View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2225-3-Insertion-10 (Length: 811)

Name: NF2225-3-Insertion-10
Description: NF2225-3
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2225-3-Insertion-10
NF2225-3-Insertion-10
[»] chr1 (22 HSPs)
chr1 (220-703)||(12540793-12541275)
chr1 (201-342)||(12532769-12532914)
chr1 (77-152)||(12532927-12533002)
chr1 (90-153)||(12535404-12535467)
chr1 (89-152)||(6326682-6326745)
chr1 (89-156)||(14508739-14508806)
chr1 (560-675)||(12534973-12535092)
chr1 (261-375)||(12535197-12535311)
chr1 (214-308)||(24621571-24621665)
chr1 (214-306)||(23787210-23787302)
chr1 (81-152)||(12540645-12540716)
chr1 (752-811)||(12541275-12541334)
chr1 (568-619)||(47569740-47569791)
chr1 (260-309)||(12538581-12538630)
chr1 (568-632)||(28239767-28239831)
chr1 (87-134)||(4872623-4872670)
chr1 (685-728)||(12531936-12531979)
chr1 (89-155)||(14470549-14470615)
chr1 (78-156)||(28239151-28239229)
chr1 (572-618)||(14508386-14508432)
chr1 (89-135)||(28326411-28326457)
chr1 (89-154)||(14507267-14507332)
[»] chr6 (3 HSPs)
chr6 (214-363)||(384373-384522)
chr6 (89-156)||(384619-384686)
chr6 (575-634)||(384134-384193)
[»] chr2 (4 HSPs)
chr2 (351-464)||(36007875-36007987)
chr2 (89-152)||(9066378-9066441)
chr2 (89-155)||(9068561-9068627)
chr2 (568-610)||(16375795-16375837)
[»] chr5 (1 HSPs)
chr5 (89-156)||(1717979-1718046)
[»] chr3 (1 HSPs)
chr3 (88-155)||(47924841-47924908)


Alignment Details
Target: chr1 (Bit Score: 178; Significance: 1e-95; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 220 - 703
Target Start/End: Original strand, 12540793 - 12541275
Alignment:
Q  220 gttacagaacaagaggtgaaagctgttaaaagagcagcagctgtgctgataaaacgcggtgtcaaacctgatcgtgctggttatcaatccatgaggggtg 319  Q
    ||||||||||||||||||| ||||| |||||||||||  ||||| |||||||||||||||||||||||||||| |||| ||| ||||||| ||   ||||    
T  12540793 gttacagaacaagaggtgacagctgctaaaagagcagttgctgttctgataaaacgcggtgtcaaacctgatcttgctagttgtcaatccgtggttggtg 12540892  T
Q  320 gactgttcaaaggtgaaagagttaaggttgctagaaatgtggaagagttgagtttgtcattttccaatctttttcttggaa--cat-attactgaggtta 416  Q
    |||| | ||| |||| || |||||| ||| | |||||  |||||||||||||||||  ||||||   |  |||||| | ||  ||| |||||| ||||||    
T  12540893 gactatacaatggtggaacagttaaagttacaagaaagatggaagagttgagtttgagattttctgtttgttttctggaaaatcattattacttaggtta 12540992  T
Q  417 attattatgattatatttatttcaagtgtgttcttgtttgaccttagcatgcctgataaaaataataatttggtgctagctgtacaatacagaaatagtg 516  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||| | |||||||| ||||      |||  |||||||||| |||  ||||||  |    
T  12540993 attattatgattatatttatttcatgtgtgttcttgcttgaccttagctttcctgataataata------tgggtctagctgtaccatattgaaataagg 12541086  T
Q  517 atggatgttgcaaaggaaggacagaaggagctactt---gcctattgaatattctagattacatgctttctagttttctaatttaaggaccatgcttctg 613  Q
    ||||||  | |||||||||||| ||||||||||| |   |||  | ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  12541087 atggatccttcaaaggaaggacggaaggagctacgtcctgccggtggaatattgtagattacatgctttctagttttttaatttaaggaccatgcttctg 12541186  T
Q  614 cttttactttcacttctatagctttgcttccaagtgtgtgtactggaaaataataatgttttaattaatgctattctaatttgatcatgt 703  Q
    |||||||||||||||||| | ||||||||||||||||||| |||| ||||||||||||  ||||||||||  ||||||||||| ||||||    
T  12541187 cttttactttcacttctacatctttgcttccaagtgtgtgcactgcaaaataataatg-cttaattaatgtaattctaatttgttcatgt 12541275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 201 - 342
Target Start/End: Complemental strand, 12532914 - 12532769
Alignment:
Q  201 aaaaaacatcagt--actttagttacagaacaagaggtgaaagctgttaaaa--gagcagcagctgtgctgataaaacgcggtgtcaaacctgatcgtgc 296  Q
    |||||||||||||  |||||||||| ||||||||||||||||  || |||||  |||||| ||||||||||||||||||||||||||||||| ||| |||    
T  12532914 aaaaaacatcagtgtactttagttaaagaacaagaggtgaaaagtgctaaaaaagagcagtagctgtgctgataaaacgcggtgtcaaacctaatcttgc 12532815  T
Q  297 tggttatcaatccatgaggggtggactgttcaaaggtgaaagagtt 342  Q
    | ||||||||||| |||| ||||| |||| |||||||| |||||||    
T  12532814 tagttatcaatccgtgagtggtggcctgtccaaaggtggaagagtt 12532769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 77 - 152
Target Start/End: Complemental strand, 12533002 - 12532927
Alignment:
Q  77 ccacatatagctatctaatctatggctattgcatcaacagtcaatttaaacaagcaattgccttgtttaaagaatt 152  Q
    ||||||||| |  ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  12533002 ccacatataaccctctaatctatggctattacatcaacggtcaatttaaacaagcaattgccttgtttaaagaatt 12532927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 90 - 153
Target Start/End: Complemental strand, 12535467 - 12535404
Alignment:
Q  90 tctaatctatggctattgcatcaacagtcaatttaaacaagcaattgccttgtttaaagaattg 153  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||| |||||| |||||||    
T  12535467 tctaatctatggctattgcatcaccggtcaatttaaacaagcaattgccatgtttagagaattg 12535404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 89 - 152
Target Start/End: Complemental strand, 6326745 - 6326682
Alignment:
Q  89 atctaatctatggctattgcatcaacagtcaatttaaacaagcaattgccttgtttaaagaatt 152  Q
    |||||||||||||||||||||||  | |||||||| ||||||||||||||||||||||| ||||    
T  6326745 atctaatctatggctattgcatcctcggtcaatttgaacaagcaattgccttgtttaaaaaatt 6326682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 89 - 156
Target Start/End: Complemental strand, 14508806 - 14508739
Alignment:
Q  89 atctaatctatggctattgcatcaacagtcaatttaaacaagcaattgccttgtttaaagaattggag 156  Q
    ||||||||||||| |||||||||  | |||||||||||||||||||||||||||||| | ||||||||    
T  14508806 atctaatctatggttattgcatcgtcggtcaatttaaacaagcaattgccttgtttagaaaattggag 14508739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 560 - 675
Target Start/End: Complemental strand, 12535092 - 12534973
Alignment:
Q  560 gaatattctagattacatgctttctagttttctaatttaaggaccatgcttctgcttttactttcacttcta----tagctttgcttccaagtgtgtgta 655  Q
    ||||||| |||| ||| |||||||||||||||||||| |||||| ||||||||| |||||||  || |||||    ||  |||||||||||||||||| |    
T  12535092 gaatattgtagactacttgctttctagttttctaattaaaggactatgcttctgtttttactcgcatttctatatgtaagtttgcttccaagtgtgtgca 12534993  T
Q  656 ctggaaaataataatgtttt 675  Q
    || ||||||||  |||||||    
T  12534992 ctagaaaataacgatgtttt 12534973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 261 - 375
Target Start/End: Complemental strand, 12535311 - 12535197
Alignment:
Q  261 tgtgctgataaaacgcggtgtcaaacctgatcgtgctggttatcaatccatgaggggtggactgttcaaaggtgaaagagttaaggttgctagaaatgtg 360  Q
    ||||||||||||||| |||||| ||||| |||  ||| | ||||||||  ||   |||||||| | |||||||| ||||||||||||||| ||||| |||    
T  12535311 tgtgctgataaaacgtggtgtccaacctcatctcgctagctatcaatctgtggttggtggactatacaaaggtggaagagttaaggttgcaagaaaagtg 12535212  T
Q  361 gaagagttgagtttg 375  Q
    |||||| ||||||||    
T  12535211 gaagagctgagtttg 12535197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 214 - 308
Target Start/End: Complemental strand, 24621665 - 24621571
Alignment:
Q  214 actttagttacagaacaagaggtgaaagctgttaaaagagcagcagctgtgctgataaaacgcggtgtcaaacctgatcgtgctggttatcaatc 308  Q
    ||||||||||| ||||||||||||||| |||||||||| |||||| || || ||||||||   |||||||||||| ||  |||| ||||||||||    
T  24621665 actttagttaccgaacaagaggtgaaatctgttaaaagtgcagcaactttgatgataaaagctggtgtcaaacctaatgttgcttgttatcaatc 24621571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 214 - 306
Target Start/End: Original strand, 23787210 - 23787302
Alignment:
Q  214 actttagttacagaacaagaggtgaaagctgttaaaagagcagcagctgtgctgataaaacgcggtgtcaaacctgatcgtgctggttatcaa 306  Q
    ||||||||||| ||||||||||||||| |||||||||| |||||| || || ||||||||   |||||||||||| ||  |||| ||||||||    
T  23787210 actttagttaccgaacaagaggtgaaatctgttaaaagtgcagcaactttggtgataaaagctggtgtcaaacctaatgttgcttgttatcaa 23787302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 81 - 152
Target Start/End: Original strand, 12540645 - 12540716
Alignment:
Q  81 atatagctatctaatctatggctattgcatcaacagtcaatttaaacaagcaattgccttgtttaaagaatt 152  Q
    |||| ||| |||| ||||||||||||||||||   |||||||||| ||||||||||||||||||| ||||||    
T  12540645 atattgctgtctagtctatggctattgcatcactggtcaatttaagcaagcaattgccttgtttagagaatt 12540716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 752 - 811
Target Start/End: Original strand, 12541275 - 12541334
Alignment:
Q  752 tgtttcttgttttatattttctcttcaataatgccttatgattgtcttgacttgtgacat 811  Q
    |||||||||||||||||||||||||  || ||||||||| ||||||||| ||||||||||    
T  12541275 tgtttcttgttttatattttctctttgattatgccttatcattgtcttgccttgtgacat 12541334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 568 - 619
Target Start/End: Original strand, 47569740 - 47569791
Alignment:
Q  568 tagattacatgctttctagttttctaatttaaggaccatgcttctgctttta 619  Q
    |||||||||||||||||||||||||||||||||||| ||| || ||||||||    
T  47569740 tagattacatgctttctagttttctaatttaaggactatgtttttgctttta 47569791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 260 - 309
Target Start/End: Complemental strand, 12538630 - 12538581
Alignment:
Q  260 ctgtgctgataaaacgcggtgtcaaacctgatcgtgctggttatcaatcc 309  Q
    |||||| |||||||||||||||||||||||||| |||| |||||||||||    
T  12538630 ctgtgcagataaaacgcggtgtcaaacctgatcttgctagttatcaatcc 12538581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 568 - 632
Target Start/End: Original strand, 28239767 - 28239831
Alignment:
Q  568 tagattacatgctttctagttttctaatttaaggaccatgcttctgcttttactttcacttctat 632  Q
    |||||||||||||||||||||| |||||||||||||  || || |||||||| || |||||||||    
T  28239767 tagattacatgctttctagtttgctaatttaaggactttgtttttgcttttaattgcacttctat 28239831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 134
Target Start/End: Original strand, 4872623 - 4872670
Alignment:
Q  87 ctatctaatctatggctattgcatcaacagtcaatttaaacaagcaat 134  Q
    |||||||||||||||||||||||||  | |||||||||||||||||||    
T  4872623 ctatctaatctatggctattgcatcctcggtcaatttaaacaagcaat 4872670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 685 - 728
Target Start/End: Complemental strand, 12531979 - 12531936
Alignment:
Q  685 tattctaatttgatcatgtctgcgtatttggcccatatatgttc 728  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||    
T  12531979 tattctaatttgatcgtgtctgcgtatttggccgatatatgttc 12531936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 155
Target Start/End: Complemental strand, 14470615 - 14470549
Alignment:
Q  89 atctaatctatggctattgcatcaacagtcaatttaaacaagcaattgccttgtttaaagaattgga 155  Q
    ||||||||| ||| | ||||||||   ||||||||||| |||||||||||||||||| |||||||||    
T  14470615 atctaatctttggttgttgcatcattggtcaatttaaaaaagcaattgccttgtttagagaattgga 14470549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 156
Target Start/End: Original strand, 28239151 - 28239229
Alignment:
Q  78 cacatatagctatctaatctatggctattgcatcaacagtcaatttaaacaagcaattgccttgtttaaagaattggag 156  Q
    |||||||||  ||||| ||||||| |||||||||  | ||||||||||||| ||||||| ||| |||| ||||||||||    
T  28239151 cacatatagtcatctagtctatggttattgcatcctcggtcaatttaaacaggcaattgacttctttatagaattggag 28239229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 572 - 618
Target Start/End: Complemental strand, 14508432 - 14508386
Alignment:
Q  572 ttacatgctttctagttttctaatttaaggaccatgcttctgctttt 618  Q
    |||||||||||||| |||||||||| |||||| |||||| |||||||    
T  14508432 ttacatgctttctatttttctaattaaaggactatgcttttgctttt 14508386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 89 - 135
Target Start/End: Original strand, 28326411 - 28326457
Alignment:
Q  89 atctaatctatggctattgcatcaacagtcaatttaaacaagcaatt 135  Q
    ||||||||| ||||||||| |||| | ||||||||||||||||||||    
T  28326411 atctaatctttggctattgtatcatcggtcaatttaaacaagcaatt 28326457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 154
Target Start/End: Complemental strand, 14507332 - 14507267
Alignment:
Q  89 atctaatctatggctattgcatcaacagtcaatttaaacaagcaattgccttgtttaaagaattgg 154  Q
    ||||||||| ||||| |||||||    |||||||| || |||||||||||||||||| ||||||||    
T  14507332 atctaatctttggctgttgcatcgttggtcaatttgaaaaagcaattgccttgtttagagaattgg 14507267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 74; Significance: 2e-33; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 214 - 363
Target Start/End: Complemental strand, 384522 - 384373
Alignment:
Q  214 actttagttacagaacaagaggtgaaagctgttaaaagagcagcagctgtgctgataaaacgcggtgtcaaacctgatcgtgctggttatcaatccatga 313  Q
    ||||||||||||||||||||||| ||| ||| ||||||||| | |||||||||||| |||||||||||||||||| ||| ||||| || ||| ||  |||    
T  384522 actttagttacagaacaagaggtcaaatctgctaaaagagccgtagctgtgctgattaaacgcggtgtcaaacctaatcttgctgcttgtcagtctgtga 384423  T
Q  314 ggggtggactgttcaaaggtgaaagagttaaggttgctagaaatgtggaa 363  Q
      ||||||||||||||||||| |||||||||| |||| ||||| ||||||    
T  384422 ttggtggactgttcaaaggtggaagagttaagattgcaagaaaggtggaa 384373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 89 - 156
Target Start/End: Complemental strand, 384686 - 384619
Alignment:
Q  89 atctaatctatggctattgcatcaacagtcaatttaaacaagcaattgccttgtttaaagaattggag 156  Q
    |||||||||||| | |||||||||   |||||||||||||||||||||||||||||||||||||||||    
T  384686 atctaatctatgtccattgcatcactcgtcaatttaaacaagcaattgccttgtttaaagaattggag 384619  T

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Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 575 - 634
Target Start/End: Complemental strand, 384193 - 384134
Alignment:
Q  575 catgctttctagttttctaatttaaggaccatgcttctgcttttactttcacttctatag 634  Q
    |||||||||||||||||||||||| | || ||||||||||||||| || |||||||||||    
T  384193 catgctttctagttttctaatttatgcactatgcttctgcttttagttgcacttctatag 384134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 9e-20; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 351 - 464
Target Start/End: Complemental strand, 36007987 - 36007875
Alignment:
Q  351 tagaaatgtggaagagttgagtttgtcattttccaatctttttcttggaacat-attactgaggttaattattatgattatatttatttcaagtgtgttc 449  Q
    |||||| ||||||||||||||||||  |||||||  | | ||||| |||| || ||||||||||||||||||| ||||||||||||||||||| ||||||    
T  36007987 tagaaaggtggaagagttgagtttgagattttccgtt-tgtttct-ggaaaatcattactgaggttaattattttgattatatttatttcaagggtgttc 36007890  T
Q  450 ttgtttgaccttagc 464  Q
    ||| |||||||||||    
T  36007889 ttgcttgaccttagc 36007875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 89 - 152
Target Start/End: Original strand, 9066378 - 9066441
Alignment:
Q  89 atctaatctatggctattgcatcaacagtcaatttaaacaagcaattgccttgtttaaagaatt 152  Q
    ||||||||||||| ||||| |||  | |||||||||||| ||||||||||||||||| ||||||    
T  9066378 atctaatctatggttattgtatcgtcggtcaatttaaaccagcaattgccttgtttagagaatt 9066441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 155
Target Start/End: Original strand, 9068561 - 9068627
Alignment:
Q  89 atctaatctatggctattgcatcaacagtcaatttaaacaagcaattgccttgtttaaagaattgga 155  Q
    |||||||||||||||||||||||    |||||||||||||||   |||||||||||| |||||||||    
T  9068561 atctaatctatggctattgcatcgttggtcaatttaaacaagttgttgccttgtttagagaattgga 9068627  T

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Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 568 - 610
Target Start/End: Original strand, 16375795 - 16375837
Alignment:
Q  568 tagattacatgctttctagttttctaatttaaggaccatgctt 610  Q
    ||||||||||||||| ||||||||||||| ||||| |||||||    
T  16375795 tagattacatgctttgtagttttctaattaaaggatcatgctt 16375837  T

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Target: chr5 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 89 - 156
Target Start/End: Original strand, 1717979 - 1718046
Alignment:
Q  89 atctaatctatggctattgcatcaacagtcaatttaaacaagcaattgccttgtttaaagaattggag 156  Q
    ||||||||||||| |||||||||    |||||||||||||||||||||||||||||| | ||||||||    
T  1717979 atctaatctatggttattgcatcgttggtcaatttaaacaagcaattgccttgtttagaaaattggag 1718046  T

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Target: chr3 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 88 - 155
Target Start/End: Complemental strand, 47924908 - 47924841
Alignment:
Q  88 tatctaatctatggctattgcatcaacagtcaatttaaacaagcaattgccttgtttaaagaattgga 155  Q
    ||||||||| ||||||||||||||| | || ||||||||||||| ||||||||| ||| |||||||||    
T  47924908 tatctaatcaatggctattgcatcatcggtgaatttaaacaagcgattgccttgcttagagaattgga 47924841  T

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