View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2221_low_27 (Length: 262)
Name: NF2221_low_27
Description: NF2221
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2221_low_27 |
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Alignment Details
Target: chr7 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 12 - 244
Target Start/End: Complemental strand, 44183222 - 44182990
Alignment:
| Q |
12 |
atgaacttgtcctccactgaactataccgagatactctcttctcaaatctcaattaaaaatggcattagaagaagaagcagtagttgtgaacatggagag |
111 |
Q |
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| T |
44183222 |
atgaacttgtcctccactgaactataccgagatactctcttctcaaatctcaattaaaaatggcattagaagaagaagcagtagttgtgaacatggagag |
44183123 |
T |
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| Q |
112 |
catacaacaaaatcatgtttctgatcatcctagagtactaatccaagagaagaaacagctttcgttgcaaaagtatcgaagaaacgattctcttgaaatg |
211 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44183122 |
catacaacaaaatcatgtttctgatcatcctagagtaccaatccaagagaagaaacagctttcgttgcaaaagtatcgaagaaacgattctcttgaaatg |
44183023 |
T |
|
| Q |
212 |
gaatctcgcaccatctcccatgcccgtcactct |
244 |
Q |
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||||||||||||||||||||||||||| ||||| |
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| T |
44183022 |
gaatctcgcaccatctcccatgcccgttactct |
44182990 |
T |
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