View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2226R-Insertion-2 (Length: 912)

Name: NF2226R-Insertion-2
Description: NF2226R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2226R-Insertion-2
NF2226R-Insertion-2
[»] chr2 (29 HSPs)
chr2 (9-804)||(32706305-32707096)
chr2 (9-79)||(32718581-32718651)
chr2 (9-79)||(32724986-32725056)
chr2 (180-233)||(12734929-12734982)
chr2 (201-233)||(14530530-14530562)
chr2 (189-233)||(28960211-28960255)
chr2 (430-482)||(32749254-32749306)
chr2 (203-233)||(8197541-8197571)
chr2 (203-233)||(8202301-8202331)
chr2 (180-234)||(12474926-12474980)
chr2 (180-233)||(227418-227471)
chr2 (180-233)||(1404161-1404214)
chr2 (201-234)||(2073306-2073339)
chr2 (180-233)||(3635323-3635376)
chr2 (180-233)||(4807824-4807877)
chr2 (180-233)||(9531600-9531653)
chr2 (180-233)||(9556369-9556422)
chr2 (180-233)||(12520062-12520115)
chr2 (193-234)||(13474213-13474254)
chr2 (180-233)||(17670697-17670750)
chr2 (180-233)||(25834907-25834960)
chr2 (180-233)||(28508907-28508960)
chr2 (180-233)||(30306261-30306314)
chr2 (201-230)||(35715856-35715885)
chr2 (180-233)||(38328370-38328423)
chr2 (180-233)||(38435181-38435234)
chr2 (201-234)||(38452685-38452718)
chr2 (180-233)||(41763043-41763096)
chr2 (180-233)||(43573130-43573183)
[»] chr5 (17 HSPs)
chr5 (525-894)||(3001615-3001985)
chr5 (144-391)||(3000932-3001177)
chr5 (18-84)||(2999682-2999748)
chr5 (432-506)||(3001217-3001291)
chr5 (37-84)||(7432420-7432467)
chr5 (100-146)||(3000803-3000849)
chr5 (180-233)||(12492384-12492437)
chr5 (180-234)||(3302073-3302127)
chr5 (180-233)||(408494-408547)
chr5 (180-233)||(4496613-4496666)
chr5 (201-234)||(10124387-10124420)
chr5 (201-234)||(10989084-10989117)
chr5 (180-233)||(14665941-14665994)
chr5 (201-234)||(16913881-16913914)
chr5 (180-233)||(28976859-28976912)
chr5 (180-233)||(29816611-29816664)
chr5 (201-234)||(32489296-32489329)
[»] chr6 (10 HSPs)
chr6 (9-84)||(14903439-14903514)
chr6 (180-233)||(579647-579700)
chr6 (180-234)||(5096063-5096117)
chr6 (180-234)||(9706999-9707053)
chr6 (180-234)||(34934829-34934883)
chr6 (180-233)||(12890804-12890857)
chr6 (180-233)||(28085605-28085658)
chr6 (180-233)||(31819060-31819113)
chr6 (180-233)||(34143765-34143818)
chr6 (180-233)||(34156381-34156434)
[»] chr3 (19 HSPs)
chr3 (189-234)||(48712074-48712119)
chr3 (180-233)||(25191606-25191659)
chr3 (178-233)||(52139027-52139082)
chr3 (180-234)||(31566160-31566214)
chr3 (180-234)||(40106619-40106673)
chr3 (180-233)||(22301-22354)
chr3 (180-233)||(311309-311362)
chr3 (180-233)||(2133612-2133665)
chr3 (180-233)||(5169061-5169114)
chr3 (180-233)||(12096705-12096758)
chr3 (201-234)||(15296157-15296190)
chr3 (201-234)||(27192473-27192506)
chr3 (180-233)||(31146928-31146981)
chr3 (201-234)||(43396081-43396114)
chr3 (201-234)||(45289090-45289123)
chr3 (201-234)||(45933375-45933408)
chr3 (180-233)||(48508464-48508517)
chr3 (180-233)||(53262370-53262423)
chr3 (180-233)||(54128608-54128661)
[»] scaffold0041 (1 HSPs)
scaffold0041 (180-234)||(16807-16861)
[»] chr4 (17 HSPs)
chr4 (180-233)||(6957827-6957880)
chr4 (180-233)||(43434153-43434206)
chr4 (189-233)||(32339797-32339841)
chr4 (180-233)||(436458-436511)
chr4 (203-232)||(4548274-4548303)
chr4 (180-233)||(21528517-21528570)
chr4 (201-234)||(23906296-23906329)
chr4 (180-233)||(30634106-30634159)
chr4 (180-233)||(31959814-31959867)
chr4 (201-234)||(38789622-38789655)
chr4 (201-234)||(48622542-48622575)
chr4 (201-234)||(49416957-49416990)
chr4 (180-233)||(50238615-50238668)
chr4 (180-233)||(50238701-50238754)
chr4 (201-234)||(50471777-50471810)
chr4 (180-233)||(52569515-52569568)
chr4 (180-233)||(55007975-55008028)
[»] chr1 (25 HSPs)
chr1 (180-233)||(3777260-3777313)
chr1 (180-233)||(6025834-6025887)
chr1 (201-233)||(22930643-22930675)
chr1 (201-233)||(31274401-31274433)
chr1 (201-233)||(43898459-43898491)
chr1 (200-234)||(36339803-36339837)
chr1 (180-230)||(39140744-39140794)
chr1 (180-234)||(49347392-49347446)
chr1 (180-234)||(52921309-52921363)
chr1 (180-233)||(696499-696552)
chr1 (180-233)||(1210974-1211027)
chr1 (180-233)||(25979231-25979284)
chr1 (180-233)||(29577481-29577534)
chr1 (201-234)||(29975449-29975482)
chr1 (180-233)||(30202130-30202183)
chr1 (180-233)||(32079177-32079230)
chr1 (180-233)||(34444585-34444638)
chr1 (201-234)||(40568409-40568442)
chr1 (180-233)||(41560458-41560511)
chr1 (201-234)||(42337806-42337839)
chr1 (201-234)||(43028807-43028840)
chr1 (180-233)||(43481798-43481851)
chr1 (180-233)||(44941776-44941829)
chr1 (180-233)||(50636310-50636363)
chr1 (180-233)||(50846791-50846844)
[»] chr8 (15 HSPs)
chr8 (201-233)||(35643608-35643640)
chr8 (38-82)||(39851723-39851767)
chr8 (180-234)||(44529454-44529508)
chr8 (180-234)||(45419464-45419518)
chr8 (201-230)||(1313814-1313843)
chr8 (180-233)||(1928587-1928640)
chr8 (180-241)||(4955420-4955481)
chr8 (180-233)||(10668497-10668550)
chr8 (180-233)||(11523723-11523776)
chr8 (189-234)||(12611735-12611780)
chr8 (180-233)||(14742082-14742135)
chr8 (180-233)||(25473403-25473456)
chr8 (205-234)||(29520903-29520932)
chr8 (180-233)||(32276914-32276967)
chr8 (180-233)||(36545378-36545431)
[»] chr7 (22 HSPs)
chr7 (189-233)||(12966254-12966298)
chr7 (180-234)||(33732061-33732115)
chr7 (180-230)||(40149016-40149066)
chr7 (180-234)||(40979927-40979981)
chr7 (180-234)||(48919341-48919395)
chr7 (180-233)||(1011275-1011328)
chr7 (180-233)||(2885722-2885775)
chr7 (180-233)||(5418303-5418356)
chr7 (180-233)||(11594189-11594242)
chr7 (180-233)||(12841275-12841328)
chr7 (180-233)||(22349849-22349902)
chr7 (180-233)||(27649009-27649062)
chr7 (180-233)||(28208328-28208381)
chr7 (180-233)||(29650613-29650666)
chr7 (180-233)||(31005434-31005487)
chr7 (180-233)||(31682602-31682655)
chr7 (180-233)||(31869102-31869155)
chr7 (180-233)||(32631793-32631846)
chr7 (180-233)||(33073158-33073211)
chr7 (180-233)||(36101777-36101830)
chr7 (180-233)||(37618174-37618227)
chr7 (180-233)||(39906372-39906425)
[»] scaffold0168 (1 HSPs)
scaffold0168 (180-233)||(28889-28942)
[»] scaffold0018 (1 HSPs)
scaffold0018 (180-233)||(31697-31750)


Alignment Details
Target: chr2 (Bit Score: 751; Significance: 0; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 751; E-Value: 0
Query Start/End: Original strand, 9 - 804
Target Start/End: Original strand, 32706305 - 32707096
Alignment:
Q  9 agatcattatttatttaactcagagagctagcttgatgcaatttctagcttcattacatatttaaatcattgaatagaagaagagaagcgtgtttccaac 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32706305 agatcattatttatttaactcagagagctagcttgatgcaatttctagcttcattacatatttaaatcattgaatagaagaagagaagcgtgtttccaac 32706404  T
Q  109 actagttatacaagaagagaagcgtgttcgctttgtgggtggtgagttgcgtgttgtagtgtttattttttatttgatggatgtagtcgattccacttag 208  Q
    ||||||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32706405 actagttatacaagaagagaagcgtgttcgctttgtgg----tgagttgcgtgttgtagtgtttattttttatttgatggatgtagtcgattccacttag 32706500  T
Q  209 tgggataatgcttggttgttgttgtacttaaaatattattttagttgtgttggcctgttttgattggcaagatttttccttttgtttattaatatgcttt 308  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  32706501 tgggataatgcttggttgttgttgtacttaaaatattattttagttgtgttggcctgttttgatatgcaagatttttccttttgtttattaatatgcttt 32706600  T
Q  309 cattttagctgaatatctgctatggctgctaggatataggcttataggatgaattatgtgcagtcatgattagtcaattttctatagctcagtggatatt 408  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32706601 cattttagctgaatatctgctatggctgctaggatataggcttataggatgaattatgtgcagtcatgattagtcaattttctatagctcagtggatatt 32706700  T
Q  409 agctccttcctctttattatatttggatttctttgtttgtagagattgaaaattgttactgcgctgttttcactattactttttcctatatcagaatgcg 508  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32706701 agctccttcctctttattatatttggatttctttgtttgtagagattgaaaattgttactgcgctgttttcactattactttttcctatatcagaatgcg 32706800  T
Q  509 tcgatttcaggtaacgacgattacaaattctactttccaagacacaggtatagcagctataggcgtggagcatcaatttcacttccaaatatcccagata 608  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  32706801 tcgatttcagctaacgacgattacaaattctactttccaagacacaggcatagcagctataggcgtggtgcatcaatttcacttccaaatatcccagata 32706900  T
Q  609 tccctttaagcatggtgttgcctcattttggaaaatgaagtgctgtttttaagattctcaatacgtaagctactgcagttttttgtgcaatgtctaaatt 708  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32706901 tccctttaagcatggtgttgcctcattttggaaaatgaagtgctgtttttaagattctcaatacgtaagctactgcagttttttgtgcaatgtctaaatt 32707000  T
Q  709 gtgccgctacggaaatattttactagcatgcgttggttatgaatatgaatataatgtgctttgacatctgctgctgtacaatataatgattgatat 804  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  32707001 gtgccgctacggaaatattttactagcatgcgttggttatgaatatgaatataatgtgcttttacatctgctgctgcacaatataatgattgatat 32707096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 32718581 - 32718651
Alignment:
Q  9 agatcattatttatttaactcagagagctagcttgatgcaatttctagcttcattacatatttaaatcatt 79  Q
    ||||| ||||||| | ||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||    
T  32718581 agatcgttatttagtgaactcagagagctggcttgatgcaatttctaccttgattacatatttaaatcatt 32718651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 32724986 - 32725056
Alignment:
Q  9 agatcattatttatttaactcagagagctagcttgatgcaatttctagcttcattacatatttaaatcatt 79  Q
    ||||| ||||||| | ||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||    
T  32724986 agatcgttatttagtgaactcagagagctggcttgatgcaatttctaccttgattacatatttaaatcatt 32725056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 12734929 - 12734982
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  ||||||||||  |||||||||||||||| ||||||||||||||||    
T  12734929 atttgatccatgtagtcgaccccacttagtgggataaggcttggttgttgttgt 12734982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Original strand, 14530530 - 14530562
Alignment:
Q  201 ccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||||||||||||||||||||||||||||    
T  14530530 ccacttagtgggataatgcttggttgttgttgt 14530562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 28960255 - 28960211
Alignment:
Q  189 atgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||||| |||| |||||||||||| ||||||||||||||||    
T  28960255 atgtagtcgactccatttagtgggataaggcttggttgttgttgt 28960211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 430 - 482
Target Start/End: Original strand, 32749254 - 32749306
Alignment:
Q  430 tttggatttctttgtttgtagagattgaaaattgttactgcgctgttttcact 482  Q
    ||||||||||| |||||||||||||||||||||| ||||  |||| |||||||    
T  32749254 tttggatttctatgtttgtagagattgaaaattggtactatgctgctttcact 32749306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 203 - 233
Target Start/End: Complemental strand, 8197571 - 8197541
Alignment:
Q  203 acttagtgggataatgcttggttgttgttgt 233  Q
    |||||||||||||||||||||||||||||||    
T  8197571 acttagtgggataatgcttggttgttgttgt 8197541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 203 - 233
Target Start/End: Complemental strand, 8202331 - 8202301
Alignment:
Q  203 acttagtgggataatgcttggttgttgttgt 233  Q
    |||||||||||||||||||||||||||||||    
T  8202331 acttagtgggataatgcttggttgttgttgt 8202301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 12474980 - 12474926
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgta 234  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||||    
T  12474980 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgta 12474926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 227418 - 227471
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  227418 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 227471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 1404214 - 1404161
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||| |||||| ||| || | ||||||||||||||||||||| |||||||    
T  1404214 atttgatgaatgtagccgactcaatttagtgggataatgcttggttattgttgt 1404161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 234
Target Start/End: Complemental strand, 2073339 - 2073306
Alignment:
Q  201 ccacttagtgggataatgcttggttgttgttgta 234  Q
    |||||||||||||||| |||||||||||||||||    
T  2073339 ccacttagtgggataaggcttggttgttgttgta 2073306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 3635376 - 3635323
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  3635376 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 3635323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 4807824 - 4807877
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  4807824 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 4807877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 9531653 - 9531600
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  9531653 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 9531600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 9556422 - 9556369
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| ||| ||||||||||||||| | ||||||||||||||||    
T  9556422 atttgatacatgtagccgactccacttagtgggatgaggcttggttgttgttgt 9556369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 12520115 - 12520062
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  12520115 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 12520062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 234
Target Start/End: Complemental strand, 13474254 - 13474213
Alignment:
Q  193 agtcgattccacttagtgggataatgcttggttgttgttgta 234  Q
    |||||| |||||||||||||||||  ||||||||||||||||    
T  13474254 agtcgactccacttagtgggataagacttggttgttgttgta 13474213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 17670697 - 17670750
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  17670697 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 17670750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 25834907 - 25834960
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  25834907 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 25834960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 28508907 - 28508960
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  28508907 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 28508960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 30306261 - 30306314
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  30306261 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 30306314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 230
Target Start/End: Complemental strand, 35715885 - 35715856
Alignment:
Q  201 ccacttagtgggataatgcttggttgttgt 230  Q
    ||||||||||||||||||||||||||||||    
T  35715885 ccacttagtgggataatgcttggttgttgt 35715856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 38328423 - 38328370
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  38328423 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 38328370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 38435181 - 38435234
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||| ||||||||||| |||| ||||||||||||||||    
T  38435181 atttgatccatgtagccgatcccacttagtggcataaggcttggttgttgttgt 38435234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 234
Target Start/End: Complemental strand, 38452718 - 38452685
Alignment:
Q  201 ccacttagtgggataatgcttggttgttgttgta 234  Q
    |||||||||||||||| |||||||||||||||||    
T  38452718 ccacttagtgggataaggcttggttgttgttgta 38452685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 41763096 - 41763043
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  41763096 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 41763043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 43573183 - 43573130
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  43573183 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 43573130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 292; Significance: 1e-163; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 292; E-Value: 1e-163
Query Start/End: Original strand, 525 - 894
Target Start/End: Original strand, 3001615 - 3001985
Alignment:
Q  525 acgattacaaattctactttccaagacacaggtatagcagctataggcgtggagcatcaatttcacttccaaatatcccagatatccctttaagcatggt 624  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  3001615 acgattacaaattctactctccaagacacaggtatagcaggtataggcgtggtgcatcaatttcacttccaaatatcccacatatccctttaagcatggt 3001714  T
Q  625 gttgcctcattttggaaaatgaagtgctgtttttaagattctcaatacgtaagctactgcagttttttgtgcaatgtctaaattg-tgccgctacggaaa 723  Q
    ||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  3001715 gttgcctcattttggaaaatgaagtgctgctttcaagatgctcaatacgtaagctactgcagttttttgtgcaatgtctaaattgttgccactacggaaa 3001814  T
Q  724 tattttactagcatgcgttggttatgaatatgaatataatgtgctttgacatctgctgctgtacaatataatgattgatatctaatgatatattgtacta 823  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||| |||||||||||| |||||    
T  3001815 tattttactagcatgtgttggttatgaatatgaatataatgtgctttggcatctgctgctgcacaatataatgattg-tatgtaatgatatattatacta 3001913  T
Q  824 aatgggatagtaatactatttaaaggttgcataaacggtaattgctgcagtttcttgtcc-aactttatgac 894  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  3001914 aatgggatagtaatactatttaaaggttgcataaatggtaattgctgcagtttcttgtccaaactttatgac 3001985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 184; E-Value: 4e-99
Query Start/End: Original strand, 144 - 391
Target Start/End: Original strand, 3000932 - 3001177
Alignment:
Q  144 tgggtggtgagttgcgtgttgtagtgtttattttttatttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgtacttaaaata 243  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||||||| ||||||||||||||||||||  ||||    
T  3000932 tgggtggtgagttgcgtgttgtagtgtttattttttatttgatggatgtagccgaccccacttagtgggataaggcttggttgttgttgtactt-caata 3001030  T
Q  244 ttattttagttgtgttggcctgttttgattggcaagatttttccttttgtttattaatatgctttcattttagctgaatatctgctatggctgctaggat 343  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  3001031 ttattttagttgtgttggcctgttttgattggcaagatttttcc-tttgtttattaatatgttttcattttagctgaagatctgctatggctgctaggat 3001129  T
Q  344 ataggcttataggatgaattatgtgcagtcatgattagtcaattttct 391  Q
    ||| |||||||||||||||||| |||||| | |||||||| |||||||    
T  3001130 atatgcttataggatgaattatttgcagtgacgattagtctattttct 3001177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 2999682 - 2999748
Alignment:
Q  18 tttatttaactcagagagctagcttgatgcaatttctagcttcattacatatttaaatcattgaata 84  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2999682 tttatttaactcagagagctagcttgatgcaatttctagcttcattacatatttaaatcattgaata 2999748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 432 - 506
Target Start/End: Original strand, 3001217 - 3001291
Alignment:
Q  432 tggatttctttgtttgtagagattgaaaattgttactgcgctgttttcactattactttttcctatatcagaatg 506  Q
    |||||||||||||||||||| ||||||||||| ||||| |||||||||||| ||||||||||||||| |||||||    
T  3001217 tggatttctttgtttgtagatattgaaaattggtactgtgctgttttcactgttactttttcctataccagaatg 3001291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 84
Target Start/End: Original strand, 7432420 - 7432467
Alignment:
Q  37 tagcttgatgcaatttctagcttcattacatatttaaatcattgaata 84  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||    
T  7432420 tagcttgatgcaatttgtagcttcattacatattgaaatcattgaata 7432467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 146
Target Start/End: Original strand, 3000803 - 3000849
Alignment:
Q  100 gtttccaacactagttatacaagaagagaagcgtgttcgctttgtgg 146  Q
    |||||||  |||||||||||||||||||||||| |||||||||||||    
T  3000803 gtttccagaactagttatacaagaagagaagcgcgttcgctttgtgg 3000849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 12492437 - 12492384
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||| |||||| |||  |||||||||||||||| ||||||||||||||||    
T  12492437 atttgatgcatgtagccgaccccacttagtgggataaggcttggttgttgttgt 12492384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 3302073 - 3302127
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgta 234  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||||    
T  3302073 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgta 3302127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 408547 - 408494
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  408547 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 408494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 4496613 - 4496666
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  4496613 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 4496666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 234
Target Start/End: Complemental strand, 10124420 - 10124387
Alignment:
Q  201 ccacttagtgggataatgcttggttgttgttgta 234  Q
    |||||||||||||||| |||||||||||||||||    
T  10124420 ccacttagtgggataaggcttggttgttgttgta 10124387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 234
Target Start/End: Complemental strand, 10989117 - 10989084
Alignment:
Q  201 ccacttagtgggataatgcttggttgttgttgta 234  Q
    |||||||||||||||| |||||||||||||||||    
T  10989117 ccacttagtgggataaggcttggttgttgttgta 10989084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 14665941 - 14665994
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  14665941 atttgatctatgtagccgaccccacttagtgggataaggcttggttgttgttgt 14665994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 234
Target Start/End: Complemental strand, 16913914 - 16913881
Alignment:
Q  201 ccacttagtgggataatgcttggttgttgttgta 234  Q
    |||||||||||||||| |||||||||||||||||    
T  16913914 ccacttagtgggataaggcttggttgttgttgta 16913881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 28976912 - 28976859
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  28976912 atttgattcatgtagccgaccccacttagtgggataaggcttggttgttgttgt 28976859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 29816611 - 29816664
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  29816611 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 29816664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 234
Target Start/End: Original strand, 32489296 - 32489329
Alignment:
Q  201 ccacttagtgggataatgcttggttgttgttgta 234  Q
    |||||||||||||||| |||||||||||||||||    
T  32489296 ccacttagtgggataaggcttggttgttgttgta 32489329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 72; Significance: 3e-32; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 9 - 84
Target Start/End: Complemental strand, 14903514 - 14903439
Alignment:
Q  9 agatcattatttatttaactcagagagctagcttgatgcaatttctagcttcattacatatttaaatcattgaata 84  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  14903514 agatcattatttatttaactcagagagctagcttgatgcaatttctagcttcattacatatttaaatcactgaata 14903439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 579647 - 579700
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||| |||||||||||||||| ||||||||||||||||    
T  579647 atttgatctatgtagccgatcccacttagtgggataaagcttggttgttgttgt 579700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 5096063 - 5096117
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgta 234  Q
    |||||||  |||||| |||| |||||||||||||||| | |||||||||||||||    
T  5096063 atttgatctatgtagccgatcccacttagtgggataaggtttggttgttgttgta 5096117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 9706999 - 9707053
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgta 234  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||||    
T  9706999 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgta 9707053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 34934883 - 34934829
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgta 234  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||||    
T  34934883 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgta 34934829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 12890804 - 12890857
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  12890804 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 12890857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 28085605 - 28085658
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  28085605 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 28085658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 31819060 - 31819113
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||  ||||||||||||||||||||||||||| |||||    
T  31819060 atttgatccatgtagccgaccccacttagtgggataatgcttggttgtggttgt 31819113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 34143818 - 34143765
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  ||||||||||  ||||||| |||||||| ||||||||||||||||    
T  34143818 atttgatccatgtagtcgaccccacttattgggataaggcttggttgttgttgt 34143765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 34156434 - 34156381
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  ||||||||||  ||||||| |||||||| ||||||||||||||||    
T  34156434 atttgatccatgtagtcgaccccacttattgggataaggcttggttgttgttgt 34156381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000005; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 48712119 - 48712074
Alignment:
Q  189 atgtagtcgattccacttagtgggataatgcttggttgttgttgta 234  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||    
T  48712119 atgtagttgatcccacttagtgggataatgcttggttgttgttgta 48712074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 25191606 - 25191659
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  ||||||  ||| |||||||||||||||||||||||||||||||||    
T  25191606 atttgatccatgtagctgatcccacttagtgggataatgcttggttgttgttgt 25191659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 233
Target Start/End: Original strand, 52139027 - 52139082
Alignment:
Q  178 ttatttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  52139027 ttatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 52139082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 31566214 - 31566160
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgta 234  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||||    
T  31566214 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgta 31566160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 40106673 - 40106619
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgta 234  Q
    |||||||  ||||||| ||  |||||||||||||||| |||||||||||||||||    
T  40106673 atttgatcaatgtagtggaccccacttagtgggataaggcttggttgttgttgta 40106619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 22301 - 22354
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  22301 atttgatctatgtagccgaccccacttagtgggataaagcttggttgttgttgt 22354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 311362 - 311309
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  311362 atttgatacatgtagccgaccccacttagtgggataaggcttggttgttgttgt 311309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 2133665 - 2133612
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  ||||| ||||  |||||||||||||||| ||||||||||||||||    
T  2133665 atttgatccatgtactcgaccccacttagtgggataaggcttggttgttgttgt 2133612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 5169061 - 5169114
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  5169061 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 5169114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 12096758 - 12096705
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  12096758 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 12096705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 234
Target Start/End: Original strand, 15296157 - 15296190
Alignment:
Q  201 ccacttagtgggataatgcttggttgttgttgta 234  Q
    |||||||||||||||| |||||||||||||||||    
T  15296157 ccacttagtgggataaggcttggttgttgttgta 15296190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 234
Target Start/End: Original strand, 27192473 - 27192506
Alignment:
Q  201 ccacttagtgggataatgcttggttgttgttgta 234  Q
    |||||||||||||||| |||||||||||||||||    
T  27192473 ccacttagtgggataaggcttggttgttgttgta 27192506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 31146928 - 31146981
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| ||| ||||||||||||||||| ||| ||||||||||||    
T  31146928 atttgatccatgtagccgactccacttagtgggataaggctcggttgttgttgt 31146981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 234
Target Start/End: Complemental strand, 43396114 - 43396081
Alignment:
Q  201 ccacttagtgggataatgcttggttgttgttgta 234  Q
    |||||||||||||||| |||||||||||||||||    
T  43396114 ccacttagtgggataaagcttggttgttgttgta 43396081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 234
Target Start/End: Complemental strand, 45289123 - 45289090
Alignment:
Q  201 ccacttagtgggataatgcttggttgttgttgta 234  Q
    |||||||||||||||| |||||||||||||||||    
T  45289123 ccacttagtgggataaggcttggttgttgttgta 45289090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 234
Target Start/End: Original strand, 45933375 - 45933408
Alignment:
Q  201 ccacttagtgggataatgcttggttgttgttgta 234  Q
    |||||||||||||||||||||||||| |||||||    
T  45933375 ccacttagtgggataatgcttggttgatgttgta 45933408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 48508464 - 48508517
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  48508464 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 48508517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 53262370 - 53262423
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  53262370 atttgatctatgtagccgaccccacttagtgggataaggcttggttgttgttgt 53262423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 54128608 - 54128661
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  54128608 atttgatccatgtaggcgaccccacttagtgggataaggcttggttgttgttgt 54128661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 16807 - 16861
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgta 234  Q
    |||||||  |||||| ||| ||||||||||||||||| |||||||||||||||||    
T  16807 atttgatctatgtagccgactccacttagtgggataaggcttggttgttgttgta 16861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.000000001; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 6957827 - 6957880
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||| |||||||||||||||| ||||||||||||||||    
T  6957827 atttgatccatgtagccgatcccacttagtgggataaggcttggttgttgttgt 6957880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 43434153 - 43434206
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  ||||||||||  |||||||||||||||| ||||||||||||||||    
T  43434153 atttgatccatgtagtcgagcccacttagtgggataaggcttggttgttgttgt 43434206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 32339797 - 32339841
Alignment:
Q  189 atgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||| |||| |||||||||||||| ||||||||||||||||    
T  32339797 atgtagtctattctacttagtgggataaggcttggttgttgttgt 32339841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 436458 - 436511
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  436458 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 436511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 232
Target Start/End: Original strand, 4548274 - 4548303
Alignment:
Q  203 acttagtgggataatgcttggttgttgttg 232  Q
    ||||||||||||||||||||||||||||||    
T  4548274 acttagtgggataatgcttggttgttgttg 4548303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 21528517 - 21528570
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  21528517 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 21528570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 234
Target Start/End: Complemental strand, 23906329 - 23906296
Alignment:
Q  201 ccacttagtgggataatgcttggttgttgttgta 234  Q
    |||||||||||||||| |||||||||||||||||    
T  23906329 ccacttagtgggataaggcttggttgttgttgta 23906296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 30634159 - 30634106
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  30634159 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 30634106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 31959867 - 31959814
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  31959867 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 31959814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 234
Target Start/End: Complemental strand, 38789655 - 38789622
Alignment:
Q  201 ccacttagtgggataatgcttggttgttgttgta 234  Q
    |||||||||||||||| |||||||||||||||||    
T  38789655 ccacttagtgggataaggcttggttgttgttgta 38789622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 234
Target Start/End: Complemental strand, 48622575 - 48622542
Alignment:
Q  201 ccacttagtgggataatgcttggttgttgttgta 234  Q
    |||||||||||||||| |||||||||||||||||    
T  48622575 ccacttagtgggataaggcttggttgttgttgta 48622542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 234
Target Start/End: Original strand, 49416957 - 49416990
Alignment:
Q  201 ccacttagtgggataatgcttggttgttgttgta 234  Q
    |||||||||||||||| |||||||||||||||||    
T  49416957 ccacttagtgggataaggcttggttgttgttgta 49416990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 50238668 - 50238615
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  50238668 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 50238615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 50238754 - 50238701
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  50238754 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 50238701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 234
Target Start/End: Original strand, 50471777 - 50471810
Alignment:
Q  201 ccacttagtgggataatgcttggttgttgttgta 234  Q
    |||||||||||||||| |||||||||||||||||    
T  50471777 ccacttagtgggataacgcttggttgttgttgta 50471810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 52569568 - 52569515
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  52569568 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 52569515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 55007975 - 55008028
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  55007975 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 55008028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 34; Significance: 0.000000001; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 3777313 - 3777260
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||| ||||||||| |||||||||||||||||||||||    
T  3777313 atttgatccatgtagccgatcccacttagtaggataatgcttggttgttgttgt 3777260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 6025834 - 6025887
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||||||||||||||||||||| |||||||||| ||||    
T  6025834 atttgatccatgtagccgattccacttagtgggataatacttggttgtttttgt 6025887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Original strand, 22930643 - 22930675
Alignment:
Q  201 ccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||||||||||||||||||||||||||||    
T  22930643 ccacttagtgggataatgcttggttgttgttgt 22930675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Complemental strand, 31274433 - 31274401
Alignment:
Q  201 ccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||||||||||||||||||||||||||||    
T  31274433 ccacttagtgggataatgcttggttgttgttgt 31274401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Original strand, 43898459 - 43898491
Alignment:
Q  201 ccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||||||||||||||||||||||||||||    
T  43898459 ccacttagtgggataatgcttggttgttgttgt 43898491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 200 - 234
Target Start/End: Complemental strand, 36339837 - 36339803
Alignment:
Q  200 tccacttagtgggataatgcttggttgttgttgta 234  Q
    |||||||||||||| ||||||||||||||||||||    
T  36339837 tccacttagtgggaaaatgcttggttgttgttgta 36339803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 230
Target Start/End: Original strand, 39140744 - 39140794
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgt 230  Q
    |||||||  |||||| |||  ||||||||||||||||||||||||||||||    
T  39140744 atttgattcatgtagccgaccccacttagtgggataatgcttggttgttgt 39140794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 49347446 - 49347392
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgta 234  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||||    
T  49347446 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgta 49347392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 52921309 - 52921363
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgta 234  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||||    
T  52921309 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgta 52921363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 696499 - 696552
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  696499 atttgatcaatgtagccgaccccacttagtgggataaggcttggttgttgttgt 696552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 1210974 - 1211027
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  1210974 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 1211027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 25979284 - 25979231
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  25979284 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 25979231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 29577481 - 29577534
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  29577481 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 29577534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 234
Target Start/End: Original strand, 29975449 - 29975482
Alignment:
Q  201 ccacttagtgggataatgcttggttgttgttgta 234  Q
    |||||||||||||||| |||||||||||||||||    
T  29975449 ccacttagtgggataaggcttggttgttgttgta 29975482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 30202183 - 30202130
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  30202183 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 30202130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 32079230 - 32079177
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    ||||||| ||||||| |||  |||||| ||||||||| ||||||||||||||||    
T  32079230 atttgatcgatgtagccgaccccacttggtgggataaggcttggttgttgttgt 32079177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 34444585 - 34444638
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  34444585 atttgatctatgtagccgaccccacttagtgggataaggcttggttgttgttgt 34444638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 234
Target Start/End: Complemental strand, 40568442 - 40568409
Alignment:
Q  201 ccacttagtgggataatgcttggttgttgttgta 234  Q
    |||||||||||||||| |||||||||||||||||    
T  40568442 ccacttagtgggataaggcttggttgttgttgta 40568409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 41560458 - 41560511
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  41560458 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 41560511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 234
Target Start/End: Original strand, 42337806 - 42337839
Alignment:
Q  201 ccacttagtgggataatgcttggttgttgttgta 234  Q
    |||||||||||||||| |||||||||||||||||    
T  42337806 ccacttagtgggataaggcttggttgttgttgta 42337839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 234
Target Start/End: Complemental strand, 43028840 - 43028807
Alignment:
Q  201 ccacttagtgggataatgcttggttgttgttgta 234  Q
    |||||||||||||||| |||||||||||||||||    
T  43028840 ccacttagtgggataaggcttggttgttgttgta 43028807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 43481851 - 43481798
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  43481851 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 43481798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 44941829 - 44941776
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  44941829 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 44941776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 50636310 - 50636363
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  ||||||||||||| |||||| ||||||| ||||| ||||||||||    
T  50636310 atttgatcaatgtagtcgattctacttagcgggataaggcttgattgttgttgt 50636363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 50846791 - 50846844
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||  ||||||||||||| |||||||||||||||||||    
T  50846791 atttgatctatgtagccgacaccacttagtgggaaaatgcttggttgttgttgt 50846844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 33; Significance: 0.000000005; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Complemental strand, 35643640 - 35643608
Alignment:
Q  201 ccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||||||||||||||||||||||||||||    
T  35643640 ccacttagtgggataatgcttggttgttgttgt 35643608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 82
Target Start/End: Original strand, 39851723 - 39851767
Alignment:
Q  38 agcttgatgcaatttctagcttcattacatatttaaatcattgaa 82  Q
    ||||||||| ||||| ||||||||||||||| |||||||||||||    
T  39851723 agcttgatgtaatttttagcttcattacatagttaaatcattgaa 39851767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 44529454 - 44529508
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgta 234  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||||    
T  44529454 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgta 44529508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 45419464 - 45419518
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgta 234  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||||    
T  45419464 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgta 45419518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 230
Target Start/End: Original strand, 1313814 - 1313843
Alignment:
Q  201 ccacttagtgggataatgcttggttgttgt 230  Q
    ||||||||||||||||||||||||||||||    
T  1313814 ccacttagtgggataatgcttggttgttgt 1313843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 1928640 - 1928587
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  1928640 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 1928587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 241
Target Start/End: Original strand, 4955420 - 4955481
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgtacttaaaa 241  Q
    |||||||  |||||||||||  ||||||||| ||||| | ||||||||||||||| ||||||    
T  4955420 atttgatttatgtagtcgatctcacttagtgagataaggtttggttgttgttgtatttaaaa 4955481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 10668550 - 10668497
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    ||||||| ||||||| |||   ||||||||||||||| ||||||||||||||||    
T  10668550 atttgatcgatgtagccgacctcacttagtgggataaggcttggttgttgttgt 10668497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 11523776 - 11523723
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  11523776 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 11523723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 12611735 - 12611780
Alignment:
Q  189 atgtagtcgattccacttagtgggataatgcttggttgttgttgta 234  Q
    |||||| |||| ||| |||||||||||| |||||||||||||||||    
T  12611735 atgtagccgatcccaattagtgggataaggcttggttgttgttgta 12611780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 14742135 - 14742082
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  14742135 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 14742082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 25473456 - 25473403
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  25473456 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 25473403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 234
Target Start/End: Original strand, 29520903 - 29520932
Alignment:
Q  205 ttagtgggataatgcttggttgttgttgta 234  Q
    ||||||||||||||||||||||||||||||    
T  29520903 ttagtgggataatgcttggttgttgttgta 29520932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 32276914 - 32276967
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  32276914 atttgatccatgtagacgaacccacttagtgggataaagcttggttgttgttgt 32276967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 36545378 - 36545431
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  36545378 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 36545431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 33; Significance: 0.000000005; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 12966254 - 12966298
Alignment:
Q  189 atgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||| |||| |||||||||||||||| ||||||||||||||||    
T  12966254 atgtagccgatcccacttagtgggataaggcttggttgttgttgt 12966298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 33732061 - 33732115
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgta 234  Q
    |||||||  |||||| || | |||||||||||||||| |||||||||||||||||    
T  33732061 atttgatccatgtagccggtcccacttagtgggataaggcttggttgttgttgta 33732115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 230
Target Start/End: Complemental strand, 40149066 - 40149016
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgt 230  Q
    |||||||  |||||| ||| ||||||||||||||||| |||||||||||||    
T  40149066 atttgatctatgtagccgaatccacttagtgggataaggcttggttgttgt 40149016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 40979981 - 40979927
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgta 234  Q
    |||||||  |||||| |||  |||||||||||||||| |||||||||||||||||    
T  40979981 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgta 40979927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 48919341 - 48919395
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgta 234  Q
    |||||||  ||||||||||  ||||||| |||||||| |||||||||||||||||    
T  48919341 atttgatccatgtagtcgaccccacttaatgggataaggcttggttgttgttgta 48919395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 1011275 - 1011328
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  1011275 atttgatctatgtagccgaccccacttagtgggataaggcttggttgttgttgt 1011328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 2885775 - 2885722
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  2885775 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 2885722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 5418303 - 5418356
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  ||||||||||  ||| |||||||||||| ||||||||||||||||    
T  5418303 atttgatccatgtagtcgaccccatttagtgggataaggcttggttgttgttgt 5418356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 11594189 - 11594242
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  11594189 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 11594242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 12841328 - 12841275
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  12841328 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 12841275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 22349849 - 22349902
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  ||||||||||  |||||||||||||||| ||||| ||||||||||    
T  22349849 atttgatccatgtagtcgaccccacttagtgggataaggcttgattgttgttgt 22349902  T

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Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 27649009 - 27649062
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  27649009 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 27649062  T

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Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 28208381 - 28208328
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  28208381 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 28208328  T

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Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 29650613 - 29650666
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  29650613 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 29650666  T

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Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 31005434 - 31005487
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  31005434 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 31005487  T

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Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 31682655 - 31682602
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  31682655 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 31682602  T

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Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 31869155 - 31869102
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  31869155 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 31869102  T

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Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 32631793 - 32631846
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  32631793 atttgatctatgtagccgaccccacttagtgggataaggcttggttgttgttgt 32631846  T

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Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 33073158 - 33073211
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||| |||||||||||||||| ||||||||||| ||||    
T  33073158 atttgatccatgtagccgatcccacttagtgggataaggcttggttgttattgt 33073211  T

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Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 36101830 - 36101777
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  ||||||| ||  |||||||||||||||| ||||||||||||||||    
T  36101830 atttgatccatgtagttgaccccacttagtgggataaggcttggttgttgttgt 36101777  T

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Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 37618174 - 37618227
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  37618174 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 37618227  T

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Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 39906425 - 39906372
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  39906425 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 39906372  T

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Target: scaffold0168 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 28942 - 28889
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  28942 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 28889  T

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Target: scaffold0018 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 31697 - 31750
Alignment:
Q  180 atttgatggatgtagtcgattccacttagtgggataatgcttggttgttgttgt 233  Q
    |||||||  |||||| |||  |||||||||||||||| ||||||||||||||||    
T  31697 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 31750  T

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