View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2226R-Insertion-16 (Length: 55)
Name: NF2226R-Insertion-16
Description: NF2226R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2226R-Insertion-16 |
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| [»] chr3 (2 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 47; Significance: 1e-18; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 47; E-Value: 1e-18
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 8167891 - 8167845
Alignment:
| Q |
9 |
aaatcgacataaattattccaaatcgtactgtgtaccctgcatccca |
55 |
Q |
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| T |
8167891 |
aaatcgacataaattattccaaatcgtactgtgtaccctgcatccca |
8167845 |
T |
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Target: chr3; HSP #2
Raw Score: 43; E-Value: 2e-16
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 8143069 - 8143023
Alignment:
| Q |
9 |
aaatcgacataaattattccaaatcgtactgtgtaccctgcatccca |
55 |
Q |
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||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
8143069 |
aaatccacataaattattccaaatcgtactgtgtaccctgcatccca |
8143023 |
T |
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