View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2222_high_6 (Length: 237)
Name: NF2222_high_6
Description: NF2222
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2222_high_6 |
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Alignment Details
Target: chr1 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 15 - 230
Target Start/End: Original strand, 38306298 - 38306513
Alignment:
| Q |
15 |
ttattcttggtgatgaaaaatgaagattatatactggctaatctgggattttgttcccatgttaatgacccaattttaacttaaaatgaaatccttgaat |
114 |
Q |
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| T |
38306298 |
ttattcttggtgatgaaaaatgaagattatatactggctaatctgggattttgttcccatgttaatgacccaattttaacttaaaatgaaatccttgaat |
38306397 |
T |
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| Q |
115 |
attaccattgatagatataatataaacttcagtgattcaagttaaagctgccaaaaggccgatacattgttgaagtgctcccttcaggattcagtgattc |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38306398 |
attaccattgatagatataatataaacttcagtgattcaagttaaagctgccaaaaggccgatacattgttgaagtgctcccttcaggattcagtgattc |
38306497 |
T |
|
| Q |
215 |
atcaagatgttgaagg |
230 |
Q |
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|||||||||||||||| |
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| T |
38306498 |
atcaagatgttgaagg |
38306513 |
T |
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