgtttctcacgtttaaatcgtaaaaggcttcctaatacttttgctgcaagagg |
7053505 |
T |
|
| Q |
413 |
tgaacccacaaattttctcaccaacttcttacctattg |
450 |
Q |
| |
|
|||||||||| |||||||||| | || ||| ||||||| |
|
|
| T |
7053504 |
tgaacccacacattttctcactatctccttgcctattg |
7053467 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 210
Target Start/End: Complemental strand, 7054088 - 7053952
Alignment:
| Q |
77 |
aacacatttaaattcttggagggtggtttatactcaagaaaggttcgcaaggaatcaaatttttggtagggaatca---tgtaatcatgttttgattttt |
173 |
Q |
| |
|
||||||| ||| || |||| || |||| || |||||||||||||||||||||| |||| ||| | | ||||||||| |||| ||| | ||| ||| |
|
|
| T |
7054088 |
aacacatctaattttttggtggatggtctaaactcaagaaaggttcgcaaggattcaattttattgaagggaatcattttgtagtcaagcttttctttac |
7053989 |
T |
|
| Q |
174 |
tatcaaagagacttatatggtgaactctaattgacaa |
210 |
Q |
| |
|
| || | || ||||||||||||||||||||||||||| |
|
|
| T |
7053988 |
tgtctatgaaacttatatggtgaactctaattgacaa |
7053952 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0144 (Bit Score: 129; Significance: 1e-66; HSPs: 2)
Name: scaffold0144
Description:
Target: scaffold0144; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 210 - 466
Target Start/End: Original strand, 37210 - 37466
Alignment:
| Q |
210 |
atttcaaaatccttaggaaaaacagcacagaaggtaaaacatggccttaataacaatttcaagttgaagtagcttagtctcaaagcagacatgataggat |
309 |
Q |
| |
|
|||| |||||||||||||||||||||||| || |||||||||||||| ||| ||||||||||||| |||||||| ||||||||||||||||||| | | |
|
|
| T |
37210 |
attttaaaatccttaggaaaaacagcacaaaaagtaaaacatggcctcaatgacaatttcaagttaaagtagctcagtctcaaagcagacatgacttggt |
37309 |
T |
|
| Q |
310 |
catcctcaggtaaattccaaaactcactttccagtacagaaatccattgatgttcgtcagtttcacattgcaaactgcttcccaatactttagcagcaag |
409 |
Q |
| |
|
||| |||| ||||||||||||||||||||||| |||||||||||||||||||| || ||| | | ||||| |||||||||||||||||||||||| |
|
|
| T |
37310 |
tatcatcagctaaattccaaaactcactttccaccacagaaatccattgatgttcatcgcttttaaagcgcaaaaggcttcccaatactttagcagcaag |
37409 |
T |
|
| Q |
410 |
aggtgaacccacaaattttctcaccaacttcttacctattgccacaacctctgcacg |
466 |
Q |
| |
|
||||||||||||| |||||||||| ||||| | |||||| |||||| ||||||||| |
|
|
| T |
37410 |
aggtgaacccacacattttctcactaacttttggcctatttccacaagctctgcacg |
37466 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0144; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 19 - 206
Target Start/End: Original strand, 36774 - 36961
Alignment:
| Q |
19 |
caatgatgagagttgatgagaacttgtatgtaaagctcgaagaggagtttttgatagtaacacatttaaattcttggagggtggtttatactcaagaaag |
118 |
Q |
| |
|
|||||| |||||||||| |||||| ||| |||||||||| |||||||| ||||||| ||| ||| |||||||||| | ||| | |||||||||| || |
|
|
| T |
36774 |
caatgacgagagttgataagaactggtacgtaaagctcggagaggagtgcttgatagcaacgcatctaaattcttgcaaggtcgcgtatactcaaggaaa |
36873 |
T |
|
| Q |
119 |
gttcgcaaggaatcaaatttttggtagggaatcatgtaatcatgttttgattttttatcaaagagacttatatggtgaactctaattg |
206 |
Q |
| |
|
|||||||||||||||| |||||| ||||||||||||| |||| ||||||||| |||||||| || || ||||||||||||||||||| |
|
|
| T |
36874 |
gttcgcaaggaatcaacattttggaagggaatcatgtagtcatcttttgatttgttatcaaacagcctgatatggtgaactctaattg |
36961 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 117; Significance: 2e-59; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 210 - 466
Target Start/End: Original strand, 13377811 - 13378067
Alignment:
| Q |
210 |
atttcaaaatccttaggaaaaacagcacagaaggtaaaacatggccttaataacaatttcaagttgaagtagcttagtctcaaagcagacatgataggat |
309 |
Q |
| |
|
||||||||||||||||||||||||||||| || |||||||||||||| || |||||||||| || |||||||||||||||||||||||||||||||| | |
|
|
| T |
13377811 |
atttcaaaatccttaggaaaaacagcacaaaaagtaaaacatggcctcaaggacaatttcaaattaaagtagcttagtctcaaagcagacatgatagggt |
13377910 |
T |
|
| Q |
310 |
catcctcaggtaaattccaaaactcactttccagtacagaaatccattgatgttcgtcagtttcacattgcaaactgcttcccaatactttagcagcaag |
409 |
Q |
| |
|
|||||||| ||||||||||| || ||||||| |||||||| |||||||||||| ||| ||| | | || || ||||||||| || || |||||||| |
|
|
| T |
13377911 |
tatcctcagataaattccaaagcttactttcctttacagaaagccattgatgttcctcacttttaaagcgcgaaaggcttcccaaaaccttggcagcaag |
13378010 |
T |
|
| Q |
410 |
aggtgaacccacaaattttctcaccaacttcttacctattgccacaacctctgcacg |
466 |
Q |
| |
|
||||||||||||| |||||||||| | || ||| |||||||| ||| ||||||||| |
|
|
| T |
13378011 |
aggtgaacccacacattttctcactatctccttgcctattgctgcaagctctgcacg |
13378067 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 25 - 140
Target Start/End: Original strand, 13377379 - 13377494
Alignment:
| Q |
25 |
tgagagttgatgagaacttgtatgtaaagctcgaagaggagtttttgatagtaacacatttaaattcttggagggtggtttatactcaagaaaggttcgc |
124 |
Q |
| |
|
|||||||||| |||||||||| |||||||||| |||||||| ||||| | |||| || |||| | ||| |||||||||| ||||||||||||||||| |
|
|
| T |
13377379 |
tgagagttgaaaagaacttgtacgtaaagctcggagaggagtgattgatggaaacaaatctaaaattttgcagggtggtttgaactcaagaaaggttcgc |
13377478 |
T |
|
| Q |
125 |
aaggaatcaaattttt |
140 |
Q |
| |
|
||||| |||| ||||| |
|
|
| T |
13377479 |
aaggattcaacttttt |
13377494 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0256 (Bit Score: 109; Significance: 1e-54; HSPs: 1)
Name: scaffold0256
Description:
Target: scaffold0256; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 210 - 450
Target Start/End: Original strand, 8871 - 9111
Alignment:
| Q |
210 |
atttcaaaatccttaggaaaaacagcacagaaggtaaaacatggccttaataacaatttcaagttgaagtagcttagtctcaaagcagacatgataggat |
309 |
Q |
| |
|
|||| |||||| ||||||||||||||||| || ||||||||||| || || |||||||||| || |||||||||||||||||||||||||||||||||| |
|
|
| T |
8871 |
attttaaaatctttaggaaaaacagcacaaaaagtaaaacatggtctcaaggacaatttcaaattaaagtagcttagtctcaaagcagacatgataggat |
8970 |
T |
|
| Q |
310 |
catcctcaggtaaattccaaaactcactttccagtacagaaatccattgatgttcgtcagtttcacattgcaaactgcttcccaatactttagcagcaag |
409 |
Q |
| |
|
||||||||| ||||||||||| |||||||||| ||||| | |||||||||||| ||| ||| | | |||| |||||||||||||| |||||||| |
|
|
| T |
8971 |
catcctcagttaaattccaaagctcactttccttgacagagagccattgatgttcctcacttttaaagcacaaaagacttcccaatactttggcagcaag |
9070 |
T |
|
| Q |
410 |
aggtgaacccacaaattttctcaccaacttcttacctattg |
450 |
Q |
| |
|
||||||||||||| |||||||||| | || ||| ||||||| |
|
|
| T |
9071 |
aggtgaacccacacattttctcacaatctccttgcctattg |
9111 |
T |
|
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Target: scaffold0511 (Bit Score: 89; Significance: 1e-42; HSPs: 1)
Name: scaffold0511
Description:
Target: scaffold0511; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 210 - 466
Target Start/End: Original strand, 9073 - 9329
Alignment:
| Q |
210 |
atttcaaaatccttaggaaaaacagcacagaaggtaaaacatggccttaataacaatttcaagttgaagtagcttagtctcaaagcagacatgataggat |
309 |
Q |
| |
|
||||||||||||||||||||||| ||||| || |||||||| ||||| | | | |||||||| || |||||||| ||||||||| ||||||||||||||| |
|
|
| T |
9073 |
atttcaaaatccttaggaaaaaccgcacaaaaagtaaaacacggcctcagtgataatttcaaattaaagtagctgagtctcaaaacagacatgataggat |
9172 |
T |
|
| Q |
310 |
catcctcaggtaaattccaaaactcactttccagtacagaaatccattgatgttcgtcagtttcacattgcaaactgcttcccaatactttagcagcaag |
409 |
Q |
| |
|
||||| | ||| ||||||||| ||| ||| |||||||| |||||||||||| ||| ||| | | ||||| ||||| | |||||| || ||||| |
|
|
| T |
9173 |
tgtcctcggataagctccaaaacttactgtcctttacagaaagccattgatgttcctcacttttaaagcgcaaaagacttcctagtactttggcggcaag |
9272 |
T |
|
| Q |
410 |
aggtgaacccacaaattttctcaccaacttcttacctattgccacaacctctgcacg |
466 |
Q |
| |
|
||| ||||||||| |||||||||| |||| ||| ||||||||||||| ||||||||| |
|
|
| T |
9273 |
aggcgaacccacacattttctcactaactccttgcctattgccacaagctctgcacg |
9329 |
T |
|
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Target: scaffold0230 (Bit Score: 86; Significance: 6e-41; HSPs: 1)
Name: scaffold0230
Description:
Target: scaffold0230; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 210 - 466
Target Start/End: Original strand, 4392 - 4649
Alignment:
| Q |
210 |
atttcaaaatccttaggaaaaacagcacagaaggtaaaacatggccttaataacaatttcaagttgaagtagcttagtctcaaagcagacatgataggat |
309 |
Q |
| |
|
||||||||||||||||||||||| ||||| || |||||||| ||||| | | | ||||| || || |||||||| ||||||||| || |||||||||||| |
|
|
| T |
4392 |
atttcaaaatccttaggaaaaaccgcacaaaaagtaaaacacggcctcagtgataattttaaattaaagtagctgagtctcaaaacaaacatgataggat |
4491 |
T |
|
| Q |
310 |
catcctcaggtaaattccaaaactcactttccagtacagaaatccattgatgttcgtcagtttcacattgc-aaactgcttcccaatactttagcagcaa |
408 |
Q |
| |
|
||||| | ||| ||||||||| ||||||| |||||||| |||||||||||| ||| ||| | | || ||| |||||| | |||||| ||||||| |
|
|
| T |
4492 |
tgtcctcggataagctccaaaacttactttcctttacagaaagccattgatgttcctcacttttaaagcgcaaaaaggcttcctagtactttggcagcaa |
4591 |
T |
|
| Q |
409 |
gaggtgaacccacaaattttctcaccaacttcttacctattgccacaacctctgcacg |
466 |
Q |
| |
|
|||| ||||||||| |||||||||| |||| ||| ||||||||||||| ||||||||| |
|
|
| T |
4592 |
gaggcgaacccacacattttctcactaactccttgcctattgccacaagctctgcacg |
4649 |
T |
|
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Target: chr2 (Bit Score: 69; Significance: 9e-31; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 25 - 141
Target Start/End: Original strand, 20153731 - 20153846
Alignment:
| Q |
25 |
tgagagttgatgagaacttgtatgtaaagctcgaagaggagtttttgatagtaacacatttaaattcttggagggtggtttatactcaagaaaggttcgc |
124 |
Q |
| |
|
|||||||||| || ||||||| |||||||||| |||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
20153731 |
tgagagttgaaaaggacttgtacgtaaagctcggagaggagtgcttgataggaacacatt-aaattcttggagggtggtttatactcaagaaaggtccgc |
20153829 |
T |
|
| Q |
125 |
aaggaatcaaatttttg |
141 |
Q |
| |
|
|||||||||| |||||| |
|
|
| T |
20153830 |
aaggaatcaactttttg |
20153846 |
T |
|
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