View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2221_low_22 (Length: 287)
Name: NF2221_low_22
Description: NF2221
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2221_low_22 |
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Alignment Details
Target: chr3 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 13 - 246
Target Start/End: Complemental strand, 7310098 - 7309865
Alignment:
| Q |
13 |
gaacaagcggaggaggaggaggaagagaaaggtttctccaacaaaccctactccgtcgaatcgattcatgcaaatcaagattctccactgctgatgatat |
112 |
Q |
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| T |
7310098 |
gaacaagcggaggaggaggaggaagagaaaggtttctccaacaaaccctactccgtcgaatcgattcatgcaaatcaagattctccactgctgatgatat |
7309999 |
T |
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| Q |
113 |
cgtcgaccatctccgttcaacttactctagttatcaccgaatgaagtttcaaactctccttttttcggttcgaaaagctcttcttgcttccaacaacaat |
212 |
Q |
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| T |
7309998 |
cgtcgaccatctccgttcaacttactctagttatcaccgaatgaagtttcaaactctccttttttcggttcgaaaagctcttcttgcttccaacaacaat |
7309899 |
T |
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| Q |
213 |
caagcttcatatcattctcgaaggagacgaagga |
246 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
7309898 |
caagcttcatatcattctcgaaggagacgaagga |
7309865 |
T |
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