View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2220_low_22 (Length: 341)

Name: NF2220_low_22
Description: NF2220
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2220_low_22
NF2220_low_22
[»] chr8 (32 HSPs)
chr8 (22-330)||(5600361-5600669)
chr8 (22-330)||(5639951-5640259)
chr8 (19-211)||(5623689-5623883)
chr8 (278-330)||(9235535-9235587)
chr8 (285-330)||(10761680-10761725)
chr8 (285-330)||(25653776-25653821)
chr8 (220-330)||(13980024-13980135)
chr8 (285-330)||(9662265-9662310)
chr8 (285-330)||(11830434-11830479)
chr8 (285-330)||(12478832-12478877)
chr8 (285-330)||(13558800-13558845)
chr8 (286-323)||(23245746-23245783)
chr8 (293-330)||(32393538-32393575)
chr8 (285-330)||(32684633-32684678)
chr8 (285-330)||(34845355-34845400)
chr8 (285-330)||(41509451-41509496)
chr8 (285-329)||(2873708-2873752)
chr8 (219-267)||(29427007-29427055)
chr8 (285-329)||(34227587-34227631)
chr8 (280-310)||(37871843-37871873)
chr8 (285-330)||(8626772-8626816)
chr8 (285-330)||(9305478-9305523)
chr8 (285-330)||(15935457-15935502)
chr8 (285-330)||(23389279-23389324)
chr8 (293-330)||(29212127-29212164)
chr8 (285-330)||(31974729-31974774)
chr8 (285-330)||(35839612-35839657)
chr8 (285-330)||(38711694-38711739)
chr8 (278-330)||(13572799-13572851)
chr8 (278-314)||(14698097-14698133)
chr8 (278-330)||(23289098-23289150)
chr8 (294-330)||(36637252-36637288)
[»] chr2 (27 HSPs)
chr2 (278-323)||(41906244-41906289)
chr2 (286-330)||(15580627-15580671)
chr2 (285-330)||(15543786-15543831)
chr2 (293-330)||(17188731-17188768)
chr2 (285-330)||(19272921-19272966)
chr2 (285-330)||(38128020-38128065)
chr2 (293-330)||(41100951-41100988)
chr2 (278-327)||(41567315-41567364)
chr2 (285-329)||(9419571-9419615)
chr2 (278-330)||(11915236-11915288)
chr2 (278-330)||(42223273-42223325)
chr2 (287-330)||(16139058-16139101)
chr2 (285-330)||(1975555-1975600)
chr2 (293-330)||(16204388-16204425)
chr2 (285-330)||(18049076-18049121)
chr2 (281-330)||(18155450-18155499)
chr2 (285-330)||(19253646-19253691)
chr2 (285-330)||(22846084-22846129)
chr2 (285-330)||(25293408-25293452)
chr2 (285-330)||(29949322-29949367)
chr2 (293-330)||(30497408-30497445)
chr2 (285-330)||(33218396-33218441)
chr2 (278-330)||(8848908-8848960)
chr2 (278-330)||(11478052-11478104)
chr2 (278-330)||(16590664-16590716)
chr2 (278-330)||(42223089-42223140)
chr2 (210-266)||(42223339-42223394)
[»] chr7 (27 HSPs)
chr7 (278-330)||(1853346-1853398)
chr7 (279-330)||(43393956-43394007)
chr7 (278-330)||(27484820-27484871)
chr7 (278-320)||(3092292-3092334)
chr7 (285-330)||(5864516-5864561)
chr7 (285-330)||(17051887-17051932)
chr7 (285-329)||(21521887-21521931)
chr7 (285-329)||(47370412-47370456)
chr7 (218-266)||(9689223-9689273)
chr7 (287-330)||(21022463-21022506)
chr7 (284-330)||(17052074-17052120)
chr7 (285-322)||(2624475-2624512)
chr7 (293-330)||(8391219-8391256)
chr7 (282-330)||(9689291-9689340)
chr7 (285-330)||(14187696-14187741)
chr7 (286-323)||(14675589-14675626)
chr7 (285-330)||(20164175-20164220)
chr7 (285-330)||(21443937-21443982)
chr7 (278-315)||(25601798-25601835)
chr7 (285-330)||(35158441-35158486)
chr7 (285-330)||(41380645-41380690)
chr7 (285-329)||(442794-442838)
chr7 (278-330)||(2936339-2936391)
chr7 (286-330)||(10394475-10394519)
chr7 (285-329)||(12005335-12005379)
chr7 (298-330)||(22859342-22859374)
chr7 (285-329)||(26254629-26254673)
[»] chr6 (17 HSPs)
chr6 (278-330)||(9044647-9044699)
chr6 (285-330)||(1227935-1227980)
chr6 (285-330)||(2270743-2270788)
chr6 (281-330)||(17158182-17158231)
chr6 (285-330)||(21544389-21544434)
chr6 (285-330)||(22495772-22495817)
chr6 (285-329)||(7321832-7321876)
chr6 (285-328)||(10343744-10343787)
chr6 (285-323)||(9235108-9235146)
chr6 (296-330)||(25167101-25167135)
chr6 (285-330)||(9676293-9676338)
chr6 (285-330)||(16119919-16119964)
chr6 (278-323)||(33200022-33200067)
chr6 (278-330)||(3816704-3816756)
chr6 (285-329)||(18591191-18591235)
chr6 (294-330)||(31174052-31174088)
chr6 (285-329)||(34414342-34414386)
[»] chr1 (17 HSPs)
chr1 (214-330)||(5469540-5469661)
chr1 (285-330)||(19967821-19967866)
chr1 (278-330)||(22315210-22315262)
chr1 (219-330)||(13437065-13437180)
chr1 (285-330)||(21770982-21771027)
chr1 (285-330)||(26190989-26191034)
chr1 (285-330)||(27666175-27666220)
chr1 (285-329)||(44961264-44961308)
chr1 (285-330)||(5932221-5932266)
chr1 (285-330)||(6284249-6284294)
chr1 (278-323)||(9240531-9240576)
chr1 (285-330)||(22387215-22387260)
chr1 (285-330)||(31883719-31883764)
chr1 (293-325)||(3118916-3118948)
chr1 (278-330)||(5469355-5469406)
chr1 (278-330)||(33864115-33864167)
chr1 (278-330)||(33916755-33916807)
[»] chr4 (23 HSPs)
chr4 (218-330)||(8810126-8810242)
chr4 (278-321)||(2032525-2032568)
chr4 (281-323)||(49533131-49533173)
chr4 (285-330)||(3652530-3652575)
chr4 (293-330)||(16589237-16589274)
chr4 (285-330)||(27626926-27626971)
chr4 (285-330)||(29104420-29104465)
chr4 (285-330)||(36395406-36395451)
chr4 (285-330)||(49166903-49166948)
chr4 (285-329)||(18510242-18510286)
chr4 (218-266)||(13555600-13555650)
chr4 (281-320)||(26040649-26040688)
chr4 (285-323)||(24675513-24675551)
chr4 (285-330)||(5514427-5514472)
chr4 (282-330)||(13555668-13555717)
chr4 (281-330)||(40920854-40920903)
chr4 (285-330)||(41325285-41325330)
chr4 (285-330)||(50719850-50719895)
chr4 (278-330)||(5283848-5283900)
chr4 (278-330)||(9780547-9780599)
chr4 (278-330)||(16734299-16734350)
chr4 (278-314)||(23091892-23091928)
chr4 (293-329)||(30919175-30919211)
[»] chr3 (25 HSPs)
chr3 (218-330)||(43426453-43426566)
chr3 (285-330)||(48689331-48689376)
chr3 (285-330)||(300426-300471)
chr3 (285-330)||(13041434-13041479)
chr3 (285-330)||(13049511-13049556)
chr3 (285-330)||(52839370-52839415)
chr3 (278-330)||(7013382-7013434)
chr3 (285-329)||(19111013-19111057)
chr3 (218-330)||(5303698-5303812)
chr3 (278-321)||(14869996-14870039)
chr3 (278-321)||(16895998-16896041)
chr3 (278-321)||(23070058-23070101)
chr3 (285-328)||(28735703-28735746)
chr3 (286-328)||(1347662-1347704)
chr3 (285-323)||(3505072-3505110)
chr3 (218-330)||(55257638-55257756)
chr3 (285-330)||(14004302-14004347)
chr3 (285-330)||(22818141-22818186)
chr3 (278-323)||(25159084-25159129)
chr3 (293-330)||(26770000-26770037)
chr3 (286-327)||(30226172-30226213)
chr3 (285-330)||(38703056-38703101)
chr3 (286-330)||(14154850-14154894)
chr3 (278-330)||(17030593-17030644)
chr3 (278-314)||(17582577-17582613)
[»] scaffold0142 (1 HSPs)
scaffold0142 (278-330)||(34500-34552)
[»] chr5 (23 HSPs)
chr5 (278-330)||(21144023-21144075)
chr5 (283-330)||(23159693-23159740)
chr5 (281-323)||(8861273-8861315)
chr5 (285-327)||(42368666-42368708)
chr5 (287-328)||(4561676-4561717)
chr5 (285-330)||(11721525-11721570)
chr5 (285-330)||(29691217-29691262)
chr5 (281-318)||(35687284-35687321)
chr5 (278-330)||(37869558-37869611)
chr5 (285-330)||(41123215-41123260)
chr5 (278-330)||(13153599-13153651)
chr5 (285-328)||(30916743-30916786)
chr5 (285-330)||(7577826-7577871)
chr5 (285-330)||(10819455-10819500)
chr5 (285-330)||(12147980-12148025)
chr5 (285-330)||(22756135-22756180)
chr5 (293-330)||(25919816-25919853)
chr5 (285-330)||(26243359-26243404)
chr5 (285-330)||(37217377-37217422)
chr5 (293-330)||(38874417-38874454)
chr5 (285-330)||(41185046-41185090)
chr5 (278-330)||(38083062-38083114)
chr5 (285-321)||(43287748-43287784)
[»] scaffold0188 (1 HSPs)
scaffold0188 (278-330)||(13331-13384)
[»] scaffold0022 (1 HSPs)
scaffold0022 (285-330)||(63103-63148)
[»] scaffold0002 (2 HSPs)
scaffold0002 (285-330)||(432467-432512)
scaffold0002 (285-329)||(332324-332368)
[»] scaffold0067 (1 HSPs)
scaffold0067 (216-266)||(25993-26044)
[»] scaffold0121 (1 HSPs)
scaffold0121 (287-329)||(12727-12769)
[»] scaffold1462 (1 HSPs)
scaffold1462 (293-330)||(338-375)
[»] scaffold0154 (1 HSPs)
scaffold0154 (285-330)||(9448-9493)


Alignment Details
Target: chr8 (Bit Score: 245; Significance: 1e-136; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 22 - 330
Target Start/End: Complemental strand, 5600669 - 5600361
Alignment:
Q  22 cttgcattctaatatacaaagattggtaggaatcaacctaaaggctaatgccgaagccggaaacacacgttatggagactcaagggttgtcttcctcgat 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5600669 cttgcattctaatatacaaagattggtaggaatcaacctaaaggctaatgccgaagccggaaacacacgttatggagactcaagggttgtcttcctcgat 5600570  T
Q  122 tttttcattgttctagttgccgcatatttccttaacaacaggttttctaacatgattgtggatataattttatgtagttaaatggcagaataataaaggg 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  5600569 tttttcattgttctagttgccgcatatttccttaacaacaggttttctaacatgaatgtggatataattttatgtagttaaatggcagtataataaaggg 5600470  T
Q  222 ttgatatatgtttaccctataatattagcgatttccggtttaccctatnnnnnnnnttgtttaaatttcaaccttgtaatttgaagattttttgattttg 321  Q
    || ||||||||||||||||||||||||||  ||||||||||| ||| |        ||||||||||||||||||||||||||||||||||||| |||||     
T  5600469 ttaatatatgtttaccctataatattagccgtttccggtttatcctgtaaaaaaaattgtttaaatttcaaccttgtaatttgaagatttttttatttta 5600370  T
Q  322 gatcttcat 330  Q
     ||||||||    
T  5600369 aatcttcat 5600361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 22 - 330
Target Start/End: Original strand, 5639951 - 5640259
Alignment:
Q  22 cttgcattctaatatacaaagattggtaggaatcaacctaaaggctaatgccgaagccggaaacacacgttatggagactcaagggttgtcttcctcgat 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5639951 cttgcattctaatatacaaagattggtaggaatcaacctaaaggctaatgccgaagccggaaacacacgttatggagactcaagggttgtcttcctcgat 5640050  T
Q  122 tttttcattgttctagttgccgcatatttccttaacaacaggttttctaacatgattgtggatataattttatgtagttaaatggcagaataataaaggg 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  5640051 tttttcattgttctagttgccgcatatttccttaacaacaggttttctaacatgaatgtggatataattttatgtagttaaatggcagtataataaaggg 5640150  T
Q  222 ttgatatatgtttaccctataatattagcgatttccggtttaccctatnnnnnnnnttgtttaaatttcaaccttgtaatttgaagattttttgattttg 321  Q
    || ||||||||||||||||||||||||||  ||||||||||| ||| |        ||||||||||||||||||||||||||||||||||||| |||||     
T  5640151 ttaatatatgtttaccctataatattagccgtttccggtttatcctgtaaaaaaaattgtttaaatttcaaccttgtaatttgaagatttttttatttta 5640250  T
Q  322 gatcttcat 330  Q
     ||||||||    
T  5640251 aatcttcat 5640259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 19 - 211
Target Start/End: Original strand, 5623689 - 5623883
Alignment:
Q  19 cttcttgcattctaatatacaaagattggtagg---aatcaacctaaaggctaatgccgaagccggaaacacacgttatggagactcaagggttgtcttc 115  Q
    |||||||||||| |||||||| ||||| |||||   |||| |||||||||||||||||| |||||||||||| || ||||||| ||||||||||||| ||    
T  5623689 cttcttgcattccaatatacatagattagtagggtaaatcgacctaaaggctaatgccgtagccggaaacacgcgctatggagtctcaagggttgtc-tc 5623787  T
Q  116 ctcgattttttcattgttctagttgccgcatatttccttaacaacaggttttctaacatgattgtggatataattttatgtag-ttaaatggcagaa 211  Q
     || ||||||||  ||||||| | ||| |||||||||  |||||||||||||||||||||| | |||||  |||||||||||| |||||||||||||    
T  5623788 atctattttttcgctgttctactagccccatatttcc-caacaacaggttttctaacatgaatatggatccaattttatgtagtttaaatggcagaa 5623883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 278 - 330
Target Start/End: Complemental strand, 9235587 - 9235535
Alignment:
Q  278 ttgtttaaatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||| ||||||    
T  9235587 ttgtttagatttcaaccctgtaatttgaagattttttgattttggaccttcat 9235535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 285 - 330
Target Start/End: Complemental strand, 10761725 - 10761680
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||||    
T  10761725 aatttcatccttgtaatttgaagattttttgattttggaccttcat 10761680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 285 - 330
Target Start/End: Original strand, 25653776 - 25653821
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||||    
T  25653776 aatttcatccttgtaatttgaagattttttgattttggaccttcat 25653821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 220 - 330
Target Start/End: Complemental strand, 13980135 - 13980024
Alignment:
Q  220 ggttgatatatgtttaccc-tataatattagcgatttccggtttaccctatnnnnnnnnttgtttaaatttcaaccttgtaatttgaagattttttgatt 318  Q
    |||| |||||||||||||| | ||||||||| ||||||||||||||||  |        ||||||| |||  |||| ||||||||||||||| |||||||    
T  13980135 ggttaatatatgtttacccctgtaatattagtgatttccggtttaccccttaaaaaaaattgtttagattctaaccctgtaatttgaagattctttgatt 13980036  T
Q  319 ttggatcttcat 330  Q
    ||||| ||||||    
T  13980035 ttggaccttcat 13980024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 285 - 330
Target Start/End: Original strand, 9662265 - 9662310
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||||||||||||||||||||||| ||||||| ||||||    
T  9662265 aatttcatccttgtaatttgaagattttttggttttggaccttcat 9662310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 285 - 330
Target Start/End: Complemental strand, 11830479 - 11830434
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||||||||||||||||||||||| ||||||| ||||||    
T  11830479 aatttcatccttgtaatttgaagattttttggttttggaccttcat 11830434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 285 - 330
Target Start/End: Complemental strand, 12478877 - 12478832
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||||||||||||||||||||||| ||||||| ||||||    
T  12478877 aatttcatccttgtaatttgaagattttttggttttggaccttcat 12478832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 285 - 330
Target Start/End: Complemental strand, 13558845 - 13558800
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||||||||||||||||||||||| ||||||| ||||||    
T  13558845 aatttcatccttgtaatttgaagattttttggttttggaccttcat 13558800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 323
Target Start/End: Complemental strand, 23245783 - 23245746
Alignment:
Q  286 atttcaaccttgtaatttgaagattttttgattttgga 323  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  23245783 atttcaaccctgtaatttgaagattttttgattttgga 23245746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 293 - 330
Target Start/End: Complemental strand, 32393575 - 32393538
Alignment:
Q  293 ccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  32393575 ccttgtaatttgaagattttttggttttggatcttcat 32393538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 285 - 330
Target Start/End: Original strand, 32684633 - 32684678
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||||||||||||||||||||||| ||||||| ||||||    
T  32684633 aatttcatccttgtaatttgaagattttttggttttggaccttcat 32684678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 285 - 330
Target Start/End: Original strand, 34845355 - 34845400
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||||||||||||||||||||||| ||||||| ||||||    
T  34845355 aatttcatccttgtaatttgaagattttttggttttggaccttcat 34845400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 285 - 330
Target Start/End: Original strand, 41509451 - 41509496
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||||||||||||||||||||||| ||||||| ||||||    
T  41509451 aatttcatccttgtaatttgaagattttttggttttggaccttcat 41509496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 329
Target Start/End: Complemental strand, 2873752 - 2873708
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttca 329  Q
    ||||||| ||||||||||||||||||||||| ||||||| |||||    
T  2873752 aatttcatccttgtaatttgaagattttttggttttggaccttca 2873708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 267
Target Start/End: Original strand, 29427007 - 29427055
Alignment:
Q  219 gggttgatatatgtttaccctataatattagcgatttccggtttaccct 267  Q
    ||||| ||| ||||||||||| ||||||||||||||||| |||||||||    
T  29427007 gggttaatacatgtttaccctgtaatattagcgatttcctgtttaccct 29427055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 329
Target Start/End: Complemental strand, 34227631 - 34227587
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttca 329  Q
    ||||||| ||||||||||||||||||||||| ||||||| |||||    
T  34227631 aatttcatccttgtaatttgaagattttttggttttggaccttca 34227587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 310
Target Start/End: Complemental strand, 37871873 - 37871843
Alignment:
Q  280 gtttaaatttcaaccttgtaatttgaagatt 310  Q
    |||||||||||||||||||||||||||||||    
T  37871873 gtttaaatttcaaccttgtaatttgaagatt 37871843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Complemental strand, 8626816 - 8626772
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| |||||||||||||| |||||||| ||||||||||||||    
T  8626816 aatttcatccttgtaatttgaa-attttttggttttggatcttcat 8626772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Original strand, 9305478 - 9305523
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||||||||||||| ||||||||| ||||||| ||||||    
T  9305478 aatttcatccttgtaatttgatgattttttggttttggaccttcat 9305523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Original strand, 15935457 - 15935502
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| |||||| |||||||||||||||| ||||||| ||||||    
T  15935457 aatttcatccttgtcatttgaagattttttggttttggaccttcat 15935502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Complemental strand, 23389324 - 23389279
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| |||| |||||||||||||||||| ||||||| ||||||    
T  23389324 aatttcatccttataatttgaagattttttggttttggaccttcat 23389279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 330
Target Start/End: Complemental strand, 29212164 - 29212127
Alignment:
Q  293 ccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  29212164 ccttgtaatttgaagattttttggttttggatcctcat 29212127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Original strand, 31974729 - 31974774
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||||||||||| ||||||||||| ||||||| ||||||    
T  31974729 aatttcatccttgtaatttaaagattttttggttttggaccttcat 31974774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Complemental strand, 35839657 - 35839612
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||||| ||||||||||||||||| ||||||| ||||||    
T  35839657 aatttcatccttgaaatttgaagattttttggttttggaccttcat 35839612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Original strand, 38711694 - 38711739
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||||||||| ||||||||||||| ||||||| ||||||    
T  38711694 aatttcatccttgtaatatgaagattttttggttttggaccttcat 38711739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 330
Target Start/End: Complemental strand, 13572851 - 13572799
Alignment:
Q  278 ttgtttaaatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    |||||||| ||||  ||||||||||||||||||||||| |||| || ||||||    
T  13572851 ttgtttaattttcgtccttgtaatttgaagattttttggttttagaccttcat 13572799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 314
Target Start/End: Original strand, 14698097 - 14698133
Alignment:
Q  278 ttgtttaaatttcaaccttgtaatttgaagatttttt 314  Q
    ||||||||||| ||| |||||||||||||||||||||    
T  14698097 ttgtttaaattccaatcttgtaatttgaagatttttt 14698133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 330
Target Start/End: Complemental strand, 23289150 - 23289098
Alignment:
Q  278 ttgtttaaatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||| ||||| ||||||||||||||||||| | |||||| ||||||    
T  23289150 ttgtttagattccaaccctgtaatttgaagattttttaactttggaccttcat 23289098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 330
Target Start/End: Complemental strand, 36637288 - 36637252
Alignment:
Q  294 cttgtaatttgaagattttttgattttggatcttcat 330  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  36637288 cttgtaatatgaagattttttgattttggaccttcat 36637252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 278 - 323
Target Start/End: Complemental strand, 41906289 - 41906244
Alignment:
Q  278 ttgtttaaatttcaaccttgtaatttgaagattttttgattttgga 323  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||    
T  41906289 ttgtttaaatttcaaccttgtaatttgaagatttttttattttgga 41906244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 286 - 330
Target Start/End: Complemental strand, 15580671 - 15580627
Alignment:
Q  286 atttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||    
T  15580671 atttcaatcttgtaatttgaagattttttgattttggaccttcat 15580627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 285 - 330
Target Start/End: Original strand, 15543786 - 15543831
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||||||||||||||||||||||| ||||||| ||||||    
T  15543786 aatttcatccttgtaatttgaagattttttggttttggaccttcat 15543831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 293 - 330
Target Start/End: Original strand, 17188731 - 17188768
Alignment:
Q  293 ccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  17188731 ccttgtaatttgaagattttttgattttggaccttcat 17188768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 285 - 330
Target Start/End: Complemental strand, 19272966 - 19272921
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||||||||||||||||||||||| ||||||| ||||||    
T  19272966 aatttcatccttgtaatttgaagattttttggttttggaccttcat 19272921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 285 - 330
Target Start/End: Complemental strand, 38128065 - 38128020
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||||||||||||||||||||||| ||||||| ||||||    
T  38128065 aatttcatccttgtaatttgaagattttttggttttggaccttcat 38128020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 293 - 330
Target Start/End: Complemental strand, 41100988 - 41100951
Alignment:
Q  293 ccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  41100988 ccttgtaatttgaagattttttggttttggatcttcat 41100951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 278 - 327
Target Start/End: Original strand, 41567315 - 41567364
Alignment:
Q  278 ttgtttaaatttcaaccttgtaatttgaagattttttgattttggatctt 327  Q
    ||||||| ||||||||||||||||||||| ||| || |||||||||||||    
T  41567315 ttgtttagatttcaaccttgtaatttgaaaattattcgattttggatctt 41567364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 329
Target Start/End: Original strand, 9419571 - 9419615
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttca 329  Q
    ||||||| ||||||||||||||||||||||| ||||||| |||||    
T  9419571 aatttcatccttgtaatttgaagattttttggttttggaccttca 9419615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 278 - 330
Target Start/End: Complemental strand, 11915288 - 11915236
Alignment:
Q  278 ttgtttaaatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||||||||||||  | |||||||||||||||||| ||||||| ||||||    
T  11915288 ttgtttaaatttcaactctataatttgaagattttttggttttggaccttcat 11915236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 278 - 330
Target Start/End: Complemental strand, 42223325 - 42223273
Alignment:
Q  278 ttgtttaaatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||| ||||| |||||||||||||||||||||||||| | ||||||    
T  42223325 ttgtttagattccaaccctgtaatttgaagattttttgattttgaaccttcat 42223273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 287 - 330
Target Start/End: Complemental strand, 16139101 - 16139058
Alignment:
Q  287 tttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||| ||||||||||||||||||||||| ||||||| ||||||    
T  16139101 tttcatccttgtaatttgaagattttttggttttggaccttcat 16139058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Original strand, 1975555 - 1975600
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||||||||| ||||||||||||| ||||||| ||||||    
T  1975555 aatttcatccttgtaatatgaagattttttggttttggaccttcat 1975600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 330
Target Start/End: Original strand, 16204388 - 16204425
Alignment:
Q  293 ccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  16204388 ccttgtaatttgaagattttttggttttggaccttcat 16204425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Complemental strand, 18049121 - 18049076
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||||||||| ||||||||||||| ||||||| ||||||    
T  18049121 aatttcatccttgtaatatgaagattttttggttttggaccttcat 18049076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 330
Target Start/End: Complemental strand, 18155499 - 18155450
Alignment:
Q  281 tttaaatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||||| |||||||||||| ||||||| |||| ||||||| ||||||    
T  18155499 tttaaattttaaccttgtaattcgaagattctttggttttggaccttcat 18155450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Complemental strand, 19253691 - 19253646
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||||||||||| ||||||||||| ||||||| ||||||    
T  19253691 aatttcatccttgtaatttaaagattttttggttttggaccttcat 19253646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Original strand, 22846084 - 22846129
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| |||||||||||||| |||||||| ||||||| ||||||    
T  22846084 aatttcatccttgtaatttgaatattttttggttttggaccttcat 22846129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Original strand, 25293408 - 25293452
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| |||||||||||||||| |||||||||||||| ||||||    
T  25293408 aatttcatccttgtaatttgaaga-tttttgattttggaccttcat 25293452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Original strand, 29949322 - 29949367
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||||| ||||||||||||||||| || |||||||||||    
T  29949322 aatttcatccttgaaatttgaagattttttggttctggatcttcat 29949367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 330
Target Start/End: Complemental strand, 30497445 - 30497408
Alignment:
Q  293 ccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  30497445 ccttgtaatttgaagattttttggttttggaccttcat 30497408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Original strand, 33218396 - 33218441
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||||| ||||||||||||||||| ||||||| ||||||    
T  33218396 aatttcatccttgaaatttgaagattttttggttttggaccttcat 33218441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 330
Target Start/End: Original strand, 8848908 - 8848960
Alignment:
Q  278 ttgtttaaatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| |||||| ||||||||||| |||||| ||||||||| ||| |||||    
T  8848908 ttgtttagatttcacccttgtaatttaaagattctttgattttagatattcat 8848960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 330
Target Start/End: Original strand, 11478052 - 11478104
Alignment:
Q  278 ttgtttaaatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||||||||| ||||||||||| ||| |||| ||||||| ||||||    
T  11478052 ttgtttagatttcaaccctgtaatttgaaaattctttggttttggaccttcat 11478104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 330
Target Start/End: Complemental strand, 16590716 - 16590664
Alignment:
Q  278 ttgtttaaatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||||||| | ||||||||||||||| |||| ||||||| ||||||    
T  16590716 ttgtttatatttcaaacctgtaatttgaagattatttggttttggaccttcat 16590664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 330
Target Start/End: Original strand, 42223089 - 42223140
Alignment:
Q  278 ttgtttaaatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||||||||| |||||||||||||  ||||| ||||||||||||||    
T  42223089 ttgtttagatttcaaccctgtaatttgaaga-attttggttttggatcttcat 42223140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 266
Target Start/End: Complemental strand, 42223394 - 42223339
Alignment:
Q  210 aataataaagggttgatatatgtttaccctataatattagcgatttccggtttaccc 266  Q
    ||||| |||||||| ||||||||||||  | ||||||||| ||||||||||||||||    
T  42223394 aataaaaaagggttaatatatgtttaca-tgtaatattagtgatttccggtttaccc 42223339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 278 - 330
Target Start/End: Complemental strand, 1853398 - 1853346
Alignment:
Q  278 ttgtttaaatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||| ||||||    
T  1853398 ttgtttagattccaaccttgtaatttgaagattttttgattttggaccttcat 1853346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 279 - 330
Target Start/End: Complemental strand, 43394007 - 43393956
Alignment:
Q  279 tgtttaaatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    |||||||||||||||| ||||||||||||||||||| |||||||| ||||||    
T  43394007 tgtttaaatttcaaccctgtaatttgaagatttttttattttggaccttcat 43393956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 278 - 330
Target Start/End: Original strand, 27484820 - 27484871
Alignment:
Q  278 ttgtttaaatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||||||||| ||||||||||||| |||||||||||||||||||||    
T  27484820 ttgtttagatttcaaccatgtaatttgaaga-tttttgattttggatcttcat 27484871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 320
Target Start/End: Original strand, 3092292 - 3092334
Alignment:
Q  278 ttgtttaaatttcaaccttgtaatttgaagattttttgatttt 320  Q
    ||||||| |||||||||||||||||| ||||||||||||||||    
T  3092292 ttgtttagatttcaaccttgtaatttaaagattttttgatttt 3092334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 285 - 330
Target Start/End: Original strand, 5864516 - 5864561
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||||||||||||||||||||||| |||||| |||||||    
T  5864516 aatttcatccttgtaatttgaagattttttggttttggttcttcat 5864561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 285 - 330
Target Start/End: Original strand, 17051887 - 17051932
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| |||||||||||||| |||||||||||||||| ||||||    
T  17051887 aatttcatccttgtaatttgaatattttttgattttggaccttcat 17051932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 329
Target Start/End: Original strand, 21521887 - 21521931
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttca 329  Q
    ||||||| ||||||||||||||||||||||| ||||||| |||||    
T  21521887 aatttcatccttgtaatttgaagattttttggttttggaccttca 21521931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 329
Target Start/End: Complemental strand, 47370456 - 47370412
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttca 329  Q
    ||||||| ||||||||||| ||||||||||||||||||| |||||    
T  47370456 aatttcatccttgtaatttaaagattttttgattttggaccttca 47370412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 218 - 266
Target Start/End: Original strand, 9689223 - 9689273
Alignment:
Q  218 agggttgatatatgtttaccctat--aatattagcgatttccggtttaccc 266  Q
    |||||| ||||||||||||||| |  |||||||||||||||||||||||||    
T  9689223 agggttaatatatgtttaccctctgtaatattagcgatttccggtttaccc 9689273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 287 - 330
Target Start/End: Original strand, 21022463 - 21022506
Alignment:
Q  287 tttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||| ||||||||||||||||||||||| ||||||| ||||||    
T  21022463 tttcatccttgtaatttgaagattttttggttttggaccttcat 21022506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 330
Target Start/End: Complemental strand, 17052120 - 17052074
Alignment:
Q  284 aaatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    |||||||| ||||||||||||||||||||||  ||||||| ||||||    
T  17052120 aaatttcatccttgtaatttgaagatttttttgttttggaccttcat 17052074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 322
Target Start/End: Original strand, 2624475 - 2624512
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttgg 322  Q
    ||||||| ||||||||||||||||||||||| ||||||    
T  2624475 aatttcatccttgtaatttgaagattttttggttttgg 2624512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 330
Target Start/End: Complemental strand, 8391256 - 8391219
Alignment:
Q  293 ccttgtaatttgaagattttttgattttggatcttcat 330  Q
    |||| |||||||||||||||||| ||||||||||||||    
T  8391256 ccttataatttgaagattttttggttttggatcttcat 8391219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 330
Target Start/End: Original strand, 9689291 - 9689340
Alignment:
Q  282 ttaaatttcaaccttgtaatttgaaga-ttttttgattttggatcttcat 330  Q
    ||| ||||||||| ||||||||||||| ||||||||||||||| ||||||    
T  9689291 ttagatttcaaccctgtaatttgaagatttttttgattttggaccttcat 9689340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Original strand, 14187696 - 14187741
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||||||||| ||||||||||||| ||||||| ||||||    
T  14187696 aatttcatccttgtaatatgaagattttttggttttggaccttcat 14187741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 323
Target Start/End: Original strand, 14675589 - 14675626
Alignment:
Q  286 atttcaaccttgtaatttgaagattttttgattttgga 323  Q
    |||||||| |||||||||||||||| ||||||||||||    
T  14675589 atttcaacattgtaatttgaagattctttgattttgga 14675626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Original strand, 20164175 - 20164220
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||||||||| ||||||||||||| ||||||| ||||||    
T  20164175 aatttcatccttgtaatatgaagattttttggttttggaccttcat 20164220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Original strand, 21443937 - 21443982
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||||| ||||||||||||||||| ||||||| ||||||    
T  21443937 aatttcatccttgaaatttgaagattttttggttttggaccttcat 21443982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 315
Target Start/End: Original strand, 25601798 - 25601835
Alignment:
Q  278 ttgtttaaatttcaaccttgtaatttgaagattttttg 315  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  25601798 ttgtttagattccaaccttgtaatttgaagattttttg 25601835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Complemental strand, 35158486 - 35158441
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| | ||||||||||||||||||||| ||||||| ||||||    
T  35158486 aatttcatctttgtaatttgaagattttttggttttggaccttcat 35158441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Complemental strand, 41380690 - 41380645
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||||||||||||||||||||||| ||||| | ||||||    
T  41380690 aatttcatccttgtaatttgaagattttttgcttttgaaccttcat 41380645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 329
Target Start/End: Complemental strand, 442838 - 442794
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttca 329  Q
    ||||||| ||||||||||| ||||||||||| ||||||| |||||    
T  442838 aatttcatccttgtaatttaaagattttttggttttggaccttca 442794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 330
Target Start/End: Complemental strand, 2936391 - 2936339
Alignment:
Q  278 ttgtttaaatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||||||||| ||||||||||||||| |||| |||| || ||||||    
T  2936391 ttgtttagatttcaaccatgtaatttgaagattctttggttttcgaccttcat 2936339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 330
Target Start/End: Original strand, 10394475 - 10394519
Alignment:
Q  286 atttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    |||||||| |||||||||||||||| |||| ||||| ||||||||    
T  10394475 atttcaactttgtaatttgaagattctttggttttgtatcttcat 10394519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 329
Target Start/End: Original strand, 12005335 - 12005379
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttca 329  Q
    ||||||| ||||||||||| ||||||||||| ||||||| |||||    
T  12005335 aatttcatccttgtaatttaaagattttttggttttggaccttca 12005379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 330
Target Start/End: Original strand, 22859342 - 22859374
Alignment:
Q  298 taatttgaagattttttgattttggatcttcat 330  Q
    |||||||||||||||||| ||||||||||||||    
T  22859342 taatttgaagattttttggttttggatcttcat 22859374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 329
Target Start/End: Original strand, 26254629 - 26254673
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttca 329  Q
    ||||||| |||||||||||||||||||||||  |||||| |||||    
T  26254629 aatttcatccttgtaatttgaagattttttggatttggaccttca 26254673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 278 - 330
Target Start/End: Complemental strand, 9044699 - 9044647
Alignment:
Q  278 ttgtttaaatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||| ||||||    
T  9044699 ttgtttaaattccaaccttgtaatttgaagattatttgattttggaccttcat 9044647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 285 - 330
Target Start/End: Complemental strand, 1227980 - 1227935
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||||||||||||||||||||||| ||||||| ||||||    
T  1227980 aatttcatccttgtaatttgaagattttttggttttggaccttcat 1227935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 285 - 330
Target Start/End: Complemental strand, 2270788 - 2270743
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||||||||||||||||||||||| ||||||| ||||||    
T  2270788 aatttcatccttgtaatttgaagattttttggttttggaccttcat 2270743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 281 - 330
Target Start/End: Original strand, 17158182 - 17158231
Alignment:
Q  281 tttaaatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||||||| ||||||||||||||||||||||| ||||| | ||||||    
T  17158182 tttaaatttcatccttgtaatttgaagattttttggttttgtaccttcat 17158231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 285 - 330
Target Start/End: Complemental strand, 21544434 - 21544389
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||||||||||||||||||||||| ||||||| ||||||    
T  21544434 aatttcatccttgtaatttgaagattttttggttttggaccttcat 21544389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 285 - 330
Target Start/End: Original strand, 22495772 - 22495817
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||||||||||||||||||||||| ||||||| ||||||    
T  22495772 aatttcatccttgtaatttgaagattttttggttttggaccttcat 22495817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 329
Target Start/End: Original strand, 7321832 - 7321876
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttca 329  Q
    ||||||| ||||||||||||||||||||||| ||||||| |||||    
T  7321832 aatttcatccttgtaatttgaagattttttggttttggaccttca 7321876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 328
Target Start/End: Complemental strand, 10343787 - 10343744
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttc 328  Q
    ||||||| ||||||||||||||||||||||| ||||||| ||||    
T  10343787 aatttcatccttgtaatttgaagattttttggttttggaccttc 10343744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 9235146 - 9235108
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttgga 323  Q
    ||||||| ||||||||||||||||||||||| |||||||    
T  9235146 aatttcatccttgtaatttgaagattttttggttttgga 9235108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 330
Target Start/End: Complemental strand, 25167135 - 25167101
Alignment:
Q  296 tgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||||||||||| |||||||||||||||||||    
T  25167135 tgtaatttgaagattatttgattttggatcttcat 25167101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Original strand, 9676293 - 9676338
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| |||| |||||||||||||||||| ||||||| ||||||    
T  9676293 aatttcatccttataatttgaagattttttggttttggaccttcat 9676338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Complemental strand, 16119964 - 16119919
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    |||||||  |||||||||||||||||||||| ||||||| ||||||    
T  16119964 aatttcattcttgtaatttgaagattttttggttttggaccttcat 16119919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 323
Target Start/End: Complemental strand, 33200067 - 33200022
Alignment:
Q  278 ttgtttaaatttcaaccttgtaatttgaagattttttgattttgga 323  Q
    ||||||| ||| ||||| ||||||||||||||| ||||||||||||    
T  33200067 ttgtttagattacaaccctgtaatttgaagattctttgattttgga 33200022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 330
Target Start/End: Complemental strand, 3816756 - 3816704
Alignment:
Q  278 ttgtttaaatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||||||||| ||||||||||||||| |||| |||| || ||||||    
T  3816756 ttgtttagatttcaaccctgtaatttgaagattctttggtttttgaccttcat 3816704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 329
Target Start/End: Original strand, 18591191 - 18591235
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttca 329  Q
    ||||||| | ||||||||||||||||||||| ||||||| |||||    
T  18591191 aatttcatcattgtaatttgaagattttttggttttggaccttca 18591235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 330
Target Start/End: Original strand, 31174052 - 31174088
Alignment:
Q  294 cttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||||||||||||||||||||||| || ||||||    
T  31174052 cttgtaatttgaagattttttgattttagaccttcat 31174088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 329
Target Start/End: Original strand, 34414342 - 34414386
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttca 329  Q
    ||||||| |||||||||||||| |||||||| ||||||| |||||    
T  34414342 aatttcatccttgtaatttgaatattttttggttttggaccttca 34414386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 214 - 330
Target Start/End: Complemental strand, 5469661 - 5469540
Alignment:
Q  214 ataaagggttgatatatgtttacc--ctataatattagcgatttccggtttac---cctatnnnnnnnnttgtttaaatttcaaccttgtaatttgaaga 308  Q
    |||||||||| |||||||||||||  || ||||||||||||||||||||||||   ||| |        ||||||| ||| |||||||||||||||||      
T  5469661 ataaagggttaatatatgtttacctcctttaatattagcgatttccggtttactttcctgtaaaaaaaattgtttagattccaaccttgtaatttgaatt 5469562  T
Q  309 ttttttgattttggatcttcat 330  Q
    ||||||||||||||| ||||||    
T  5469561 ttttttgattttggaccttcat 5469540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 285 - 330
Target Start/End: Complemental strand, 19967866 - 19967821
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||||    
T  19967866 aatttcatccttgtaatttgaagattttttgattttggaccttcat 19967821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 278 - 330
Target Start/End: Original strand, 22315210 - 22315262
Alignment:
Q  278 ttgtttaaatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||| ||||| |||||||||||||||||||||||||||| ||||||    
T  22315210 ttgtttagattccaaccctgtaatttgaagattttttgattttggaccttcat 22315262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 219 - 330
Target Start/End: Complemental strand, 13437180 - 13437065
Alignment:
Q  219 gggttgatatatgtttaccc---tataatattagcgatttccggtttacccta-tnnnnnnnnttgtttaaatttcaaccttgtaatttgaagatttttt 314  Q
    ||||| ||||||||||||||   | ||||||||||||||| |||||||||||  |        ||||||| ||| ||||| |||||||||| ||||||||    
T  13437180 gggttaatatatgtttacccctttgtaatattagcgattttcggtttaccctcgtaaaaaaatttgtttagattccaaccgtgtaatttgatgatttttt 13437081  T
Q  315 gattttggatcttcat 330  Q
    ||||||||| ||||||    
T  13437080 gattttggaccttcat 13437065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 285 - 330
Target Start/End: Complemental strand, 21771027 - 21770982
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||||||||||||||||||||||| ||||||| ||||||    
T  21771027 aatttcatccttgtaatttgaagattttttggttttggaccttcat 21770982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 285 - 330
Target Start/End: Complemental strand, 26191034 - 26190989
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| |||| |||||||||||||||||||||||||| ||||||    
T  26191034 aatttcatccttataatttgaagattttttgattttggaccttcat 26190989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 285 - 330
Target Start/End: Complemental strand, 27666220 - 27666175
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||||||||||||||||||||||| ||||||| ||||||    
T  27666220 aatttcacccttgtaatttgaagattttttggttttggaccttcat 27666175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 329
Target Start/End: Complemental strand, 44961308 - 44961264
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttca 329  Q
    ||||||| ||||||||||||||||||||||| ||||||| |||||    
T  44961308 aatttcatccttgtaatttgaagattttttggttttggaccttca 44961264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Complemental strand, 5932266 - 5932221
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||||||||||| ||||||||||| ||||||| ||||||    
T  5932266 aatttcatccttgtaatttaaagattttttggttttggaccttcat 5932221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Original strand, 6284249 - 6284294
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||||||||| ||||||||||||| ||||||| ||||||    
T  6284249 aatttcatccttgtaatatgaagattttttggttttggaccttcat 6284294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 323
Target Start/End: Original strand, 9240531 - 9240576
Alignment:
Q  278 ttgtttaaatttcaaccttgtaatttgaagattttttgattttgga 323  Q
    ||||||| |||| |||| ||||||||||||||| ||||||||||||    
T  9240531 ttgtttagatttgaaccctgtaatttgaagattctttgattttgga 9240576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Original strand, 22387215 - 22387260
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    |||||||  |||||||||||||||||||||| ||||||| ||||||    
T  22387215 aatttcattcttgtaatttgaagattttttggttttggaccttcat 22387260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Complemental strand, 31883764 - 31883719
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||||||||||| ||||||||||| ||||||| ||||||    
T  31883764 aatttcatccttgtaatttaaagattttttggttttggaccttcat 31883719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 325
Target Start/End: Original strand, 3118916 - 3118948
Alignment:
Q  293 ccttgtaatttgaagattttttgattttggatc 325  Q
    ||||||||||| |||||||||||||||||||||    
T  3118916 ccttgtaatttaaagattttttgattttggatc 3118948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 330
Target Start/End: Original strand, 5469355 - 5469406
Alignment:
Q  278 ttgtttaaatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||| ||||||| |||||||||||||||| | ||||||||||||||    
T  5469355 ttgtttagattccaaccttataatttgaagatttttag-ttttggatcttcat 5469406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 330
Target Start/End: Original strand, 33864115 - 33864167
Alignment:
Q  278 ttgtttaaatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||| ||||| ||||||||||||||| |||| ||||| ||||||||    
T  33864115 ttgtttagattccaaccctgtaatttgaagattctttggttttgaatcttcat 33864167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 330
Target Start/End: Complemental strand, 33916807 - 33916755
Alignment:
Q  278 ttgtttaaatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||| ||||| ||||||||||||||| |||| ||||| ||||||||    
T  33916807 ttgtttagattccaaccctgtaatttgaagattctttggttttgaatcttcat 33916755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000002; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 330
Target Start/End: Complemental strand, 8810242 - 8810126
Alignment:
Q  218 agggttgatatatgttta-ccctataatattagcgatttccggtttac--cctatnnnnnnnn-ttgtttaaatttcaaccttgtaatttgaagattttt 313  Q
    |||||| ||||||||||| |||| ||||||||||||||||||||||||  ||| |         ||||| | ||||||||||||||||||||||||||||    
T  8810242 agggttaatatatgtttatccctgtaatattagcgatttccggtttactccctgtaaaaaaaaattgttaagatttcaaccttgtaatttgaagattttt 8810143  T
Q  314 tgattttggatcttcat 330  Q
    | |||||||| ||||||    
T  8810142 ttattttggaccttcat 8810126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 278 - 321
Target Start/End: Original strand, 2032525 - 2032568
Alignment:
Q  278 ttgtttaaatttcaaccttgtaatttgaagattttttgattttg 321  Q
    |||||| ||||||| |||||||||||||||||||||||||||||    
T  2032525 ttgtttgaatttcatccttgtaatttgaagattttttgattttg 2032568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 323
Target Start/End: Original strand, 49533131 - 49533173
Alignment:
Q  281 tttaaatttcaaccttgtaatttgaagattttttgattttgga 323  Q
    |||| ||||||||||||||||||||||||||||| ||||||||    
T  49533131 tttagatttcaaccttgtaatttgaagattttttcattttgga 49533173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 285 - 330
Target Start/End: Complemental strand, 3652575 - 3652530
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||||||||||||||||||||||| ||||||| ||||||    
T  3652575 aatttcatccttgtaatttgaagattttttggttttggaccttcat 3652530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 293 - 330
Target Start/End: Complemental strand, 16589274 - 16589237
Alignment:
Q  293 ccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  16589274 ccttgtaatttgaagattttttgattttggaccttcat 16589237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 285 - 330
Target Start/End: Complemental strand, 27626971 - 27626926
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||||||||||||||||||||||| ||||||| ||||||    
T  27626971 aatttcatccttgtaatttgaagattttttgcttttggaccttcat 27626926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 285 - 330
Target Start/End: Complemental strand, 29104465 - 29104420
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||||||||||||||||||||||| ||||||| ||||||    
T  29104465 aatttcatccttgtaatttgaagattttttggttttggaccttcat 29104420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 285 - 330
Target Start/End: Original strand, 36395406 - 36395451
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||||||||||||||||||||||| ||||||| ||||||    
T  36395406 aatttcatccttgtaatttgaagattttttggttttggaccttcat 36395451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 285 - 330
Target Start/End: Complemental strand, 49166948 - 49166903
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||||||||||||||||||||||| ||||||| ||||||    
T  49166948 aatttcatccttgtaatttgaagattttttggttttggaccttcat 49166903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 329
Target Start/End: Complemental strand, 18510286 - 18510242
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttca 329  Q
    ||||||| ||||||||||||||||||||||| ||||||| |||||    
T  18510286 aatttcatccttgtaatttgaagattttttggttttggaccttca 18510242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 218 - 266
Target Start/End: Original strand, 13555600 - 13555650
Alignment:
Q  218 agggttgatatatgtttaccctat--aatattagcgatttccggtttaccc 266  Q
    |||||| ||||||||||||||| |  |||||||||||||||||||||||||    
T  13555600 agggttaatatatgtttaccctctgtaatattagcgatttccggtttaccc 13555650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 26040649 - 26040688
Alignment:
Q  281 tttaaatttcaaccttgtaatttgaagattttttgatttt 320  Q
    ||||||||||| ||||||||||||||||||||||| ||||    
T  26040649 tttaaatttcatccttgtaatttgaagattttttggtttt 26040688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 24675551 - 24675513
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttgga 323  Q
    ||||||| ||||||||||||| |||||||||||||||||    
T  24675551 aatttcatccttgtaatttgatgattttttgattttgga 24675513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Original strand, 5514427 - 5514472
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| |||| |||||||||||||||||| ||||||| ||||||    
T  5514427 aatttcatccttttaatttgaagattttttggttttggaccttcat 5514472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 330
Target Start/End: Original strand, 13555668 - 13555717
Alignment:
Q  282 ttaaatttcaaccttgtaatttgaaga-ttttttgattttggatcttcat 330  Q
    ||| ||||||||| ||||||||||||| ||||||||||||||| ||||||    
T  13555668 ttagatttcaaccctgtaatttgaagatttttttgattttggaccttcat 13555717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 330
Target Start/End: Complemental strand, 40920903 - 40920854
Alignment:
Q  281 tttaaatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    |||| ||||||||| ||| |||||||||||||||  ||||||||||||||    
T  40920903 tttagatttcaaccctgttatttgaagattttttacttttggatcttcat 40920854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Original strand, 41325285 - 41325330
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||||||||| ||||||||||||| ||||||| ||||||    
T  41325285 aatttcatccttgtaatatgaagattttttggttttggaccttcat 41325330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Complemental strand, 50719895 - 50719850
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| |||||| |||||||||||||||| ||||||| ||||||    
T  50719895 aatttcatccttgttatttgaagattttttggttttggaccttcat 50719850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 330
Target Start/End: Complemental strand, 5283900 - 5283848
Alignment:
Q  278 ttgtttaaatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||| ||| | |||||||||||||||||||||||||| | ||||||    
T  5283900 ttgtttagattccaatcctgtaatttgaagattttttgattttgaaccttcat 5283848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 330
Target Start/End: Complemental strand, 9780599 - 9780547
Alignment:
Q  278 ttgtttaaatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||| ||||| ||||||||||||||| |||| ||||||| ||||||    
T  9780599 ttgtttagattacaaccatgtaatttgaagattatttggttttggaccttcat 9780547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 330
Target Start/End: Complemental strand, 16734350 - 16734299
Alignment:
Q  278 ttgtttaaatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| |||||||||| |||||||||||||| ||||||||| || ||||||    
T  16734350 ttgtttagatttcaacct-gtaatttgaagattctttgattttagaccttcat 16734299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 314
Target Start/End: Complemental strand, 23091928 - 23091892
Alignment:
Q  278 ttgtttaaatttcaaccttgtaatttgaagatttttt 314  Q
    ||||||| ||| |||||||||||||||||||||||||    
T  23091928 ttgtttagattccaaccttgtaatttgaagatttttt 23091892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 329
Target Start/End: Complemental strand, 30919211 - 30919175
Alignment:
Q  293 ccttgtaatttgaagattttttgattttggatcttca 329  Q
    ||||||||||||||||||||||| ||||||| |||||    
T  30919211 ccttgtaatttgaagattttttggttttggaccttca 30919175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000002; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 330
Target Start/End: Complemental strand, 43426566 - 43426453
Alignment:
Q  218 agggttgatatatgtttacccta-taatattagcgatttccggtttaccctatnnnnnnnnttgtttaaatttcaaccttgtaatttgaagattttttga 316  Q
    |||||| ||||||||||||||   |||||||||||||||| ||||||||| ||        ||||||| |||  |||| |||||||||||||||||||||    
T  43426566 agggttaatatatgtttacccccgtaatattagcgatttctggtttaccccatgtaaaaaattgtttagattcgaaccctgtaatttgaagattttttga 43426467  T
Q  317 ttttggatcttcat 330  Q
    |||| || ||||||    
T  43426466 ttttagaccttcat 43426453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 285 - 330
Target Start/End: Complemental strand, 48689376 - 48689331
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||||    
T  48689376 aatttcatccttgtaatttgaagattttttgattttggaccttcat 48689331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 285 - 330
Target Start/End: Complemental strand, 300471 - 300426
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||||||||||||||||||||||| ||||||| ||||||    
T  300471 aatttcatccttgtaatttgaagattttttggttttggaccttcat 300426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 285 - 330
Target Start/End: Original strand, 13041434 - 13041479
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||||||||||||||||||||||| ||||||| ||||||    
T  13041434 aatttcatccttgtaatttgaagattttttggttttggaccttcat 13041479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 285 - 330
Target Start/End: Original strand, 13049511 - 13049556
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||||||||||||||||||||||| ||||||| ||||||    
T  13049511 aatttcatccttgtaatttgaagattttttggttttggaccttcat 13049556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 285 - 330
Target Start/End: Original strand, 52839370 - 52839415
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||||||||||||||||||||||| ||||||| ||||||    
T  52839370 aatttcatccttgtaatttgaagattttttggttttggaccttcat 52839415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 278 - 330
Target Start/End: Complemental strand, 7013434 - 7013382
Alignment:
Q  278 ttgtttaaatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    |||||||||||||||   ||||||||||||||| |||| ||||||||||||||    
T  7013434 ttgtttaaatttcaattctgtaatttgaagattctttggttttggatcttcat 7013382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 329
Target Start/End: Original strand, 19111013 - 19111057
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttca 329  Q
    ||||||| |||||||||||||||||||||| |||||||| |||||    
T  19111013 aatttcatccttgtaatttgaagatttttttattttggaccttca 19111057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 218 - 330
Target Start/End: Complemental strand, 5303812 - 5303698
Alignment:
Q  218 agggttgatatatgtttaccctataatattagcgatttccggttt--accctatnnnnnnnnttgtttaaatttcaaccttgtaatttgaagattttttg 315  Q
    |||||| ||||||||||||| ||||||||||| ||||| ||||||  ||||| |        ||||||| ||| ||||| ||||||||||||||| ||||    
T  5303812 agggtttatatatgtttaccatataatattagtgattttcggtttacaccctgtaaaaaaatttgtttagattccaaccctgtaatttgaagattctttg 5303713  T
Q  316 attttggatcttcat 330  Q
     |||| || ||||||    
T  5303712 gttttagaccttcat 5303698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 278 - 321
Target Start/End: Original strand, 14869996 - 14870039
Alignment:
Q  278 ttgtttaaatttcaaccttgtaatttgaagattttttgattttg 321  Q
    |||||| ||||||| ||||||||||||||||||||||| |||||    
T  14869996 ttgtttgaatttcatccttgtaatttgaagattttttggttttg 14870039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 278 - 321
Target Start/End: Original strand, 16895998 - 16896041
Alignment:
Q  278 ttgtttaaatttcaaccttgtaatttgaagattttttgattttg 321  Q
    |||||| ||||||| ||||||||||||||||||||||| |||||    
T  16895998 ttgtttgaatttcatccttgtaatttgaagattttttggttttg 16896041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 278 - 321
Target Start/End: Original strand, 23070058 - 23070101
Alignment:
Q  278 ttgtttaaatttcaaccttgtaatttgaagattttttgattttg 321  Q
    ||||||| |||||||||| ||||||| |||||||||||||||||    
T  23070058 ttgtttagatttcaacctagtaatttaaagattttttgattttg 23070101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 328
Target Start/End: Complemental strand, 28735746 - 28735703
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttc 328  Q
    ||||||| ||||||||||||||||||||||| ||||||| ||||    
T  28735746 aatttcatccttgtaatttgaagattttttggttttggaccttc 28735703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 328
Target Start/End: Original strand, 1347662 - 1347704
Alignment:
Q  286 atttcaaccttgtaatttgaagattttttgattttggatcttc 328  Q
    ||||||||||||||||||||| ||| |||||||||||| ||||    
T  1347662 atttcaaccttgtaatttgaatattctttgattttggaccttc 1347704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 3505072 - 3505110
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttgga 323  Q
    ||||||| ||||||||||||||||||||||| |||||||    
T  3505072 aatttcatccttgtaatttgaagattttttggttttgga 3505110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 330
Target Start/End: Original strand, 55257638 - 55257756
Alignment:
Q  218 agggttgatatatgtttaccc----tataatattagcgatttccggtttaccc--tatnnnnnnnnttgtttaaatttcaaccttgtaatttgaagattt 311  Q
    |||||| ||||||||||||||    | ||||||||||||||||||||||||||  | |        ||||||| ||| ||||| | ||||||||||||||    
T  55257638 agggttaatatatgtttaccccccctgtaatattagcgatttccggtttaccccctgtaaaaaaaattgtttagattccaaccctataatttgaagattt 55257737  T
Q  312 tttgattttggatcttcat 330  Q
    ||| |||||||| ||||||    
T  55257738 ttttattttggaccttcat 55257756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Original strand, 14004302 - 14004347
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||||| ||||||||||||||||| ||||||| ||||||    
T  14004302 aatttcatccttgaaatttgaagattttttggttttggaccttcat 14004347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Complemental strand, 22818186 - 22818141
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||||||||||||||||||||||| |||| || ||||||    
T  22818186 aatttcatccttgtaatttgaagattttttggttttagaccttcat 22818141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 323
Target Start/End: Complemental strand, 25159129 - 25159084
Alignment:
Q  278 ttgtttaaatttcaaccttgtaatttgaagattttttgattttgga 323  Q
    ||||||| |||  |||||||||||||||| ||||||||||||||||    
T  25159129 ttgtttagattctaaccttgtaatttgaatattttttgattttgga 25159084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 330
Target Start/End: Original strand, 26770000 - 26770037
Alignment:
Q  293 ccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  26770000 ccttgtaatttgaagattttttgcttttggaccttcat 26770037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 327
Target Start/End: Original strand, 30226172 - 30226213
Alignment:
Q  286 atttcaaccttgtaatttgaagattttttgattttggatctt 327  Q
    |||||| |||||||||||||||||| |||| |||||||||||    
T  30226172 atttcatccttgtaatttgaagattatttggttttggatctt 30226213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Original strand, 38703056 - 38703101
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||||||||||||||||||||||| ||||| | ||||||    
T  38703056 aatttcatccttgtaatttgaagattttttggttttgaaccttcat 38703101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 330
Target Start/End: Original strand, 14154850 - 14154894
Alignment:
Q  286 atttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    |||||| ||||||||||||||||||||||| |||| || ||||||    
T  14154850 atttcatccttgtaatttgaagattttttggttttagaccttcat 14154894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 330
Target Start/End: Original strand, 17030593 - 17030644
Alignment:
Q  278 ttgtttaaatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||| ||||||||||||||||||| |||||| ||||||| ||||||    
T  17030593 ttgtttagattccaaccttgtaatttgaaga-tttttggttttggaccttcat 17030644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 314
Target Start/End: Complemental strand, 17582613 - 17582577
Alignment:
Q  278 ttgtttaaatttcaaccttgtaatttgaagatttttt 314  Q
    |||||||||||  ||||||||||||||||||||||||    
T  17582613 ttgtttaaattcaaaccttgtaatttgaagatttttt 17582577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 278 - 330
Target Start/End: Original strand, 34500 - 34552
Alignment:
Q  278 ttgtttaaatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||||||| |||||||||||||| ||||||||||||| ||||| ||||||    
T  34500 ttgtttaaattccaaccttgtaattttaagattttttgatcttggaccttcat 34552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.000000000008; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 278 - 330
Target Start/End: Original strand, 21144023 - 21144075
Alignment:
Q  278 ttgtttaaatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||| ||||| |||||||||||||||||||||||||||| ||||||    
T  21144023 ttgtttagattccaaccctgtaatttgaagattttttgattttggaccttcat 21144075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 283 - 330
Target Start/End: Complemental strand, 23159740 - 23159693
Alignment:
Q  283 taaatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||||| ||||||||||||||||||||||| ||||||| ||||||    
T  23159740 taaatttcatccttgtaatttgaagattttttggttttggaccttcat 23159693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 323
Target Start/End: Original strand, 8861273 - 8861315
Alignment:
Q  281 tttaaatttcaaccttgtaatttgaagattttttgattttgga 323  Q
    ||||||||||| ||||||||||||||||||||||| |||||||    
T  8861273 tttaaatttcatccttgtaatttgaagattttttggttttgga 8861315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 327
Target Start/End: Complemental strand, 42368708 - 42368666
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatctt 327  Q
    ||||||| ||||||||||||||||||||||| |||||||||||    
T  42368708 aatttcatccttgtaatttgaagattttttggttttggatctt 42368666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 328
Target Start/End: Original strand, 4561676 - 4561717
Alignment:
Q  287 tttcaaccttgtaatttgaagattttttgattttggatcttc 328  Q
    ||||| ||||||||||||||||||||||||||||||| ||||    
T  4561676 tttcatccttgtaatttgaagattttttgattttggaccttc 4561717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 285 - 330
Target Start/End: Complemental strand, 11721570 - 11721525
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||||||||||||||||||||||| ||||||| ||||||    
T  11721570 aatttcatccttgtaatttgaagattttttggttttggaccttcat 11721525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 285 - 330
Target Start/End: Complemental strand, 29691262 - 29691217
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||||||||||||||||||||||| ||||||| ||||||    
T  29691262 aatttcatccttgtaatttgaagattttttggttttggaccttcat 29691217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 281 - 318
Target Start/End: Original strand, 35687284 - 35687321
Alignment:
Q  281 tttaaatttcaaccttgtaatttgaagattttttgatt 318  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  35687284 tttaaatttcatccttgtaatttgaagattttttgatt 35687321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 278 - 330
Target Start/End: Complemental strand, 37869611 - 37869558
Alignment:
Q  278 ttgtttaaatttc-aaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||||| |||||||||||||||||||| |||||||||||| ||||||    
T  37869611 ttgtttagatttccaaccttgtaatttgaagattctttgattttggaccttcat 37869558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 285 - 330
Target Start/End: Original strand, 41123215 - 41123260
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||||||||||||||||||||||| ||||||| ||||||    
T  41123215 aatttcatccttgtaatttgaagattttttggttttggaccttcat 41123260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 278 - 330
Target Start/End: Original strand, 13153599 - 13153651
Alignment:
Q  278 ttgtttaaatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||| |||||||||||||||||||||| || |||||||| ||||||    
T  13153599 ttgtttagattccaaccttgtaatttgaagatttctttattttggaccttcat 13153651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 328
Target Start/End: Complemental strand, 30916786 - 30916743
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttc 328  Q
    ||||||| ||||||||||||||||||||||| ||||||| ||||    
T  30916786 aatttcatccttgtaatttgaagattttttggttttggaccttc 30916743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Original strand, 7577826 - 7577871
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    |||||||  ||| |||||||||||||||||| ||||||||||||||    
T  7577826 aatttcattcttataatttgaagattttttggttttggatcttcat 7577871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Original strand, 10819455 - 10819500
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| | |||||||||||||||||||||||||| || ||||||    
T  10819455 aatttcatctttgtaatttgaagattttttgattttagaccttcat 10819500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Original strand, 12147980 - 12148025
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    |||||||  |||||||||||||||||||||| ||||||| ||||||    
T  12147980 aatttcattcttgtaatttgaagattttttggttttggaccttcat 12148025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Original strand, 22756135 - 22756180
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||||||||||||||||||||||  ||||||| ||||||    
T  22756135 aatttcatccttgtaatttgaagatttttttgttttggaccttcat 22756180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 330
Target Start/End: Complemental strand, 25919853 - 25919816
Alignment:
Q  293 ccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  25919853 ccttgtaatttgaagattttttggttttggaccttcat 25919816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Complemental strand, 26243404 - 26243359
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||||| ||||||||||||||||| ||||||| ||||||    
T  26243404 aatttcatccttgaaatttgaagattttttggttttggaccttcat 26243359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Original strand, 37217377 - 37217422
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||||| ||||||||||||||||| ||||||| ||||||    
T  37217377 aatttcatccttgaaatttgaagattttttggttttggaccttcat 37217422  T

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Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 330
Target Start/End: Original strand, 38874417 - 38874454
Alignment:
Q  293 ccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  38874417 ccttgtaatttgaagattttttggttttggaccttcat 38874454  T

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Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Original strand, 41185046 - 41185090
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||||||||||||| ||||||||||||||||| ||||||    
T  41185046 aatttcatccttgtaatttga-gattttttgattttggaccttcat 41185090  T

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Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 330
Target Start/End: Complemental strand, 38083114 - 38083062
Alignment:
Q  278 ttgtttaaatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||||||||   |||||||||||||| |||||||||||| ||||||    
T  38083114 ttgtttagatttcaacacagtaatttgaagattctttgattttggaccttcat 38083062  T

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Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 321
Target Start/End: Original strand, 43287748 - 43287784
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttg 321  Q
    |||||||||||||||||||||||||| |||| |||||    
T  43287748 aatttcaaccttgtaatttgaagattatttggttttg 43287784  T

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Target: scaffold0188 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 278 - 330
Target Start/End: Complemental strand, 13384 - 13331
Alignment:
Q  278 ttgtttaaatttcaaccttgtaatttgaagatt-ttttgattttggatcttcat 330  Q
    ||||||| ||| ||||||||||||||||||||| ||||||||||||| ||||||    
T  13384 ttgtttagattccaaccttgtaatttgaagatttttttgattttggaccttcat 13331  T

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Target: scaffold0022 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 285 - 330
Target Start/End: Original strand, 63103 - 63148
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||||||||||||||||||||||| ||||||| ||||||    
T  63103 aatttcatccttgtaatttgaagattttttggttttggaccttcat 63148  T

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Target: scaffold0002 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 285 - 330
Target Start/End: Original strand, 432467 - 432512
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||||||||||||||||||||||| ||||||| ||||||    
T  432467 aatttcatccttgtaatttgaagattttttggttttggaccttcat 432512  T

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Target: scaffold0002; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 329
Target Start/End: Complemental strand, 332368 - 332324
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttca 329  Q
    ||||||| ||||||||||||||||||||||| ||||||| |||||    
T  332368 aatttcatccttgtaatttgaagattttttggttttggaccttca 332324  T

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Target: scaffold0067 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 216 - 266
Target Start/End: Complemental strand, 26044 - 25993
Alignment:
Q  216 aaagggttgatatatgtttaccctat-aatattagcgatttccggtttaccc 266  Q
    |||||||| ||||||||||||||  | |||||||||||||||||||||||||    
T  26044 aaagggttaatatatgtttacccccttaatattagcgatttccggtttaccc 25993  T

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Target: scaffold0121 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 329
Target Start/End: Complemental strand, 12769 - 12727
Alignment:
Q  287 tttcaaccttgtaatttgaagattttttgattttggatcttca 329  Q
    ||||| ||||||||||||||||||||||| ||||||| |||||    
T  12769 tttcatccttgtaatttgaagattttttggttttggaccttca 12727  T

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Target: scaffold1462 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1462
Description:

Target: scaffold1462; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 330
Target Start/End: Complemental strand, 375 - 338
Alignment:
Q  293 ccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  375 ccttgtaatttgaagattttttggttttggaccttcat 338  T

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Target: scaffold0154 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Complemental strand, 9493 - 9448
Alignment:
Q  285 aatttcaaccttgtaatttgaagattttttgattttggatcttcat 330  Q
    ||||||| ||||||||||||||||||||||| |||| || ||||||    
T  9493 aatttcatccttgtaatttgaagattttttggtttttgaccttcat 9448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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