View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2220_low_8 (Length: 508)

Name: NF2220_low_8
Description: NF2220
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2220_low_8
NF2220_low_8
[»] chr6 (2 HSPs)
chr6 (19-442)||(20601022-20601445)
chr6 (213-427)||(34767949-34768163)
[»] chr8 (3 HSPs)
chr8 (193-429)||(25816483-25816719)
chr8 (213-483)||(2306709-2306979)
chr8 (213-483)||(2311903-2312173)
[»] scaffold1235 (1 HSPs)
scaffold1235 (228-429)||(207-408)
[»] chr5 (2 HSPs)
chr5 (228-429)||(29738315-29738516)
chr5 (360-421)||(18110938-18110999)
[»] chr4 (1 HSPs)
chr4 (228-429)||(28400725-28400926)
[»] chr3 (1 HSPs)
chr3 (228-429)||(491732-491933)
[»] chr2 (3 HSPs)
chr2 (228-429)||(22992790-22992991)
chr2 (218-432)||(29222490-29222704)
chr2 (218-432)||(29335789-29336003)
[»] chr1 (2 HSPs)
chr1 (228-429)||(8321975-8322176)
chr1 (213-427)||(29459305-29459519)
[»] scaffold0313 (1 HSPs)
scaffold0313 (213-427)||(8362-8576)


Alignment Details
Target: chr6 (Bit Score: 296; Significance: 1e-166; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 19 - 442
Target Start/End: Complemental strand, 20601445 - 20601022
Alignment:
Q  19 ctgttgactcaacttcttcaccttcattttcaattgagatggcctcatctgtattcataaagttctcaccgaggactggttgatcttctatttcctgata 118  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||||  |||| || ||||||||||||||||||||||||||| | ||||||||||    
T  20601445 ctgttaactcaacatcttcaccttcattttcaattgagatggcctcatctacattcgtagagttctcaccgaggactggttgatcttttgtttcctgata 20601346  T
Q  119 gttcacattagttggctcaatagggctgctgtccgtgatacctattggaaaagaaggcatgacaataggtgtaatttcagttagtgattttaatggattt 218  Q
    ||||||||||||||||| | | | | ||||| | ||||||| | | | | |||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  20601345 gttcacattagttggcttatttgtgttgctgccagtgatacatgtagaacaagaaggcataacaataggtgtaatttcagttagagattttaatggattt 20601246  T
Q  219 cttgtgtcaagaaagccatcatgaaatggaaaatggttctcattgaagaccacatgtcttgaaacaaagattcttccgtgagagttcagacatttgtatc 318  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||| ||||| |||||||    
T  20601245 cttgtgtcaagaaagtcatcatgaaatggaaaatggttcacattgaagaccacatgtcttgaaacaaagattcttcgatgagagttgagacacttgtatc 20601146  T
Q  319 ctttgtgagagttgctataccccaagaacacgcacctagtggtatgaaattgtagcttatgttggttatatggtttgagacatggataacaggcacaccc 418  Q
    |||| |||||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20601145 ctttatgagagttactataccctaagaacatgcacctagtggtatgaaattgtagcttatgttggttatatggtttgagacatggataacaggcacaccc 20601046  T
Q  419 aaaaggttttaaggcatcatagtc 442  Q
    ||||||||||||||||||||||||    
T  20601045 aaaaggttttaaggcatcatagtc 20601022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 213 - 427
Target Start/End: Original strand, 34767949 - 34768163
Alignment:
Q  213 ggatttcttgtgtcaagaaagccatcatgaaatggaaaatggttctcattgaagaccacatgtcttgaaacaaagattcttccgtgagagttcagacatt 312  Q
    ||||||||||||||||| || ||||||||||| ||| ||||||||||||||||||| || |||||||| |  || ||||| || || ||||| | |||||    
T  34767949 ggatttcttgtgtcaaggaatccatcatgaaaaggataatggttctcattgaagactacgtgtcttgagatgaaaattctgccatgtgagttgacacatt 34768048  T
Q  313 tgtatcctttgtgagagttgctataccccaagaacacgcacctagtggtatgaaattgtagcttatgttggttatatggtttgagacatggataacaggc 412  Q
    |||| ||||| || |  ||||| || ||||| || || || ||||| || ||||| || ||||| |||| ||| || ||||||||||| || || |||||    
T  34768049 tgtaccctttatgtgcattgctgtatcccaaaaaaacacatctagttgtgtgaaactggagcttgtgtttgttgtaaggtttgagacaagggtagcaggc 34768148  T
Q  413 acacccaaaaggttt 427  Q
    ||| ||||| |||||    
T  34768149 acatccaaatggttt 34768163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 85; Significance: 3e-40; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 193 - 429
Target Start/End: Complemental strand, 25816719 - 25816483
Alignment:
Q  193 tttcagttagtgattttaatggatttcttgtgtcaagaaagccatcatgaaatggaaaatggttctcattgaagaccacatgtcttgaaacaaagattct 292  Q
    |||||||||| | ||| ||||||||||||||||||||||| ||||||||||| |||||||| |  |||||||| || ||||||||||| |  |||| |||    
T  25816719 tttcagttagagttttcaatggatttcttgtgtcaagaaatccatcatgaaagggaaaatgatcttcattgaatactacatgtcttgagatgaagactct 25816620  T
Q  293 tccgtgagagttcagacatttgtatcctttgtgagagttgctataccccaagaacacgcacctagtggtatgaaattgtagcttatgttggttatatggt 392  Q
     || ||||| || | ||| ||||||||||| ||||    |||||| ||||||||||| |||||||| || |||||||| ||||| || |  || ||||||    
T  25816619 cccatgagaattgatacacttgtatcctttatgagcaccgctatatcccaagaacacacacctagttgtgtgaaattgaagcttgtgcttattgtatggt 25816520  T
Q  393 ttgagacatggataacaggcacacccaaaaggtttta 429  Q
    |||||||| |||||||| |||||||||||||| ||||    
T  25816519 ttgagacagggataacaagcacacccaaaaggcttta 25816483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 213 - 483
Target Start/End: Complemental strand, 2306979 - 2306709
Alignment:
Q  213 ggatttcttgtgtcaagaaagccatcatgaaatggaaaatggttctcattgaagaccacatgtcttgaaacaaagattcttccgtgagagttcagacatt 312  Q
    ||||||||| | || ||||| || || || || |||||||| || || |||||||| ||||||||||| ||||| |||||||| || || || | |||||    
T  2306979 ggatttcttatatccagaaaaccttcctggaagggaaaatgattttcgttgaagactacatgtcttgacacaaaaattcttccatgtgaattgacacatt 2306880  T
Q  313 tgtatcctttgtgagagttgctataccccaagaacacgcacctagtggtatgaaattgtagcttatgttggttatatggtttgagacatggataacaggc 412  Q
    |||| |||||||||||  | || ||||| ||||| || || ||||| || |||||||| || || || ||||| ||||||||||| || || || |||||    
T  2306879 tgtagcctttgtgagaactactgtaccctaagaatacacatctagtcgtgtgaaattgaagtttgtgctggttgtatggtttgaggcaagggtagcaggc 2306780  T
Q  413 acacccaaaaggttttaaggcatcatagtcaggttccttctcaaacaataatgagtatgggcttgcatttg 483  Q
    ||| ||||||||||| ||||||   | |||||| || ||||  ||||| |||||||| || ||| ||||||    
T  2306779 acaaccaaaaggtttcaaggcagttttgtcagggtctttcttgaacaacaatgagtagggactttcatttg 2306709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 213 - 483
Target Start/End: Complemental strand, 2312173 - 2311903
Alignment:
Q  213 ggatttcttgtgtcaagaaagccatcatgaaatggaaaatggttctcattgaagaccacatgtcttgaaacaaagattcttccgtgagagttcagacatt 312  Q
    ||||||||| | || ||||| || || || || |||||||| || || |||||||| ||||||||||| ||||| |||||||| || || || | |||||    
T  2312173 ggatttcttatatccagaaaaccttcctggaagggaaaatgattttcgttgaagactacatgtcttgacacaaaaattcttccatgtgaattgacacatt 2312074  T
Q  313 tgtatcctttgtgagagttgctataccccaagaacacgcacctagtggtatgaaattgtagcttatgttggttatatggtttgagacatggataacaggc 412  Q
    |||| |||||||||||  | || ||||| ||||| || || ||||| || |||||||| || || || ||||| ||||||||||| || || || |||||    
T  2312073 tgtagcctttgtgagaactactgtaccctaagaatacacatctagtcgtgtgaaattgaagtttgtgctggttgtatggtttgaggcaagggtagcaggc 2311974  T
Q  413 acacccaaaaggttttaaggcatcatagtcaggttccttctcaaacaataatgagtatgggcttgcatttg 483  Q
    ||| ||||||||||| ||||||   | |||||| || ||||  ||||| |||||||| || ||| ||||||    
T  2311973 acaaccaaaaggtttcaaggcagttttgtcagggtctttcttgaacaacaatgagtagggactttcatttg 2311903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1235 (Bit Score: 74; Significance: 1e-33; HSPs: 1)
Name: scaffold1235
Description:

Target: scaffold1235; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 228 - 429
Target Start/End: Complemental strand, 408 - 207
Alignment:
Q  228 agaaagccatcatgaaatggaaaatggttctcattgaagaccacatgtcttgaaacaaagattcttccgtgagagttcagacatttgtatcctttgtgag 327  Q
    ||||| || ||||| ||||||||| |||  ||||| ||||  ||||||||||| |  ||  ||||||| |||||||| ||||||||||| |||||||| |    
T  408 agaaacccctcatggaatggaaaaaggtcttcattaaagatgacatgtcttgatatgaaagttcttccatgagagttgagacatttgtaacctttgtggg 309  T
Q  328 agttgctataccccaagaacacgcacctagtggtatgaaattgtagcttatgttggttatatggtttgagacatggataacaggcacacccaaaaggttt 427  Q
    |||||||||| ||||||||||| ||||| || || || ||||||||||| ||||||||||| |||||||| || || ||||| ||||| ||||| |||||    
T  308 agttgctatatcccaagaacacacacctggttgtgtggaattgtagcttgtgttggttatacggtttgaggcaagggtaacacgcacaaccaaatggttt 209  T
Q  428 ta 429  Q
    ||    
T  208 ta 207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 74; Significance: 1e-33; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 228 - 429
Target Start/End: Original strand, 29738315 - 29738516
Alignment:
Q  228 agaaagccatcatgaaatggaaaatggttctcattgaagaccacatgtcttgaaacaaagattcttccgtgagagttcagacatttgtatcctttgtgag 327  Q
    ||||| || ||||| ||||||||| |||  ||||| ||||  ||||||||||| |  ||  ||||||| |||||||| ||||||||||| |||||||| |    
T  29738315 agaaacccctcatggaatggaaaaaggtcttcattaaagatgacatgtcttgatatgaaagttcttccatgagagttgagacatttgtaacctttgtggg 29738414  T
Q  328 agttgctataccccaagaacacgcacctagtggtatgaaattgtagcttatgttggttatatggtttgagacatggataacaggcacacccaaaaggttt 427  Q
    |||||||||| ||||||||||| ||||| || || || ||||||||||| ||||||||||| |||||||| || || ||||| ||||| ||||| |||||    
T  29738415 agttgctatatcccaagaacacacacctggttgtgtggaattgtagcttgtgttggttatacggtttgaggcaagggtaacacgcacaaccaaatggttt 29738514  T
Q  428 ta 429  Q
    ||    
T  29738515 ta 29738516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 421
Target Start/End: Original strand, 18110938 - 18110999
Alignment:
Q  360 gtatgaaattgtagcttatgttggttatatggtttgagacatggataacaggcacacccaaa 421  Q
    |||||||| || ||||||| |  |||||||||||||||||| |||||||| ||||| |||||    
T  18110938 gtatgaaactgcagcttatttctgttatatggtttgagacaaggataacaagcacaaccaaa 18110999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 228 - 429
Target Start/End: Complemental strand, 28400926 - 28400725
Alignment:
Q  228 agaaagccatcatgaaatggaaaatggttctcattgaagaccacatgtcttgaaacaaagattcttccgtgagagttcagacatttgtatcctttgtgag 327  Q
    ||||| || ||||| ||||||||| |||  ||||| ||||  ||||||||||| |  ||  | ||||| |||||||| ||||||||||| |||||||| |    
T  28400926 agaaacccctcatggaatggaaaaaggtcttcattaaagatgacatgtcttgatatgaaagtccttccatgagagttgagacatttgtaacctttgtggg 28400827  T
Q  328 agttgctataccccaagaacacgcacctagtggtatgaaattgtagcttatgttggttatatggtttgagacatggataacaggcacacccaaaaggttt 427  Q
    |||||||||| ||||||||||| ||||| || || || ||||||||||| ||||||||||| |||||||| || || ||||| ||||| ||||| |||||    
T  28400826 agttgctatatcccaagaacacacacctggttgtgtggaattgtagcttgtgttggttatacggtttgaggcaagggtaacacgcacaaccaaatggttt 28400727  T
Q  428 ta 429  Q
    ||    
T  28400726 ta 28400725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 228 - 429
Target Start/End: Complemental strand, 491933 - 491732
Alignment:
Q  228 agaaagccatcatgaaatggaaaatggttctcattgaagaccacatgtcttgaaacaaagattcttccgtgagagttcagacatttgtatcctttgtgag 327  Q
    ||||| || ||||| ||||||||| |||  ||||| ||||  ||||||||||| |  ||  | ||||| |||||||| ||||||||||| |||||||| |    
T  491933 agaaacccctcatggaatggaaaaaggtcttcattaaagatgacatgtcttgatatgaaagtccttccatgagagttgagacatttgtaacctttgtggg 491834  T
Q  328 agttgctataccccaagaacacgcacctagtggtatgaaattgtagcttatgttggttatatggtttgagacatggataacaggcacacccaaaaggttt 427  Q
    |||||||||| ||||||||||| ||||| || || || ||||||||||| ||||||||||| |||||||| || || ||||| ||||| ||||| |||||    
T  491833 agttgctatatcccaagaacacacacctggttgtgtggaattgtagcttgtgttggttatacggtttgaggcaagggtaacacgcacaaccaaatggttt 491734  T
Q  428 ta 429  Q
    ||    
T  491733 ta 491732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 2e-31; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 228 - 429
Target Start/End: Complemental strand, 22992991 - 22992790
Alignment:
Q  228 agaaagccatcatgaaatggaaaatggttctcattgaagaccacatgtcttgaaacaaagattcttccgtgagagttcagacatttgtatcctttgtgag 327  Q
    ||||| || ||||| ||||||||| |||  ||||| ||||  ||||||||||| |  ||  | ||||| |||||||| ||||||||||| |||||||| |    
T  22992991 agaaacccctcatggaatggaaaaaggtcttcattaaagatgacatgtcttgatatgaaagtccttccatgagagttgagacatttgtaacctttgtggg 22992892  T
Q  328 agttgctataccccaagaacacgcacctagtggtatgaaattgtagcttatgttggttatatggtttgagacatggataacaggcacacccaaaaggttt 427  Q
    |||||||||| ||||||||||| ||||| || || || ||||||||||| ||||||||||| |||||||| || || ||||| ||||| ||||| |||||    
T  22992891 agttgctatatcccaagaacacacacctggttgtgtggaattgtagcttgtgttggttatacggtttgaggcaagggtaacacgcacaaccaaatggttt 22992792  T
Q  428 ta 429  Q
    ||    
T  22992791 ta 22992790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 218 - 432
Target Start/End: Original strand, 29222490 - 29222704
Alignment:
Q  218 tcttgtgtcaagaaagccatcatgaaatggaaaatggttctcattgaagaccacatgtcttgaaacaaagattcttccgtgagagttcagacatttgtat 317  Q
    |||||| | ||| |||||||||||||| || ||||| |  ||||||||||| ||||||||||| |  |||| |||||| ||||| || | ||||||||||    
T  29222490 tcttgtattaaggaagccatcatgaaaagggaaatgttcttcattgaagactacatgtcttgagatgaagactcttccatgagaattgacacatttgtat 29222589  T
Q  318 cctttgtgagagttgctataccccaagaacacgcacctagtggtatgaaattgtagcttatgttggttatatggtttgagacatggataacaggcacacc 417  Q
    |||||||||||||| ||||| ||||||||||| || ||||| || || || |||| ||| |||||||| || || ||||| || || || |||||||| |    
T  29222590 cctttgtgagagttactatagcccaagaacacacatctagttgtgtggaactgtaacttgtgttggttgtagggcttgaggcaagggtagcaggcacatc 29222689  T
Q  418 caaaaggttttaagg 432  Q
    |||| ||||| ||||    
T  29222690 caaagggtttcaagg 29222704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 218 - 432
Target Start/End: Original strand, 29335789 - 29336003
Alignment:
Q  218 tcttgtgtcaagaaagccatcatgaaatggaaaatggttctcattgaagaccacatgtcttgaaacaaagattcttccgtgagagttcagacatttgtat 317  Q
    |||||| | ||| |||||||||||||| || ||||| |  ||||||||||| ||||||||||| |  |||| |||||| ||||| || | ||||||||||    
T  29335789 tcttgtattaaggaagccatcatgaaaagggaaatgttcttcattgaagactacatgtcttgagatgaagactcttccatgagaattgacacatttgtat 29335888  T
Q  318 cctttgtgagagttgctataccccaagaacacgcacctagtggtatgaaattgtagcttatgttggttatatggtttgagacatggataacaggcacacc 417  Q
    |||||||||||||| ||||| ||||||||||| || ||||| || || || |||| ||| |||||||| || || ||||| || || || |||||||| |    
T  29335889 cctttgtgagagttactatagcccaagaacacacatctagttgtgtggaactgtaacttgtgttggttgtagggcttgaggcaagggtagcaggcacatc 29335988  T
Q  418 caaaaggttttaagg 432  Q
    |||| ||||| ||||    
T  29335989 caaagggtttcaagg 29336003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 70; Significance: 2e-31; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 228 - 429
Target Start/End: Original strand, 8321975 - 8322176
Alignment:
Q  228 agaaagccatcatgaaatggaaaatggttctcattgaagaccacatgtcttgaaacaaagattcttccgtgagagttcagacatttgtatcctttgtgag 327  Q
    ||||| || ||||| ||||||||| |||  ||||| ||||  ||||||||||| |  ||  | ||||| |||||||| ||||||||||| |||||||| |    
T  8321975 agaaacccctcatggaatggaaaaaggtcttcattaaagatgacatgtcttgatatgaaagtccttccatgagagttgagacatttgtaacctttgtggg 8322074  T
Q  328 agttgctataccccaagaacacgcacctagtggtatgaaattgtagcttatgttggttatatggtttgagacatggataacaggcacacccaaaaggttt 427  Q
    |||||||||| ||||||||||| ||||| || || || ||||||||||| ||||||||||| |||||||| || || ||||| ||||| ||||| |||||    
T  8322075 agttgctatatcccaagaacacacacctggttgtgtggaattgtagcttgtgttggttatacggtttgaggcaagggtaacacgcacaaccaaatggttt 8322174  T
Q  428 ta 429  Q
    ||    
T  8322175 ta 8322176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 213 - 427
Target Start/End: Original strand, 29459305 - 29459519
Alignment:
Q  213 ggatttcttgtgtcaagaaagccatcatgaaatggaaaatggttctcattgaagaccacatgtcttgaaacaaagattcttccgtgagagttcagacatt 312  Q
    ||||||||||||||||| || ||||||||||| ||| ||||||||||||||||||| || |||||||| |  || ||||| || || ||||| | |||||    
T  29459305 ggatttcttgtgtcaaggaatccatcatgaaaaggataatggttctcattgaagactacgtgtcttgagatgaaaattctgccatgtgagttgacacatt 29459404  T
Q  313 tgtatcctttgtgagagttgctataccccaagaacacgcacctagtggtatgaaattgtagcttatgttggttatatggtttgagacatggataacaggc 412  Q
    |||| ||||| || |  ||||| || ||||| || || || ||||| || |||||||  ||||| |||| ||| || ||||||||||| || ||||||||    
T  29459405 tgtaccctttatgtgcattgctgtatcccaaaaaaacacatctagttgtgtgaaattagagcttgtgtttgttgtaaggtttgagacaagggtaacaggc 29459504  T
Q  413 acacccaaaaggttt 427  Q
    ||| ||||| |||||    
T  29459505 acatccaaatggttt 29459519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0313 (Bit Score: 59; Significance: 9e-25; HSPs: 1)
Name: scaffold0313
Description:

Target: scaffold0313; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 213 - 427
Target Start/End: Original strand, 8362 - 8576
Alignment:
Q  213 ggatttcttgtgtcaagaaagccatcatgaaatggaaaatggttctcattgaagaccacatgtcttgaaacaaagattcttccgtgagagttcagacatt 312  Q
    ||||||||||||||||| || ||||||||||| ||| ||||||||||||||||||| || |||||||| |  || ||||| || || ||||| | |||||    
T  8362 ggatttcttgtgtcaaggaatccatcatgaaaaggataatggttctcattgaagactacgtgtcttgagatgaaaattctgccatgtgagttgacacatt 8461  T
Q  313 tgtatcctttgtgagagttgctataccccaagaacacgcacctagtggtatgaaattgtagcttatgttggttatatggtttgagacatggataacaggc 412  Q
    |||| ||||| || |  ||||| || ||||| || || || ||||| || ||||| || ||||| |||| ||| || ||||||||||| || || |||||    
T  8462 tgtaccctttatgtgcattgctgtatcccaaaaaaacacatctagttgtgtgaaactggagcttgtgtttgttgtaaggtttgagacaagggtagcaggc 8561  T
Q  413 acacccaaaaggttt 427  Q
    ||| ||||| |||||    
T  8562 acatccaaatggttt 8576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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