View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2224_low_9 (Length: 321)
Name: NF2224_low_9
Description: NF2224
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2224_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 19 - 308
Target Start/End: Complemental strand, 48142938 - 48142654
Alignment:
| Q |
19 |
cctacattcaattcaccaacttattgcaacacatcaattcataaaaagtgattataatggatggtaatcttgtattttattgaattaatcatttatcctt |
118 |
Q |
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| T |
48142938 |
cctacattcaattcaccaacttattgcaacacatcaattcataaaaagtgattataatggatggtaatcttgtattttattgaattaatcatttatcctt |
48142839 |
T |
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| Q |
119 |
tattgtgattaattgtgaacaaaagtaaagctcttagtacaacgaaccttgtaacatgggaccaaaccaattcactacaaccatttctgatctgcatgca |
218 |
Q |
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| T |
48142838 |
tattgtgattaattgtgaacaaaagtaaagctcttagtacaacgaactttgtaacatgggaccaaaccaattcaccacaaccatttctgatctgcatgc- |
48142740 |
T |
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| Q |
219 |
atataatgaaacacatcatagcatgaagattcagccagcacatcatgaatctgaatattgttatgcatgactgagcaactctgaacattc |
308 |
Q |
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| T |
48142739 |
----aatgaaacacatcatagcatgaagagtcagccagcacatcatgaatttgaatattgttatgcatgactgagcaactctgaacattc |
48142654 |
T |
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