View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2221_high_27 (Length: 255)
Name: NF2221_high_27
Description: NF2221
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2221_high_27 |
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Alignment Details
Target: chr3 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 8 - 239
Target Start/End: Original strand, 30466024 - 30466255
Alignment:
| Q |
8 |
tcgaagaatattgattcatgtaattatttgttttgtctttgaagtttactcatttgttgaatcaattattatttctttatttcttgctagtaattaatga |
107 |
Q |
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| T |
30466024 |
tcgaaaaatattgattcatgtaattatttgttttgtctttgaagtttactcatttgttgaatcaattattatttctttatttcttgccagtaattaatga |
30466123 |
T |
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| Q |
108 |
ctaattgttttggcatcttatagatttttaaagaaatatcaaatattagtgatgatgagcatattggtgtgaagagaattagggacctcaataccaaacc |
207 |
Q |
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| T |
30466124 |
ctaattgttttggcatcttatagatttttaaagaaatatcaaatattagtgatgatgagcatattggtgtgaagagaattagggacctcaataccaaacc |
30466223 |
T |
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| Q |
208 |
attcatcaatgctatgaagaaaagatacaatg |
239 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
30466224 |
attcatcaatgctatgaagaaaagatacaatg |
30466255 |
T |
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