View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2219_high_4 (Length: 251)
Name: NF2219_high_4
Description: NF2219
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2219_high_4 |
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Alignment Details
Target: chr4 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 1715368 - 1715127
Alignment:
| Q |
1 |
ctccaatcataaaaactgtttgaaatgacagtgttgtgtgataattactccctattatttctttctacatatcacaatgatagtgtgtaattatcacgaa |
100 |
Q |
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| T |
1715368 |
ctccaatcataaaaactgtttgaaatgacagtgttgtgtgataattactccctattatttctttctacatatcacaatgatagtgtgtaattatcacgaa |
1715269 |
T |
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| Q |
101 |
ttcgagtttgaagtgcctaatggattcaatcctttgtcttaggtttgataatcgggttgtgagtgtttatgacgccatctccaagatttatggcctcagt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
1715268 |
ttcgagtttgaagtgcctaatggattcaatcctttgtcttaggtttgataatcgggttgtgagtgtttatgacgccatctccaaga-ttatggcctcagt |
1715170 |
T |
|
| Q |
201 |
ccctcttactgggactcattacaacaactttatgtcctatgat |
243 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1715169 |
ccctcttactgggactcattacaacaactttatgtcctatgat |
1715127 |
T |
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