View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2221_low_8 (Length: 457)

Name: NF2221_low_8
Description: NF2221
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2221_low_8
NF2221_low_8
[»] chr4 (43 HSPs)
chr4 (1-254)||(53152071-53152322)
chr4 (352-434)||(53151927-53152009)
chr4 (1-110)||(9118756-9118865)
chr4 (1-110)||(41486035-41486144)
chr4 (1-116)||(14451463-14451578)
chr4 (1-114)||(624199-624313)
chr4 (1-115)||(33899213-33899327)
chr4 (1-110)||(47965809-47965916)
chr4 (1-110)||(51194339-51194448)
chr4 (1-115)||(30079916-30080030)
chr4 (1-110)||(5932050-5932159)
chr4 (1-110)||(12112697-12112806)
chr4 (1-110)||(42959342-42959451)
chr4 (1-117)||(51746290-51746406)
chr4 (1-116)||(17475947-17476061)
chr4 (1-110)||(25317958-25318066)
chr4 (1-94)||(36111303-36111396)
chr4 (12-115)||(50272960-50273063)
chr4 (53-110)||(55601600-55601657)
chr4 (53-116)||(41389759-41389822)
chr4 (3-110)||(6141670-6141777)
chr4 (1-116)||(21260368-21260483)
chr4 (53-110)||(13389342-13389399)
chr4 (53-110)||(26206869-26206926)
chr4 (53-110)||(31076175-31076232)
chr4 (53-110)||(54669476-54669533)
chr4 (58-109)||(23822141-23822192)
chr4 (53-114)||(439148-439209)
chr4 (1-118)||(28657325-28657442)
chr4 (53-110)||(35820293-35820350)
chr4 (1-110)||(2999182-2999291)
chr4 (68-110)||(37066124-37066166)
chr4 (53-114)||(53647312-53647374)
chr4 (53-109)||(21025723-21025780)
chr4 (54-110)||(2256223-2256279)
chr4 (1-110)||(22819719-22819828)
chr4 (1-110)||(46405866-46405975)
chr4 (1-43)||(15522425-15522467)
chr4 (53-114)||(38715369-38715431)
chr4 (53-110)||(41082439-41082496)
chr4 (54-115)||(43326230-43326291)
chr4 (53-114)||(48536420-48536481)
chr4 (1-45)||(39344937-39344981)
[»] chr1 (44 HSPs)
chr1 (1-119)||(756926-757044)
chr1 (5-110)||(7128192-7128297)
chr1 (1-110)||(4514346-4514455)
chr1 (1-110)||(9008295-9008404)
chr1 (1-110)||(33024463-33024572)
chr1 (1-116)||(3603181-3603296)
chr1 (3-116)||(20565004-20565117)
chr1 (1-110)||(38303580-38303689)
chr1 (1-109)||(8411611-8411719)
chr1 (1-117)||(26585764-26585880)
chr1 (2-109)||(51191859-51191966)
chr1 (1-114)||(3024638-3024751)
chr1 (1-110)||(21340592-21340700)
chr1 (1-110)||(26837522-26837631)
chr1 (1-115)||(46082008-46082122)
chr1 (1-110)||(1852843-1852952)
chr1 (53-113)||(36494573-36494633)
chr1 (1-107)||(36673627-36673732)
chr1 (1-110)||(51286260-51286368)
chr1 (53-115)||(34008301-34008363)
chr1 (58-116)||(37178831-37178889)
chr1 (1-109)||(47214278-47214385)
chr1 (1-115)||(36779156-36779270)
chr1 (1-119)||(902708-902826)
chr1 (53-110)||(1790630-1790687)
chr1 (1-110)||(50328033-50328142)
chr1 (1-118)||(52362552-52362669)
chr1 (1-116)||(13489732-13489847)
chr1 (1-120)||(48326038-48326156)
chr1 (1-110)||(40316836-40316945)
chr1 (53-109)||(44632649-44632705)
chr1 (54-108)||(16856569-16856624)
chr1 (1-113)||(46172301-46172408)
chr1 (1-115)||(10889933-10890047)
chr1 (68-110)||(16987074-16987116)
chr1 (53-110)||(29147765-29147823)
chr1 (53-115)||(41507081-41507143)
chr1 (67-109)||(49660316-49660358)
chr1 (53-110)||(33358050-33358107)
chr1 (1-74)||(19969490-19969563)
chr1 (1-110)||(36577304-36577413)
chr1 (53-109)||(47398345-47398401)
chr1 (1-45)||(50781527-50781571)
chr1 (1-110)||(52714793-52714902)
[»] chr6 (25 HSPs)
chr6 (1-114)||(30036682-30036795)
chr6 (1-110)||(14986636-14986745)
chr6 (1-114)||(30152418-30152531)
chr6 (1-110)||(5327483-5327592)
chr6 (1-112)||(2075341-2075452)
chr6 (1-109)||(335133-335239)
chr6 (1-110)||(3610853-3610962)
chr6 (1-110)||(11547421-11547530)
chr6 (1-110)||(34504090-34504199)
chr6 (53-114)||(2777205-2777266)
chr6 (53-110)||(22341067-22341124)
chr6 (54-108)||(576953-577007)
chr6 (1-110)||(32459408-32459517)
chr6 (1-110)||(18141193-18141302)
chr6 (1-114)||(26832716-26832829)
chr6 (63-107)||(27763361-27763405)
chr6 (1-110)||(35213453-35213562)
chr6 (53-115)||(3832585-3832647)
chr6 (1-71)||(754369-754439)
chr6 (53-117)||(2688949-2689014)
chr6 (53-110)||(13658953-13659010)
chr6 (63-124)||(33656903-33656963)
chr6 (1-110)||(1369430-1369539)
chr6 (1-45)||(20822825-20822869)
chr6 (53-109)||(31749487-31749543)
[»] chr8 (25 HSPs)
chr8 (1-110)||(32843834-32843943)
chr8 (1-115)||(7955894-7956008)
chr8 (1-110)||(1633782-1633891)
chr8 (1-110)||(36110208-36110317)
chr8 (7-110)||(34591340-34591443)
chr8 (5-110)||(16966859-16966964)
chr8 (1-110)||(32847578-32847687)
chr8 (53-110)||(35564411-35564468)
chr8 (1-119)||(30135897-30136016)
chr8 (1-110)||(11017875-11017984)
chr8 (1-110)||(37783863-37783972)
chr8 (54-117)||(6968118-6968181)
chr8 (54-108)||(33589125-33589179)
chr8 (1-110)||(7592919-7593029)
chr8 (53-110)||(18651482-18651539)
chr8 (53-121)||(1871496-1871564)
chr8 (53-116)||(7586049-7586112)
chr8 (1-81)||(45529167-45529247)
chr8 (6-110)||(13971199-13971299)
chr8 (1-114)||(41521038-41521151)
chr8 (53-108)||(11657895-11657950)
chr8 (53-110)||(6991699-6991757)
chr8 (1-110)||(7478850-7478958)
chr8 (53-110)||(36531716-36531773)
chr8 (53-112)||(38708184-38708244)
[»] chr7 (31 HSPs)
chr7 (1-110)||(13162989-13163098)
chr7 (1-110)||(19785971-19786080)
chr7 (1-115)||(39231615-39231729)
chr7 (1-110)||(32815238-32815347)
chr7 (1-110)||(38779636-38779745)
chr7 (1-116)||(41402578-41402693)
chr7 (1-110)||(29162868-29162977)
chr7 (1-110)||(37808656-37808765)
chr7 (53-106)||(26041216-26041269)
chr7 (1-106)||(13906353-13906458)
chr7 (1-110)||(21023009-21023118)
chr7 (1-106)||(40353334-40353439)
chr7 (53-115)||(23048287-23048349)
chr7 (21-106)||(46773560-46773645)
chr7 (53-108)||(27163554-27163609)
chr7 (1-110)||(47078144-47078252)
chr7 (53-111)||(29002728-29002786)
chr7 (53-110)||(41666814-41666871)
chr7 (1-110)||(39137222-39137331)
chr7 (1-114)||(35452460-35452574)
chr7 (1-110)||(7817706-7817815)
chr7 (1-110)||(11352866-11352975)
chr7 (1-110)||(28036814-28036923)
chr7 (1-110)||(43573435-43573544)
chr7 (53-105)||(46148113-46148165)
chr7 (53-108)||(39823930-39823985)
chr7 (53-110)||(4713695-4713753)
chr7 (1-119)||(21822482-21822600)
chr7 (64-114)||(33775073-33775123)
chr7 (69-110)||(3040234-3040275)
chr7 (1-110)||(3343222-3343331)
[»] chr3 (37 HSPs)
chr3 (1-110)||(44677376-44677485)
chr3 (1-110)||(32767746-32767855)
chr3 (1-118)||(37508382-37508499)
chr3 (1-110)||(10206865-10206974)
chr3 (1-110)||(36121891-36122000)
chr3 (1-116)||(54028012-54028127)
chr3 (1-115)||(54195410-54195524)
chr3 (1-110)||(11633683-11633792)
chr3 (1-110)||(28419106-28419215)
chr3 (1-106)||(30909099-30909204)
chr3 (1-110)||(43905043-43905152)
chr3 (1-110)||(54773645-54773754)
chr3 (53-110)||(35201432-35201489)
chr3 (53-110)||(39670989-39671046)
chr3 (53-109)||(29633965-29634021)
chr3 (1-114)||(49363139-49363252)
chr3 (1-116)||(22371261-22371376)
chr3 (53-114)||(30862961-30863022)
chr3 (1-108)||(39020052-39020160)
chr3 (1-110)||(49417645-49417753)
chr3 (53-116)||(51973254-51973317)
chr3 (1-108)||(390879-390986)
chr3 (56-117)||(26996440-26996501)
chr3 (1-110)||(33375930-33376044)
chr3 (53-110)||(55013124-55013181)
chr3 (1-115)||(46253692-46253804)
chr3 (1-120)||(55400069-55400188)
chr3 (53-110)||(46982795-46982852)
chr3 (53-108)||(33795618-33795674)
chr3 (1-110)||(39697114-39697223)
chr3 (1-110)||(51465806-51465915)
chr3 (53-108)||(13934497-13934552)
chr3 (53-110)||(9158764-9158822)
chr3 (1-43)||(52485543-52485585)
chr3 (65-114)||(53718142-53718191)
chr3 (53-108)||(346485-346541)
chr3 (1-45)||(24482920-24482964)
[»] chr5 (26 HSPs)
chr5 (1-117)||(5042318-5042434)
chr5 (1-117)||(33620678-33620794)
chr5 (1-110)||(4430828-4430937)
chr5 (53-117)||(21064111-21064175)
chr5 (1-110)||(35098897-35099006)
chr5 (1-108)||(2688880-2688987)
chr5 (53-115)||(39088756-39088818)
chr5 (1-110)||(8267712-8267821)
chr5 (1-110)||(16437456-16437565)
chr5 (53-111)||(2224913-2224971)
chr5 (53-114)||(42267467-42267528)
chr5 (53-116)||(17402808-17402871)
chr5 (1-110)||(5821503-5821613)
chr5 (1-106)||(15267854-15267959)
chr5 (1-110)||(15952937-15953046)
chr5 (1-110)||(43441808-43441917)
chr5 (1-73)||(18842250-18842322)
chr5 (1-116)||(8675319-8675434)
chr5 (53-110)||(23126233-23126290)
chr5 (1-110)||(10649505-10649614)
chr5 (53-117)||(39628911-39628975)
chr5 (1-110)||(41175598-41175707)
chr5 (1-110)||(37700530-37700638)
chr5 (1-116)||(34124691-34124806)
chr5 (1-45)||(6517782-6517826)
chr5 (1-114)||(38704085-38704198)
[»] scaffold0471 (1 HSPs)
scaffold0471 (1-110)||(77-186)
[»] chr2 (25 HSPs)
chr2 (1-110)||(433920-434029)
chr2 (1-110)||(18177010-18177119)
chr2 (1-110)||(29051547-29051654)
chr2 (53-109)||(17779504-17779560)
chr2 (2-110)||(35705565-35705672)
chr2 (1-114)||(9634324-9634437)
chr2 (1-106)||(41569292-41569397)
chr2 (53-110)||(670364-670421)
chr2 (53-110)||(7552679-7552736)
chr2 (53-103)||(5200125-5200175)
chr2 (68-114)||(29684548-29684594)
chr2 (53-110)||(28679438-28679495)
chr2 (53-110)||(31389669-31389726)
chr2 (1-110)||(4952372-4952481)
chr2 (53-110)||(4753282-4753339)
chr2 (1-110)||(4758531-4758640)
chr2 (1-110)||(32869896-32870005)
chr2 (53-116)||(14233604-14233667)
chr2 (53-115)||(2464137-2464199)
chr2 (53-114)||(10833535-10833597)
chr2 (57-110)||(6941065-6941118)
chr2 (53-114)||(42223840-42223901)
chr2 (1-45)||(6170700-6170744)
chr2 (1-45)||(6999025-6999069)
chr2 (53-113)||(15245649-15245708)
[»] scaffold0449 (1 HSPs)
scaffold0449 (1-124)||(9273-9396)
[»] scaffold0687 (1 HSPs)
scaffold0687 (1-110)||(2267-2377)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-110)||(122901-123008)
[»] scaffold0136 (1 HSPs)
scaffold0136 (1-110)||(38495-38604)


Alignment Details
Target: chr4 (Bit Score: 166; Significance: 1e-88; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 1 - 254
Target Start/End: Complemental strand, 53152322 - 53152071
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    ||||||||||||||||||| || | ||||||  ||||||||||||       |||||||||||||||||||||||||||||||||| |||||| ||||||    
T  53152322 tttttactttatctctatattgttatggtttctgtgccaataccacttttttctttgtaaagtatggttgtcaaataagttgtcaccaaattggttgttc 53152223  T
Q  101 aaataacacttctcatatatttttgctacgaaagaaacttgtgtaatttttaaattttttgactttggtccttaccgttaccatttggtacaaaaacaca 200  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||| ||||||||||||||||||| |||    
T  53152222 aaataacactcctcatatatttttgctacgaaagaaacttgtgtaatttctaaa--ttttgactttggtccttaccattaccatttggtacaaaaataca 53152125  T
Q  201 catatggctaacaaagattgacttaatgacctatgatgtagtgatattggctga 254  Q
    ||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  53152124 catgtggctaacagagattgacttagtgacctatgatgtagtgatattggctga 53152071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 352 - 434
Target Start/End: Complemental strand, 53152009 - 53151927
Alignment:
Q  352 ctcattacacttccatcttcatccttaaaattacacgcttaagagttgattaaacacccttaaatccttcgaatcaccccacc 434  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  53152009 ctcattacacttccatcttcatccttaaaattacacgcttaagagttgattaaacacccttaaatccttcggatcaccccacc 53151927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 9118865 - 9118756
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||| || |||||||||||||||||       ||||||||| |||||||||||||||||||||||| |||||| ||||||    
T  9118865 tttttactttatctctctattgctatgattttcgtgccaataccatttttttctttgtaaaatatggttgtcaaataagttgtcaccaaattggttgttc 9118766  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  9118765 aaataacact 9118756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 41486144 - 41486035
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||| |||||| |||||||||||||       ||||||||| |||||||||||||||||||||||| |||||| ||||||    
T  41486144 tttttactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttgtcaccaaattggttgttc 41486045  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  41486044 aaataacact 41486035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 14451463 - 14451578
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || || | ||||||||||| ||||||||       ||||||||| |||||||||||||||||||||||| |||||| ||||||    
T  14451463 tttttactttatctctctattgttatggttttcgtgtcaataccacttttttctttgtaaaatatggttgtcaaataagttgtcaccaaattggttgttc 14451562  T
Q  101 aaataacacttctcat 116  Q
    |||||||||| |||||    
T  14451563 aaataacactcctcat 14451578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 624313 - 624199
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaag-tatggttgtcaaataagttgtcactaaattgattgtt 99  Q
    |||||||||||||||| || |||| ||||||||||||||||||||       |||||||||  |||||||||||||||||||||||| |||||  |||||    
T  624313 tttttactttatctctctattgctatggttttcgtgccaataccacttttttctttgtaaaaatatggttgtcaaataagttgtcaccaaattagttgtt 624214  T
Q  100 caaataacacttctc 114  Q
    |||||||||||||||    
T  624213 caaataacacttctc 624199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 33899327 - 33899213
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    ||||| |||||||||| || || | |||||| |||||||||||||       ||||||||| |||||||||||||||||||||||| |||||| ||||||    
T  33899327 ttttttctttatctctctattgttatggtttccgtgccaataccatttttttctttgtaaaatatggttgtcaaataagttgtcaccaaattggttgttc 33899228  T
Q  101 aaataacacttctca 115  Q
    |||||||||||||||    
T  33899227 aaataacacttctca 33899213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 47965809 - 47965916
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    ||||||||||||||||||  || | ||||||||||||||||||||       ||||||||| |||||||||||||||||||||||| |||||| ||||||    
T  47965809 tttttactttatctctat--tgatatggttttcgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttgtcaccaaattggttgttc 47965906  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  47965907 aaataacact 47965916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 51194339 - 51194448
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || || | ||||||||||||||||||||       ||||||||| |||||||||||||||||||||||  |||||| ||||||    
T  51194339 tttttactttatctctctattgttatggttttcgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttgtcatcaaattggttgttc 51194438  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  51194439 aaataacact 51194448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 30079916 - 30080030
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||| | |||| |||||||||||||       ||||||||| ||||||||||||||||||| |||| |||||| ||||||    
T  30079916 tttttactttatctctctattgctatagtttccgtgccaataccacttttttctttgtaaattatggttgtcaaataagttttcaccaaattggttgttc 30080015  T
Q  101 aaataacacttctca 115  Q
    |||||||||| ||||    
T  30080016 aaataacactcctca 30080030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 5932159 - 5932050
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    ||||| |||||||| | || |||| |||||| |||||||||||||       ||||||||| |||||||||||||||||||||||| |||||| ||||||    
T  5932159 ttttttctttatctttctattgctatggtttccgtgccaataccatttttttctttgtaaaatatggttgtcaaataagttgtcaccaaattggttgttc 5932060  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  5932059 aaataacact 5932050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 12112697 - 12112806
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||| || ||| |||| ||||||||       |||||||||||||||||||||||||||||||||| |||||| ||||||    
T  12112697 tttttactttatctctctattgctatgatttccgtgtcaataccacttttttctttgtaaagtatggttgtcaaataagttgtcaccaaattggttgttc 12112796  T
Q  101 aaataacact 110  Q
    ||||| ||||    
T  12112797 aaatatcact 12112806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 42959342 - 42959451
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||| |||||| |||| ||||||||       ||||||||| |||| |||||||||||||| ||||||||||| ||||||    
T  42959342 tttttactttatctctctattgctatggtttccgtgtcaataccacttttttctttgtaaaatatgattgtcaaataagttatcactaaattggttgttc 42959441  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  42959442 aaataacact 42959451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 51746290 - 51746406
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || || | |||||| |||||||||| ||       ||||||||| |||| ||||||||||||||||||| ||||| |||||||    
T  51746290 tttttactttatctctctattgttatggtttccgtgccaatatcacttttttctttgtaaaatatgtttgtcaaataagttgtcaccaaattaattgttc 51746389  T
Q  101 aaataacacttctcata 117  Q
    |||||||||| ||||||    
T  51746390 aaataacactcctcata 51746406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 17475947 - 17476061
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||| |||||| |||| |||||| |       ||||||||| |||| ||||||||||||||||||| |||||||||||||    
T  17475947 tttttactttatctctctattgctatggtttccgtgtcaatactacttttt-ctttgtaaattatgattgtcaaataagttgtcaccaaattgattgttc 17476045  T
Q  101 aaataacacttctcat 116  Q
    |||||||||| |||||    
T  17476046 aaataacactcctcat 17476061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 25318066 - 25317958
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||| |||||| |||| ||||||||       ||||||||| ||||||||||||||||||| |||| |||||| ||||||    
T  25318066 tttttactttatctctttattgct-tggtttccgtgtcaataccacttttttctttgtaaaatatggttgtcaaataagttatcaccaaattggttgttc 25317968  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  25317967 aaataacact 25317958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 36111396 - 36111303
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattga 94  Q
    |||||||||||||||| || |||| |||||| |||||||||||||       ||||||||| |||||||||||||||||||||||| |||||||    
T  36111396 tttttactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttgtcaccaaattga 36111303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 115
Target Start/End: Complemental strand, 50273063 - 50272960
Alignment:
Q  12 tctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaataacactt 111  Q
    ||||| || |||| |||||| |||||||||||||       ||||||||| |||||||||||||||||||||||| |||||| |||||||||||| |||     
T  50273063 tctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttgtcaccaaattggttgttcaaataatactc 50272964  T
Q  112 ctca 115  Q
    ||||    
T  50272963 ctca 50272960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 53 - 110
Target Start/End: Complemental strand, 55601657 - 55601600
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaataacact 110  Q
    ||||||||| | |||||||||||||||||||||| |||||||||||||||||||||||    
T  55601657 ctttgtaaattttggttgtcaaataagttgtcacaaaattgattgttcaaataacact 55601600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 53 - 116
Target Start/End: Complemental strand, 41389822 - 41389759
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaataacacttctcat 116  Q
    ||||||||| ||||||||| |||||||| ||||| |||||| ||||||||||||||||||||||    
T  41389822 ctttgtaaattatggttgtaaaataagtagtcacgaaattggttgttcaaataacacttctcat 41389759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 6141777 - 6141670
Alignment:
Q  3 tttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaa 102  Q
    |||||||||||||| || |||| || ||| |||||||||||||       ||||||||| |||  ||||||||||| | |||||||||||| ||||||||    
T  6141777 tttactttatctctttattgctatgatttccgtgccaataccacttttttctttgtaaaatataattgtcaaataaatagtcactaaattggttgttcaa 6141678  T
Q  103 ataacact 110  Q
    ||||||||    
T  6141677 ataacact 6141670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 21260368 - 21260483
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    ||||| |||||||||| || || | |||||| |||||||||||||       ||||||||| |||| ||||||||||| ||||||| |||||| ||||||    
T  21260368 ttttttctttatctctctattgttatggtttccgtgccaataccacctttttctttgtaaaatatgattgtcaaataaattgtcaccaaattggttgttc 21260467  T
Q  101 aaataacacttctcat 116  Q
    ||| |||||| |||||    
T  21260468 aaaaaacactcctcat 21260483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 53 - 110
Target Start/End: Complemental strand, 13389399 - 13389342
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaataacact 110  Q
    |||| |||| ||||||||||||||||||||| || |||||||||||||||||||||||    
T  13389399 ctttataaattatggttgtcaaataagttgtgaccaaattgattgttcaaataacact 13389342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 53 - 110
Target Start/End: Complemental strand, 26206926 - 26206869
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaataacact 110  Q
    ||||||||| |||||||||||||||||||||||| |||||  ||||||||||||||||    
T  26206926 ctttgtaaaatatggttgtcaaataagttgtcaccaaattagttgttcaaataacact 26206869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 53 - 110
Target Start/End: Original strand, 31076175 - 31076232
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaataacact 110  Q
    ||||||||| |||||||||||||||||||||||| |||||| ||||| ||||||||||    
T  31076175 ctttgtaaattatggttgtcaaataagttgtcaccaaattggttgtttaaataacact 31076232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 53 - 110
Target Start/End: Complemental strand, 54669533 - 54669476
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaataacact 110  Q
    ||||||||| |||||||||||||||||||||||  |||||| ||||||||||||||||    
T  54669533 ctttgtaaattatggttgtcaaataagttgtcatcaaattggttgttcaaataacact 54669476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 58 - 109
Target Start/End: Complemental strand, 23822192 - 23822141
Alignment:
Q  58 taaagtatggttgtcaaataagttgtcactaaattgattgttcaaataacac 109  Q
    |||| |||||||||||||||||||||||| |||||| |||||||||||||||    
T  23822192 taaaatatggttgtcaaataagttgtcaccaaattggttgttcaaataacac 23822141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 53 - 114
Target Start/End: Complemental strand, 439209 - 439148
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaataacacttctc 114  Q
    ||||||||| |||||||||||||||| || |||| |||||  ||||||||||||||||||||    
T  439209 ctttgtaaaatatggttgtcaaataaattatcaccaaattagttgttcaaataacacttctc 439148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 28657442 - 28657325
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtca-ctaaattgattgtt 99  Q
    |||||||||||||||| || |||| |||||| ||||| ||||||        ||||||||| ||||||||||| | ||||||||| | |||||  |||||    
T  28657442 tttttactttatctctctattgctttggtttccgtgcaaatacctacgttttctttgtaaattatggttgtcaca-aagttgtcaaccaaattcgttgtt 28657344  T
Q  100 caaataacacttctcatat 118  Q
    |||||||||||||||||||    
T  28657343 caaataacacttctcatat 28657325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 53 - 110
Target Start/End: Original strand, 35820293 - 35820350
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaataacact 110  Q
    ||||||||| ||| ||||||||||||||| |||| ||||| |||||||||||||||||    
T  35820293 ctttgtaaactatagttgtcaaataagttatcaccaaattaattgttcaaataacact 35820350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 2999182 - 2999291
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||| |||||||| ||| |||||||       ||||||||| ||||||||||  | ||||||||| | || || ||||||    
T  2999182 tttttactttatctctctattgctttggttttcatgcaaataccaactttttctttgtaaattatggttgtcctaaaagttgtcaattaaatggttgttc 2999281  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  2999282 aaataacact 2999291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 68 - 110
Target Start/End: Original strand, 37066124 - 37066166
Alignment:
Q  68 ttgtcaaataagttgtcactaaattgattgttcaaataacact 110  Q
    ||||||||||||||||||| |||||| ||||||||||||||||    
T  37066124 ttgtcaaataagttgtcaccaaattggttgttcaaataacact 37066166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 53 - 114
Target Start/End: Complemental strand, 53647374 - 53647312
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtca-ctaaattgattgttcaaataacacttctc 114  Q
    |||| |||| ||||||||||| ||||||||||| | |||||||||||||||||| ||||||||    
T  53647374 ctttataaattatggttgtcacataagttgtcaaccaaattgattgttcaaatatcacttctc 53647312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 53 - 109
Target Start/End: Original strand, 21025723 - 21025780
Alignment:
Q  53 ctttgtaaagta-tggttgtcaaataagttgtcactaaattgattgttcaaataacac 109  Q
    ||||||||| || ||||||||| | ||||||||||| |||||||||||||||||||||    
T  21025723 ctttgtaaattagtggttgtcacaaaagttgtcactcaattgattgttcaaataacac 21025780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 54 - 110
Target Start/End: Complemental strand, 2256279 - 2256223
Alignment:
Q  54 tttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaataacact 110  Q
    |||||||| |||| |||| |||||||||||||| |||||  ||||||||||||||||    
T  2256279 tttgtaaattatgattgtaaaataagttgtcaccaaattagttgttcaaataacact 2256223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 22819719 - 22819828
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||| || ||||||||| |||||||       ||||||||| ||||||||||  | |||||||||   || || ||||||    
T  22819719 tttttactttatctctttattgctttgattttcgtgcaaataccaactttttctttgtaaattatggttgtcccaaaagttgtcaaccaaatggttgttc 22819818  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  22819819 aaataacact 22819828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 46405975 - 46405866
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||| || ||||||||| |||||||       ||||||||| |||||||||| || || || |||   || |||||||||    
T  46405975 tttttactttatctctctattgctttgattttcgtgcaaataccaactttttctttgtaaattatggttgtccaaaaaattatcaaccaaatgattgttc 46405876  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  46405875 aaataacact 46405866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 15522425 - 15522467
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaatac 43  Q
    ||||||||||||||||||| |||| ||||||||||| ||||||    
T  15522425 tttttactttatctctatattgctttggttttcgtgtcaatac 15522467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 53 - 114
Target Start/End: Original strand, 38715369 - 38715431
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtca-ctaaattgattgttcaaataacacttctc 114  Q
    |||| |||| ||| ||||||| | ||||||||| | |||||||||||||||||||||||||||    
T  38715369 ctttataaattatagttgtcacacaagttgtcaaccaaattgattgttcaaataacacttctc 38715431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 110
Target Start/End: Original strand, 41082439 - 41082496
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaataacact 110  Q
    ||||||||| |||  ||||||||||||||| ||  |||||| ||||||||||||||||    
T  41082439 ctttgtaaattataattgtcaaataagttgccatcaaattggttgttcaaataacact 41082496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 43326291 - 43326230
Alignment:
Q  54 tttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaataacacttctca 115  Q
    |||||||| |||  |||||||||||||| |||| |||||| || ||||||||||||| ||||    
T  43326291 tttgtaaattataattgtcaaataagttatcaccaaattgtttattcaaataacactcctca 43326230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 114
Target Start/End: Original strand, 48536420 - 48536481
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaataacacttctc 114  Q
    ||||||| | |||| ||||||||||| || |||| |||||  ||||||||||||||||||||    
T  48536420 ctttgtacaatatgattgtcaaataaattatcaccaaattagttgttcaaataacacttctc 48536481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 39344981 - 39344937
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaatacca 45  Q
    |||||||||||||||| || |||| |||||||||||| |||||||    
T  39344981 tttttactttatctctctattgctttggttttcgtgcaaatacca 39344937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 70; Significance: 2e-31; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 756926 - 757044
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||| |||||| |||||||||||||       |||||||||||||||||||||||||||||||||| |||||| ||||||    
T  756926 tttttactttatctctctattgctatggtttccgtgccaataccatttttttctttgtaaagtatggttgtcaaataagttgtcaccaaattggttgttc 757025  T
Q  101 aaataacacttctcatata 119  Q
    |||||||| ||||||||||    
T  757026 aaataacatttctcatata 757044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 5 - 110
Target Start/End: Original strand, 7128192 - 7128297
Alignment:
Q  5 tactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaat 104  Q
    |||||||||||| || |||| |||||| |||||||||||||       |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  7128192 tactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaagtatggttgtcaaataagttgtcaccaaattgattgttcaaat 7128291  T
Q  105 aacact 110  Q
    ||||||    
T  7128292 aacact 7128297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 4514455 - 4514346
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||| | || |||| |||||| |||||||||| ||       ||||||||| |||| |||||||||||||||||||||||||||||||||    
T  4514455 tttttactttatctttctattgctatggtttccgtgccaatatcacttttttctttgtaaaatatgtttgtcaaataagttgtcactaaattgattgttc 4514356  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  4514355 aaataacact 4514346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 9008295 - 9008404
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||  ||||||   |||||||||||       |||||||||||||||||||||||||||||||||| |||||||||||||    
T  9008295 tttttactttatctctctattgccatggtttctatgccaataccacttttttctttgtaaagtatggttgtcaaataagttgtcaccaaattgattgttc 9008394  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  9008395 aaataacact 9008404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 33024572 - 33024463
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    ||||| |||||||||| || |||| |||||| |||||||||| ||       ||||||||| |||||||||||||||||||||||| |||||||||||||    
T  33024572 ttttttctttatctctctattgctatggtttccgtgccaatatcacttttttctttgtaaaatatggttgtcaaataagttgtcaccaaattgattgttc 33024473  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  33024472 aaataacact 33024463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 3603181 - 3603296
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||| ||||||||| || |||| |||||| |||||||||||||       ||||||||| |||||||||||||||||||||||  |||||| ||||||    
T  3603181 tttttagtttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttgtcatcaaattggttgttc 3603280  T
Q  101 aaataacacttctcat 116  Q
    |||||||||| |||||    
T  3603281 aaataacactcctcat 3603296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 3 - 116
Target Start/End: Complemental strand, 20565117 - 20565004
Alignment:
Q  3 tttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaa 102  Q
    |||||||||||||| || | || |||||| |||| ||||||||       ||||||||| |||||||||||||||||||||||| |||||| ||||||||    
T  20565117 tttactttatctctctattactatggtttccgtggcaataccacttttttctttgtaaaatatggttgtcaaataagttgtcaccaaattggttgttcaa 20565018  T
Q  103 ataacacttctcat 116  Q
    |||||||| |||||    
T  20565017 ataacactcctcat 20565004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 38303689 - 38303580
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||  |||||| |||||||||||||       ||||||||| ||||||||||||||||||| |||| |||||| ||||||    
T  38303689 tttttactttatctctctattgccatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttatcaccaaattggttgttc 38303590  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  38303589 aaataacact 38303580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 8411719 - 8411611
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || || | |||||| |||||||||||||       ||||||||| ||||||||| |||||||||||||| |||||| ||||||    
T  8411719 tttttactttatctctctattgttttggtttccgtgccaataccacttttttctttgtaaaatatggttgttaaataagttgtcaccaaattggttgttc 8411620  T
Q  101 aaataacac 109  Q
    |||||||||    
T  8411619 aaataacac 8411611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 26585880 - 26585764
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    ||||||||||||| || || || | |||||| |||| ||||||||       |||||||||||||||||||||||||||||||||  |||||| ||||||    
T  26585880 tttttactttatcgctctattgttatggtttccgtgtcaataccacttttttctttgtaaagtatggttgtcaaataagttgtcatcaaattggttgttc 26585781  T
Q  101 aaataacacttctcata 117  Q
    |||||||||| ||||||    
T  26585780 aaataacactcctcata 26585764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 2 - 109
Target Start/End: Original strand, 51191859 - 51191966
Alignment:
Q  2 ttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttca 101  Q
    ||||||||||||||| || || | || ||| |||||||||||||       ||||||||| |||||||||||||||||||||||| |||||| |||||||    
T  51191859 ttttactttatctctctattgttatgctttccgtgccaataccatttttttctttgtaaaatatggttgtcaaataagttgtcaccaaattggttgttca 51191958  T
Q  102 aataacac 109  Q
    ||||||||    
T  51191959 aataacac 51191966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 3024751 - 3024638
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||| |||||| |||||||||| ||       ||||||||| |||| ||||||||||||||||||| |||||  ||||||    
T  3024751 tttttactttatctctctattgctatggtttccgtgccaatatcaattttttctttgtaaaatatgattgtcaaataagttgtcaccaaattagttgttc 3024652  T
Q  101 aaataacacttctc 114  Q
    |||||||| |||||    
T  3024651 aaataacatttctc 3024638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 21340592 - 21340700
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||| |||||| |||| ||||| ||       ||| ||||| |||||||||||||||||||||||| |||||||||||||    
T  21340592 tttttactttatctctctattgctatggtttccgtgtcaataacatttttttctt-gtaaaatatggttgtcaaataagttgtcaccaaattgattgttc 21340690  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  21340691 aaataacact 21340700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 26837522 - 26837631
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||| | ||||  ||| ||||||||       ||||||||| |||||||||||||||||||||||| |||||| ||||||    
T  26837522 tttttactttatctctctattgctatagtttctgtgtcaataccacttttttctttgtaaaatatggttgtcaaataagttgtcaccaaattggttgttc 26837621  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  26837622 aaataacact 26837631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 46082122 - 46082008
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||| |||||| |||| ||||||||       ||||||||| ||| |||||||||||| || |||| |||||||||| ||    
T  46082122 tttttactttatctctctattgctatggtttccgtgtcaataccacttttttctttgtaaaatatagttgtcaaataaattatcaccaaattgattgctc 46082023  T
Q  101 aaataacacttctca 115  Q
    |||||||||| ||||    
T  46082022 aaataacactcctca 46082008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 1852952 - 1852843
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    ||||| |||| ||||| || |||| |||||| |||||||||||||       ||||||||| |||||||||||||||||||||||  |||||| || |||    
T  1852952 ttttttctttgtctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttgtcatcaaattggttattc 1852853  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  1852852 aaataacact 1852843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 53 - 113
Target Start/End: Original strand, 36494573 - 36494633
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaataacacttct 113  Q
    ||||||||| |||| ||||||||||||||||||| |||||| |||||||||||||||||||    
T  36494573 ctttgtaaattatgattgtcaaataagttgtcaccaaattggttgttcaaataacacttct 36494633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 36673732 - 36673627
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||| |||||| |||| |||||| |       ||||||||| ||||||||||||||||||| |||| |||||||||||||    
T  36673732 tttttactttatctctctattgctatggtttccgtgtcaatactacttttt-ctttgtaaattatggttgtcaaataagttatcaccaaattgattgttc 36673634  T
Q  101 aaataac 107  Q
    |||||||    
T  36673633 aaataac 36673627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 51286368 - 51286260
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||| ||||||||| || |||| |||||| ||||||||||| |       ||||||||| | |||||||||||||||||||||| |||||| ||||||    
T  51286368 tttttattttatctctctattgctatggtttccgtgccaatactacttttt-ctttgtaaattttggttgtcaaataagttgtcacaaaattggttgttc 51286270  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  51286269 aaataacact 51286260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 53 - 115
Target Start/End: Original strand, 34008301 - 34008363
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaataacacttctca 115  Q
    ||||||||| | | |||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  34008301 ctttgtaaattttagttgtcaaataagttgtcacaaaattgattgttcaaataacactactca 34008363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 58 - 116
Target Start/End: Original strand, 37178831 - 37178889
Alignment:
Q  58 taaagtatggttgtcaaataagttgtcactaaattgattgttcaaataacacttctcat 116  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||| ||| |||||    
T  37178831 taaaatatggttgtcaaataagttgtcaccaaattgattgttcaaataaaactcctcat 37178889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 47214278 - 47214385
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || || | |||||| ||||||||||| |       ||||||||| | |||||||||||||||||||||| |||||| ||||||    
T  47214278 tttttactttatctctctattgttatggtttccgtgccaatactacttttt-ctttgtaaattttggttgtcaaataagttgtcacaaaattggttgttc 47214376  T
Q  101 aaataacac 109  Q
    |||||||||    
T  47214377 aaataacac 47214385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 36779270 - 36779156
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||| || ||| |||| ||||| ||       ||||||||| |||| ||||||||||| || |||| |||||||||||||    
T  36779270 tttttactttatctctctattgctatgatttccgtgtcaatatcacttttttctttgtaaaatatgattgtcaaataaattatcaccaaattgattgttc 36779171  T
Q  101 aaataacacttctca 115  Q
    |||||||||| ||||    
T  36779170 aaataacactcctca 36779156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 902708 - 902826
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||| || ||| ||||| |||||||       ||||||||| |||| |||||||||||| | |||  |||||| ||||||    
T  902708 tttttactttatctctctattgctatgatttccgtgctaataccacttttttctttgtaaaatatgattgtcaaataagctatcatcaaattggttgttc 902807  T
Q  101 aaataacacttctcatata 119  Q
    |||||||||| ||| ||||    
T  902808 aaataacactcctcttata 902826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 53 - 110
Target Start/End: Original strand, 1790630 - 1790687
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaataacact 110  Q
    ||||||||| |||||||||||||||||||||||| |||||  || |||||||||||||    
T  1790630 ctttgtaaaatatggttgtcaaataagttgtcaccaaattagttattcaaataacact 1790687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 50328142 - 50328033
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||| |||||||||||| |||||||       ||||||||| ||||||||||  | |||||||||   || || ||||||    
T  50328142 tttttactttatctctctattgctttggttttcgtgcaaataccaactttttctttgtaaattatggttgtcccaaaagttgtcaaccaaatggttgttc 50328043  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  50328042 aaataacact 50328033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 52362552 - 52362669
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||| |||||||||||| |||||||       |||| |||| ||||||||||  | |||||||||   || || ||||||    
T  52362552 tttttactttatctctctattgctttggttttcgtgcaaataccaactttttctttataaattatggttgtcctaaaagttgtcaaccaaatggttgttc 52362651  T
Q  101 aaataacacttctcatat 118  Q
    |||||||||| |||||||    
T  52362652 aaataacactcctcatat 52362669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 13489732 - 13489847
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtc-actaaattgattgtt 99  Q
    |||||||||||||||| || |||| |||||||||||| |||||||       ||||||||| ||||||||||  | |||||||| || |||| | |||||    
T  13489732 tttttactttatctctctattgctttggttttcgtgcaaataccaactttttctttgtaaattatggttgtcccagaagttgtcaaccaaatag-ttgtt 13489830  T
Q  100 caaataacacttctcat 116  Q
    ||||||||||| |||||    
T  13489831 caaataacactcctcat 13489847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 48326038 - 48326156
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||| || ||||||| | |||||||       ||||||||| |||||||||| || |||||||||   || || ||||||    
T  48326038 tttttactttatctctctattgctttgattttcgtacaaataccaactttttctttgtaaattatggttgtccaa-aagttgtcaaccaaatggttgttc 48326136  T
Q  101 aaataacacttctcatatat 120  Q
    |||||||||| |||||||||    
T  48326137 aaataacactcctcatatat 48326156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 40316945 - 40316836
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||| |||||||||||| |||||||       |||| |||| ||||||||||  | |||||||||   || || ||||||    
T  40316945 tttttactttatctctctattgctttggttttcgtgcaaataccaactttttctttataaattatggttgtcctaaaagttgtcaaccaaatggttgttc 40316846  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  40316845 aaataacact 40316836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 53 - 109
Target Start/End: Original strand, 44632649 - 44632705
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaataacac 109  Q
    ||||||||| ||||||| |||||||||| ||||  |||||| |||||||||||||||    
T  44632649 ctttgtaaattatggttatcaaataagtcgtcatcaaattggttgttcaaataacac 44632705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 108
Target Start/End: Original strand, 16856569 - 16856624
Alignment:
Q  54 tttgtaaagtatggttgtcaaataagttgtc-actaaattgattgttcaaataaca 108  Q
    |||||||| |||||||||||||||||||||| | ||||||  ||||||||||||||    
T  16856569 tttgtaaattatggttgtcaaataagttgtcaattaaattagttgttcaaataaca 16856624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 46172408 - 46172301
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||| ||||||||| || |||| | ||||||||||||||||||       ||||||||| | | ||||| |||||| |||||||     |||||||||    
T  46172408 tttttattttatctctctattgctatagttttcgtgccaataccacttttttctttgtaaaatttagttgttaaataaattgtcac-----tgattgttc 46172314  T
Q  101 aaataacacttct 113  Q
    |||||||||||||    
T  46172313 aaataacacttct 46172301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 10890047 - 10889933
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtc-actaaattgattgtt 99  Q
    |||||||||||||||| || |||| || |||||||||  ||||||       ||||||||| ||||||||||| | |||||||| || |||| | |||||    
T  10890047 tttttactttatctctctattgctttgattttcgtgcacataccaactttttctttgtaaattatggttgtcacaaaagttgtcaaccaaatag-ttgtt 10889949  T
Q  100 caaataacacttctca 115  Q
    ||||||||||| ||||    
T  10889948 caaataacactcctca 10889933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 110
Target Start/End: Original strand, 16987074 - 16987116
Alignment:
Q  68 ttgtcaaataagttgtcactaaattgattgttcaaataacact 110  Q
    ||||||||||||||||||| ||||| ||| |||||||||||||    
T  16987074 ttgtcaaataagttgtcaccaaattaattcttcaaataacact 16987116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 53 - 110
Target Start/End: Complemental strand, 29147823 - 29147765
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtca-ctaaattgattgttcaaataacact 110  Q
    ||||||||| ||||||||||| |||| || ||| | |||||||||||||||||||||||    
T  29147823 ctttgtaaattatggttgtcacataaattatcaaccaaattgattgttcaaataacact 29147765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 53 - 115
Target Start/End: Complemental strand, 41507143 - 41507081
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaataacacttctca 115  Q
    ||||||||| ||| |||||||||||||||||||   || || ||||||||||||||| |||||    
T  41507143 ctttgtaaattatagttgtcaaataagttgtcaaccaaatggttgttcaaataacacatctca 41507081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 67 - 109
Target Start/End: Original strand, 49660316 - 49660358
Alignment:
Q  67 gttgtcaaataagttgtcactaaattgattgttcaaataacac 109  Q
    ||||||| | ||||||||||| |||||||||||||||||||||    
T  49660316 gttgtcacaaaagttgtcactcaattgattgttcaaataacac 49660358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 110
Target Start/End: Complemental strand, 33358107 - 33358050
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaataacact 110  Q
    ||||||||| ||||||||||| |||||||||||   || || ||||||||||||||||    
T  33358107 ctttgtaaattatggttgtcacataagttgtcaaccaaatggttgttcaaataacact 33358050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 19969563 - 19969490
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaa 74  Q
    |||||||||||||||| || |||| ||||||||||||  ||||||       ||||||||| ||||||||||||    
T  19969563 tttttactttatctctctattgctttggttttcgtgcacataccaacgttttctttgtaaattatggttgtcaa 19969490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 36577413 - 36577304
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||| || ||||||||| |||||||       |||| |||| ||||||||||  | |||||||||   || || ||||||    
T  36577413 tttttactttatctctttattgctttgattttcgtgcaaataccaactttttctttataaattatggttgtcctaaaagttgtcaaccaaatggttgttc 36577314  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  36577313 aaataacact 36577304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 53 - 109
Target Start/End: Complemental strand, 47398401 - 47398345
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaataacac 109  Q
    ||||||||| |||||||||| || ||||||||| |||| || ||| |||||||||||    
T  47398401 ctttgtaaattatggttgtctaaaaagttgtcattaaaatggttgctcaaataacac 47398345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 50781571 - 50781527
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaatacca 45  Q
    |||||||||||||||| || |||| |||||||||||| |||||||    
T  50781571 tttttactttatctctctattgctttggttttcgtgcaaatacca 50781527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 52714902 - 52714793
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || || | |||||||||||| | |||||       ||||||||| ||| ||||||  | ||||||||| | || || ||||||    
T  52714902 tttttactttatctctctattgttttggttttcgtgcaattaccaactttttctttgtaaattattgttgtcccaaaagttgtcaatcaaatggttgttc 52714803  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  52714802 aaataacact 52714793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 9e-31; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 30036795 - 30036682
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||| |||||| |||||||||||||       |||||||||||||| ||||||||||||||||||| |||||||||||||    
T  30036795 tttttactttatctctctaatgctatggtttccgtgccaataccatttttttctttgtaaagtatgattgtcaaataagttgtcaccaaattgattgttc 30036696  T
Q  101 aaataacacttctc 114  Q
    ||||||||||||||    
T  30036695 aaataacacttctc 30036682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 14986745 - 14986636
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||| |||||| |||||||||||||       |||||||||||||| ||||||||||||||||||| |||||| ||||||    
T  14986745 tttttactttatctctttattgctatggtttccgtgccaataccacttttttctttgtaaagtatgattgtcaaataagttgtcaccaaattggttgttc 14986646  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  14986645 aaataacact 14986636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 30152531 - 30152418
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||| |||||| ||| |||||||||        |||||||||||||||||||||||||||| |||| |||||||||||||    
T  30152531 tttttactttatctctctaatgctatggtttccgtaccaataccatttttttatttgtaaagtatggttgtcaaataagttatcaccaaattgattgttc 30152432  T
Q  101 aaataacacttctc 114  Q
    ||||||||||||||    
T  30152431 aaataacacttctc 30152418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 5327592 - 5327483
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| |  |||| |||||| |||| ||||||||       |||||||||||||||||||||||||||||||||| |||||| ||||||    
T  5327592 tttttactttatctctctcttgctatggtttccgtgtcaataccacttttttctttgtaaagtatggttgtcaaataagttgtcaccaaattggttgttc 5327493  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  5327492 aaataacact 5327483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 2075452 - 2075341
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || || | | |||| |||||||||||||       ||||||||| |||||||||||||||||||||||| |||||| ||||||    
T  2075452 tttttactttatctctctattgttatagtttccgtgccaataccacttttttctttgtaaattatggttgtcaaataagttgtcaccaaattggttgttc 2075353  T
Q  101 aaataacacttc 112  Q
    ||||||||||||    
T  2075352 aaataacacttc 2075341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 335133 - 335239
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||| |||||||||||||  |||| |||||| ||||||||||| |       ||||||||| |||| |||||||||||||||||||||||||||||||||    
T  335133 ttttaactttatctctat--tgctatggtttccgtgccaatactacttttttctttgtaaattatgattgtcaaataagttgtcactaaattgattgttc 335230  T
Q  101 aaataacac 109  Q
    |||||||||    
T  335231 aaataacac 335239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 3610962 - 3610853
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||| |||||| |||| ||||||||       ||||||||| ||||||| |||||||||||||||| |||||| ||||||    
T  3610962 tttttactttatctctctattgctatggtttccgtgtcaataccacttttttctttgtaaaatatggttatcaaataagttgtcaccaaattggttgttc 3610863  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  3610862 aaataacact 3610853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 11547530 - 11547421
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||| |||||| |||| ||||||||       ||||||||| ||||| |||||||||| ||||||| |||||||||||||    
T  11547530 tttttactttatctctctattgctatggtttccgtgtcaataccacttttttctttgtaaattatggctgtcaaataaattgtcaccaaattgattgttc 11547431  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  11547430 aaataacact 11547421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 34504090 - 34504199
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||| ||||||||||| || |||| |||||| |||| ||||||||       ||||||||| |||| ||||||||||||||||||| |||||| ||||||    
T  34504090 ttttcactttatctctctattgctatggtttccgtgtcaataccaattttttctttgtaaaatatgattgtcaaataagttgtcaccaaattggttgttc 34504189  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  34504190 aaataacact 34504199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 53 - 114
Target Start/End: Complemental strand, 2777266 - 2777205
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaataacacttctc 114  Q
    ||||||||| |||  |||||||||||||| |||| |||||||||||||||||||||||||||    
T  2777266 ctttgtaaaatataattgtcaaataagttatcaccaaattgattgttcaaataacacttctc 2777205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 53 - 110
Target Start/End: Complemental strand, 22341124 - 22341067
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaataacact 110  Q
    ||||||||| ||| |||||||||||||||||||| |||||| ||||||||||||||||    
T  22341124 ctttgtaaattattgttgtcaaataagttgtcaccaaattggttgttcaaataacact 22341067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 54 - 108
Target Start/End: Original strand, 576953 - 577007
Alignment:
Q  54 tttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaataaca 108  Q
    |||||||| ||||||||| ||||||||||||| |||||| |||||||||||||||    
T  576953 tttgtaaattatggttgttaaataagttgtcattaaattaattgttcaaataaca 577007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 32459517 - 32459408
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcact-aaattgattgtt 99  Q
    |||||||||||||||| || |||| |||||||||||| |||||||       ||||||||| ||||||||||  | ||||||||| | |||||| |||||    
T  32459517 tttttactttatctctctattgctttggttttcgtgcaaataccaactttttctttgtaaattatggttgtcctaaaagttgtcaatcaaattg-ttgtt 32459419  T
Q  100 caaataacact 110  Q
    |||||||||||    
T  32459418 caaataacact 32459408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 18141302 - 18141193
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||| || |||||||||  ||||||       ||||||||| ||||||||||| | |||||||||   || || ||||||    
T  18141302 tttttactttatctctctattgctttgattttcgtgcacataccaacttattctttgtaaattatggttgtcacaaaagttgtcaaccaaatggttgttc 18141203  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  18141202 aaataacact 18141193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 26832716 - 26832829
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || || | |||||||||||| |||||         ||| ||||| ||||||||||| ||||||||||| | || || ||||||    
T  26832716 tttttactttatctctctattgttttggttttcgtgcaaatacatagtttttcttcgtaaattatggttgtcacataagttgtcaatcaaatggttgttc 26832815  T
Q  101 aaataacacttctc 114  Q
    |||||| |||||||    
T  26832816 aaataagacttctc 26832829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 63 - 107
Target Start/End: Complemental strand, 27763405 - 27763361
Alignment:
Q  63 tatggttgtcaaataagttgtcactaaattgattgttcaaataac 107  Q
    |||||||||||||||| || |||| ||||||||||||||||||||    
T  27763405 tatggttgtcaaataaattttcaccaaattgattgttcaaataac 27763361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 35213562 - 35213453
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||| |||||||||||| |||||||       ||||||||| |||| |||||  | |||||||||   || || ||||||    
T  35213562 tttttactttatctctctattgctttggttttcgtgcaaataccaactttttctttgtaaattatgattgtcccaaaagttgtcaaccaaatggttgttc 35213463  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  35213462 aaataacact 35213453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 53 - 115
Target Start/End: Original strand, 3832585 - 3832647
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaataacacttctca 115  Q
    ||||||||| ||||||||||  ||||||||||| | || || |||||||||||||||| ||||    
T  3832585 ctttgtaaattatggttgtcccataagttgtcaatcaaatggttgttcaaataacactcctca 3832647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 754439 - 754369
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgt 71  Q
    |||||||||||||||| || |||| |||||||||||| |||||||       ||||||||| |||||||||    
T  754439 tttttactttatctctctattgctttggttttcgtgcaaataccaactttttctttgtaaattatggttgt 754369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 117
Target Start/End: Complemental strand, 2689014 - 2688949
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtca-ctaaattgattgttcaaataacacttctcata 117  Q
    |||| |||| ||||||||||| | ||||||||| | ||||||||||||||||||||| | ||||||    
T  2689014 ctttataaattatggttgtcacaaaagttgtcaaccaaattgattgttcaaataacattcctcata 2688949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 110
Target Start/End: Original strand, 13658953 - 13659010
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaataacact 110  Q
    ||||||||| ||||||||||||||| ||| |||  ||||| ||| |||||||||||||    
T  13658953 ctttgtaaattatggttgtcaaataggttttcatcaaattaattattcaaataacact 13659010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 124
Target Start/End: Original strand, 33656903 - 33656963
Alignment:
Q  63 tatggttgtcaaataagttgtcactaaattgattgttcaaataacacttctcatatattttt 124  Q
    |||||||||||||||| |||||| | || || ||||||||||||||| |||| |||||||||    
T  33656903 tatggttgtcaaataaattgtcaatcaaatggttgttcaaataacacatctc-tatattttt 33656963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 1369430 - 1369539
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||| || ||||||||| |||||||       ||||||||| ||||||||||  | || ||||||   || || ||||||    
T  1369430 tttttactttatctctctattgctttgattttcgtgcaaataccaactttttctttgtaaattatggttgtctcaaaaattgtcaaccaaatggttgttc 1369529  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  1369530 aaataacact 1369539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 20822869 - 20822825
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaatacca 45  Q
    |||||||||||||||| || |||| |||||||||||| |||||||    
T  20822869 tttttactttatctctctattgctttggttttcgtgcaaatacca 20822825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 53 - 109
Target Start/End: Original strand, 31749487 - 31749543
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaataacac 109  Q
    ||||||||| ||||||||||   |||||||||| | || ||||||||||||||||||    
T  31749487 ctttgtaaattatggttgtctcttaagttgtcaatcaaatgattgttcaaataacac 31749543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 2e-28; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 32843943 - 32843834
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||| |||||| |||||||||||||       |||||||||||||||||||||||||||||||||| |||||| ||||||    
T  32843943 tttttactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaagtatggttgtcaaataagttgtcaccaaattggttgttc 32843844  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  32843843 aaataacact 32843834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 7956008 - 7955894
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||| |||||| || ||||||||||       ||||||||| |||||||||||||||||||||||| |||||||||||||    
T  7956008 tttttactttatctctctattgctatggtttccgcgccaataccacttttttctttgtaaaatatggttgtcaaataagttgtcaccaaattgattgttc 7955909  T
Q  101 aaataacacttctca 115  Q
    |||||||||| ||||    
T  7955908 aaataacactcctca 7955894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 1633891 - 1633782
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||| ||||||  ||||||||||||       |||||||||||||||||||||||||||||||||| |||||| ||||||    
T  1633891 tttttactttatctctctattgctatggtttctgtgccaataccacttttttctttgtaaagtatggttgtcaaataagttgtcaccaaattggttgttc 1633792  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  1633791 aaataacact 1633782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 36110208 - 36110317
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || || | ||||||||||||||||||||       ||||||||| |||||||||||||||||||||||| |||||| ||||||    
T  36110208 tttttactttatctctctattgttatggttttcgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttgtcaccaaattggttgttc 36110307  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  36110308 aaataacact 36110317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 7 - 110
Target Start/End: Original strand, 34591340 - 34591443
Alignment:
Q  7 ctttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaataa 106  Q
    |||||||||| || |||| |||||| |||| ||||||||       |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  34591340 ctttatctctttattgctatggtttccgtgtcaataccacttttttctttgtaaagtatggttgtcaaataagttgtcaccaaattgattgttcaaataa 34591439  T
Q  107 cact 110  Q
    ||||    
T  34591440 cact 34591443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 5 - 110
Target Start/End: Original strand, 16966859 - 16966964
Alignment:
Q  5 tactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaat 104  Q
    |||||||||||| || |||| |||||| |||||||||||||       ||||||||||||||||||||||||||||| |||| |||||| ||||||||||    
T  16966859 tactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaagtatggttgtcaaataagttttcaccaaattggttgttcaaat 16966958  T
Q  105 aacact 110  Q
    ||||||    
T  16966959 aacact 16966964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 32847687 - 32847578
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||| ||| || || |||||||| |||| ||||||||       ||||||||||||||||||||||||||||| |||| |||||||||||||    
T  32847687 tttttactttatttctctattgttgtggtttccgtggcaataccacttttttctttgtaaagtatggttgtcaaataagttatcaccaaattgattgttc 32847588  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  32847587 aaataacact 32847578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 53 - 110
Target Start/End: Original strand, 35564411 - 35564468
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaataacact 110  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  35564411 ctttgtaaagtatggttgtcaaataagttgtcactaaattagttgttcaaataacact 35564468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 30136016 - 30135897
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaa-taagttgtcactaaattgattgtt 99  Q
    |||||||||||||||| || | || |||||| |||| ||||||||       ||||||||| ||||||||||||| ||||||||||| |||||| |||||    
T  30136016 tttttactttatctctttattactatggtttccgtgtcaataccacttctttctttgtaaaatatggttgtcaaaataagttgtcaccaaattggttgtt 30135917  T
Q  100 caaataacacttctcatata 119  Q
    ||||||||||| ||| ||||    
T  30135916 caaataacactcctcttata 30135897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 11017875 - 11017984
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || || | | |||| | |||||||||||       ||||||||| ||| |||||||||||||||||||| ||||| |||||||    
T  11017875 tttttactttatctctctattgttatcgtttccatgccaataccacttttttctttgtaaaatatagttgtcaaataagttgtcaccaaattaattgttc 11017974  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  11017975 aaataacact 11017984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 37783972 - 37783863
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || ||||  | ||| |||| ||||||||       ||||||||| |||||||||||||||||||||||| |||||| ||| ||    
T  37783972 tttttactttatctctctattgctaggatttccgtgtcaataccacctttttctttgtaaaatatggttgtcaaataagttgtcaccaaattggttgatc 37783873  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  37783872 aaataacact 37783863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 54 - 117
Target Start/End: Complemental strand, 6968181 - 6968118
Alignment:
Q  54 tttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaataacacttctcata 117  Q
    |||||||| ||||||||| || ||||||||||| ||||||||||||||||||||||| ||||||    
T  6968181 tttgtaaattatggttgtaaattaagttgtcaccaaattgattgttcaaataacactcctcata 6968118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 54 - 108
Target Start/End: Complemental strand, 33589179 - 33589125
Alignment:
Q  54 tttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaataaca 108  Q
    ||||||||||| | ||||||||||||||||||| |||||||||||||||||||||    
T  33589179 tttgtaaagtacgattgtcaaataagttgtcaccaaattgattgttcaaataaca 33589125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 7592919 - 7593029
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttg-taaagtatggttgtcaaataagttgtcactaaattgattgtt 99  Q
    |||||||||||||||| || |||| |||||| |||| ||||||||        |||  ||||||||| ||||||||||||||||||| | ||||||||||    
T  7592919 tttttactttatctctctattgctatggtttccgtgtcaataccatttattttttttataaagtatgattgtcaaataagttgtcaccatattgattgtt 7593018  T
Q  100 caaataacact 110  Q
    |||||||||||    
T  7593019 caaataacact 7593029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 53 - 110
Target Start/End: Original strand, 18651482 - 18651539
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaataacact 110  Q
    ||||||||| ||||||||||||||||||||| ||||||||| ||||| ||||||||||    
T  18651482 ctttgtaaattatggttgtcaaataagttgttactaaattggttgtttaaataacact 18651539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 53 - 121
Target Start/End: Complemental strand, 1871564 - 1871496
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaataacacttctcatatatt 121  Q
    ||||||||| ||||||||||||||||||||| |  |||||| |||||||||||||||| ||||| ||||    
T  1871564 ctttgtaaattatggttgtcaaataagttgtaatcaaattggttgttcaaataacactcctcatttatt 1871496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 53 - 116
Target Start/End: Complemental strand, 7586112 - 7586049
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaataacacttctcat 116  Q
    ||||||||| ||| |||||||||||||||||||  |||||| |||||||||||||||| |||||    
T  7586112 ctttgtaaattatagttgtcaaataagttgtcatgaaattggttgttcaaataacactcctcat 7586049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 45529247 - 45529167
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagtt 81  Q
    |||||||||||||||| || |||| |||||| |||||||||||||       ||||||||| |||||||||||||||||||    
T  45529247 tttttactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaataagtt 45529167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 6 - 110
Target Start/End: Original strand, 13971199 - 13971299
Alignment:
Q  6 actttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaata 105  Q
    |||||||||||||| |||| |||||| ||||||||||| |       ||||||||    ||||||||||||||||||| || |||||| |||||||||||    
T  13971199 actttatctctatattgctatggtttccgtgccaatactacttttttctttgtaa----tggttgtcaaataagttgttaccaaattggttgttcaaata 13971294  T
Q  106 acact 110  Q
    |||||    
T  13971295 acact 13971299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 41521038 - 41521151
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||  || |||| ||||||  ||| ||||||||       ||||||||| ||||||||| | ||||||| |||  |||||| ||||||    
T  41521038 tttttactttatctcgttattgctatggtttctgtgtcaataccactattttctttgtaaaatatggttgttatataagttatcatcaaattggttgttc 41521137  T
Q  101 aaataacacttctc 114  Q
    ||||||||||||||    
T  41521138 aaataacacttctc 41521151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 53 - 108
Target Start/End: Complemental strand, 11657950 - 11657895
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaataaca 108  Q
    ||||||||| |||| ||||||||||||||||||  |||||| ||||||||||||||    
T  11657950 ctttgtaaaatatgattgtcaaataagttgtcagcaaattggttgttcaaataaca 11657895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 53 - 110
Target Start/End: Complemental strand, 6991757 - 6991699
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtc-actaaattgattgttcaaataacact 110  Q
    ||||||||| ||||||||||| |||||||||| ||| ||||| ||||||||||||||||    
T  6991757 ctttgtaaaatatggttgtcatataagttgtcaactgaattgtttgttcaaataacact 6991699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 7478850 - 7478958
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    ||||||| |||||||| || |||| |||||| ||||||||||| |       ||||||||| |||| |||||||||| |||||||  |||||  ||||||    
T  7478850 tttttaccttatctctctattgctatggtttccgtgccaatactacttttt-ctttgtaaattatgattgtcaaataggttgtcaacaaattagttgttc 7478948  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  7478949 aaataacact 7478958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 110
Target Start/End: Original strand, 36531716 - 36531773
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaataacact 110  Q
    ||||||||| | || ||||||||||  || |||| |||||||||||||||||||||||    
T  36531716 ctttgtaaattttgattgtcaaatagattatcaccaaattgattgttcaaataacact 36531773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 53 - 112
Target Start/End: Complemental strand, 38708244 - 38708184
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtcact-aaattgattgttcaaataacacttc 112  Q
    ||||| ||| ||||||||||| |||| |||||| | |||||| ||||||||||||||||||    
T  38708244 ctttgcaaattatggttgtcacataaattgtcaatcaaattggttgttcaaataacacttc 38708184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 2e-28; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 13162989 - 13163098
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||| |||||| |||||||||||||       ||||||||| |||||||||||||||||||||||| |||||||||||||    
T  13162989 tttttactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttgtcaccaaattgattgttc 13163088  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  13163089 aaataacact 13163098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 19786080 - 19785971
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||| ||||||||||||||||||||       ||||||||| |||||||||||||||||||||||  |||||||||||||    
T  19786080 tttttactttatctctctattgctctggttttcgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttgtcatcaaattgattgttc 19785981  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  19785980 aaataacact 19785971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 39231729 - 39231615
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||| |||||| |||||||||||||       |||||||||||||||||||||||||||||||||| |||||  ||||||    
T  39231729 tttttactttatctctctattgctatggtttccgtgccaataccacctttttctttgtaaagtatggttgtcaaataagttgtcaccaaattagttgttc 39231630  T
Q  101 aaataacacttctca 115  Q
    |||||||||| ||||    
T  39231629 aaataacactcctca 39231615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 32815238 - 32815347
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||| ||||||  ||||||||||||       ||||||||| |||||||||||||||||||||||| |||||| ||||||    
T  32815238 tttttactttatctctctattgctatggtttctgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttgtcaccaaattggttgttc 32815337  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  32815338 aaataacact 32815347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 38779745 - 38779636
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    ||||||||| |||||| || |||| |||||| |||||||||||||       |||||||||||||||||||||||||||||||||  ||||||| | |||    
T  38779745 tttttacttcatctctctattgctatggtttccgtgccaataccacttttttctttgtaaagtatggttgtcaaataagttgtcatcaaattgactattc 38779646  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  38779645 aaataacact 38779636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 41402578 - 41402693
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    ||||| |||| ||||| || |||| |||||| |||||||||||||       ||||||||| ||||||||| |||||||||||||| |||||  ||||||    
T  41402578 ttttttctttgtctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgttaaataagttgtcaccaaattagttgttc 41402677  T
Q  101 aaataacacttctcat 116  Q
    ||||||||||||||||    
T  41402678 aaataacacttctcat 41402693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 29162977 - 29162868
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || || | |||||| |||||||||||||       ||||||||| |||  ||||||||||||||||||| |||||| ||||||    
T  29162977 tttttactttatctctctattgttatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaaataagttgtcaccaaattggttgttc 29162878  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  29162877 aaataacact 29162868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 37808765 - 37808656
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || || | || ||| |||||||||||||       ||||||||| ||||||||||||||| |||||||| |||||| ||||||    
T  37808765 tttttactttatctctctattgttatgctttccgtgccaataccacttttttctttgtaaaatatggttgtcaaatacgttgtcaccaaattggttgttc 37808666  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  37808665 aaataacact 37808656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 53 - 106
Target Start/End: Complemental strand, 26041269 - 26041216
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaataa 106  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  26041269 ctttgtaaattatggttgtcaaataagttgtcaccaaattgattgttcaaataa 26041216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 13906458 - 13906353
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || || | |||||| |||||||||||||       ||||||||| |||||||||||||||| || |||| ||||| |||||||    
T  13906458 tttttactttatctctctattgttatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaataaattatcaccaaattaattgttc 13906359  T
Q  101 aaataa 106  Q
    ||||||    
T  13906358 aaataa 13906353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 21023118 - 21023009
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || || | |||||| ||||  |||||||       ||||||||| |||||||||||||||| ||||||  |||||||||||||    
T  21023118 tttttactttatctctctattgttatggtttccgtgataataccacttttttctttgtaaaatatggttgtcaaataaattgtcatcaaattgattgttc 21023019  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  21023018 aaataacact 21023009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 40353334 - 40353439
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||| ||||||||| || |||| |||||| |||||||||||||       ||||||||| ||||||| ||||||||||| ||||  ||||||||||||    
T  40353334 tttttattttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttttcaaataagttatcacctaattgattgttc 40353433  T
Q  101 aaataa 106  Q
    ||||||    
T  40353434 aaataa 40353439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 53 - 115
Target Start/End: Complemental strand, 23048349 - 23048287
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaataacacttctca 115  Q
    ||||||||| ||||||||| |||||||||||||| |||||| |||||||||||||||| ||||    
T  23048349 ctttgtaaattatggttgtaaaataagttgtcaccaaattggttgttcaaataacactcctca 23048287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 21 - 106
Target Start/End: Complemental strand, 46773645 - 46773560
Alignment:
Q  21 tgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaataa 106  Q
    |||| |||||| |||||||||||||       |||| |||| |||||||||||||||||||||||| |||||||||||| ||||||    
T  46773645 tgctatggtttccgtgccaataccaattttttctttataaaatatggttgtcaaataagttgtcacgaaattgattgttgaaataa 46773560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 53 - 108
Target Start/End: Complemental strand, 27163609 - 27163554
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaataaca 108  Q
    ||||||||| |||||||||||||||| ||||||| |||||||||||| ||||||||    
T  27163609 ctttgtaaaatatggttgtcaaataaattgtcaccaaattgattgtttaaataaca 27163554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 47078252 - 47078144
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||| |||||| ||||||||||  |       ||||||||| | ||||||||||||||||||| || |||||| ||||||    
T  47078252 tttttactttatctctctattgctatggtttccgtgccaatattacttttt-ctttgtaaattttggttgtcaaataagttgttacaaaattggttgttc 47078154  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  47078153 aaataacact 47078144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 53 - 111
Target Start/End: Original strand, 29002728 - 29002786
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaataacactt 111  Q
    ||||||||| ||| ||||||||||||| |||||| |||||| |||||||||||||||||    
T  29002728 ctttgtaaaatatagttgtcaaataagctgtcaccaaattggttgttcaaataacactt 29002786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 53 - 110
Target Start/End: Complemental strand, 41666871 - 41666814
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaataacact 110  Q
    ||||||||| |||||||||||||||| || |||| |||||| ||||||||||||||||    
T  41666871 ctttgtaaaatatggttgtcaaataaattatcaccaaattggttgttcaaataacact 41666814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 39137222 - 39137331
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||| |||||||||||||| |||| |||||| ||| ||||||  |       ||||||||  ||||||||||||||||||| |||  |||||| ||||||    
T  39137222 ttttaactttatctctatattgctatggtttccgtaccaatattacttttttctttgtaagttatggttgtcaaataagttatcatcaaattggttgttc 39137321  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  39137322 aaataacact 39137331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 35452574 - 35452460
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtca-ctaaattgattgtt 99  Q
    |||||||||||||||| || |||| || ||| ||||| ||||||        |||| |||| ||||||||||| | ||||||||| | | ||||||||||    
T  35452574 tttttactttatctctctattgctttgatttccgtgcaaataccttctttttctttataaattatggttgtcacacaagttgtcaaccagattgattgtt 35452475  T
Q  100 caaataacacttctc 114  Q
    |||||||||||||||    
T  35452474 caaataacacttctc 35452460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 7817706 - 7817815
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||| || ||||||||| |||| |        ||||||||| ||||||||||| |||||||||||   || || ||||||    
T  7817706 tttttactttatctctctattgctttgattttcgtgcaaatatccactttttctttgtaaattatggttgtcacataagttgtcaaccaaatggttgttc 7817805  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  7817806 aaataacact 7817815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 11352975 - 11352866
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||| |||||||||||  |||||||       ||||||||| ||||||||||  | |||||||||   || || ||||||    
T  11352975 tttttactttatctctttattgctttggttttcgtgtaaataccaaatttttctttgtaaattatggttgtcccaaaagttgtcaaccaaatggttgttc 11352876  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  11352875 aaataacact 11352866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 28036814 - 28036923
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||| |||||||||||| |||||||       ||||||||| ||||||||||  | |||||||||   || || ||||||    
T  28036814 tttttactttatctctctattgctttggttttcgtgcaaataccaactttttctttgtaaattatggttgtcccaaaagttgtcaaccaaatggttgttc 28036913  T
Q  101 aaataacact 110  Q
    || |||||||    
T  28036914 aattaacact 28036923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 43573544 - 43573435
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||| |||||||||||| |||||||       |||| |||| ||||||||||  | || ||||||   || |||||||||    
T  43573544 tttttactttatctctctattgctttggttttcgtgcaaataccaattttttctttataaattatggttgtctcaaaaattgtcaaccaaatgattgttc 43573445  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  43573444 aaataacact 43573435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 53 - 105
Target Start/End: Original strand, 46148113 - 46148165
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaata 105  Q
    |||| |||| |||||||||||||||||||||||  |||||| |||||||||||    
T  46148113 ctttataaattatggttgtcaaataagttgtcatcaaattggttgttcaaata 46148165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 108
Target Start/End: Original strand, 39823930 - 39823985
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaataaca 108  Q
    ||||||||| ||||||||||||||||||||  || ||||| ||| |||||||||||    
T  39823930 ctttgtaaattatggttgtcaaataagttgctaccaaattaattattcaaataaca 39823985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 53 - 110
Target Start/End: Original strand, 4713695 - 4713753
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtc-actaaattgattgttcaaataacact 110  Q
    ||||||||| ||||||||||| |||||||||| || |||||| || |||||||||||||    
T  4713695 ctttgtaaattatggttgtcacataagttgtcaaccaaattggttattcaaataacact 4713753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 21822600 - 21822482
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtca-ctaaattgattgtt 99  Q
    |||||||||||||||| || | || || ||||||||  |||||||       ||||||||| |||||||||   | ||||||||| |||||| | |||||    
T  21822600 tttttactttatctctctattactttgattttcgtgtaaataccaattttttctttgtaaattatggttgttttaaaagttgtcaactaaatgg-ttgtt 21822502  T
Q  100 caaataacacttctcatata 119  Q
    ||||||||||||||||||||    
T  21822501 caaataacacttctcatata 21822482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 64 - 114
Target Start/End: Original strand, 33775073 - 33775123
Alignment:
Q  64 atggttgtcaaataagttgtcactaaattgattgttcaaataacacttctc 114  Q
    |||||||||||||||||||||| | ||  ||||||||||||||||| ||||    
T  33775073 atggttgtcaaataagttgtcaatcaaacgattgttcaaataacacatctc 33775123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 110
Target Start/End: Original strand, 3040234 - 3040275
Alignment:
Q  69 tgtcaaataagttgtcactaaattgattgttcaaataacact 110  Q
    ||||||||||||| |||  |||||||||||||||||||||||    
T  3040234 tgtcaaataagttatcatcaaattgattgttcaaataacact 3040275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 3343331 - 3343222
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||| |||||||||||| ||| |||       |||| |||| ||||||||||  | ||||||||| | || |  ||||||    
T  3343331 tttttactttatctctctattgctttggttttcgtgcaaatcccaactttttctttataaattatggttgtcttaaaagttgtcaatcaaatagttgttc 3343232  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  3343231 aaataacact 3343222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 2e-28; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 44677485 - 44677376
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||| |||||| |||||||||||||       |||||||||||||||||||||||||||||||||| |||||| ||||||    
T  44677485 tttttactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaagtatggttgtcaaataagttgtcaccaaattggttgttc 44677386  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  44677385 aaataacact 44677376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 32767746 - 32767855
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||| |||||| |||| |||| |||       |||||||||||||||||||||||||||||||||| |||||||||||||    
T  32767746 tttttactttatctctctattgctatggtttccgtgtcaatgccacttttttctttgtaaagtatggttgtcaaataagttgtcaccaaattgattgttc 32767845  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  32767846 aaataacact 32767855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 37508499 - 37508382
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||| |||||| |||||||||||||       ||||||||| |||||||||||||||||||||||  |||||| ||||||    
T  37508499 tttttactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttgtcatcaaattggttgttc 37508400  T
Q  101 aaataacacttctcatat 118  Q
    |||||||||| |||||||    
T  37508399 aaataacactcctcatat 37508382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 10206974 - 10206865
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| |  |||| |||||| |||||||||||||       ||||||||| |||||||||||||||||||||||| |||||| ||||||    
T  10206974 tttttactttatctctctgttgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttgtcaccaaattggttgttc 10206875  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  10206874 aaataacact 10206865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 36121891 - 36122000
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||| || |||| ||||||||||||       ||||||||| |||||||||||||||||||||||| |||||| ||||||    
T  36121891 tttttactttatctctctattgctatgatttttgtgccaataccacatttttctttgtaaaatatggttgtcaaataagttgtcaccaaattggttgttc 36121990  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  36121991 aaataacact 36122000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 54028012 - 54028127
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || || | || ||| |||| ||||||||       |||||||||||||||||||| ||||||||||||||||||||||| |||    
T  54028012 tttttactttatctctctattgttatgatttccgtgtcaataccacttttttctttgtaaagtatggttgtccaataagttgtcactaaattgattcttc 54028111  T
Q  101 aaataacacttctcat 116  Q
    |||||||||| |||||    
T  54028112 aaataacactcctcat 54028127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 54195410 - 54195524
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || | || | ||||||||| ||||| ||       ||||||||| |||||||||||||||||||||||| |||||| ||||||    
T  54195410 tttttactttatctctctattactatagttttcgtgtcaatatcacttttttctttgtaaattatggttgtcaaataagttgtcaccaaattggttgttc 54195509  T
Q  101 aaataacacttctca 115  Q
    |||||||||| ||||    
T  54195510 aaataacactcctca 54195524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 11633683 - 11633792
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||| |||||| |||||||||||||        |||||||| |||||||||||||||| || |||| |||||| ||||||    
T  11633683 tttttactttatctctctattgctatggtttccgtgccaataccacttttctttttgtaaaatatggttgtcaaataaattatcaccaaattggttgttc 11633782  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  11633783 aaataacact 11633792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 28419215 - 28419106
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || || | |||||| | |||||||||||       ||||||||| |||||||||||| ||||||||||| |||||| ||||||    
T  28419215 tttttactttatctctctattgttatggtttccatgccaataccacttttttctttgtaaaatatggttgtcaagtaagttgtcaccaaattggttgttc 28419116  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  28419115 aaataacact 28419106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 30909099 - 30909204
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || || | ||||||||||||||||||||       ||||||||| |||| ||||||||||||||||||| |||||  ||||||    
T  30909099 tttttactttatctctctattgttatggttttcgtgccaataccacttttttctttgtaaaatatgattgtcaaataagttgtcaccaaattagttgttc 30909198  T
Q  101 aaataa 106  Q
    ||||||    
T  30909199 aaataa 30909204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 43905043 - 43905152
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || || | ||||||  ||| ||||||||       ||||||||| ||||||||||||||||||| ||||||||||| ||||||    
T  43905043 tttttactttatctctctattgttatggtttctgtgtcaataccacttttttctttgtaaaatatggttgtcaaataagttttcactaaattggttgttc 43905142  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  43905143 aaataacact 43905152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 54773754 - 54773645
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| |  |||| |||||| |||| ||||||||       |||||||||||||||||||||||||||||||||| |||||| || |||    
T  54773754 tttttactttatctctctcttgctatggtttccgtgtcaataccacttttttctttgtaaagtatggttgtcaaataagttgtcaccaaattggttattc 54773655  T
Q  101 aaataacact 110  Q
    | ||||||||    
T  54773654 atataacact 54773645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 53 - 110
Target Start/End: Complemental strand, 35201489 - 35201432
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaataacact 110  Q
    ||||||||| |||| ||||||||||||||||||| |||||||||||||||||||||||    
T  35201489 ctttgtaaattatgattgtcaaataagttgtcaccaaattgattgttcaaataacact 35201432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 53 - 110
Target Start/End: Complemental strand, 39671046 - 39670989
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaataacact 110  Q
    ||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||    
T  39671046 ctttgtaaaatatggttgtcaaataagttgtcaccaaattggttgttcaaataacact 39670989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 53 - 109
Target Start/End: Complemental strand, 29634021 - 29633965
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaataacac 109  Q
    ||||||||| |||||||||||||||| |||||||||||||| |||||||||||||||    
T  29634021 ctttgtaaaatatggttgtcaaataaattgtcactaaattggttgttcaaataacac 29633965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 49363252 - 49363139
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || || | |||||| |||||||||||||       |||| |||| ||| |||||||||||| || || | |||||||||||||    
T  49363252 tttttactttatctctctattgatatggtttccgtgccaataccacttttttctttataaaatatagttgtcaaataaattatccccaaattgattgttc 49363153  T
Q  101 aaataacacttctc 114  Q
    ||||||||||||||    
T  49363152 aaataacacttctc 49363139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 22371261 - 22371376
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||| ||||||   |||||||||||       ||||||| |||||| ||||||||||| ||||||| |||||  ||||||    
T  22371261 tttttactttatctctctattgctatggtttctttgccaataccaattttttctttgtagagtatgattgtcaaataaattgtcaccaaattagttgttc 22371360  T
Q  101 aaataacacttctcat 116  Q
    |||||||||| |||||    
T  22371361 aaataacactcctcat 22371376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 53 - 114
Target Start/End: Complemental strand, 30863022 - 30862961
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaataacacttctc 114  Q
    |||| |||| || ||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  30863022 ctttataaattagggttgtcaaataaattgtcaccaaattgattgttcaaataacacttctc 30862961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 39020160 - 39020052
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtc-aaataagttgtcactaaattgattgtt 99  Q
    |||||||||||||||| || |||| |||||| |||| ||||||||       ||||||||| |||| ||||| |||||||||||||  |||||| |||||    
T  39020160 tttttactttatctctctattgctatggtttccgtgtcaataccacttttttctttgtaaaatatgattgtcaaaataagttgtcatcaaattggttgtt 39020061  T
Q  100 caaataaca 108  Q
    |||||||||    
T  39020060 caaataaca 39020052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 49417645 - 49417753
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||| ||||||||| || |||| |||||| ||||||||||| |       ||||||||| | ||||||| |||||||||||||| |||||| ||||||    
T  49417645 tttttattttatctctctattgctatggtttccgtgccaatactacttttt-ctttgtaaattttggttgttaaataagttgtcacaaaattggttgttc 49417743  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  49417744 aaataacact 49417753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 53 - 116
Target Start/End: Complemental strand, 51973317 - 51973254
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaataacacttctcat 116  Q
    ||||||||| |||||||||||||||| ||||||| |||||  |||||||||||||||| |||||    
T  51973317 ctttgtaaattatggttgtcaaataaattgtcaccaaattagttgttcaaataacactcctcat 51973254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 390879 - 390986
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||| | |||| |||| ||||||||       ||||||||| |||| ||||||||||||||||||  || ||| ||||||    
T  390879 tttttactttatctctctattgctatagtttccgtgtcaataccacttttttctttgtaaaatatgattgtcaaataagttgtcatcaacttggttgttc 390978  T
Q  101 aaataaca 108  Q
    ||||||||    
T  390979 aaataaca 390986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 26996440 - 26996501
Alignment:
Q  56 tgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaataacacttctcata 117  Q
    |||||| |||||||||||||||| ||||||| |||||  |||||||||||||||| ||||||    
T  26996440 tgtaaaatatggttgtcaaataaattgtcaccaaatttgttgttcaaataacactcctcata 26996501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 33375930 - 33376044
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggt-----tgtcaaataagttgtcactaaattgat 95  Q
    |||||||||||||||| || |||| | |||| |||||||||||||       ||||||||||||  ||     | |||||||||||||||| ||||||||    
T  33375930 tttttactttatctctctattgctatagtttccgtgccaataccacttttatctttgtaaagtactgtataattttcaaataagttgtcaccaaattgat 33376029  T
Q  96 tgttcaaataacact 110  Q
    |||||||||||||||    
T  33376030 tgttcaaataacact 33376044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 53 - 110
Target Start/End: Original strand, 55013124 - 55013181
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaataacact 110  Q
    ||||||||| |||| ||||||||||| ||||||| |||||| ||||||||||||||||    
T  55013124 ctttgtaaaatatgattgtcaaataaattgtcaccaaattggttgttcaaataacact 55013181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 46253692 - 46253804
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||| |||||||||||| |||||||       ||||||||| ||||||||||  | ||||||||| | |  || ||||||    
T  46253692 tttttactttatctctctattgctttggttttcgtgcaaataccaacattttctttgtaaattatggttgtcccaaaagttgtcaatca--tggttgttc 46253789  T
Q  101 aaataacacttctca 115  Q
    |||||||||| ||||    
T  46253790 aaataacactcctca 46253804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 55400069 - 55400188
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||| |||||||||||| |||||||       |||| |||| ||||||||||  | |||||||||   || || ||||||    
T  55400069 tttttactttatctctctattgctttggttttcgtgcaaataccaattttttctttataaattatggttgtcctaaaagttgtcaaccaaatggttgttc 55400168  T
Q  101 aaataacacttctcatatat 120  Q
    |||||||||| ||| |||||    
T  55400169 aaataacactcctcttatat 55400188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 53 - 110
Target Start/End: Complemental strand, 46982852 - 46982795
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaataacact 110  Q
    ||||||||| ||| |||||||||||| ||||||| |||||  ||||||||||||||||    
T  46982852 ctttgtaaaatatagttgtcaaataaattgtcaccaaattagttgttcaaataacact 46982795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 53 - 108
Target Start/End: Complemental strand, 33795674 - 33795618
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtc-actaaattgattgttcaaataaca 108  Q
    ||||||||| |||||||||||  ||||||||| ||||||||| ||||||||||||||    
T  33795674 ctttgtaaattatggttgtcacgtaagttgtcaactaaattggttgttcaaataaca 33795618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 39697223 - 39697114
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||| |||||||||||| |||| ||       ||||||||| ||||||||||  | ||||||||| | || |  ||||||    
T  39697223 tttttactttatctctctattgctttggttttcgtgcaaatatcaattttttctttgtaaattatggttgtcccaaaagttgtcaatcaaatagttgttc 39697124  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  39697123 aaataacact 39697114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 51465915 - 51465806
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||| || ||||||||| |||||||       ||||||||| ||||||||||  | |||||||||   || || ||||||    
T  51465915 tttttactttatctctctattgctttgattttcgtgcaaataccaactttttctttgtaaattatggttgtcccaaaagttgtcaaccaaatggttgttc 51465816  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  51465815 aaataacact 51465806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 108
Target Start/End: Complemental strand, 13934552 - 13934497
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaataaca 108  Q
    ||||||||| ||||||| |||||||| ||||||  |||||| ||||||||||||||    
T  13934552 ctttgtaaattatggttatcaaataaattgtcatcaaattggttgttcaaataaca 13934497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 53 - 110
Target Start/End: Complemental strand, 9158822 - 9158764
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtc-actaaattgattgttcaaataacact 110  Q
    ||||||||| ||||||||||| |||||||||| || |||||  ||||||||||||||||    
T  9158822 ctttgtaaattatggttgtcacataagttgtcaaccaaattagttgttcaaataacact 9158764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 52485543 - 52485585
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaatac 43  Q
    |||||||||||||||| || |||| ||||||||||||||||||    
T  52485543 tttttactttatctctctattgctttggttttcgtgccaatac 52485585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 114
Target Start/End: Original strand, 53718142 - 53718191
Alignment:
Q  65 tggttgtcaaataagttgtcactaaattgattgttcaaataacacttctc 114  Q
    ||||||||||||||||||||||||||    ||||||||||||||| ||||    
T  53718142 tggttgtcaaataagttgtcactaaaaaagttgttcaaataacacatctc 53718191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 53 - 108
Target Start/End: Complemental strand, 346541 - 346485
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtca-ctaaattgattgttcaaataaca 108  Q
    |||| |||| ||||||| ||| ||||||||||| ||||||| |||||||||||||||    
T  346541 ctttttaaattatggttatcacataagttgtcaactaaattaattgttcaaataaca 346485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 24482964 - 24482920
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaatacca 45  Q
    ||||||||||||||||||| || | |||||||||||| |||||||    
T  24482964 tttttactttatctctatattgttttggttttcgtgcaaatacca 24482920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 8e-28; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 5042318 - 5042434
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || | || |||||| |||||||||||||       ||||||||| ||||||||||||||||||| |||| |||||||||||||    
T  5042318 tttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttatcaccaaattgattgttc 5042417  T
Q  101 aaataacacttctcata 117  Q
    |||||||||||||||||    
T  5042418 aaataacacttctcata 5042434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 33620678 - 33620794
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||| |||||| |||| ||||||||       ||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  33620678 tttttactttatctctctattgctatggtttccgtgtcaataccacttttttctttgtaaagtatggttgttaaataagttgtcactaaattggttgttc 33620777  T
Q  101 aaataacacttctcata 117  Q
    |||||||| | ||||||    
T  33620778 aaataacattcctcata 33620794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 4430937 - 4430828
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||| ||||||||||| ||||||||       |||||||||||||| ||||||||||||||||||| |||||| ||||||    
T  4430937 tttttactttatctctctattgctatggttttcgtgtcaataccacttttttctttgtaaagtatgcttgtcaaataagttgtcaccaaattggttgttc 4430838  T
Q  101 aaataacact 110  Q
    ||||| ||||    
T  4430837 aaatagcact 4430828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 53 - 117
Target Start/End: Complemental strand, 21064175 - 21064111
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaataacacttctcata 117  Q
    ||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  21064175 ctttgtaaaatatgggtgtcaaataagttgtcaccaaattgattgttcaaataacactcctcata 21064111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 35099006 - 35098897
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||| | |||| |||| ||||||||       ||||||||| |||| ||||||||||||||||||| |||||| ||||||    
T  35099006 tttttactttatctctctattgctatagtttccgtgtcaataccacttttttctttgtaaattatgattgtcaaataagttgtcaccaaattggttgttc 35098907  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  35098906 aaataacact 35098897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 2688987 - 2688880
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||| |||||| ||||||||||| |       ||||||||| ||| |||||||||||| ||||||| |||||| ||||||    
T  2688987 tttttactttatctctctattgctatggtttccgtgccaatacaacttttttctttgtaaaatatagttgtcaaataatttgtcaccaaattggttgttc 2688888  T
Q  101 aaataaca 108  Q
    ||||||||    
T  2688887 aaataaca 2688880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 53 - 115
Target Start/End: Complemental strand, 39088818 - 39088756
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaataacacttctca 115  Q
    ||||||||| ||| ||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  39088818 ctttgtaaaatatcgttgtcaaataagttgtcactaaattggttgttcaaataacactactca 39088756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 8267821 - 8267712
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    ||||||||||||||||  | || | |||||| |||| ||||||||       |||||||||| ||| ||||||||||||||||||| |||||| ||||||    
T  8267821 tttttactttatctctccattgttatggtttccgtgtcaataccacttttttctttgtaaagcatgattgtcaaataagttgtcaccaaattggttgttc 8267722  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  8267721 aaataacact 8267712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 16437565 - 16437456
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    ||||||| |||||||| || |  | |||||| |||||||||||||       |||||||||||||| ||||||||||| ||||||| |||||| ||||||    
T  16437565 tttttaccttatctctctattcatatggtttccgtgccaataccacttttttctttgtaaagtatgattgtcaaataaattgtcaccaaattggttgttc 16437466  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  16437465 aaataacact 16437456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 53 - 111
Target Start/End: Original strand, 2224913 - 2224971
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaataacactt 111  Q
    ||||||||| |||||||||||||||||||||||  |||||| |||||||||||||||||    
T  2224913 ctttgtaaattatggttgtcaaataagttgtcatcaaattggttgttcaaataacactt 2224971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 53 - 114
Target Start/End: Original strand, 42267467 - 42267528
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaataacacttctc 114  Q
    |||| |||| |||||||||||||||||||||||  |||||| ||||||||||||||||||||    
T  42267467 ctttataaattatggttgtcaaataagttgtcatcaaattggttgttcaaataacacttctc 42267528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 53 - 116
Target Start/End: Complemental strand, 17402871 - 17402808
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaataacacttctcat 116  Q
    |||| |||| |||||| ||||||||||||||||| |||||| ||||||||||||||||| ||||    
T  17402871 ctttataaattatggtagtcaaataagttgtcaccaaattggttgttcaaataacacttttcat 17402808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 5821613 - 5821503
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnn-ctttgtaaagtatggttgtcaaataagttgtcactaaattgattgtt 99  Q
    |||||||||||||||| ||  ||| |||||| |||||||||||||        |||||||||||||| || |||||||| ||||||  ||||||||| ||    
T  5821613 tttttactttatctctctatagctatggtttccgtgccaataccactttttttctttgtaaagtatgattatcaaataaattgtcatcaaattgattatt 5821514  T
Q  100 caaataacact 110  Q
    |||||||||||    
T  5821513 caaataacact 5821503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 15267854 - 15267959
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || || | ||||||||||| ||||| ||       ||||||||||||||||| |||||||| || |||  |||||| ||||||    
T  15267854 tttttactttatctctctattgttatggttttcgtgtcaatatcacttttttctttgtaaagtatggttatcaaataaattatcatcaaattggttgttc 15267953  T
Q  101 aaataa 106  Q
    ||||||    
T  15267954 aaataa 15267959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 15953046 - 15952937
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||| || ||||||||| ||||||        ||||||||| ||||||||||| |||||||||||   || || ||||||    
T  15953046 tttttactttatctctctattgctttgattttcgtgcaaatacccactttttctttgtaaattatggttgtcacataagttgtcaaccaaatggttgttc 15952947  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  15952946 aaataacact 15952937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 43441808 - 43441917
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||| |||||||||||| |||||||       ||||||||| ||||||||||  | |||||||||   || || ||||||    
T  43441808 tttttactttatctctctattgctttggttttcgtgcaaataccaattttttctttgtaaattatggttgtcttaaaagttgtcaaccaaatggttgttc 43441907  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  43441908 aaataacact 43441917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 18842322 - 18842250
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtca 73  Q
    |||||||||||||||| || |||| ||||||||||||||||||||       ||||||||| |||||||||||    
T  18842322 tttttactttatctctctattgctatggttttcgtgccaataccacttttttctttgtaaaatatggttgtca 18842250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 8675434 - 8675319
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||| || ||||||||| |||||||       ||||||||| ||||||||||  | |||||||||   || || ||||||    
T  8675434 tttttactttatctctctattgctttgattttcgtgcaaataccaactttttctttgtaaattatggttgtcccaaaagttgtcaaccaaatggttgttc 8675335  T
Q  101 aaataacacttctcat 116  Q
    |||||||||| |||||    
T  8675334 aaataacactcctcat 8675319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 53 - 110
Target Start/End: Complemental strand, 23126290 - 23126233
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaataacact 110  Q
    |||||||||||||  ||||||||||||||||||  |||||  ||||||||||||||||    
T  23126290 ctttgtaaagtataattgtcaaataagttgtcatcaaattagttgttcaaataacact 23126233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 10649505 - 10649614
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||| || |||||||||  ||||||       ||||||||| ||||||||||| | |||||||||   || || ||||||    
T  10649505 tttttactttatctctctattgctttgattttcgtgcacataccaactttttctttgtaaattatggttgtcacaaaagttgtcaaccaaatggttgttc 10649604  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  10649605 aaataacact 10649614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 53 - 117
Target Start/End: Original strand, 39628911 - 39628975
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaataacacttctcata 117  Q
    |||| |||| |||| ||||||||||| ||||||| |||||  |||||||||||||||| ||||||    
T  39628911 ctttataaattatgattgtcaaataaattgtcacaaaattatttgttcaaataacactcctcata 39628975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 41175707 - 41175598
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||| || | ||||||| ||||||        ||||||||| ||||||||||| |||||||||||   || || ||||||    
T  41175707 tttttactttatctctctattgctttgatcttcgtgcaaatacccactttttctttgtaaattatggttgtcacataagttgtcaaccaaatggttgttc 41175608  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  41175607 aaataacact 41175598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 37700530 - 37700638
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    ||||||| |||||||| || |||| |||||| ||||||||||| |       ||||||||| ||||||||||||||| |||||||  |||||  |||||     
T  37700530 tttttaccttatctctctattgctatggtttccgtgccaatactacttttt-ctttgtaaattatggttgtcaaataggttgtcaacaaattagttgttt 37700628  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  37700629 aaataacact 37700638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 34124691 - 34124806
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||| ||| || |||| |||||||||||  |||||||       ||||||||| ||||||||||  | || |||||| | || || ||||||    
T  34124691 tttttactttatttctctattgctttggttttcgtgtaaataccaactttttctttgtaaattatggttgtcttaaaaattgtcaattaaatggttgttc 34124790  T
Q  101 aaataacacttctcat 116  Q
    |||||||||| |||||    
T  34124791 aaataacactcctcat 34124806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 6517782 - 6517826
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaatacca 45  Q
    |||||||||||||||| || |||| |||||||||||| |||||||    
T  6517782 tttttactttatctctctattgctttggttttcgtgcaaatacca 6517826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 38704198 - 38704085
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||| | | || |||| || ||||||||| |||||||       ||||||||| ||||||||||  | ||||||| | | || || ||||||    
T  38704198 tttttactttatttttctattgctttgattttcgtgcaaataccaactttttctttgtaaattatggttgtcccaaaagttgttaatcaaatggttgttc 38704099  T
Q  101 aaataacacttctc 114  Q
    ||||||||||||||    
T  38704098 aaataacacttctc 38704085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 77 - 186
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || || | ||||||||||||||||||||       ||||||||| |||||||||||||||||||||||| |||||| ||||||    
T  77 tttttactttatctctctattgttatggttttcgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttgtcaccaaattggttgttc 176  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  177 aaataacact 186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 5e-26; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 433920 - 434029
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||| || ||| |||| ||||||||       |||||||||||||||||||||||||||||||||| |||||||||||||    
T  433920 tttttactttatctctctattgctatgatttccgtgtcaataccacttttttctttgtaaagtatggttgtcaaataagttgtcacaaaattgattgttc 434019  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  434020 aaataacact 434029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 18177010 - 18177119
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    ||||| |||||||||| || |||| |||||| |||||||||| ||       ||||||||| |||||||||||||||||||||||| |||||||||||||    
T  18177010 ttttttctttatctctctattgctatggtttccgtgccaatatcacttttttctttgtaaaatatggttgtcaaataagttgtcaccaaattgattgttc 18177109  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  18177110 aaataacact 18177119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 29051654 - 29051547
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||| |||||||  |||| |||||| |||||||||||||       ||||||||||||||||||||||||||||| |||| |||||| ||||||    
T  29051654 tttttactttctctctat--tgctatggtttccgtgccaataccacttttttctttgtaaagtatggttgtcaaataagttatcaccaaattggttgttc 29051557  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  29051556 aaataacact 29051547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 53 - 109
Target Start/End: Original strand, 17779504 - 17779560
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaataacac 109  Q
    |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  17779504 ctttgtaaagtatggttgtcaaataagttgtcaccaaattggttgttcaaataacac 17779560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 35705565 - 35705672
Alignment:
Q  2 ttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttca 101  Q
    ||||||||||||||| || |||| ||||||||||| |||||| |       ||||||||| ||||||||| |||||| ||||||| ||||||||||||||    
T  35705565 ttttactttatctctttattgctatggttttcgtgtcaatactacttttt-ctttgtaaattatggttgttaaataaattgtcaccaaattgattgttca 35705663  T
Q  102 aataacact 110  Q
    |||||||||    
T  35705664 aataacact 35705672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 9634437 - 9634324
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    ||||||||||||||||||| || | |||||||||||| |||||||       ||||||||| |||||||||  || |||||||||   || |||||||||    
T  9634437 tttttactttatctctatattgttttggttttcgtgcaaataccaactttttctttgtaaattatggttgttcaaaaagttgtcaaccaaatgattgttc 9634338  T
Q  101 aaataacacttctc 114  Q
    ||||||||||||||    
T  9634337 aaataacacttctc 9634324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 41569397 - 41569292
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||| |||||| ||| |||||||||       ||||||||| ||||||||||||||||||| |||  |||||| ||||||    
T  41569397 tttttactttatctctctattgctatggtttccgtaccaataccacttttttctttgtaaaatatggttgtcaaataagttatcatcaaattggttgttc 41569298  T
Q  101 aaataa 106  Q
    ||||||    
T  41569297 aaataa 41569292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 53 - 110
Target Start/End: Complemental strand, 670421 - 670364
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaataacact 110  Q
    ||||||||| |||||||||||||||||||||||  |||||| ||||||||||||||||    
T  670421 ctttgtaaaatatggttgtcaaataagttgtcatcaaattggttgttcaaataacact 670364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 53 - 110
Target Start/End: Original strand, 7552679 - 7552736
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaataacact 110  Q
    ||||||||| |||| ||||||||||| ||||||| |||||||||||||||||||||||    
T  7552679 ctttgtaaaatatgattgtcaaataaattgtcaccaaattgattgttcaaataacact 7552736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 53 - 103
Target Start/End: Complemental strand, 5200175 - 5200125
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaa 103  Q
    ||||||||| |||||||||||||||||||||||| ||||| ||||||||||    
T  5200175 ctttgtaaattatggttgtcaaataagttgtcaccaaattaattgttcaaa 5200125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 68 - 114
Target Start/End: Complemental strand, 29684594 - 29684548
Alignment:
Q  68 ttgtcaaataagttgtcactaaattgattgttcaaataacacttctc 114  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||    
T  29684594 ttgtcaaataagttgtcatcaaattgattgttcaaataacacttctc 29684548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 53 - 110
Target Start/End: Original strand, 28679438 - 28679495
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaataacact 110  Q
    |||| |||| ||||||||||||||||||||| || |||||| ||||||||||||||||    
T  28679438 ctttataaattatggttgtcaaataagttgtgaccaaattggttgttcaaataacact 28679495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 53 - 110
Target Start/End: Original strand, 31389669 - 31389726
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaataacact 110  Q
    ||||||||  |||||||||||||||||||||||  |||||| ||||||||||||||||    
T  31389669 ctttgtaagttatggttgtcaaataagttgtcatcaaattggttgttcaaataacact 31389726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 4952481 - 4952372
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||| |||||||||||||||||| |       ||||||||| |||  || |||||||| || |||  ||||||||||||     
T  4952481 tttttactttatctctctattgctatggttttcgtgccaatacaatttttttctttgtaaaatatatttatcaaataaattatcatcaaattgattgttt 4952382  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  4952381 aaataacact 4952372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 53 - 110
Target Start/End: Original strand, 4753282 - 4753339
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaataacact 110  Q
    |||| |||| ||||||||||||||||||||||| ||||||  ||||| ||||||||||    
T  4753282 ctttataaattatggttgtcaaataagttgtcattaaattagttgtttaaataacact 4753339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 4758640 - 4758531
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||| ||||||||| || |||| || ||| |||||||||| ||       |||| ||||||||| || |||||||| || |||| ||||||||||||     
T  4758640 tttttattttatctctctattgctatgatttccgtgccaatatcacttttttctttataaagtatgattatcaaataaattatcaccaaattgattgttg 4758541  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  4758540 aaataacact 4758531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 32869896 - 32870005
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||| |||||||||||| |||||||       ||||||||| ||||||||||  | || ||||||   || || ||||||    
T  32869896 tttttactttatctctttattgctttggttttcgtgcaaataccaattttttctttgtaaattatggttgtcccaaaaattgtcaaccaaatggttgttc 32869995  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  32869996 aaataacact 32870005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 116
Target Start/End: Complemental strand, 14233667 - 14233604
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaataacacttctcat 116  Q
    ||||||||| ||||||||||   ||||||||||  ||| || ||||||||||||||||||||||    
T  14233667 ctttgtaaattatggttgtcttgtaagttgtcaacaaaatggttgttcaaataacacttctcat 14233604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 53 - 115
Target Start/End: Complemental strand, 2464199 - 2464137
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaataacacttctca 115  Q
    ||||||||  ||||||||||||||||||| |||  |||||| ||||| |||||||||| ||||    
T  2464199 ctttgtaagttatggttgtcaaataagttttcatcaaattggttgtttaaataacactcctca 2464137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 53 - 114
Target Start/End: Complemental strand, 10833597 - 10833535
Alignment:
Q  53 ctttgtaaagta-tggttgtcaaataagttgtcactaaattgattgttcaaataacacttctc 114  Q
    ||||||||| || ||||||||| | ||||||||||| ||||| ||||||||||||||| ||||    
T  10833597 ctttgtaaattagtggttgtcacaaaagttgtcactcaattggttgttcaaataacacatctc 10833535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 110
Target Start/End: Original strand, 6941065 - 6941118
Alignment:
Q  57 gtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaataacact 110  Q
    ||||| |||| |||||||||||||| |||  |||||| ||||||||||||||||    
T  6941065 gtaaattatgattgtcaaataagttatcatcaaattggttgttcaaataacact 6941118  T

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Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 114
Target Start/End: Complemental strand, 42223901 - 42223840
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaataacacttctc 114  Q
    ||||||||| |||  |||| |||||| || |||| |||||| ||||||||||||||||||||    
T  42223901 ctttgtaaaatataattgttaaataaattatcaccaaattggttgttcaaataacacttctc 42223840  T

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Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 6170700 - 6170744
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaatacca 45  Q
    |||||||||||||||| || |||| |||||||||||| |||||||    
T  6170700 tttttactttatctctctattgctttggttttcgtgcaaatacca 6170744  T

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Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 6999069 - 6999025
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaatacca 45  Q
    |||||||||||||||| || |||| |||||||||||| |||||||    
T  6999069 tttttactttatctctctattgctttggttttcgtgcaaatacca 6999025  T

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Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 53 - 113
Target Start/End: Complemental strand, 15245708 - 15245649
Alignment:
Q  53 ctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttcaaataacacttct 113  Q
    ||||||||| |||| |||||  |||||||||||  |||||| |||||||||||||||||||    
T  15245708 ctttgtaaattatgattgtctcataagttgtcaagaaattg-ttgttcaaataacacttct 15245649  T

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Target: scaffold0449 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 9273 - 9396
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||||||| || |||| |  ||| |||||||||||||       |||| |||| ||||||||||||||||||||| |  |||||| ||||||    
T  9273 tttttactttatctctctattgctataatttccgtgccaataccacttttttctttataaaatatggttgtcaaataagttgtgatcaaattggttgttc 9372  T
Q  101 aaataacacttctcatatattttt 124  Q
    ||||||||||  |||||| |||||    
T  9373 aaataacactcttcatattttttt 9396  T

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Target: scaffold0687 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0687
Description:

Target: scaffold0687; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 2267 - 2377
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttg-taaagtatggttgtcaaataagttgtcactaaattgattgtt 99  Q
    |||||||||||||||| || |||| |||||| |||| ||||||||        |||  ||||||||| ||||||||||||||||||| | ||||||||||    
T  2267 tttttactttatctctctattgctatggtttccgtgtcaataccatttattttttttataaagtatgattgtcaaataagttgtcaccatattgattgtt 2366  T
Q  100 caaataacact 110  Q
    |||||||||||    
T  2367 caaataacact 2377  T

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Target: scaffold0014 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 122901 - 123008
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtcactaaattgattgttc 100  Q
    |||||||||||| ||| || |||| |||||| |||||||||||||        |||||||| |||||||||||| |||||| |||| ||||||||| |||    
T  122901 tttttactttatttctctattgctatggtttccgtgccaataccaatttttt-tttgtaaaatatggttgtcaa-taagttatcaccaaattgatttttc 122998  T
Q  101 aaataacact 110  Q
    ||||||||||    
T  122999 aaataacact 123008  T

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Target: scaffold0136 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 38495 - 38604
Alignment:
Q  1 tttttactttatctctatagtgctgtggttttcgtgccaataccannnnnnnctttgtaaagtatggttgtcaaataagttgtc-actaaattgattgtt 99  Q
    |||||||||||||||| || |||| |||||||||||| |||||||       ||||||||| ||| ||||||  | |||||||| |||||| || |||||    
T  38495 tttttactttatctctctattgctttggttttcgtgcgaataccaactttttctttgtaaattatagttgtcccaaaagttgtcaactaaa-tggttgtt 38593  T
Q  100 caaataacact 110  Q
    |||||||||||    
T  38594 caaataacact 38604  T

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