View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2225-Insertion-19 (Length: 590)
Name: NF2225-Insertion-19
Description: NF2225
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2225-Insertion-19 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 549; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 549; E-Value: 0
Query Start/End: Original strand, 6 - 590
Target Start/End: Original strand, 41022842 - 41023426
Alignment:
| Q |
6 |
cataatgtgcatgcaaattgtcagcagaaagactcttattgacactaatatctgcagcaccgaaaacttgcaactcattgctaaaagtggccacaggcaa |
105 |
Q |
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| T |
41022842 |
cataatgtgcatgcaaattgtcagcagaaagactcttattgacactaatatctgcagcaccaaaaacttgcaactcattgctaaaagtggccacaggcaa |
41022941 |
T |
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| Q |
106 |
atctttgattttttgagctgaagaactactataagagcaactttccccatctctatgaattgctttgaggagcatttgatgctttttatgagataaaact |
205 |
Q |
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| T |
41022942 |
atctttgattttttgagctgaagaactactataagagcaactttccccatctctatgaagtgctttgaggagcatttgatgctttttatgagataaaact |
41023041 |
T |
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| Q |
206 |
ttcacaccttggtccttcacggtcaatttattttgctcagaatcaacgtcttcctgtctcatacttgactcagaatccttcaacttgaaaaccttcaaac |
305 |
Q |
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| T |
41023042 |
ttcacaccttggtccttcacggtcaatttattttgctcagaatcaacttcttcctgtctcatacttgactcagaatccttcaacttgaaaaccttcaaac |
41023141 |
T |
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| Q |
306 |
ttttttcactactaacatggacattaattggtgaatttctttcaaaagtctccaacttttttacatttttaccatcttccaagtcctgcgaactgcaggg |
405 |
Q |
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| T |
41023142 |
ttttttcactactaacatggacattaattggtgaatttctttcaaaagtctccaacttttttacatttttacaatcttccaagtcctgtgaactgcaggg |
41023241 |
T |
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| Q |
406 |
aaatttacttggcgccgaatcagctgtcctgcactgctgttcttttctcattactctcatgacatgtttcaactttctctttatttcaccaaatgcaaaa |
505 |
Q |
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| T |
41023242 |
aaatttacttggcgccgaatcagctgtcctgcactgcttttcttttctccttactctcatgacatgtttcaactttctctttatttcaccaaacgcaaaa |
41023341 |
T |
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| Q |
506 |
tttgaagacttgatattttgagcattgccagtgctagtttcagcaaaatgtttcacattatttgtatcatgcttcaaaactacta |
590 |
Q |
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| T |
41023342 |
tttgaagacttgatattttgagcattgccagtgctagtgtcagcaaaatgtttcacattatttgtatcatgcttcaaaactacta |
41023426 |
T |
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