View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2225_low_4 (Length: 353)

Name: NF2225_low_4
Description: NF2225
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2225_low_4
NF2225_low_4
[»] chr3 (12 HSPs)
chr3 (41-337)||(20502185-20502494)
chr3 (286-335)||(41028962-41029011)
chr3 (286-335)||(16790199-16790248)
chr3 (300-336)||(26808397-26808433)
chr3 (289-335)||(38462194-38462240)
chr3 (298-331)||(28842972-28843005)
chr3 (299-332)||(33307694-33307727)
chr3 (286-335)||(41724121-41724170)
chr3 (286-335)||(43116539-43116588)
chr3 (298-335)||(48528500-48528537)
chr3 (300-332)||(27792796-27792828)
chr3 (297-329)||(44374761-44374793)
[»] chr6 (15 HSPs)
chr6 (286-335)||(2514612-2514661)
chr6 (287-335)||(32578061-32578109)
chr6 (293-335)||(29249391-29249433)
chr6 (286-334)||(264280-264329)
chr6 (288-332)||(4248870-4248914)
chr6 (300-335)||(31668796-31668831)
chr6 (297-335)||(5899272-5899310)
chr6 (286-332)||(32386213-32386259)
chr6 (286-335)||(10452471-10452520)
chr6 (286-330)||(1904730-1904774)
chr6 (286-330)||(1908963-1909007)
chr6 (298-334)||(7148589-7148625)
chr6 (297-333)||(8470101-8470137)
chr6 (286-334)||(9027487-9027535)
chr6 (299-335)||(24774681-24774717)
[»] chr5 (24 HSPs)
chr5 (286-335)||(20982246-20982295)
chr5 (286-334)||(26516208-26516256)
chr5 (286-324)||(3951527-3951565)
chr5 (286-335)||(13244592-13244641)
chr5 (286-335)||(37063185-37063234)
chr5 (286-335)||(37611302-37611351)
chr5 (286-335)||(37788032-37788081)
chr5 (286-334)||(16945093-16945143)
chr5 (288-331)||(29365531-29365574)
chr5 (286-332)||(6738521-6738567)
chr5 (286-335)||(39105373-39105423)
chr5 (300-333)||(2569815-2569848)
chr5 (302-335)||(10798515-10798548)
chr5 (300-337)||(11153522-11153559)
chr5 (286-331)||(24084808-24084853)
chr5 (286-335)||(29588790-29588839)
chr5 (298-335)||(35095894-35095931)
chr5 (286-335)||(40534104-40534153)
chr5 (299-331)||(1961915-1961947)
chr5 (286-333)||(9202861-9202909)
chr5 (287-335)||(11434685-11434733)
chr5 (286-326)||(13264226-13264266)
chr5 (286-334)||(29115325-29115373)
chr5 (291-327)||(32059707-32059743)
[»] chr2 (14 HSPs)
chr2 (290-332)||(28803620-28803662)
chr2 (286-335)||(33197350-33197399)
chr2 (286-335)||(11393477-11393526)
chr2 (286-335)||(11410138-11410187)
chr2 (295-335)||(9478218-9478258)
chr2 (299-335)||(17952812-17952848)
chr2 (288-335)||(31461350-31461397)
chr2 (286-335)||(9886217-9886266)
chr2 (286-335)||(11393766-11393815)
chr2 (286-335)||(11410427-11410476)
chr2 (291-328)||(29318787-29318824)
chr2 (286-335)||(34339033-34339082)
chr2 (288-333)||(36852377-36852422)
chr2 (291-331)||(3102608-3102648)
[»] scaffold0072 (1 HSPs)
scaffold0072 (286-335)||(4882-4931)
[»] chr8 (18 HSPs)
chr8 (300-335)||(35534972-35535007)
chr8 (286-335)||(3645927-3645976)
chr8 (286-331)||(6918941-6918986)
chr8 (286-335)||(8536159-8536208)
chr8 (286-335)||(14482112-14482161)
chr8 (286-335)||(28769450-28769499)
chr8 (286-331)||(31875674-31875719)
chr8 (286-335)||(34563160-34563209)
chr8 (300-335)||(8629033-8629068)
chr8 (306-335)||(8060592-8060621)
chr8 (286-335)||(10727107-10727156)
chr8 (288-333)||(11813218-11813263)
chr8 (286-335)||(26716547-26716596)
chr8 (286-335)||(39392772-39392821)
chr8 (300-332)||(12972780-12972812)
chr8 (286-330)||(29592648-29592692)
chr8 (300-332)||(35298592-35298624)
chr8 (298-334)||(40280317-40280353)
[»] chr7 (13 HSPs)
chr7 (288-335)||(27389295-27389342)
chr7 (286-335)||(941454-941503)
chr7 (286-335)||(27481405-27481454)
chr7 (286-335)||(47003997-47004046)
chr7 (287-335)||(19624137-19624185)
chr7 (300-335)||(7244626-7244661)
chr7 (288-331)||(45078205-45078248)
chr7 (286-332)||(1431422-1431468)
chr7 (301-335)||(3241366-3241400)
chr7 (296-334)||(7274381-7274419)
chr7 (305-335)||(40632607-40632637)
chr7 (286-335)||(2223059-2223107)
chr7 (293-334)||(5005919-5005960)
[»] scaffold0590 (1 HSPs)
scaffold0590 (286-335)||(1185-1234)
[»] scaffold0508 (1 HSPs)
scaffold0508 (286-335)||(9886-9935)
[»] scaffold0275 (1 HSPs)
scaffold0275 (286-335)||(2741-2790)
[»] chr1 (10 HSPs)
chr1 (286-335)||(52013807-52013856)
chr1 (301-335)||(45107548-45107582)
chr1 (286-335)||(45975850-45975899)
chr1 (298-335)||(48282055-48282092)
chr1 (303-335)||(13037791-13037823)
chr1 (286-334)||(14128583-14128631)
chr1 (292-332)||(43112870-43112910)
chr1 (299-335)||(46499965-46500001)
chr1 (295-335)||(48748693-48748733)
chr1 (299-335)||(50240967-50241003)
[»] chr4 (10 HSPs)
chr4 (291-335)||(2980582-2980626)
chr4 (300-335)||(4191663-4191698)
chr4 (292-335)||(9843777-9843820)
chr4 (293-335)||(24160606-24160648)
chr4 (298-335)||(969456-969493)
chr4 (289-318)||(8469505-8469534)
chr4 (286-331)||(24193495-24193540)
chr4 (286-326)||(7342100-7342140)
chr4 (303-335)||(47970245-47970277)
chr4 (298-330)||(54414871-54414903)
[»] scaffold0044 (1 HSPs)
scaffold0044 (287-332)||(52054-52099)
[»] scaffold0654 (1 HSPs)
scaffold0654 (299-335)||(6748-6784)
[»] scaffold0014 (1 HSPs)
scaffold0014 (299-335)||(116667-116703)


Alignment Details
Target: chr3 (Bit Score: 191; Significance: 1e-103; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 41 - 337
Target Start/End: Complemental strand, 20502494 - 20502185
Alignment:
Q  41 ctgattatccctcataaatgcaagatggcccatcacattatacatggtgtgaattttatatccagatttcaagcaaatataaatatagttcattggtcat 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| | |||||||||||||||||    
T  20502494 ctgattatccctcataaatgcaagatggcccatcacattatacatggtgtgaattttatatccacatttcaagcatatattattatagttcattggtcat 20502395  T
Q  141 aattgcatacacatggaaagaaaagaac----------------tggtaaatgaactggcagaagttaattccaaacataaatccaagacaggttctgac 224  Q
    ||||||||||||||||| ||||||||||                ||||||||||||||||||||||||||||||| | |||||||||||||| |||||||    
T  20502394 aattgcatacacatggagagaaaagaacaataatatgaagctactggtaaatgaactggcagaagttaattccaacc-taaatccaagacagcttctgac 20502296  T
Q  225 aaaacaaagctatcaacaacaagtatggtcaaca-agctactttagtgtctgcttggatagatatagcataaatgcttatcatataagtgcttatatata 323  Q
    ||||||||||||||||||||   ||||||||||| ||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  20502295 aaaacaaagctatcaacaac---tatggtcaacagagctactttagtaactgcttggatagatatagcattaatgcttatcatataagtgcttatatata 20502199  T
Q  324 agctatttctattt 337  Q
    ||||||||||||||    
T  20502198 agctatttctattt 20502185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 41029011 - 41028962
Alignment:
Q  286 tatagcataaatgcttatcatataagtgcttatatataagctatttctat 335  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  41029011 tatagcttaaatgcttatcatataagtgcttatgtataagctatttctat 41028962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 16790248 - 16790199
Alignment:
Q  286 tatagcataaatgcttatcatataagtgcttatatataagctatttctat 335  Q
    ||||||||||  | |||||||||||||||||||||||||| |||||||||    
T  16790248 tatagcataagcgtttatcatataagtgcttatatataagttatttctat 16790199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 336
Target Start/End: Complemental strand, 26808433 - 26808397
Alignment:
Q  300 ttatcatataagtgcttatatataagctatttctatt 336  Q
    |||||||||||| ||||||||||||||||||||||||    
T  26808433 ttatcatataagagcttatatataagctatttctatt 26808397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 335
Target Start/End: Original strand, 38462194 - 38462240
Alignment:
Q  289 agcataaatgcttatcatataagtgcttatatataagctatttctat 335  Q
    ||||||||  ||||||||||||||| |||| ||||||||||||||||    
T  38462194 agcataaacacttatcatataagtgtttatttataagctatttctat 38462240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 331
Target Start/End: Complemental strand, 28843005 - 28842972
Alignment:
Q  298 gcttatcatataagtgcttatatataagctattt 331  Q
    ||||||||||||||||||||| ||||||||||||    
T  28843005 gcttatcatataagtgcttatgtataagctattt 28842972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 332
Target Start/End: Complemental strand, 33307727 - 33307694
Alignment:
Q  299 cttatcatataagtgcttatatataagctatttc 332  Q
    |||||||||||||||||||| |||||||||||||    
T  33307727 cttatcatataagtgcttatgtataagctatttc 33307694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 41724121 - 41724170
Alignment:
Q  286 tatagcataaatgcttatcatataagtgcttatatataagctatttctat 335  Q
    |||||||||| |||| || |||||||||||||| || |||||||||||||    
T  41724121 tatagcataagtgctcattatataagtgcttatgtacaagctatttctat 41724170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 43116588 - 43116539
Alignment:
Q  286 tatagcataaatgcttatcatataagtgcttatatataagctatttctat 335  Q
    ||||||||||||| |||||||| ||||| |||| | ||||||||||||||    
T  43116588 tatagcataaatgtttatcatacaagtgtttatgtgtaagctatttctat 43116539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 335
Target Start/End: Original strand, 48528500 - 48528537
Alignment:
Q  298 gcttatcatataagtgcttatatataagctatttctat 335  Q
    ||||||||||||||| ||||| ||||||||||||||||    
T  48528500 gcttatcatataagtacttatgtataagctatttctat 48528537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 332
Target Start/End: Original strand, 27792796 - 27792828
Alignment:
Q  300 ttatcatataagtgcttatatataagctatttc 332  Q
    ||||||||||||||||||| |||||||||||||    
T  27792796 ttatcatataagtgcttatgtataagctatttc 27792828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 329
Target Start/End: Complemental strand, 44374793 - 44374761
Alignment:
Q  297 tgcttatcatataagtgcttatatataagctat 329  Q
    |||||||||||||||||||||| ||||||||||    
T  44374793 tgcttatcatataagtgcttatgtataagctat 44374761  T

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Target: chr6 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 2514612 - 2514661
Alignment:
Q  286 tatagcataaatgcttatcatataagtgcttatatataagctatttctat 335  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  2514612 tatagcataaatgcttatcatgtaagtgcttatgtataagctatttctat 2514661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 287 - 335
Target Start/End: Complemental strand, 32578109 - 32578061
Alignment:
Q  287 atagcataaatgcttatcatataagtgcttatatataagctatttctat 335  Q
    |||||||||||| ||||||||||||||||||| | ||||||||||||||    
T  32578109 atagcataaatgattatcatataagtgcttatgtgtaagctatttctat 32578061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 293 - 335
Target Start/End: Original strand, 29249391 - 29249433
Alignment:
Q  293 taaatgcttatcatataagtgcttatatataagctatttctat 335  Q
    |||||||||||||||||||||||||| ||| ||||||||||||    
T  29249391 taaatgcttatcatataagtgcttatgtatcagctatttctat 29249433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 334
Target Start/End: Original strand, 264280 - 264329
Alignment:
Q  286 tatagcataaatgcttatcat-ataagtgcttatatataagctatttcta 334  Q
    ||||||| || |||||||||| ||||||||||||||||||||||||||||    
T  264280 tatagcacaagtgcttatcatgataagtgcttatatataagctatttcta 264329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 332
Target Start/End: Original strand, 4248870 - 4248914
Alignment:
Q  288 tagcataaatgcttatcatataagtgcttatatataagctatttc 332  Q
    ||||||||  |||| ||||||||||||||||||||||||||||||    
T  4248870 tagcataagcgcttgtcatataagtgcttatatataagctatttc 4248914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 300 - 335
Target Start/End: Complemental strand, 31668831 - 31668796
Alignment:
Q  300 ttatcatataagtgcttatatataagctatttctat 335  Q
    ||||||||||||||||||| ||||||||||||||||    
T  31668831 ttatcatataagtgcttatgtataagctatttctat 31668796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 335
Target Start/End: Original strand, 5899272 - 5899310
Alignment:
Q  297 tgcttatcatataagtgcttatatataagctatttctat 335  Q
    |||||||||| |||||| |||||||||||||||||||||    
T  5899272 tgcttatcatgtaagtgtttatatataagctatttctat 5899310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 332
Target Start/End: Complemental strand, 32386259 - 32386213
Alignment:
Q  286 tatagcataaatgcttatcatataagtgcttatatataagctatttc 332  Q
    ||||| ||||| | ||||||||||||||||||| |||||||||||||    
T  32386259 tatagtataaaagtttatcatataagtgcttatgtataagctatttc 32386213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 10452520 - 10452471
Alignment:
Q  286 tatagcataaatgcttatcatataagtgcttatatataagctatttctat 335  Q
    |||||||||| ||  |||||||| ||||||||| ||||||||||||||||    
T  10452520 tatagcataagtggctatcatatcagtgcttatgtataagctatttctat 10452471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 330
Target Start/End: Original strand, 1904730 - 1904774
Alignment:
Q  286 tatagcataaatgcttatcatataagtgcttatatataagctatt 330  Q
    ||||||||||||||||||| ||| |||| |||| |||||||||||    
T  1904730 tatagcataaatgcttatcgtatgagtgattatgtataagctatt 1904774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 330
Target Start/End: Original strand, 1908963 - 1909007
Alignment:
Q  286 tatagcataaatgcttatcatataagtgcttatatataagctatt 330  Q
    ||||||||||||||||||| ||| |||| |||| |||||||||||    
T  1908963 tatagcataaatgcttatcgtatgagtgattatgtataagctatt 1909007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 334
Target Start/End: Original strand, 7148589 - 7148625
Alignment:
Q  298 gcttatcatataagtgcttatatataagctatttcta 334  Q
    |||||| |||||||||||||| |||||||||||||||    
T  7148589 gcttattatataagtgcttatgtataagctatttcta 7148625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 333
Target Start/End: Complemental strand, 8470137 - 8470101
Alignment:
Q  297 tgcttatcatataagtgcttatatataagctatttct 333  Q
    |||||||| |||||||||||||| |||||||||||||    
T  8470137 tgcttatcgtataagtgcttataaataagctatttct 8470101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 334
Target Start/End: Original strand, 9027487 - 9027535
Alignment:
Q  286 tatagcataaatgcttatcatataagtgcttatatataagctatttcta 334  Q
    |||||||| ||  ||||| |||||||||||||| |||||||||||||||    
T  9027487 tatagcatgaacacttattatataagtgcttatctataagctatttcta 9027535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 335
Target Start/End: Original strand, 24774681 - 24774717
Alignment:
Q  299 cttatcatataagtgcttatatataagctatttctat 335  Q
    |||||||| ||||||||||||||||| ||||||||||    
T  24774681 cttatcatgtaagtgcttatatataaactatttctat 24774717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 20982295 - 20982246
Alignment:
Q  286 tatagcataaatgcttatcatataagtgcttatatataagctatttctat 335  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  20982295 tatagcataagtgcttatcatataagtgcttatgtataagctatttctat 20982246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 286 - 334
Target Start/End: Original strand, 26516208 - 26516256
Alignment:
Q  286 tatagcataaatgcttatcatataagtgcttatatataagctatttcta 334  Q
    ||||||||||  ||||||||||||||||||||| |||||||||||||||    
T  26516208 tatagcataagcgcttatcatataagtgcttatgtataagctatttcta 26516256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 324
Target Start/End: Original strand, 3951527 - 3951565
Alignment:
Q  286 tatagcataaatgcttatcatataagtgcttatatataa 324  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  3951527 tatagcataaatgcttatcatataagtgcttatgtataa 3951565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 13244641 - 13244592
Alignment:
Q  286 tatagcataaatgcttatcatataagtgcttatatataagctatttctat 335  Q
    ||||||||||| ||||||||||||||| ||||  ||||||||||||||||    
T  13244641 tatagcataaacgcttatcatataagttcttacttataagctatttctat 13244592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 37063234 - 37063185
Alignment:
Q  286 tatagcataaatgcttatcatataagtgcttatatataagctatttctat 335  Q
    |||||||||||||||| |||||||| ||||||| ||||| ||||||||||    
T  37063234 tatagcataaatgcttgtcatataaatgcttatgtataaactatttctat 37063185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 37611351 - 37611302
Alignment:
Q  286 tatagcataaatgcttatcatataagtgcttatatataagctatttctat 335  Q
    ||||||||||||| || |||||||||||||||| || |||||||||||||    
T  37611351 tatagcataaatggttgtcatataagtgcttatgtaaaagctatttctat 37611302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 37788081 - 37788032
Alignment:
Q  286 tatagcataaatgcttatcatataagtgcttatatataagctatttctat 335  Q
    ||||||||||||| || |||||||||||||||| || |||||||||||||    
T  37788081 tatagcataaatggttgtcatataagtgcttatgtaaaagctatttctat 37788032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 334
Target Start/End: Complemental strand, 16945143 - 16945093
Alignment:
Q  286 tatagcataaatgcttatcat--ataagtgcttatatataagctatttcta 334  Q
    ||||||||||| |||||||||  |||||||||||| |||||||||||||||    
T  16945143 tatagcataaaagcttatcatgtataagtgcttatgtataagctatttcta 16945093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 288 - 331
Target Start/End: Original strand, 29365531 - 29365574
Alignment:
Q  288 tagcataaatgcttatcatataagtgcttatatataagctattt 331  Q
    ||||||||| |||||||||||||||||| || ||||||||||||    
T  29365531 tagcataaaagcttatcatataagtgctcatgtataagctattt 29365574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 332
Target Start/End: Complemental strand, 6738567 - 6738521
Alignment:
Q  286 tatagcataaatgcttatcatataagtgcttatatataagctatttc 332  Q
    |||||||||||  |||||||||||||| ||||| |||||||||||||    
T  6738567 tatagcataaacacttatcatataagtacttatgtataagctatttc 6738521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 39105373 - 39105423
Alignment:
Q  286 tatagcataaatgcttatcat-ataagtgcttatatataagctatttctat 335  Q
    |||||||||| |||||||||| ||||| |||||| ||||||||||||||||    
T  39105373 tatagcataagtgcttatcatgataagcgcttatgtataagctatttctat 39105423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 333
Target Start/End: Complemental strand, 2569848 - 2569815
Alignment:
Q  300 ttatcatataagtgcttatatataagctatttct 333  Q
    ||||||||||||||||||| ||||||||||||||    
T  2569848 ttatcatataagtgcttatgtataagctatttct 2569815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 335
Target Start/End: Complemental strand, 10798548 - 10798515
Alignment:
Q  302 atcatataagtgcttatatataagctatttctat 335  Q
    ||||||||||||||||| ||||||||||||||||    
T  10798548 atcatataagtgcttatgtataagctatttctat 10798515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 337
Target Start/End: Complemental strand, 11153559 - 11153522
Alignment:
Q  300 ttatcatataagtgcttatatataagctatttctattt 337  Q
    ||||||||||||||||||| |||||||| |||||||||    
T  11153559 ttatcatataagtgcttatgtataagctctttctattt 11153522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 331
Target Start/End: Original strand, 24084808 - 24084853
Alignment:
Q  286 tatagcataaatgcttatcatataagtgcttatatataagctattt 331  Q
    |||| |||||| |||||||||||||||||| || ||||||||||||    
T  24084808 tatatcataaaagcttatcatataagtgctcatgtataagctattt 24084853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 29588790 - 29588839
Alignment:
Q  286 tatagcataaatgcttatcatataagtgcttatatataagctatttctat 335  Q
    |||||||||||  ||| | |||||||||||||| ||||||||||||||||    
T  29588790 tatagcataaacactttttatataagtgcttatgtataagctatttctat 29588839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 335
Target Start/End: Complemental strand, 35095931 - 35095894
Alignment:
Q  298 gcttatcatataagtgcttatatataagctatttctat 335  Q
    ||||||||||||||||||||||| ||| ||||||||||    
T  35095931 gcttatcatataagtgcttatatttaaactatttctat 35095894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 40534104 - 40534153
Alignment:
Q  286 tatagcataaatgcttatcatataagtgcttatatataagctatttctat 335  Q
    ||||||||||  ||||||||||||||  ||||| ||||||||||||||||    
T  40534104 tatagcataagcgcttatcatataaggacttatgtataagctatttctat 40534153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 331
Target Start/End: Original strand, 1961915 - 1961947
Alignment:
Q  299 cttatcatataagtgcttatatataagctattt 331  Q
    |||||||||||||||| ||||||||||||||||    
T  1961915 cttatcatataagtgcctatatataagctattt 1961947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 333
Target Start/End: Complemental strand, 9202909 - 9202861
Alignment:
Q  286 tatagcataaatgcttatcat-ataagtgcttatatataagctatttct 333  Q
    ||||||| || || ||||||| |||||||||||||||||||||||||||    
T  9202909 tatagcacaagtgtttatcatgataagtgcttatatataagctatttct 9202861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 335
Target Start/End: Complemental strand, 11434733 - 11434685
Alignment:
Q  287 atagcataaatgcttatcatataagtgcttatatataagctatttctat 335  Q
    |||||||| | ||||||||||||| || ||||| |||||||||||||||    
T  11434733 atagcatacacgcttatcatataattgtttataaataagctatttctat 11434685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 326
Target Start/End: Complemental strand, 13264266 - 13264226
Alignment:
Q  286 tatagcataaatgcttatcatataagtgcttatatataagc 326  Q
    ||||||||||||| ||||||||||||||||| | |||||||    
T  13264266 tatagcataaatgattatcatataagtgcttgtgtataagc 13264226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 334
Target Start/End: Complemental strand, 29115373 - 29115325
Alignment:
Q  286 tatagcataaatgcttatcatataagtgcttatatataagctatttcta 334  Q
    |||||||||||   |||||||| |||||||||| |||||||||||||||    
T  29115373 tatagcataaacatttatcataaaagtgcttatgtataagctatttcta 29115325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 327
Target Start/End: Complemental strand, 32059743 - 32059707
Alignment:
Q  291 cataaatgcttatcatataagtgcttatatataagct 327  Q
    ||||||| |||||||||||||||||||| ||||||||    
T  32059743 cataaatacttatcatataagtgcttatgtataagct 32059707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 290 - 332
Target Start/End: Complemental strand, 28803662 - 28803620
Alignment:
Q  290 gcataaatgcttatcatataagtgcttatatataagctatttc 332  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  28803662 gcataaatgcttatcatataagtgcttatatataagttatttc 28803620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 33197399 - 33197350
Alignment:
Q  286 tatagcataaatgcttatcatataagtgcttatatataagctatttctat 335  Q
    |||| |||||| ||||||||||||||||||||| ||||||||||||||||    
T  33197399 tataacataaacgcttatcatataagtgcttatctataagctatttctat 33197350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 11393526 - 11393477
Alignment:
Q  286 tatagcataaatgcttatcatataagtgcttatatataagctatttctat 335  Q
    ||||||| || || ||||||||||||||||||| ||||||||||||||||    
T  11393526 tatagcacaagtgtttatcatataagtgcttatctataagctatttctat 11393477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 11410187 - 11410138
Alignment:
Q  286 tatagcataaatgcttatcatataagtgcttatatataagctatttctat 335  Q
    ||||||| || || ||||||||||||||||||| ||||||||||||||||    
T  11410187 tatagcacaagtgtttatcatataagtgcttatctataagctatttctat 11410138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 335
Target Start/End: Original strand, 9478218 - 9478258
Alignment:
Q  295 aatgcttatcatataagtgcttatatataagctatttctat 335  Q
    ||||||||||||||||||| |||| ||||||||||||||||    
T  9478218 aatgcttatcatataagtgtttatgtataagctatttctat 9478258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 335
Target Start/End: Complemental strand, 17952848 - 17952812
Alignment:
Q  299 cttatcatataagtgcttatatataagctatttctat 335  Q
    ||||||||||||| |||||||||||||||||||||||    
T  17952848 cttatcatataagagcttatatataagctatttctat 17952812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 288 - 335
Target Start/End: Original strand, 31461350 - 31461397
Alignment:
Q  288 tagcataaatgcttatcatataagtgcttatatataagctatttctat 335  Q
    ||||||||| |  ||||||||||||| |||||||||||||||||||||    
T  31461350 tagcataaacgtatatcatataagtggttatatataagctatttctat 31461397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 9886217 - 9886266
Alignment:
Q  286 tatagcataaatgcttatcatataagtgcttatatataagctatttctat 335  Q
    |||||| ||| ||||||||||||  |||||||| ||||||||||||||||    
T  9886217 tatagcctaattgcttatcatatgtgtgcttatgtataagctatttctat 9886266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 11393815 - 11393766
Alignment:
Q  286 tatagcataaatgcttatcatataagtgcttatatataagctatttctat 335  Q
    |||||||||||   ||||||| ||||||||||| ||||||||||||||||    
T  11393815 tatagcataaacatttatcatttaagtgcttatgtataagctatttctat 11393766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 11410476 - 11410427
Alignment:
Q  286 tatagcataaatgcttatcatataagtgcttatatataagctatttctat 335  Q
    |||||||||||   ||||||| ||||||||||| ||||||||||||||||    
T  11410476 tatagcataaacatttatcatttaagtgcttatgtataagctatttctat 11410427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 328
Target Start/End: Original strand, 29318787 - 29318824
Alignment:
Q  291 cataaatgcttatcatataagtgcttatatataagcta 328  Q
    ||||| ||||||||||||||||||||||| ||||||||    
T  29318787 cataagtgcttatcatataagtgcttatacataagcta 29318824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 34339033 - 34339082
Alignment:
Q  286 tatagcataaatgcttatcatataagtgcttatatataagctatttctat 335  Q
    |||||||||||  |||||||||||||||||||| ||||| || |||||||    
T  34339033 tatagcataaacacttatcatataagtgcttatgtataaactttttctat 34339082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 333
Target Start/End: Original strand, 36852377 - 36852422
Alignment:
Q  288 tagcataaatgcttatcatataagtgcttatatataagctatttct 333  Q
    ||||||||| ||||| || |||||||||||| ||||||||||||||    
T  36852377 tagcataaacgcttaccagataagtgcttatgtataagctatttct 36852422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 331
Target Start/End: Original strand, 3102608 - 3102648
Alignment:
Q  291 cataaatgcttatcatataagtgcttatatataagctattt 331  Q
    |||||||| ||||||||||| ||||||| ||||||||||||    
T  3102608 cataaatgtttatcatataactgcttatgtataagctattt 3102648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 4882 - 4931
Alignment:
Q  286 tatagcataaatgcttatcatataagtgcttatatataagctatttctat 335  Q
    |||||||||||||  |||||||||||||| ||||||||||||||||||||    
T  4882 tatagcataaatgtctatcatataagtgcctatatataagctatttctat 4931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000003; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 300 - 335
Target Start/End: Complemental strand, 35535007 - 35534972
Alignment:
Q  300 ttatcatataagtgcttatatataagctatttctat 335  Q
    ||||||||||||||||||||||||||||||||||||    
T  35535007 ttatcatataagtgcttatatataagctatttctat 35534972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 3645976 - 3645927
Alignment:
Q  286 tatagcataaatgcttatcatataagtgcttatatataagctatttctat 335  Q
    |||||||||| || ||||||||||||||||| | ||||||||||||||||    
T  3645976 tatagcataagtgtttatcatataagtgcttgtgtataagctatttctat 3645927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 331
Target Start/End: Original strand, 6918941 - 6918986
Alignment:
Q  286 tatagcataaatgcttatcatataagtgcttatatataagctattt 331  Q
    |||||||||| || ||||||||||||||||||| ||||||||||||    
T  6918941 tatagcataagtgtttatcatataagtgcttatgtataagctattt 6918986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 8536208 - 8536159
Alignment:
Q  286 tatagcataaatgcttatcatataagtgcttatatataagctatttctat 335  Q
    |||| ||| ||||||| |||||||||||||||| ||||||||||||||||    
T  8536208 tataccatgaatgcttgtcatataagtgcttatgtataagctatttctat 8536159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 14482112 - 14482161
Alignment:
Q  286 tatagcataaatgcttatcatataagtgcttatatataagctatttctat 335  Q
    |||||||| | |||||||||||||||||||||| ||||| ||||||||||    
T  14482112 tatagcattagtgcttatcatataagtgcttatgtataaactatttctat 14482161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 28769499 - 28769450
Alignment:
Q  286 tatagcataaatgcttatcatataagtgcttatatataagctatttctat 335  Q
    |||||||||| |||||||||||||| ||||||| ||||||||||| ||||    
T  28769499 tatagcataagtgcttatcatataaatgcttatgtataagctattcctat 28769450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 331
Target Start/End: Complemental strand, 31875719 - 31875674
Alignment:
Q  286 tatagcataaatgcttatcatataagtgcttatatataagctattt 331  Q
    ||||||||||  ||||||||||||||||||||| ||||||||||||    
T  31875719 tatagcataagcgcttatcatataagtgcttatctataagctattt 31875674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 34563160 - 34563209
Alignment:
Q  286 tatagcataaatgcttatcatataagtgcttatatataagctatttctat 335  Q
    |||||||||||   |||||||||||||||||||||||||| |||||||||    
T  34563160 tatagcataaacatttatcatataagtgcttatatataagttatttctat 34563209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 300 - 335
Target Start/End: Original strand, 8629033 - 8629068
Alignment:
Q  300 ttatcatataagtgcttatatataagctatttctat 335  Q
    ||||||||||||||||||| ||||||||||||||||    
T  8629033 ttatcatataagtgcttatttataagctatttctat 8629068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 335
Target Start/End: Original strand, 8060592 - 8060621
Alignment:
Q  306 tataagtgcttatatataagctatttctat 335  Q
    ||||||||||||||||||||||||||||||    
T  8060592 tataagtgcttatatataagctatttctat 8060621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 10727107 - 10727156
Alignment:
Q  286 tatagcataaatgcttatcatataagtgcttatatataagctatttctat 335  Q
    |||||||||| || | |||||||||||||||||  |||||||||||||||    
T  10727107 tatagcataagtgttcatcatataagtgcttatgcataagctatttctat 10727156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 333
Target Start/End: Complemental strand, 11813263 - 11813218
Alignment:
Q  288 tagcataaatgcttatcatataagtgcttatatataagctatttct 333  Q
    ||||||||| ||||||||||||||||||||| || ||| |||||||    
T  11813263 tagcataaacgcttatcatataagtgcttatgtacaagatatttct 11813218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 26716596 - 26716547
Alignment:
Q  286 tatagcataaatgcttatcatataagtgcttatatataagctatttctat 335  Q
    |||||||||||  ||||| |||||||||||||| ||||||||| ||||||    
T  26716596 tatagcataaacacttattatataagtgcttatgtataagctacttctat 26716547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 39392821 - 39392772
Alignment:
Q  286 tatagcataaatgcttatcatataagtgcttatatataagctatttctat 335  Q
    |||||||||| |||||||||||||||||  ||| ||||| ||||||||||    
T  39392821 tatagcataagtgcttatcatataagtggctatgtataaactatttctat 39392772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 332
Target Start/End: Original strand, 12972780 - 12972812
Alignment:
Q  300 ttatcatataagtgcttatatataagctatttc 332  Q
    ||||||||||||||||||| |||||||||||||    
T  12972780 ttatcatataagtgcttatgtataagctatttc 12972812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 330
Target Start/End: Complemental strand, 29592692 - 29592648
Alignment:
Q  286 tatagcataaatgcttatcatataagtgcttatatataagctatt 330  Q
    |||||||||| | |||||||||||||||||| | |||||||||||    
T  29592692 tatagcataagttcttatcatataagtgcttttgtataagctatt 29592648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 332
Target Start/End: Complemental strand, 35298624 - 35298592
Alignment:
Q  300 ttatcatataagtgcttatatataagctatttc 332  Q
    ||||||||||||||||||| |||||||||||||    
T  35298624 ttatcatataagtgcttatgtataagctatttc 35298592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 334
Target Start/End: Complemental strand, 40280353 - 40280317
Alignment:
Q  298 gcttatcatataagtgcttatatataagctatttcta 334  Q
    ||||||||||||||||| |||||||||| ||||||||    
T  40280353 gcttatcatataagtgcctatatataagttatttcta 40280317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000003; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 288 - 335
Target Start/End: Original strand, 27389295 - 27389342
Alignment:
Q  288 tagcataaatgcttatcatataagtgcttatatataagctatttctat 335  Q
    |||||||| ||||||||||||||||| |||| ||||||||||||||||    
T  27389295 tagcataagtgcttatcatataagtgtttatgtataagctatttctat 27389342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 941454 - 941503
Alignment:
Q  286 tatagcataaatgcttatcatataagtgcttatatataagctatttctat 335  Q
    |||||||||||  ||||| |||||||||| ||||||||||||||||||||    
T  941454 tatagcataaaaacttataatataagtgcatatatataagctatttctat 941503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 27481454 - 27481405
Alignment:
Q  286 tatagcataaatgcttatcatataagtgcttatatataagctatttctat 335  Q
    ||||||||||||| |||| ||||||||| |||| ||||||||||||||||    
T  27481454 tatagcataaatgtttattatataagtgtttatgtataagctatttctat 27481405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 47003997 - 47004046
Alignment:
Q  286 tatagcataaatgcttatcatataagtgcttatatataagctatttctat 335  Q
    ||||||| ||||| |||||||||||||| |||||| ||||||||||||||    
T  47003997 tatagcaaaaatgtttatcatataagtgtttatatgtaagctatttctat 47004046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 335
Target Start/End: Original strand, 19624137 - 19624185
Alignment:
Q  287 atagcataaatgcttatcatataagtgcttatatataagctatttctat 335  Q
    ||||||||||  ||||||||||||| ||||||||||||| |||||||||    
T  19624137 atagcataaacacttatcatataagggcttatatataagatatttctat 19624185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 300 - 335
Target Start/End: Original strand, 7244626 - 7244661
Alignment:
Q  300 ttatcatataagtgcttatatataagctatttctat 335  Q
    ||||||||||||||||||| ||||||||||||||||    
T  7244626 ttatcatataagtgcttatgtataagctatttctat 7244661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 288 - 331
Target Start/End: Original strand, 45078205 - 45078248
Alignment:
Q  288 tagcataaatgcttatcatataagtgcttatatataagctattt 331  Q
    ||||||||| | ||||||||||||||||||| ||||||||||||    
T  45078205 tagcataaacgtttatcatataagtgcttatgtataagctattt 45078248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 332
Target Start/End: Complemental strand, 1431468 - 1431422
Alignment:
Q  286 tatagcataaatgcttatcatataagtgcttatatataagctatttc 332  Q
    |||||||||| ||||||||||||||||| |||| |||||| ||||||    
T  1431468 tatagcataagtgcttatcatataagtgtttatgtataagttatttc 1431422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 335
Target Start/End: Original strand, 3241366 - 3241400
Alignment:
Q  301 tatcatataagtgcttatatataagctatttctat 335  Q
    ||||||||||||||||||||| |||||||||||||    
T  3241366 tatcatataagtgcttatatagaagctatttctat 3241400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 334
Target Start/End: Original strand, 7274381 - 7274419
Alignment:
Q  296 atgcttatcatataagtgcttatatataagctatttcta 334  Q
    |||||||||||| |||||||||||||||| |||||||||    
T  7274381 atgcttatcataaaagtgcttatatataaactatttcta 7274419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 335
Target Start/End: Complemental strand, 40632637 - 40632607
Alignment:
Q  305 atataagtgcttatatataagctatttctat 335  Q
    |||||||||||||||||||||||||||||||    
T  40632637 atataagtgcttatatataagctatttctat 40632607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 2223059 - 2223107
Alignment:
Q  286 tatagcataaatgcttatcatataagtgcttatatataagctatttctat 335  Q
    |||||||||||| |||||| |||||||| |||| ||||||||||||||||    
T  2223059 tatagcataaat-cttatcgtataagtgtttatgtataagctatttctat 2223107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 334
Target Start/End: Complemental strand, 5005960 - 5005919
Alignment:
Q  293 taaatgcttatcatataagtgcttatatataagctatttcta 334  Q
    |||| ||||||||| |||||||||| ||||||||||||||||    
T  5005960 taaacgcttatcatctaagtgcttacatataagctatttcta 5005919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 1234 - 1185
Alignment:
Q  286 tatagcataaatgcttatcatataagtgcttatatataagctatttctat 335  Q
    ||||||||||| |  |||||||||||||||||| ||||||||||||||||    
T  1234 tatagcataaacgtctatcatataagtgcttatgtataagctatttctat 1185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 9935 - 9886
Alignment:
Q  286 tatagcataaatgcttatcatataagtgcttatatataagctatttctat 335  Q
    ||||| |||||||||||||||||| |||||||| |||||| |||||||||    
T  9935 tatagaataaatgcttatcatataggtgcttatgtataagttatttctat 9886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 2741 - 2790
Alignment:
Q  286 tatagcataaatgcttatcatataagtgcttatatataagctatttctat 335  Q
    ||||||||||| |  |||||||||||||||||| ||||||||||||||||    
T  2741 tatagcataaacgtctatcatataagtgcttatgtataagctatttctat 2790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 34; Significance: 0.0000000005; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 52013807 - 52013856
Alignment:
Q  286 tatagcataaatgcttatcatataagtgcttatatataagctatttctat 335  Q
    |||||||||||| |||||||| ||| ||||||| ||||||||||||||||    
T  52013807 tatagcataaatacttatcatgtaaatgcttatgtataagctatttctat 52013856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 335
Target Start/End: Original strand, 45107548 - 45107582
Alignment:
Q  301 tatcatataagtgcttatatataagctatttctat 335  Q
    |||||||||||||||||| ||||||||||||||||    
T  45107548 tatcatataagtgcttatctataagctatttctat 45107582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 45975850 - 45975899
Alignment:
Q  286 tatagcataaatgcttatcatataagtgcttatatataagctatttctat 335  Q
    ||||||| |||  ||||||||||||||||||| | |||||||||||||||    
T  45975850 tatagcaaaaacacttatcatataagtgcttacacataagctatttctat 45975899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 335
Target Start/End: Original strand, 48282055 - 48282092
Alignment:
Q  298 gcttatcatataagtgcttatatataagctatttctat 335  Q
    ||||||||||||||||||||| || |||||||||||||    
T  48282055 gcttatcatataagtgcttatgtaaaagctatttctat 48282092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 335
Target Start/End: Original strand, 13037791 - 13037823
Alignment:
Q  303 tcatataagtgcttatatataagctatttctat 335  Q
    |||||||||||||||| ||||||||||||||||    
T  13037791 tcatataagtgcttatgtataagctatttctat 13037823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 334
Target Start/End: Complemental strand, 14128631 - 14128583
Alignment:
Q  286 tatagcataaatgcttatcatataagtgcttatatataagctatttcta 334  Q
    ||||| |||||  |||||||||||||||||||||| |||| ||||||||    
T  14128631 tatagtataaagacttatcatataagtgcttatatgtaagttatttcta 14128583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 332
Target Start/End: Original strand, 43112870 - 43112910
Alignment:
Q  292 ataaatgcttatcatataagtgcttatatataagctatttc 332  Q
    ||||||||||||||||||| |||| || |||||||||||||    
T  43112870 ataaatgcttatcatataaatgctcatgtataagctatttc 43112910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 335
Target Start/End: Complemental strand, 46500001 - 46499965
Alignment:
Q  299 cttatcatataagtgcttatatataagctatttctat 335  Q
    |||| ||||||||||||||| ||||||||||||||||    
T  46500001 cttaacatataagtgcttatctataagctatttctat 46499965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 335
Target Start/End: Complemental strand, 48748733 - 48748693
Alignment:
Q  295 aatgcttatcatataagtgcttatatataagctatttctat 335  Q
    |||| |||||||||| |||||||| ||||||||||||||||    
T  48748733 aatgtttatcatatatgtgcttatgtataagctatttctat 48748693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 335
Target Start/End: Original strand, 50240967 - 50241003
Alignment:
Q  299 cttatcatataagtgcttatatataagctatttctat 335  Q
    ||||| ||||||||||||||||||||||| |||||||    
T  50240967 cttatgatataagtgcttatatataagctttttctat 50241003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 33; Significance: 0.000000002; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 335
Target Start/End: Complemental strand, 2980626 - 2980582
Alignment:
Q  291 cataaatgcttatcatataagtgcttatatataagctatttctat 335  Q
    ||||| || ||||||||||||||||||| ||||||||||||||||    
T  2980626 cataagtgtttatcatataagtgcttatgtataagctatttctat 2980582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 300 - 335
Target Start/End: Original strand, 4191663 - 4191698
Alignment:
Q  300 ttatcatataagtgcttatatataagctatttctat 335  Q
    ||||||||||||||||||| ||||||||||||||||    
T  4191663 ttatcatataagtgcttatgtataagctatttctat 4191698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 292 - 335
Target Start/End: Complemental strand, 9843820 - 9843777
Alignment:
Q  292 ataaatgcttatcatataagtgcttatatataagctatttctat 335  Q
    |||| |||||||||||||| ||||||| ||||||||||||||||    
T  9843820 ataagtgcttatcatataactgcttatgtataagctatttctat 9843777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 293 - 335
Target Start/End: Complemental strand, 24160648 - 24160606
Alignment:
Q  293 taaatgcttatcatataagtgcttatatataagctatttctat 335  Q
    |||| |||||||||||||||||||||| ||||||| |||||||    
T  24160648 taaacgcttatcatataagtgcttataaataagctttttctat 24160606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 335
Target Start/End: Complemental strand, 969493 - 969456
Alignment:
Q  298 gcttatcatataagtgcttatatataagctatttctat 335  Q
    ||||||||||||||||||||| ||||||| ||||||||    
T  969493 gcttatcatataagtgcttatctataagcaatttctat 969456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 318
Target Start/End: Complemental strand, 8469534 - 8469505
Alignment:
Q  289 agcataaatgcttatcatataagtgcttat 318  Q
    ||||||||||||||||||||||||||||||    
T  8469534 agcataaatgcttatcatataagtgcttat 8469505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 331
Target Start/End: Original strand, 24193495 - 24193540
Alignment:
Q  286 tatagcataaatgcttatcatataagtgcttatatataagctattt 331  Q
    ||||||||||| ||||||||||||||| ||||| |||||| |||||    
T  24193495 tatagcataaacgcttatcatataagtacttatgtataagttattt 24193540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 326
Target Start/End: Original strand, 7342100 - 7342140
Alignment:
Q  286 tatagcataaatgcttatcatataagtgcttatatataagc 326  Q
    ||||| |||||||||||||| |||||||||||| |||||||    
T  7342100 tatagtataaatgcttatcagataagtgcttatgtataagc 7342140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 335
Target Start/End: Original strand, 47970245 - 47970277
Alignment:
Q  303 tcatataagtgcttatatataagctatttctat 335  Q
    |||||||||||||||| ||||||||||||||||    
T  47970245 tcatataagtgcttatgtataagctatttctat 47970277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 330
Target Start/End: Original strand, 54414871 - 54414903
Alignment:
Q  298 gcttatcatataagtgcttatatataagctatt 330  Q
    ||||||||||||||||||||| |||||||||||    
T  54414871 gcttatcatataagtgcttatgtataagctatt 54414903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 332
Target Start/End: Complemental strand, 52099 - 52054
Alignment:
Q  287 atagcataaatgcttatcatataagtgcttatatataagctatttc 332  Q
    ||||||||||  |||| ||||||||||||||| |||||||||||||    
T  52099 atagcataaagacttaacatataagtgcttatgtataagctatttc 52054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0654 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0654
Description:

Target: scaffold0654; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 335
Target Start/End: Complemental strand, 6784 - 6748
Alignment:
Q  299 cttatcatataagtgcttatatataagctatttctat 335  Q
    |||||||||||||||||||| ||||| ||||||||||    
T  6784 cttatcatataagtgcttatgtataaactatttctat 6748  T

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Target: scaffold0014 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 335
Target Start/End: Complemental strand, 116703 - 116667
Alignment:
Q  299 cttatcatataagtgcttatatataagctatttctat 335  Q
    |||||||||||||||||||| ||||| ||||||||||    
T  116703 cttatcatataagtgcttatgtataaactatttctat 116667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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