View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2225-3-Insertion-18 (Length: 337)
Name: NF2225-3-Insertion-18
Description: NF2225-3
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2225-3-Insertion-18 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 302; Significance: 1e-170; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 7 - 337
Target Start/End: Complemental strand, 42805165 - 42804835
Alignment:
| Q |
7 |
aaagtttaatttgacttttctccctatatatcctgcatggcctacttgatcaagacgaaggtgctattcagttaataggcttcccttcccacgtaagcat |
106 |
Q |
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| T |
42805165 |
aaagtttaatttgacttttctccctatatatcctccatggcctacttgatcaagacgaaggtgctattcagttaataggcttcccttcccacgtaagcat |
42805066 |
T |
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| Q |
107 |
atgcgctgacaatggcaagaaatcaggatgccacctaaagttgtaaacnnnnnnnttgaatgtaatttgatgggattttgaagtgaaggaaagtaaaagt |
206 |
Q |
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| T |
42805065 |
atgcgctgacaatggcaagaaatcaggatgccacctaaagttgtaaacaaaaaaattgaatgtaatttgatgggattttgaagtgaaggaaagtaaaagt |
42804966 |
T |
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| Q |
207 |
gagtatgagatgcttttttcaatttggagtaagtgtcaaaccttcctttcatggaggcttgctatgagtagaaggaagaccaagtaggataggggcaatg |
306 |
Q |
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| T |
42804965 |
gagtatgagatgcttttttcaatttggagtaagtgtgaaaccttcctttcatggaggcttgctatgagtagaaggaagaccaagtaggataggggcaatg |
42804866 |
T |
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| Q |
307 |
ggaccttatagaagggccattaccattagta |
337 |
Q |
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| T |
42804865 |
ggaccttatagaagggccattaccattagta |
42804835 |
T |
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