View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2221_high_14 (Length: 357)
Name: NF2221_high_14
Description: NF2221
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2221_high_14 |
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Alignment Details
Target: chr3 (Bit Score: 290; Significance: 1e-163; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 290; E-Value: 1e-163
Query Start/End: Original strand, 1 - 341
Target Start/End: Original strand, 21194728 - 21195068
Alignment:
| Q |
1 |
tggcagccgtataaagatttctgagctctctttaagggcatcgcaactaaaattttggccgtatgtgtcggtatttttactataaaggttaacagcataa |
100 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
21194728 |
tggcagccgtataaagatttctgagctctctttattggcatcgcaactaaaattttggctgtatgtgtcggtatttttactataaaggttaacagcataa |
21194827 |
T |
|
| Q |
101 |
ctgcaactgcggttgcaaccacaatttaagactgtgttgggaatgggtagnnnnnnnnnnnnncctatcctcttggatagatggagaacttatttccagt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
21194828 |
ctgcaactgcggttgcaaccacaatttaagactgtgttgggaatgggtagtttttttatttttcctatcctcttggatagatggagaacttatttccagt |
21194927 |
T |
|
| Q |
201 |
cattctttaggattataatgatctcacattgattaattgttgcctttactattcatttgaactatgtttgtgatctagaattagacatgcaaaatttggc |
300 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21194928 |
cattctttaggattataatgatctcacattgattaattgttgcctttactattcatttgaactatgtttgtgatctagaattagacatgcaaaatttggc |
21195027 |
T |
|
| Q |
301 |
atagtactgtaatttccaaaccaattagataatagttaaat |
341 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
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| T |
21195028 |
atagtactgtaatttccaaaccaattagataatagttaaat |
21195068 |
T |
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