View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2226R-Insertion-5 (Length: 665)
Name: NF2226R-Insertion-5
Description: NF2226R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2226R-Insertion-5 |
 | |
|
| [»] chr5 (5 HSPs) |
| |
|
| [»] chr4 (15 HSPs) |
| |
|
| [»] chr3 (11 HSPs) |
| |
|
| [»] chr8 (4 HSPs) |
| |
|
| [»] chr6 (10 HSPs) |
| |
|
| [»] scaffold0074 (1 HSPs) |
| | |
|
Alignment Details
Target: chr5 (Bit Score: 600; Significance: 0; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 600; E-Value: 0
Query Start/End: Original strand, 14 - 665
Target Start/End: Original strand, 41718154 - 41718804
Alignment:
| Q |
14 |
tgtgaacatgtgtgaacacataagccataaagtcaccttttgttgatatgttttcacatggcagtaatacatgtttgacaaaagggctttgcaatttacc |
113 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
41718154 |
tgtgaacatgtgtgaacacataagccataaagtcaccttttgttgatatgttttcacatggcagtaatacatgtttgacaaaagggttttgcaatttacc |
41718253 |
T |
|
| Q |
114 |
attcagattttcggtgccaacattgtcaacataaattggttggcagtttggctattatctatggtaataaatgaaaatggttgaggcatggcttttacgg |
213 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41718254 |
attcagattttcggtgccaacattgtcaacataaattggttggcagtttggctattatctatggtaataaatgaaaatggttgaggcatggcttttacgg |
41718353 |
T |
|
| Q |
214 |
tcctataaatagcatgtcccttgcaccattctactcatcccaaatcagtaacaacacaagaacaagtaaagcttgtttagagtagtgagagaaaaaatat |
313 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
41718354 |
tcctataaatagcatgtcccttgcaccattctactcatcccaaatcagtaacaacacaagaacaagtaaagcttgtttaga-tagtgagagaaaaaatat |
41718452 |
T |
|
| Q |
314 |
agagagaaaaattagtttctcctgtgaggtttctcctagttcgtgttagtttgtattctcctatttataagagagagtggtaattgtactctccttgtat |
413 |
Q |
| |
|
|||||| |||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
41718453 |
agagaggaaaaatagtttctcctgtgaggtttctcctagtttgtgttagttagtattctcctatttataagagagagtggtatttgtactctccttgtag |
41718552 |
T |
|
| Q |
414 |
ttagagagaggtcctgtaatttcttccacttagtgaaagttctctactcttaccccgtggttttttccccttatttcttgaggggtttccacgtaaaata |
513 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
41718553 |
ttagagagaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaata |
41718652 |
T |
|
| Q |
514 |
ttgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaacagtggtatcagagcccttggttcgta |
613 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
41718653 |
ttgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaacagtggtatcagagccgctggttcgta |
41718752 |
T |
|
| Q |
614 |
gctgttattccgctgtgataaactagtggagtggtaagaaaaatcttagtat |
665 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41718753 |
gctgttattccgctgtgataaactagtggagtggtaagaaaaatcttagtat |
41718804 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 533; E-Value: 0
Query Start/End: Original strand, 12 - 588
Target Start/End: Original strand, 41722878 - 41723453
Alignment:
| Q |
12 |
attgtgaacatgtgtgaacacataagccataaagtcaccttttgttgatatgttttcacatggcagtaatacatgtttgacaaaagggctttgcaattta |
111 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
41722878 |
attgtgaacatgtgtgaacacataagccataaagtcaccttttgttgatatgttttcacatggcagtaatacatgtttgacaaaagggttttgcaattta |
41722977 |
T |
|
| Q |
112 |
ccattcagattttcggtgccaacattgtcaacataaattggttggcagtttggctattatctatggtaataaatgaaaatggttgaggcatggcttttac |
211 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41722978 |
ccattcagattttcggtgccaacattgtcaacataaattggttggcagtttggctattatctatggtaataaatgaaaatggttgaggcatggcttttac |
41723077 |
T |
|
| Q |
212 |
ggtcctataaatagcatgtcccttgcaccattctactcatcccaaatcagtaacaacacaagaacaagtaaagcttgtttagagtagtgagagaaaaaat |
311 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
41723078 |
ggtcctataaatagcatgtcccttgcaccattctactcatcccaaatcagtaacaacacaagaacaagtaaagcttgtttaga-tagtgagagaaaaaat |
41723176 |
T |
|
| Q |
312 |
atagagagaaaaattagtttctcctgtgaggtttctcctagttcgtgttagtttgtattctcctatttataagagagagtggtaattgtactctccttgt |
411 |
Q |
| |
|
|||||||| |||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
41723177 |
atagagaggaaaaatagtttctcctgtgaggtttctcctagtttgtgttagttagtattctcctatttataagagagagtggtatttgtactctccttgt |
41723276 |
T |
|
| Q |
412 |
atttagagagaggtcctgtaatttcttccacttagtgaaagttctctactcttaccccgtggttttttccccttatttcttgaggggtttccacgtaaaa |
511 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
41723277 |
agttagagagaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaa |
41723376 |
T |
|
| Q |
512 |
tattgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaaca |
588 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41723377 |
tattgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaaca |
41723453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 305; E-Value: 1e-171
Query Start/End: Original strand, 248 - 588
Target Start/End: Original strand, 34359934 - 34360273
Alignment:
| Q |
248 |
tcatcccaaatcagtaacaacacaagaacaagtaaagcttgtttagagtagtgagagaaaaaatatagagagaaaaattagtttctcctgtgaggtttct |
347 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
34359934 |
tcatcccaaatcagtaacaacacaagaacaagtaaagcttgtttaga-tagtgagagaaaaaatatagagagaaaaattagtttctcctgtgagatttct |
34360032 |
T |
|
| Q |
348 |
cctagttcgtgttagtttgtattctcctatttataagagagagtggtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttagt |
447 |
Q |
| |
|
||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
34360033 |
cctagtttgtgttagttagtattctcctatttataagagagagtggtaattgtactctccttgtagttagagagaggtcctgtaatttcttccacttagt |
34360132 |
T |
|
| Q |
448 |
gaaagttctctactcttaccccgtggttttttccccttatttcttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttat |
547 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34360133 |
gaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttctacgtaaaatattgtgtgttcagttcctcttttctcgtctcttat |
34360232 |
T |
|
| Q |
548 |
tttagctgcgtgataatattttgttactctggtacctaaca |
588 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34360233 |
tttagctgcgtgataatattttgttactctggtacctaaca |
34360273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 248 - 588
Target Start/End: Complemental strand, 29585640 - 29585300
Alignment:
| Q |
248 |
tcatcccaaatcagtaacaacacaagaacaagtaaagcttgtttagagtagtgagagaaaaaatatagagagaaaaattagtttctcctgtgaggtttct |
347 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29585640 |
tcatcccaaatcagtaacaacacaacaacaagtaaagcttgtctagagtagtgagaggaaaaatatagagagaaaaattagtttctcctgtgaggtttct |
29585541 |
T |
|
| Q |
348 |
cctagttcgtgttagtttgtattctcctatttataagagagagtggtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttagt |
447 |
Q |
| |
|
||||||| || |||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
29585540 |
cctagtttgtattagttagtattctcctatttataagagagagtggtaattgtactctctttgtagttagagagaggtcctgtaatttcttccacttagt |
29585441 |
T |
|
| Q |
448 |
gaaagttctctactcttaccccgtggttttttccccttatttcttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttat |
547 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29585440 |
gaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttat |
29585341 |
T |
|
| Q |
548 |
tttagctgcgtgataatattttgttactctggtacctaaca |
588 |
Q |
| |
|
||||||||| ||||||||||||||||||||| ||||||||| |
|
|
| T |
29585340 |
tttagctgcatgataatattttgttactctgatacctaaca |
29585300 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 290; E-Value: 1e-162
Query Start/End: Original strand, 248 - 569
Target Start/End: Original strand, 34352226 - 34352546
Alignment:
| Q |
248 |
tcatcccaaatcagtaacaacacaagaacaagtaaagcttgtttagagtagtgagagaaaaaatatagagagaaaaattagtttctcctgtgaggtttct |
347 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
34352226 |
tcatcccaaatcagtaacaacacaagaacaagtaaagcttgtttaga-tagtgagagaaaaaatatagagagaaaaattagtttctcctgtgagatttct |
34352324 |
T |
|
| Q |
348 |
cctagttcgtgttagtttgtattctcctatttataagagagagtggtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttagt |
447 |
Q |
| |
|
||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
34352325 |
cctagtttgtgttagttagtattctcctatttataagagagagtggtaattgtactctccttgtagttagagagaggtcctgtaatttcttccacttagt |
34352424 |
T |
|
| Q |
448 |
gaaagttctctactcttaccccgtggttttttccccttatttcttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttat |
547 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34352425 |
gaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttat |
34352524 |
T |
|
| Q |
548 |
tttagctgcgtgataatatttt |
569 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
34352525 |
tttagctgcgtgataatatttt |
34352546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 402; Significance: 0; HSPs: 15)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 402; E-Value: 0
Query Start/End: Original strand, 180 - 665
Target Start/End: Complemental strand, 48702228 - 48701744
Alignment:
| Q |
180 |
ataaatgaaaatggttgaggcatggcttttacggtcctataaatagcatgtcccttgcaccattctactcatcccaaatcagtaacaacacaagaacaag |
279 |
Q |
| |
|
||||||| || |||||| ||||||||| || | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48702228 |
ataaatgcaattggttggggcatggctctttcactagtataaatagcatgtcccttgcaccattctactcatcccaaatcagtaacaacacaagaacaag |
48702129 |
T |
|
| Q |
280 |
taaagcttgtttagagtagtgagagaaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctagttcgtgttagtttgtattctcctattt |
379 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||||| |
|
|
| T |
48702128 |
taaagcttgtttaga-tagtgagagaaaaaatatagagaggaaaaatagtttctcctgtgaggtttctcctagtttgtgttagttagtattctcctattt |
48702030 |
T |
|
| Q |
380 |
ataagagagagtggtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttagtgaaagttctctactcttaccccgtggtttttt |
479 |
Q |
| |
|
|||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
48702029 |
ataagagagagtggtatttgtactctccttgtagttagagagaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggtttttt |
48701930 |
T |
|
| Q |
480 |
ccccttatttcttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctgg |
579 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48701929 |
ccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctgg |
48701830 |
T |
|
| Q |
580 |
tacctaacagtggtatcagagcccttggttcgtagctgttattccgctgtgataaactagtggagtggtaagaaaaatcttagtat |
665 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48701829 |
tacctaacagtggtatcagagccgctggttcgtagctgttattccgctgtgataaactagtggagtggtaagaaaaatcttagtat |
48701744 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 372; E-Value: 0
Query Start/End: Original strand, 250 - 665
Target Start/End: Original strand, 42265883 - 42266297
Alignment:
| Q |
250 |
atcccaaatcagtaacaacacaagaacaagtaaagcttgtttagagtagtgagagaaaaaatatagagagaaaaattagtttctcctgtgaggtttctcc |
349 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||| |||||||||||||||||||| |
|
|
| T |
42265883 |
atcccaaatcagtaacaacacaagaacaagtaaagcttgtttaga-tagtgagagaaaaaatatagagaggaaaaatagcttctcctgtgaggtttctcc |
42265981 |
T |
|
| Q |
350 |
tagttcgtgttagtttgtattctcctatttataagagagagtggtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttagtga |
449 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42265982 |
tagtttgtgttagtttgtattctcctatttataagagagagtggtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttagtga |
42266081 |
T |
|
| Q |
450 |
aagttctctactcttaccccgtggttttttccccttatttcttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattt |
549 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42266082 |
aagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattt |
42266181 |
T |
|
| Q |
550 |
tagctgcgtgataatattttgttactctggtacctaacagtggtatcagagcccttggttcgtagctgttattccgctgtgataaactagtggagtggta |
649 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42266182 |
tagctgcgtgataatattttgttactctggtatctaacagtggtatcagagccgctggttcgtagctgttattccgctgtgataaactagtggagtggta |
42266281 |
T |
|
| Q |
650 |
agaaaaatcttagtat |
665 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
42266282 |
agaaaaatcttagtat |
42266297 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 180 - 665
Target Start/End: Complemental strand, 30950607 - 30950106
Alignment:
| Q |
180 |
ataaatgaaaatggttgaggcatggcttttacggtcctataaatagcatgtcccttgcaccattctactcatcccaaatcagtaacaacacaagaacaa- |
278 |
Q |
| |
|
||||||| || |||||| ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||| ||||||||||| | ||||| |
|
|
| T |
30950607 |
ataaatgcaattggttggggcatggctctttcactagtataaatagcatgtcccttgcaccattctactcatcccaaattagtaacaacaccataacaaa |
30950508 |
T |
|
| Q |
279 |
gtaaagc---------ttgtt-----tagagtagtgagagaaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctagttcgtgttagt- |
363 |
Q |
| |
|
|||| | ||||| |||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |
|
|
| T |
30950507 |
gtaacacaacaactacttgttcttagtagaatagagagaggaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctaggtagtgttagtg |
30950408 |
T |
|
| Q |
364 |
-ttgtattctcctatttataagagagagtggtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttagtgaaagttctctactc |
462 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
30950407 |
tttgtattctcctatttataagagagagtggtaattgtactttccttgtatttagagagaggttctgtaatttcttccacttagtgaaagttctctactc |
30950308 |
T |
|
| Q |
463 |
ttaccccgtggttttttccccttatttcttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgata |
562 |
Q |
| |
|
|| ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| |
|
|
| T |
30950307 |
ttgccccgtggttttttccc-ttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcttatcttattttagctgcgtgata |
30950209 |
T |
|
| Q |
563 |
atattttgttactctggtacctaacagtggtatcagagcccttggttcgtagctgttattccgctgtgataaactagtggagtggtaagaaaaatcttag |
662 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30950208 |
atattttgttactctggtacctaacagtggtatcagagctcctggttcgtagctgttattccgctgtgataaactagtggagtggtaagaaaaatcttag |
30950109 |
T |
|
| Q |
663 |
tat |
665 |
Q |
| |
|
||| |
|
|
| T |
30950108 |
tat |
30950106 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 180 - 588
Target Start/End: Complemental strand, 48697539 - 48697131
Alignment:
| Q |
180 |
ataaatgaaaatggttgaggcatggcttttacggtcctataaatagcatgtcccttgcaccattctactcatcccaaatcagtaacaacacaagaacaag |
279 |
Q |
| |
|
||||||| || |||||| ||||||||| || | | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48697539 |
ataaatgcaattggttggggcatggctctttcactagtataaatagcatgtcccttgcattattctactcatcccaaatcagtaacaacacaagaacaag |
48697440 |
T |
|
| Q |
280 |
taaagcttgtttagagtagtgagagaaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctagttcgtgttagtttgtattctcctattt |
379 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||||| |
|
|
| T |
48697439 |
taaagcttgtttaga-tagtgagagaaaaaatatagagaggaaaaatagtttctcctgtgaggtttctcctagtttgtgttagttagtattctcctattt |
48697341 |
T |
|
| Q |
380 |
ataagagagagtggtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttagtgaaagttctctactcttaccccgtggtt-ttt |
478 |
Q |
| |
|
|||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |
|
|
| T |
48697340 |
ataagagagagtggtatttgtactctccttgtagttagagagaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggtttttt |
48697241 |
T |
|
| Q |
479 |
tccccttatttcttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctg |
578 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48697240 |
tccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcttctcttattttagctgcgtgataatattttgttactctg |
48697141 |
T |
|
| Q |
579 |
gtacctaaca |
588 |
Q |
| |
|
|||||||||| |
|
|
| T |
48697140 |
gtacctaaca |
48697131 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 305; E-Value: 1e-171
Query Start/End: Original strand, 250 - 590
Target Start/End: Original strand, 42270602 - 42270941
Alignment:
| Q |
250 |
atcccaaatcagtaacaacacaagaacaagtaaagcttgtttagagtagtgagagaaaaaatatagagagaaaaattagtttctcctgtgaggtttctcc |
349 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||| |||||||||||||||||||| |
|
|
| T |
42270602 |
atcccaaatcagtaacaacacaagaacaagtaaagcttgtttaga-tagtgagagaaaaaatatagagaggaaaaatagcttctcctgtgaggtttctcc |
42270700 |
T |
|
| Q |
350 |
tagttcgtgttagtttgtattctcctatttataagagagagtggtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttagtga |
449 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42270701 |
tagtttgtgttagtttgtattctcctatttataagagagagtggtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttagtga |
42270800 |
T |
|
| Q |
450 |
aagttctctactcttaccccgtggttttttccccttatttcttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattt |
549 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42270801 |
aagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattt |
42270900 |
T |
|
| Q |
550 |
tagctgcgtgataatattttgttactctggtacctaacagt |
590 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
42270901 |
tagctgcgtgataatattttgttactctggtatctaacagt |
42270941 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 249 - 582
Target Start/End: Complemental strand, 24520363 - 24520031
Alignment:
| Q |
249 |
catcccaaatcagtaacaacacaagaacaagtaaagcttgtttagagtagtgagagaaaaaatatagagagaaaaattagtttctcctgtgaggtttctc |
348 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||| |
|
|
| T |
24520363 |
catcccaaatcagtaacaacacaagaacaagtaaagcttgtttaga-tagtgagagaaaaaatatagagaggaaaaatagtttctcctgtgaggtttctc |
24520265 |
T |
|
| Q |
349 |
ctagttcgtgttagtttgtattctcctatttataagagagagtggtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttagtg |
448 |
Q |
| |
|
|||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
24520264 |
ctagtttgtgttagttagtattctcctatttataagagagagtggtaattgtactctccttgtagttagagagaggtcctgtaatttcttccacttagtg |
24520165 |
T |
|
| Q |
449 |
aaagttctctactcttaccccgtggttttttccccttatttcttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttatt |
548 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24520164 |
aaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttatt |
24520065 |
T |
|
| Q |
549 |
ttagctgcgtgataatattttgttactctggtac |
582 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||| |
|
|
| T |
24520064 |
ttagttgcgtgataatattttgttactctggtac |
24520031 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 180 - 589
Target Start/End: Complemental strand, 30945901 - 30945476
Alignment:
| Q |
180 |
ataaatgaaaatggttgaggcatggcttttacggtcctataaatagcatgtcccttgcaccattctactcatcccaaatcagtaacaacacaagaacaa- |
278 |
Q |
| |
|
||||||| || |||||| ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
30945901 |
ataaatgcaattggttggggcatggctctttcactagtataaatagcatgtcccttgcaccattctactcatcccaaattagtaacaacaccagaacaaa |
30945802 |
T |
|
| Q |
279 |
gtaaagc---------ttgtt-----tagagtagtgagagaaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctagttcgtgttagt- |
363 |
Q |
| |
|
|||| | ||||| |||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |
|
|
| T |
30945801 |
gtaacacaacaactacttgttcttagtagaatagagagaggaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctaggtagtgttagtg |
30945702 |
T |
|
| Q |
364 |
-ttgtattctcctatttataagagagagtggtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttagtgaaagttctctactc |
462 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
30945701 |
tttgtattctcctatttataagagagagtggtaattgtactctccttgtatttagagagaggttctgtaatttcttccacttagtgaaagttctctactc |
30945602 |
T |
|
| Q |
463 |
ttaccccgtggttttttccccttatttcttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgata |
562 |
Q |
| |
|
|| ||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
30945601 |
ttgccccgtgatttttt-cccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcttctcttattttagctgcgtgata |
30945503 |
T |
|
| Q |
563 |
atattttgttactctggtacctaacag |
589 |
Q |
| |
|
|||||||||||||||| |||||||||| |
|
|
| T |
30945502 |
atattttgttactctgatacctaacag |
30945476 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 297 - 588
Target Start/End: Original strand, 10427315 - 10427597
Alignment:
| Q |
297 |
agtgagagaaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctagttcgtgttagtttgtattctcctatttataagagagagtggtaa |
396 |
Q |
| |
|
|||||||| |||||||||||||| ||| |||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||| ||||| |
|
|
| T |
10427315 |
agtgagaggaaaaatatagagaggaaatatagtttctcctgtgaggtttctcctagt--------gttagtattctcctatttc-aagagagag-ggtaa |
10427404 |
T |
|
| Q |
397 |
ttgtactctccttgtatttagagagaggtcctgtaatt-tcttccacttagtgaaagttctctactcttaccccgtggttttttccccttatttcttgag |
495 |
Q |
| |
|
|| ||||||||||||||||||||| ||| ||||||| |||||||||||||||||||| |||||| || |||||| ||||||||||||||||| ||||| |
|
|
| T |
10427405 |
tttgtctctccttgtatttagagagaagtcttgtaattgtcttccacttagtgaaagttatctactttttccccgtagttttttccccttatttgttgag |
10427504 |
T |
|
| Q |
496 |
gggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaaca |
588 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| |
|
|
| T |
10427505 |
gggtttccgcgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagttgcgtgataatattctgttactctggtacctaaca |
10427597 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 380 - 575
Target Start/End: Original strand, 48782850 - 48783031
Alignment:
| Q |
380 |
ataagagagagtggtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttagtgaaagttctctactcttaccccgtggtttttt |
479 |
Q |
| |
|
||||||||||||||||||||||||| | |||||||||||||||||| | ||||||||||||||||||||||||||| |||| || ||||| |
|
|
| T |
48782850 |
ataagagagagtggtaattgtactc--catgtatttagagagaggtcatctaatttcttccacttagtgaaagttct---------ccccatg--ttttt |
48782936 |
T |
|
| Q |
480 |
ccccttatttcttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttact |
575 |
Q |
| |
|
||| |||||| ||||| ||||||||| |||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||| |||| |
|
|
| T |
48782937 |
ccctttatttgttgagaaatttccacgt-aaatattgtgtgttcagttcctgttttctcgtttcttattttaatcgcgtgataatattttgatact |
48783031 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 336 - 480
Target Start/End: Original strand, 1979253 - 1979391
Alignment:
| Q |
336 |
tgtgaggtttctcctagttcgtgttagtttgtattctcctatttataagagagagtggtaattgtactctccttgtatttagagagaggtcctgtaattt |
435 |
Q |
| |
|
||||||||||||||| ||| ||| |||| |||||||| |||||||||||||||||||| | ||| ||||||| |||| ||||||||| |||||||| |
|
|
| T |
1979253 |
tgtgaggtttctcctggttagtgctagt----attctcctgtttataagagagagtggtaaatataccctccttgcattt--agagaggtcgtgtaattt |
1979346 |
T |
|
| Q |
436 |
cttccacttagtgaaagttctctactcttaccccgtggttttttc |
480 |
Q |
| |
|
||||| |||| |||||||| |||||||||||| | || ||||||| |
|
|
| T |
1979347 |
cttcctcttactgaaagttatctactcttacctcatgcttttttc |
1979391 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 437 - 535
Target Start/End: Original strand, 17248015 - 17248112
Alignment:
| Q |
437 |
ttccacttagtgaaagttctctactcttaccccgtggttttttccccttatttcttgaggggtttccacgtaaaatattgtgtgttcagttcctctttt |
535 |
Q |
| |
|
||||||||| |||||||||| |||||||| || |||||||||||||||||||| || |||| |||||| || ||||||||||| || |||| ||||||| |
|
|
| T |
17248015 |
ttccacttaatgaaagttctatactcttatccggtggttttttccccttatttattaagggatttccatgt-aaatattgtgtatttagtttctctttt |
17248112 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 509 - 586
Target Start/End: Complemental strand, 36615438 - 36615361
Alignment:
| Q |
509 |
aaatattgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaa |
586 |
Q |
| |
|
||||| ||| ||||| ||| |||||||||| | |||||||||| ||| | ||||||||||| ||||||| |||||||| |
|
|
| T |
36615438 |
aaataatgtatgttcggtttctcttttctcatatcttattttaactgtgcgataatattttattactctagtacctaa |
36615361 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 509 - 577
Target Start/End: Original strand, 30165900 - 30165968
Alignment:
| Q |
509 |
aaatattgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactct |
577 |
Q |
| |
|
||||||| |||||||| ||| | ||||||| | ||||||||||| || |||||| |||||||||||||| |
|
|
| T |
30165900 |
aaatattatgtgttcaattcattttttctcatatcttattttagttgtgtgatattattttgttactct |
30165968 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 568 - 609
Target Start/End: Original strand, 1999189 - 1999230
Alignment:
| Q |
568 |
ttgttactctggtacctaacagtggtatcagagcccttggtt |
609 |
Q |
| |
|
|||||| |||| |||||||||||||||||||||| ||||||| |
|
|
| T |
1999189 |
ttgttattctgatacctaacagtggtatcagagcacttggtt |
1999230 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 64 - 157
Target Start/End: Original strand, 48781266 - 48781360
Alignment:
| Q |
64 |
ttttcacatggcagtaatacatgtttgacaaaagggc--tttgcaatttaccattcagattttcggtgccaacattgtcaacataaattggttggc |
157 |
Q |
| |
|
||||||||||||||||| | |||||||| ||||||| ||||| ||||| |||| | ||||| ||||| | ||| ||||||||||||||||||| |
|
|
| T |
48781266 |
ttttcacatggcagtaaaaggtgtttgacgaaagggctttttgc-atttaacatttatatttttggtgcatatattttcaacataaattggttggc |
48781360 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 373; Significance: 0; HSPs: 11)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 373; E-Value: 0
Query Start/End: Original strand, 249 - 665
Target Start/End: Complemental strand, 5823613 - 5823198
Alignment:
| Q |
249 |
catcccaaatcagtaacaacacaagaacaagtaaagcttgtttagagtagtgagagaaaaaatatagagagaaaaattagtttctcctgtgaggtttctc |
348 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||| |
|
|
| T |
5823613 |
catcccaaatcagtaacaacacaagaacaagtaaagcttgtttaga-tagtgagagaaaaaatatagagaggaaaaatagtttctcctgtgaggtttctc |
5823515 |
T |
|
| Q |
349 |
ctagttcgtgttagtttgtattctcctatttataagagagagtggtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttagtg |
448 |
Q |
| |
|
|||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
5823514 |
ctagtttgtgttagttagtattctcctatttataagagagagtggtaattgtactctccttgtagttagagagaggtcctgtaatttcttccacttagtg |
5823415 |
T |
|
| Q |
449 |
aaagttctctactcttaccccgtggttttttccccttatttcttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttatt |
548 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5823414 |
aaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttatt |
5823315 |
T |
|
| Q |
549 |
ttagctgcgtgataatattttgttactctggtacctaacagtggtatcagagcccttggttcgtagctgttattccgctgtgataaactagtggagtggt |
648 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5823314 |
ttagctgcgtgataatattttgttactctggtacctaacagtggtatcagagccgctggttcgtagctgttattccgctgtgataaactagtggagtggt |
5823215 |
T |
|
| Q |
649 |
aagaaaaatcttagtat |
665 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
5823214 |
aagaaaaatcttagtat |
5823198 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 297; E-Value: 1e-166
Query Start/End: Original strand, 248 - 588
Target Start/End: Complemental strand, 5818852 - 5818513
Alignment:
| Q |
248 |
tcatcccaaatcagtaacaacacaagaacaagtaaagcttgtttagagtagtgagagaaaaaatatagagagaaaaattagtttctcctgtgaggtttct |
347 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||| |
|
|
| T |
5818852 |
tcatcccaaatcagtaacaacacaagaacaagtaaagcttgtttaga-tagtgagagaaaaaatatagagaggaaaaatagtttctcctgtgaggtttct |
5818754 |
T |
|
| Q |
348 |
cctagttcgtgttagtttgtattctcctatttataagagagagtggtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttagt |
447 |
Q |
| |
|
||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
5818753 |
cctagtttgtgttagttagtattctcctatttataagagagagtggtaattgtactctccttgtagttagagagaggtcctgtaatttcttccacttagt |
5818654 |
T |
|
| Q |
448 |
gaaagttctctactcttaccccgtggttttttccccttatttcttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttat |
547 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5818653 |
gaaagttctctactcttgccccgtggttttttccccttattagttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttat |
5818554 |
T |
|
| Q |
548 |
tttagctgcgtgataatattttgttactctggtacctaaca |
588 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
5818553 |
tttagttgcgtgataatattttgttactctggtacctaaca |
5818513 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 180 - 665
Target Start/End: Complemental strand, 2817658 - 2817186
Alignment:
| Q |
180 |
ataaatgaaaatggttgaggcatggcttttacggtcctataaatagcatgtcccttgcaccattctactcatcccaaatcagtaacaacacaagaacaag |
279 |
Q |
| |
|
||||||| || |||||| ||||||||| || | | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2817658 |
ataaatgcaattggttggggcatggctctttcactagtatacatagcatgtcccttgcaccattctactcatcccaaatcagtaacaacacaagaacaag |
2817559 |
T |
|
| Q |
280 |
taaagcttgtttagagtagtgagagaaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctagttcgtgttagtttgtattctcctattt |
379 |
Q |
| |
|
|||| ||||||||| ||| ||||||||||||||||||||| |||| ||||||||||| |||| || |||||| |||||||||||||| |
|
|
| T |
2817558 |
taaaacttgtttagggtaatgagagaaaaaatatagagaggaaaaatagtttctcct--------------agtttgtattagttagtattctcctattt |
2817473 |
T |
|
| Q |
380 |
ataagagagag--tggtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttagtgaaagttctctactcttaccccgtggtttt |
477 |
Q |
| |
|
||||||||||| |||| |||||||||||||||||||||||||||| || |||||||||||||||||||||| |||||| ||||||| ||| |||||||| |
|
|
| T |
2817472 |
ataagagagagagtggtgattgtactctccttgtatttagagagagttcttgtaatttcttccacttagtgagagttctttactcttgccctgtggtttt |
2817373 |
T |
|
| Q |
478 |
ttccccttatttcttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactct |
577 |
Q |
| |
|
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2817372 |
ttccc-ttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcttctcttattttagctgcgtgataatattttgttactct |
2817274 |
T |
|
| Q |
578 |
ggtacctaacagtggtatcagagcccttggttcgtagctgttattccgctgtgataaactagtggagtggtaagaaaaatcttagtat |
665 |
Q |
| |
|
|||||||||||||||||||| |||| |||||||||| ||||||||||| || |||||||||||| |||||||||||||||||||||| |
|
|
| T |
2817273 |
ggtacctaacagtggtatcaaagccgctggttcgtagttgttattccgcagtaataaactagtggtgtggtaagaaaaatcttagtat |
2817186 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 291 - 588
Target Start/End: Original strand, 54545902 - 54546200
Alignment:
| Q |
291 |
tagagtagtgagagaaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctagttcgtgttagt--ttgtattctcctatttataagagag |
388 |
Q |
| |
|
|||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||||| |
|
|
| T |
54545902 |
tagaatagtgagaggaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcctatttataagagag |
54546001 |
T |
|
| Q |
389 |
agtggtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttagtgaaagttctctactcttaccccgtggttttttccccttatt |
488 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
54546002 |
agtggtaattgtactctccttgtagttagagagaggtcctgtaatttcatccacttagtgaaagttctctactctagccccgtggttttttccccttatt |
54546101 |
T |
|
| Q |
489 |
tcttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaaca |
588 |
Q |
| |
|
| ||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
54546102 |
tgttgaggggtttccacgt-aaatattgtatgttcagttcctcttttctcatctcttattttagctgcgtgataatattttgttactctggtacctaaca |
54546200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 435 - 588
Target Start/End: Complemental strand, 24659287 - 24659136
Alignment:
| Q |
435 |
tcttccacttagtgaaagttctctactcttaccccgtggttttttccccttatttcttgaggggtttccacgtaaaatattgtgtgttcagttcctcttt |
534 |
Q |
| |
|
|||||||||||||||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
24659287 |
tcttccacttagtgaaagttct--actcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatgttgtgtgttcagttcctcttt |
24659190 |
T |
|
| Q |
535 |
tctcgtctcttattttagctgcgtgataatattttgttactctggtacctaaca |
588 |
Q |
| |
|
|||| |||||||||||||||| ||||||||||||| |||||||||||||||||| |
|
|
| T |
24659189 |
tctcatctcttattttagctgtgtgataatattttattactctggtacctaaca |
24659136 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 474 - 580
Target Start/End: Original strand, 4579254 - 4579360
Alignment:
| Q |
474 |
ttttttccccttatttcttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgtta |
573 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
4579254 |
ttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagttgcgtgataatattttgtta |
4579353 |
T |
|
| Q |
574 |
ctctggt |
580 |
Q |
| |
|
||||||| |
|
|
| T |
4579354 |
ctctggt |
4579360 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 402 - 574
Target Start/End: Complemental strand, 31204950 - 31204781
Alignment:
| Q |
402 |
ctctccttgtatttagagagaggtcctgtaatttcttccacttagtgaaagttctctactcttacc-ccgtggttttttccccttatttcttgaggggtt |
500 |
Q |
| |
|
|||||||| ||||||||||| || |||||||| | ||||||||||||||||||||||| || || ||||| |||||||| ||||||| |||||||||| |
|
|
| T |
31204950 |
ctctccttatatttagagag--gttttgtaatttttcccacttagtgaaagttctctactattgcctccgtgattttttcctcttatttgttgaggggtt |
31204853 |
T |
|
| Q |
501 |
tccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttac |
574 |
Q |
| |
|
||||||| |||||||||| |||||||||||||||| || |||||| ||||| ||||||| |||||||||||||| |
|
|
| T |
31204852 |
tccacgt-aaatattgtgagttcagttcctctttt-tcatctcttcttttaactgcgtgctaatattttgttac |
31204781 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 297 - 435
Target Start/End: Complemental strand, 24671301 - 24671173
Alignment:
| Q |
297 |
agtgagagaaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctagttcgtgttagtttgtattctcctatttataagagagagtggtaa |
396 |
Q |
| |
|
|||||||| |||||||||||||| ||| |||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||| ||||| |
|
|
| T |
24671301 |
agtgagaggaaaaatatagagaggaaatatagtttctcctgtgaggtttctcctagt--------gttagtattctcctattt-caagagagag-ggtaa |
24671212 |
T |
|
| Q |
397 |
ttgtactctccttgtatttagagagaggtcctgtaattt |
435 |
Q |
| |
|
|| ||||||||||||||||||||| ||| |||||||| |
|
|
| T |
24671211 |
tttgtctctccttgtatttagagagaagtcttgtaattt |
24671173 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 393 - 451
Target Start/End: Original strand, 35977103 - 35977161
Alignment:
| Q |
393 |
gtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttagtgaaa |
451 |
Q |
| |
|
|||||||| ||||||||||||||||||||| ||| |||||||| ||||||||||||||| |
|
|
| T |
35977103 |
gtaattgttctctccttgtatttagagagaagtcttgtaattttttccacttagtgaaa |
35977161 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 544 - 600
Target Start/End: Original strand, 25877086 - 25877142
Alignment:
| Q |
544 |
ttattttagctgcgtgataatattttgttactctggtacctaacagtggtatcagag |
600 |
Q |
| |
|
||||||||| ||||| |||||||| ||||| |||||||||||||||||||||||||| |
|
|
| T |
25877086 |
ttattttagttgcgtaataatattatgttattctggtacctaacagtggtatcagag |
25877142 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 297 - 422
Target Start/End: Original strand, 4579126 - 4579241
Alignment:
| Q |
297 |
agtgagagaaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctagttcgtgttagtttgtattctcctatttataagagagagtggtaa |
396 |
Q |
| |
|
|||||||| |||||||||||||| ||| ||||||||||||||||||||||| ||| |||| |||||||||||||| | ||||||| ||||| |
|
|
| T |
4579126 |
agtgagaggaaaaatatagagaggaaatatagtttctcctgtgaggtttctcatag--------agttagtattctcctattt-cacgagagag-ggtaa |
4579215 |
T |
|
| Q |
397 |
ttgtactctccttgtatttagagaga |
422 |
Q |
| |
|
|| ||||||||||||||||||||| |
|
|
| T |
4579216 |
tttgtctctccttgtatttagagaga |
4579241 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 369; Significance: 0; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 369; E-Value: 0
Query Start/End: Original strand, 249 - 665
Target Start/End: Complemental strand, 9444430 - 9444015
Alignment:
| Q |
249 |
catcccaaatcagtaacaacacaagaacaagtaaagcttgtttagagtagtgagagaaaaaatatagagagaaaaattagtttctcctgtgaggtttctc |
348 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||| |
|
|
| T |
9444430 |
catcccaaatcagtaacaacacaagaacaagtaaagcttgtttaga-tagtgagagaaaaaatatagagaggaaaaatagtttctcctgtgaggtttctc |
9444332 |
T |
|
| Q |
349 |
ctagttcgtgttagtttgtattctcctatttataagagagagtggtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttagtg |
448 |
Q |
| |
|
|||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
9444331 |
ctagtttgtgttagttagtattctcctatttataagagagagtggtatttgtactctccttgtagttagagagaggtcctgtaatttcttccacttagtg |
9444232 |
T |
|
| Q |
449 |
aaagttctctactcttaccccgtggttttttccccttatttcttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttatt |
548 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9444231 |
aaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttatt |
9444132 |
T |
|
| Q |
549 |
ttagctgcgtgataatattttgttactctggtacctaacagtggtatcagagcccttggttcgtagctgttattccgctgtgataaactagtggagtggt |
648 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9444131 |
ttagctgcgtgataatattttgttactctggtacctaacagtggtatcagagccgctggttcgtagctgttattccgctgtgataaactagtggagtggt |
9444032 |
T |
|
| Q |
649 |
aagaaaaatcttagtat |
665 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
9444031 |
aagaaaaatcttagtat |
9444015 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 300; E-Value: 1e-168
Query Start/End: Original strand, 249 - 588
Target Start/End: Complemental strand, 9439710 - 9439372
Alignment:
| Q |
249 |
catcccaaatcagtaacaacacaagaacaagtaaagcttgtttagagtagtgagagaaaaaatatagagagaaaaattagtttctcctgtgaggtttctc |
348 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||| |
|
|
| T |
9439710 |
catcccaaatcagtaacaacacaagaacaagtaaagcttgtttaga-tagtgagagaaaaaatatagagaggaaaaatagtttctcctgtgaggtttctc |
9439612 |
T |
|
| Q |
349 |
ctagttcgtgttagtttgtattctcctatttataagagagagtggtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttagtg |
448 |
Q |
| |
|
|||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
9439611 |
ctagtttgtgttagttagtattctcctatttataagagagagtggtatttgtactctccttgtagttagagagaggtcctgtaatttcttccacttagtg |
9439512 |
T |
|
| Q |
449 |
aaagttctctactcttaccccgtggttttttccccttatttcttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttatt |
548 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9439511 |
aaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttatt |
9439412 |
T |
|
| Q |
549 |
ttagctgcgtgataatattttgttactctggtacctaaca |
588 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9439411 |
ttagctgcgtgataatattttgttactctggtacctaaca |
9439372 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 515 - 571
Target Start/End: Original strand, 4799315 - 4799371
Alignment:
| Q |
515 |
tgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgt |
571 |
Q |
| |
|
|||||||||| || |||||||||| |||||||||||||| | ||||||||||||||| |
|
|
| T |
4799315 |
tgtgtgttcaatttctcttttctcatctcttattttagcagtgtgataatattttgt |
4799371 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 516 - 589
Target Start/End: Original strand, 4844870 - 4844943
Alignment:
| Q |
516 |
gtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaacag |
589 |
Q |
| |
|
||||||||| ||| |||| |||| |||||||||| | |||||||||| ||||||| |||| ||||||||||| |
|
|
| T |
4844870 |
gtgtgttcaattcttcttatctcaactcttatttttacagcgtgataatgttttgtttctcttgtacctaacag |
4844943 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 348; Significance: 0; HSPs: 10)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 348; E-Value: 0
Query Start/End: Original strand, 180 - 665
Target Start/End: Complemental strand, 27879134 - 27878632
Alignment:
| Q |
180 |
ataaatgaaaatggttgaggcatggcttttacggtcctataaatagcatgtcccttgcaccattctactcatcccaaatcagtaacaacacaagaacaa- |
278 |
Q |
| |
|
||||||| || |||||| ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
27879134 |
ataaatgcaattggttggggcatggctctttcactagtataaatagcatgtcccttgcaccattctactcatcccaaattagtaacaacaccagaacaaa |
27879035 |
T |
|
| Q |
279 |
gtaaagc---------ttgtt-----tagagtagtgagagaaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctagttcgtgttagt- |
363 |
Q |
| |
|
|||| | ||||| |||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |
|
|
| T |
27879034 |
gtaacacaacaactacttgttcttagtagaatagagagaggaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctaggtagtgttagtg |
27878935 |
T |
|
| Q |
364 |
-ttgtattctcctatttataagagagagtggtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttagtgaaagttctctactc |
462 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27878934 |
tttgtattctcctatttataagagagagtggtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttagtgaaagttctctactc |
27878835 |
T |
|
| Q |
463 |
ttaccccgtggttttttccccttatttcttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgata |
562 |
Q |
| |
|
|| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27878834 |
ttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgata |
27878735 |
T |
|
| Q |
563 |
atattttgttactctggtacctaacagtggtatcagagcccttggttcgtagctgttattccgctgtgataaactagtggagtggtaagaaaaatcttag |
662 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27878734 |
atattttgttactctggtacctaacagtggtatcagagcccctggttcgtagctgttattccgctgtgataaactagtggagtggtaagaaaaatcttag |
27878635 |
T |
|
| Q |
663 |
tat |
665 |
Q |
| |
|
||| |
|
|
| T |
27878634 |
tat |
27878632 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 248 - 588
Target Start/End: Complemental strand, 26976470 - 26976131
Alignment:
| Q |
248 |
tcatcccaaatcagtaacaacacaagaacaagtaaagcttgtttagagtagtgagagaaaaaatatagagagaaaaattagtttctcctgtgaggtttct |
347 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||| |
|
|
| T |
26976470 |
tcatcccaaatcagtaacaacacaagaacaagtaaagcttgtttaga-tagtgagagaaaaaatatagagaggaaaaatagtttctcctgtgaggtttct |
26976372 |
T |
|
| Q |
348 |
cctagttcgtgttagtttgtattctcctatttataagagagagtggtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttagt |
447 |
Q |
| |
|
||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
26976371 |
cctagtttgtgttagttagtattctcctatttataagagagagtggtaattgtactctccttgtagttagagagaggtcctgtaatttcttccacttagt |
26976272 |
T |
|
| Q |
448 |
gaaagttctctactcttaccccgtggttttttccccttatttcttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttat |
547 |
Q |
| |
|
||||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26976271 |
gaaagttctctactcttgccccttggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttat |
26976172 |
T |
|
| Q |
548 |
tttagctgcgtgataatattttgttactctggtacctaaca |
588 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26976171 |
tttagctgcgtgataatattttgttactctggtacctaaca |
26976131 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 300; E-Value: 1e-168
Query Start/End: Original strand, 249 - 588
Target Start/End: Original strand, 1234680 - 1235018
Alignment:
| Q |
249 |
catcccaaatcagtaacaacacaagaacaagtaaagcttgtttagagtagtgagagaaaaaatatagagagaaaaattagtttctcctgtgaggtttctc |
348 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||| |
|
|
| T |
1234680 |
catcccaaatcagtaacaacacaagaacaagtaaagcttgtttaga-tagtgagagaaaaaatatagagaggaaaaatagtttctcctgtgaggtttctc |
1234778 |
T |
|
| Q |
349 |
ctagttcgtgttagtttgtattctcctatttataagagagagtggtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttagtg |
448 |
Q |
| |
|
|||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
1234779 |
ctagtttgtgttagttagtattctcctatttataagagagagtggtatttgtactctccttgtagttagagagaggtcctgtaatttcttccacttagtg |
1234878 |
T |
|
| Q |
449 |
aaagttctctactcttaccccgtggttttttccccttatttcttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttatt |
548 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1234879 |
aaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttatt |
1234978 |
T |
|
| Q |
549 |
ttagctgcgtgataatattttgttactctggtacctaaca |
588 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1234979 |
ttagctgcgtgataatattttgttactctggtacctaaca |
1235018 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 295; E-Value: 1e-165
Query Start/End: Original strand, 250 - 588
Target Start/End: Complemental strand, 27874327 - 27873990
Alignment:
| Q |
250 |
atcccaaatcagtaacaacacaagaacaagtaaagcttgtttagagtagtgagagaaaaaatatagagagaaaaattagtttctcctgtgaggtttctcc |
349 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||| |||||||||||||||||||| |
|
|
| T |
27874327 |
atcccaaatcagtaacaacacaagaacaagtaaagcttgtttaga-tagtgagagaaaaaatatagagaggaaaaatagcttctcctgtgaggtttctcc |
27874229 |
T |
|
| Q |
350 |
tagttcgtgttagtttgtattctcctatttataagagagagtggtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttagtga |
449 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27874228 |
tagtttgtgttagtttgtattctcctatttataagagagagtggtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttagtga |
27874129 |
T |
|
| Q |
450 |
aagttctctactcttaccccgtggttttttccccttatttcttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattt |
549 |
Q |
| |
|
||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
27874128 |
aagttctctactcttgccccgtggttttttccctttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcttctcttattt |
27874029 |
T |
|
| Q |
550 |
tagctgcgtgataatattttgttactctggtacctaaca |
588 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
27874028 |
tagatgcgtgataatattttgttactctggtacctaaca |
27873990 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 160; E-Value: 6e-85
Query Start/End: Original strand, 297 - 588
Target Start/End: Original strand, 18967912 - 18968194
Alignment:
| Q |
297 |
agtgagagaaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctagttcgtgttagtttgtattctcctatttataagagagagtggtaa |
396 |
Q |
| |
|
|||||||| ||||||||| |||| ||| ||||||||| |||||||||||||||||| ||| |||||||||||||| | ||||||| | ||| |
|
|
| T |
18967912 |
agtgagaggaaaaatataaagaggaaatatagtttctcttgtgaggtttctcctagt--------gttagtattctcctatttc-atgagagag-gctaa |
18968001 |
T |
|
| Q |
397 |
ttgtactctccttgtatttagagagaggtcctgtaatt-tcttccacttagtgaaagttctctactcttaccccgtggttttttccccttatttcttgag |
495 |
Q |
| |
|
|| ||||||||||||||||||||| ||| ||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||| |
|
|
| T |
18968002 |
tttgtctctccttgtatttagagagaagtcttgtaattgtcttccacttagtgaaagttttctactcttgccccgtggttttttccccttatttgttgag |
18968101 |
T |
|
| Q |
496 |
gggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaaca |
588 |
Q |
| |
|
|||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18968102 |
gggtttccacgtaaaatattatgtattcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaaca |
18968194 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 313 - 589
Target Start/End: Original strand, 30986552 - 30986830
Alignment:
| Q |
313 |
tagagagaaa-aattagtttctcctg-tgaggtttctcctagttcgtgttagtttgtattctcctatttataagagagagtggtaattgtactctccttg |
410 |
Q |
| |
|
|||||||||| || ||||||||||| ||||||||||||||| | |||| ||| ||||| ||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
30986552 |
tagagagaaagaaatagtttctcctcatgaggtttctcctaggtagtgtcagt----attcttctatttacaagagagagtggtaattgtactctccttg |
30986647 |
T |
|
| Q |
411 |
tatttagagagaggtcctgtaatttcttccacttagtgaaagttctctactcttaccccgtgg--ttttttccccttatttcttgagggg---tttccac |
505 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||| |||||||| ||||||| |
|
|
| T |
30986648 |
catttagagagaggtcctgcaatttcttccacttagtgaaagttctctactcttgccccgtggttttttttttccttatttgttgaggggtactttccac |
30986747 |
T |
|
| Q |
506 |
gtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaacag |
589 |
Q |
| |
|
|| |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |
|
|
| T |
30986748 |
gt-aaatattgtgcgttcagttcctcttttctcgtctcttattttagctacgtgataatattttgttactctgatacctaacag |
30986830 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 300 - 542
Target Start/End: Original strand, 30966683 - 30966923
Alignment:
| Q |
300 |
gagagaaaaaatatagagagaaa-aattagtttctcct-gtgaggtttctcctagttcgtgttagtttgtattctcctatttataagagagagtggtaat |
397 |
Q |
| |
|
||||||||||||||||||||||| || |||||||| || |||||||||||||||| | | | ||| ||||| ||||||| |||||||||||||||| |
|
|
| T |
30966683 |
gagagaaaaaatatagagagaaagaaatagtttctacttgtgaggtttctcctaggtagcctcagt----attcttctatttacaagagagagtggtaat |
30966778 |
T |
|
| Q |
398 |
tgtactctccttgtatttagagagaggtcctgtaatttcttccacttagtgaaagttctctactcttaccccgtggtttt-ttccccttatttcttgagg |
496 |
Q |
| |
|
||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||| |||| || ||||||||| |||| | |
|
|
| T |
30966779 |
tgtactctccttgcatttagagagaggttctgcaatttcttccacttagtgaaagttctctactcttgccccgtgattttatttcccttatttgttgatg |
30966878 |
T |
|
| Q |
497 |
ggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtct |
542 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
30966879 |
ggtttccacgt-aaatattgtgtgttcagttcctcttttctcgtct |
30966923 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 537 - 665
Target Start/End: Original strand, 30967674 - 30967802
Alignment:
| Q |
537 |
tcgtctcttattttagctgcgtgataatattttgttactctggtacctaacagtggtatcagagcccttggttcgtagctgttattccgctgtgataaac |
636 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||||| |
|
|
| T |
30967674 |
tcgtctcttattttagctgcttgataatattttgttactctggtacctaacagtggtatcagagcctttagttcgtagctgttattccgctgcgataaac |
30967773 |
T |
|
| Q |
637 |
tagtggagtggtaagaaaaatcttagtat |
665 |
Q |
| |
|
|||||| |||||||||||||||||||||| |
|
|
| T |
30967774 |
tagtggtgtggtaagaaaaatcttagtat |
30967802 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 397 - 583
Target Start/End: Original strand, 21966677 - 21966860
Alignment:
| Q |
397 |
ttgtactctccttgtatttagagagaggtcctgtaatttcttccacttagtgaaagttctctactcttaccccgtggttttttccccttatttcttgagg |
496 |
Q |
| |
|
|||||||||| ||| | ||||||||||||| | |||||||||||| |||||||||||||||||||||| |||| | | |||||||| |||||| |||||| |
|
|
| T |
21966677 |
ttgtactctctttgaaattagagagaggtcttataatttcttccatttagtgaaagttctctactcttgccccat-gatttttccctttatttattgagg |
21966775 |
T |
|
| Q |
497 |
ggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacc |
583 |
Q |
| |
|
||||||||| | ||||||| | |||| ||||||||||||||| | | ||| ||||||||||||||||| ||| |||||| ||||||| |
|
|
| T |
21966776 |
ggtttccacat-aaatattttatgtttagttcctcttttctcatatgtta-tttagctgcgtgataatgtttcgttactttggtacc |
21966860 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 420 - 665
Target Start/End: Complemental strand, 23012667 - 23012423
Alignment:
| Q |
420 |
agaggtcctgtaatttcttccacttagtgaaagttctctactcttaccccgtggttttttccccttatttcttgaggggtttccacgtaaaatattgtgt |
519 |
Q |
| |
|
||||||| || ||||||| ||||||||||||||||||||||||| ||| |||||||| ||||||| || ||| | ||||||||||||| || ||||| |
|
|
| T |
23012667 |
agaggtcttgaaatttctctcacttagtgaaagttctctactcttgccca-tggttttt-ccccttaatttgtgacgagtttccacgtaaa-taatgtgt |
23012571 |
T |
|
| Q |
520 |
gttcagttcctctttt-ctcgtctcttattttagctgcgtgataata-ttttgttactctggtacctaacagtggtatcagagcccttggttcgtagctg |
617 |
Q |
| |
|
||||| ||| |||||| ||||||||||||||||| |||||||||||| |||| ||||| || |||| |||| || || ||||| |||| |||||| || |
|
|
| T |
23012570 |
gttcaattcttctttttctcgtctcttattttagttgcgtgataatattttttttactttgttacccaacaatgtcatttgagccattggctcgtagttg |
23012471 |
T |
|
| Q |
618 |
ttattccgctgtgataaactagtggagtggtaagaaaaatcttagtat |
665 |
Q |
| |
|
|| |||| | | |||| |||| |||||||||||||| |||||||| |
|
|
| T |
23012470 |
ttgttccacatcaacaaacaagtgcagtggtaagaaaaaacttagtat |
23012423 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 324; Significance: 0; HSPs: 14)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 324; E-Value: 0
Query Start/End: Original strand, 180 - 579
Target Start/End: Complemental strand, 5199062 - 5198664
Alignment:
| Q |
180 |
ataaatgaaaatggttgaggcatggcttttacggtcctataaatagcatgtcccttgcaccattctactcatcccaaatcagtaacaacacaagaacaag |
279 |
Q |
| |
|
||||||| || |||||| ||||||||| || | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5199062 |
ataaatgcaattggttggggcatggctctttcactagtataaatagcatgtcccttgcaccattctactcatcccaaatcagtaacaacacaagaacaag |
5198963 |
T |
|
| Q |
280 |
taaagcttgtttagagtagtgagagaaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctagttcgtgttagtttgtattctcctattt |
379 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||||| |
|
|
| T |
5198962 |
taaagcttgtttaga-tagtgagagaaaaaatatagagaggaaaaatagtttctcctgtgaggtttctcctagtttgtgttagttagtattctcctattt |
5198864 |
T |
|
| Q |
380 |
ataagagagagtggtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttagtgaaagttctctactcttaccccgtggtttttt |
479 |
Q |
| |
|
|||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
5198863 |
ataagagagagtggtatttgtactctccttgtagttagagagaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggtttttt |
5198764 |
T |
|
| Q |
480 |
ccccttatttcttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctgg |
579 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5198763 |
ccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctgg |
5198664 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 299 - 665
Target Start/End: Original strand, 15602905 - 15603271
Alignment:
| Q |
299 |
tgagagaaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctagttcgtgttagtttgtattctcctatttataagagagagtggtaatt |
398 |
Q |
| |
|
|||||| ||||||||||| ||||||||||| || | || ||||||||||| |||| ||||||||| ||||||||||||||| |||| ||| |||||||| |
|
|
| T |
15602905 |
tgagaggaaaaatatagaaagaaaaattagatttttctatgaggtttctcttagtaagtgttagttagtattctcctatttacaagatagaatggtaatt |
15603004 |
T |
|
| Q |
399 |
gtactctccttgtatttagagagaggtcctgtaatttcttccacttagtgaaagttctctactcttaccccgtggttttttccccttatttcttgagggg |
498 |
Q |
| |
|
|||| |||| || ||||||||||||||| |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| |
|
|
| T |
15603005 |
gtacactccatgcatttagagagaggtcttgtaatttcttctacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgagggg |
15603104 |
T |
|
| Q |
499 |
tttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaacagtggtatcag |
598 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| ||||||| ||| ||||||| |||||| |
|
|
| T |
15603105 |
tttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttatttcaattgcgtgataatattttcttactctcacacccaacagtgctatcag |
15603204 |
T |
|
| Q |
599 |
agcccttggttcgtagctgttattccgctgtgataaactagtggagtggtaagaaaaatcttagtat |
665 |
Q |
| |
|
|| | |||||||||| |||||||||| || | ||||| |||||||||||||||| |||||||||| |
|
|
| T |
15603205 |
agtcattggttcgtaattgttattccgatgcaaaaaactggtggagtggtaagaaatatcttagtat |
15603271 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 425 - 665
Target Start/End: Original strand, 825632 - 825873
Alignment:
| Q |
425 |
tcctgtaatttcttccacttagtgaaagttctctactcttaccccgtggtttt-ttccccttatttcttgaggggtttccacgtaaaatattgtgtgttc |
523 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||| |
|
|
| T |
825632 |
tcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggtttttttccccttatttgttgagtggtttccacgtaaaatattgtgtgttc |
825731 |
T |
|
| Q |
524 |
agttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaacagtggtatcagagcccttggttcgtagctgttattc |
623 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
825732 |
agttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaacagtggtatcagagccgctggttcgtagctgttattc |
825831 |
T |
|
| Q |
624 |
cgctgtgataaactagtggagtggtaagaaaaatcttagtat |
665 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
825832 |
cgctgtgataaactagtgaagtggtaagaaaaatcttagtat |
825873 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 425 - 588
Target Start/End: Original strand, 830288 - 830452
Alignment:
| Q |
425 |
tcctgtaatttcttccacttagtgaaagttctctactcttaccccgtggtttt-ttccccttatttcttgaggggtttccacgtaaaatattgtgtgttc |
523 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
830288 |
tcctgtaatttcttccacttagtgaaagttctccactcttgccccgtggtttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttc |
830387 |
T |
|
| Q |
524 |
agttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaaca |
588 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
830388 |
agttcctcttttctcgtctcttattttaactgcgtgataatattttgttactctggtacctaaca |
830452 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 321 - 581
Target Start/End: Original strand, 28715816 - 28716070
Alignment:
| Q |
321 |
aaaattagtttctcctgtgaggtttctcctagttcgtgttagtttgtattctcctatttataagagagagtggtaattgtactctccttgtatttagaga |
420 |
Q |
| |
|
|||| ||||||||| ||| ||||||||||||| | |||||||| ||||||||||||||| || | ||||||||||||||||||||| ||||||||| |
|
|
| T |
28715816 |
aaaaatagtttctcttgtaaggtttctcctaggtagtgttagt----attctcctatttataggaaacggtggtaattgtactctccttgcatttagaga |
28715911 |
T |
|
| Q |
421 |
gaggtcctgtaatttcttccacttagtgaaagttctctactcttaccccgtggttttttccccttatttcttgaggggtttccacgtaaaatattgtgtg |
520 |
Q |
| |
|
|| ||||||||||||||||||||| |||||||||||||| |||| | |||| ||||||||||||||| |||||||||||||||| |||||||||||| |
|
|
| T |
28715912 |
gatgtcctgtaatttcttccactttgtgaaagttctctattcttctcttgtgg-tttttccccttatttaatgaggggtttccacgt-aaatattgtgtg |
28716009 |
T |
|
| Q |
521 |
ttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggta |
581 |
Q |
| |
|
|||| |||||||||| ||||||||||||||| || ||||||||||||||||||||||||| |
|
|
| T |
28716010 |
ttcaattcctcttttgtcgtctcttattttaaatgtgtgataatattttgttactctggta |
28716070 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 297 - 579
Target Start/End: Complemental strand, 30397191 - 30396920
Alignment:
| Q |
297 |
agtgagagaaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctagttcgtgttagtttgtattctcctatttataagagagagtggtaa |
396 |
Q |
| |
|
|||||||| || ||||||||||| ||| |||||||||||||||| ||||||||||| ||| ||||||||||||| || | |||| ||||| |
|
|
| T |
30397191 |
agtgagaggaacaatatagagaggaaatatagtttctcctgtgagatttctcctagt--------gttaatattctcctatttc-aacatagag-ggtaa |
30397102 |
T |
|
| Q |
397 |
ttgtactctccttgtatttagagagaggtcctgtaatttcttccacttagtgaaa-gttctctactcttaccccgtggttttttccccttatttcttgag |
495 |
Q |
| |
|
|| |||||||||||| |||| ||||||| |||||||||||||||||||||||| |||||||||||| ||| ||| |||||| ||||||||| ||||| |
|
|
| T |
30397101 |
tttgtctctccttgtatatagaaagaggtcttgtaatttcttccacttagtgaaaagttctctactctcgccctgtgatttttttcccttatttgttgag |
30397002 |
T |
|
| Q |
496 |
gggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctgg |
579 |
Q |
| |
|
||||||| ||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
30397001 |
gggtttcaacg-aaaatat-gtgtgttcagttcgtcttttctcgtctcttattttagctgcgtgataatattttgctactctgg |
30396920 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 368 - 665
Target Start/End: Complemental strand, 13844014 - 13843720
Alignment:
| Q |
368 |
attctcctatttataagagagagtggtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttagtgaaagttctctactcttacc |
467 |
Q |
| |
|
|||||||||||| ||| | |||||||||||| || ||| |||||||||| | || ||||||||||||||||||||||| ||||| |||| |||| ||| | |
|
|
| T |
13844014 |
attctcctatttttaaaatagagtggtaattttattcttcttgtatttataaaggggtcctgtaatttcttccacttaatgaaaattctatacttttaac |
13843915 |
T |
|
| Q |
468 |
ccgtggttttttccccttatttcttgaggggtttccacgtaaaatattgtgtgttca-gttcctcttttctcgtctcttattttagctgcgtgataatat |
566 |
Q |
| |
|
| | |||||| |||||||| ||||||||||||||||| |||||| |||||||| || || ||||||| |||| |||| | ||||||||||| |
|
|
| T |
13843914 |
ctat-aatttttctccttatttgttgaggggtttccacgt-aaatat--tgtgttcatttttcttttttctcaaaacttactttacttacgtgataatat |
13843819 |
T |
|
| Q |
567 |
tttgttactctggtacctaacagtggtatcagagcccttggttcgtagctgttattccgctgtgataaactagtggagtggtaagaaaaatcttagtat |
665 |
Q |
| |
|
||| |||||||| || | | |||||||| |||||| |||| |||| ||| ||||||||| ||||| ||||||||||||||||||| ||||||| |
|
|
| T |
13843818 |
tttattactctgatagccacaagtggtattagagccattggctcgtgatagttgttccgctgtagcaaactggtggagtggtaagaaaaatattagtat |
13843720 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 428 - 588
Target Start/End: Complemental strand, 31593068 - 31592910
Alignment:
| Q |
428 |
tgtaatttcttccacttagtgaaagttctctactcttaccccgtggttttttccccttatttcttgaggggtttccacgtaaaatattgtgtgttcagtt |
527 |
Q |
| |
|
||||||||||| | ||||||||||||||||||||||| | |||||||||| | |||||| ||||| | |||||||||||| |||||| |||| ||| |
|
|
| T |
31593068 |
tgtaatttctttcggttagtgaaagttctctactcttatct-gtggttttttttc-ttatttattgagagatttccacgtaaattattgtatgttatgtt |
31592971 |
T |
|
| Q |
528 |
cctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaaca |
588 |
Q |
| |
|
||||||||||||||||||||| || ||| ||||||||||| ||||||| || |||| |||| |
|
|
| T |
31592970 |
cctcttttctcgtctcttattctatctgtgtgataatattatgttactttgatacccaaca |
31592910 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 291 - 375
Target Start/End: Original strand, 830205 - 830291
Alignment:
| Q |
291 |
tagagtagtgagagaaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctagttcgtgtta--gtttgtattctcct |
375 |
Q |
| |
|
|||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||| |||||||||||||| |
|
|
| T |
830205 |
tagaatagtgagaggaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcct |
830291 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 291 - 375
Target Start/End: Original strand, 825549 - 825635
Alignment:
| Q |
291 |
tagagtagtgagagaaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctagttcgtgtta--gtttgtattctcct |
375 |
Q |
| |
|
|||| ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| | |||||| |||||||||||||| |
|
|
| T |
825549 |
tagaatagtgagaggaaaaatatagagagaaaaattagtttctcctgcgaggtttctcctaggtagtgttagtgtttgtattctcct |
825635 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 366 - 478
Target Start/End: Original strand, 8004167 - 8004278
Alignment:
| Q |
366 |
gtattctcctatttataagagagagtggtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttagtgaaagttctctactctta |
465 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||| ||| ||||| |||||||| | |||||||||||| | |||||||||| |||| || || |
|
|
| T |
8004167 |
gtattctcctatttataagagagagtg-taattgtactcttcttacatttaaagagaggttttataatttcttccattcagtgaaagttttctagtcata |
8004265 |
T |
|
| Q |
466 |
ccccgtggttttt |
478 |
Q |
| |
|
|||||| |||||| |
|
|
| T |
8004266 |
ccccgttgttttt |
8004278 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 366 - 588
Target Start/End: Complemental strand, 13840456 - 13840240
Alignment:
| Q |
366 |
gtattctcctatttataagagagagtggtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttagtgaaagttctctactctta |
465 |
Q |
| |
|
||||||| ||||| ||||||||| | ||||||||||||||||| ||||||||||||||| |||||||| || |||| || ||| || ||||||||| |
|
|
| T |
13840456 |
gtattcttttatttttaagagagaattgtaattgtactctccttatatttagagagaggttttgtaattt-ttttacttggtaaaaattttctactcttg |
13840358 |
T |
|
| Q |
466 |
ccccgtggttttttccccttatttcttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataata |
565 |
Q |
| |
|
| || || |||| |||||| ||| |||||| || || || |||||| ||||||| ||||||| |||||| ||| ||||| || | |||||||||| |
|
|
| T |
13840357 |
ctccatg--ttttcccccttgtttgttgaggaattctcatgt-aaatat--tgtgttcggttcctcctttctcatcttttattataattacgtgataata |
13840263 |
T |
|
| Q |
566 |
ttttgttactctggtacctaaca |
588 |
Q |
| |
|
|||||||| ||||||||| |||| |
|
|
| T |
13840262 |
ttttgttattctggtacccaaca |
13840240 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 475 - 568
Target Start/End: Complemental strand, 12175860 - 12175768
Alignment:
| Q |
475 |
tttttccccttatttcttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataatattt |
568 |
Q |
| |
|
||||| || |||||| ||||| |||||||| ||||||||||||||||| || || |||| || ||| ||||||||| ||||||||||||||| |
|
|
| T |
12175860 |
ttttttccattatttattgagatgtttccaca-aaaatattgtgtgttcaatttcttttttatcatcttttattttagttgcgtgataatattt |
12175768 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 524 - 573
Target Start/End: Complemental strand, 9358207 - 9358158
Alignment:
| Q |
524 |
agttcctcttttctcgtctcttattttagctgcgtgataatattttgtta |
573 |
Q |
| |
|
||||| ||||||||||||| || |||||||||||| ||||||||| |||| |
|
|
| T |
9358207 |
agttcttcttttctcgtctgttgttttagctgcgtaataatatttggtta |
9358158 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 187; Significance: 1e-101; HSPs: 7)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 297 - 583
Target Start/End: Complemental strand, 16183913 - 16183636
Alignment:
| Q |
297 |
agtgagagaaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctagttcgtgttagtttgtattctcctatttataagagagagtggtaa |
396 |
Q |
| |
|
|||||||| |||||||||||||| ||| |||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||| ||||| |
|
|
| T |
16183913 |
agtgagaggaaaaatatagagaggaaatatagtttctcctgtgaggtttctcctagt--------gttagtattctcctatttc-aagagagag-ggtaa |
16183824 |
T |
|
| Q |
397 |
ttgtactctccttgtatttagagagaggtcctgtaatt-tcttccacttagtgaaagttctctactcttaccccgtggttttttccccttatttcttgag |
495 |
Q |
| |
|
|| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| |
|
|
| T |
16183823 |
tttgtctctccttgtatttagagagaggtcttgtaattgtcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgag |
16183724 |
T |
|
| Q |
496 |
gggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacc |
583 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16183723 |
gggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacc |
16183636 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 291 - 588
Target Start/End: Original strand, 30235038 - 30235339
Alignment:
| Q |
291 |
tagagtagtgagagaaaaaatatagagagaaaaattagtttctcctg-tgaggtttctcctagttcgtgttagt--ttgtattctcctatttataagaga |
387 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| || | |||||||| |||||||||||||||||||||||| |
|
|
| T |
30235038 |
tagagtagtgagaggaaaaatatagagagaaaaattagtttctccttatgaggtttctcttacgtagtgttagtgtttgtattctcctatttataagaga |
30235137 |
T |
|
| Q |
388 |
gagtggtaattgtactctccttgtatttag-agagaggtcctgtaatttcttccacttagtgaaagttctctactcttaccccgtggtttttt-cccctt |
485 |
Q |
| |
|
|||||||||||||||||||||| || ||| |||||||||||||||||||||| | ||| |||||||| |||||||||| ||||||||||||| |||||| |
|
|
| T |
30235138 |
gagtggtaattgtactctccttataaataggagagaggtcctgtaatttcttctagttattgaaagttttctactcttatcccgtggtttttttcccctt |
30235237 |
T |
|
| Q |
486 |
atttcttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtaccta |
585 |
Q |
| |
|
||| |||||||||||||||||||| ||||||||||||||||||||||||||| | | |||||||||||| || ||||||||||| |||||||||||| | |
|
|
| T |
30235238 |
attcgttgaggggtttccacgtaaa-tattgtgtgttcagttcctcttttctcattttttattttagctgtgtaataatattttgctactctggtaccca |
30235336 |
T |
|
| Q |
586 |
aca |
588 |
Q |
| |
|
||| |
|
|
| T |
30235337 |
aca |
30235339 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 366 - 612
Target Start/End: Complemental strand, 8140183 - 8139940
Alignment:
| Q |
366 |
gtattctcctatttataagagagagtggtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttagtgaaagttctctactctta |
465 |
Q |
| |
|
|||||||||||||| ||||||||| ||||||| ||||||||||||| ||||||||||| | |||||||||||||| |||||||||| |||| ||||| |
|
|
| T |
8140183 |
gtattctcctatttc-aagagagag-ggtaatttgtctctccttgtattaagagagaggtcttataatttcttccactgagtgaaagttttctaatctta |
8140086 |
T |
|
| Q |
466 |
ccccgtggttttttccccttatttcttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataata |
565 |
Q |
| |
|
|||| ||||||| ||||||||||| ||||||||||||||| |||| ||||||| |||||||| |||||||||| |||||||||||||||| ||||||||| |
|
|
| T |
8140085 |
ccccatggttttctccccttatttgttgaggggtttccacataaa-tattgtgcgttcagtttctcttttctcatctcttattttagctgtgtgataata |
8139987 |
T |
|
| Q |
566 |
ttttgttactctggtacctaacagtggtatcagagcccttggttcgt |
612 |
Q |
| |
|
|||||||||||||||||| ||||||||||| |||||| ||||||||| |
|
|
| T |
8139986 |
ttttgttactctggtacccaacagtggtattagagccattggttcgt |
8139940 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 402 - 665
Target Start/End: Complemental strand, 8138645 - 8138387
Alignment:
| Q |
402 |
ctctccttgtatttagagagaggtcctgtaatttcttccacttagtgaaagttctctactcttaccccgtggttttttccccttatttcttgaggggttt |
501 |
Q |
| |
|
|||||||||||||||||| |||||| |||||||||||||| ||||||||||||||||| |||| || ||||||||| ||||||| ||| || |||||||| |
|
|
| T |
8138645 |
ctctccttgtatttagagggaggtcttgtaatttcttccatttagtgaaagttctctaatcttgcctcgtggttttctccccttgtttgttaaggggttt |
8138546 |
T |
|
| Q |
502 |
ccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaacagtggtatcagagc |
601 |
Q |
| |
|
|||| | || || |||||||| |||| |||||||||||||||||||||||||||||||||||| |||| ||||||| |||| ||||||||||| ||||| |
|
|
| T |
8138545 |
ccacat-aattactgtgtgttaagtttttcttttctcgtctcttattttagctgcgtgataatactttgatactctgctacccaacagtggtattagagc |
8138447 |
T |
|
| Q |
602 |
ccttggttcgtagctgttattccgctgtgataaactagtggagtggtaagaaaaatcttagtat |
665 |
Q |
| |
|
| ||||||||| | ||||||| || | |||| || |||||||||||||||||||||||| |
|
|
| T |
8138446 |
cattggttcgttgtcgttattctgccg----caactggtcgagtggtaagaaaaatcttagtat |
8138387 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 585 - 665
Target Start/End: Original strand, 25441073 - 25441153
Alignment:
| Q |
585 |
aacagtggtatcagagcccttggttcgtagctgttattccgctgtgataaactagtggagtggtaagaaaaatcttagtat |
665 |
Q |
| |
|
|||||||||||||||||| ||| || |||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25441073 |
aacagtggtatcagagccattgatttgtagttgttattccgctgtgataaactagtggagtggtaagaaaaatcttagtat |
25441153 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 493 - 588
Target Start/End: Complemental strand, 36528509 - 36528415
Alignment:
| Q |
493 |
gaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaaca |
588 |
Q |
| |
|
|||||||||||||||||| ||||||||||||| ||||||| ||||| ||||||||||||| ||||| || || |||||||||||| |||| |||| |
|
|
| T |
36528509 |
gaggggtttccacgtaaa-tattgtgtgttcaattcctctattctcatctcttattttagttgcgtaattttactttgttactctgatacccaaca |
36528415 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 430 - 575
Target Start/End: Complemental strand, 5102749 - 5102606
Alignment:
| Q |
430 |
taatttcttccacttagtgaaagttctctactcttaccccgtggttttttccccttatttcttgaggggtttccacgtaaaatattgtgtgttcagttcc |
529 |
Q |
| |
|
|||||||| ||||||||| |||||| ||||||||| | || |||||||| |||||||||| ||||||| |||| | ||||| |||| ||| || ||| || |
|
|
| T |
5102749 |
taatttctcccacttagtaaaagttatctactcttgctccatggttttt-ccccttatttgttgagggttttc-atgtaaa-tattatgtatttagtccc |
5102653 |
T |
|
| Q |
530 |
tctttt-ctcgtctcttattttagctgcgtgataatattttgttact |
575 |
Q |
| |
|
|||||| ||| ||| ||||||||| || ||||||||||||||||||| |
|
|
| T |
5102652 |
tctttttctcatcttttattttagttgagtgataatattttgttact |
5102606 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0074 (Bit Score: 172; Significance: 4e-92; HSPs: 1)
Name: scaffold0074
Description:
Target: scaffold0074; HSP #1
Raw Score: 172; E-Value: 4e-92
Query Start/End: Original strand, 297 - 588
Target Start/End: Complemental strand, 27508 - 27226
Alignment:
| Q |
297 |
agtgagagaaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctagttcgtgttagtttgtattctcctatttataagagagagtggtaa |
396 |
Q |
| |
|
|||||||| |||||||||||||| ||| |||||||||||||||||||||||||||| ||| |||||| ||||||| |||||||| |||||| |
|
|
| T |
27508 |
agtgagaggaaaaatatagagaggaaatatagtttctcctgtgaggtttctcctagt--------gttagtattcacctatttc-aagagaga-tggtaa |
27419 |
T |
|
| Q |
397 |
ttgtactctccttgtatttagagagaggtcctgtaatt-tcttccacttagtgaaagttctctactcttaccccgtggttttttccccttatttcttgag |
495 |
Q |
| |
|
|| ||||||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| |
|
|
| T |
27418 |
tttgtctctccttgtatttagagagaagtattgtaattgtcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgag |
27319 |
T |
|
| Q |
496 |
gggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaaca |
588 |
Q |
| |
|
||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27318 |
gggtttccacgtaaagtattgtgtgttcagtttctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaaca |
27226 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 161; Significance: 2e-85; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 297 - 588
Target Start/End: Original strand, 46191266 - 46191546
Alignment:
| Q |
297 |
agtgagagaaaaaatatagagagaaaaattagtttctcctgtgaggtttctcctagttcgtgttagtttgtattctcctatttataagagagagtggtaa |
396 |
Q |
| |
|
|||||||| |||||||||||||| ||| |||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||| ||||| |
|
|
| T |
46191266 |
agtgagaggaaaaatatagagaggaaatatagtttctcctgtgaggtttctcctagt--------gttagtattctcctatttc-aagagagag-ggtaa |
46191355 |
T |
|
| Q |
397 |
ttgtactctccttgtatttagagagaggtcctgtaatt-tcttccacttagtgaaagttctctactcttaccccgtggttttttccccttatttcttgag |
495 |
Q |
| |
|
|| |||||||| |||||||||||| ||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |
|
|
| T |
46191356 |
tttgtctctccttctatttagagagaagtcttgtaattgtcttccacttagtgaaagttctctactcttgtcccgtggttttttccccttatttgttgag |
46191455 |
T |
|
| Q |
496 |
gggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaaca |
588 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |
|
|
| T |
46191456 |
gggtttccacgtaaaatat--tgtgttcagttcctcttttctcgtctcttattttagctgcatgataatattttgttactctggttcctaaca |
46191546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 402 - 583
Target Start/End: Complemental strand, 30697300 - 30697120
Alignment:
| Q |
402 |
ctctccttgtatttagagagaggtcctgtaatttcttccacttagtgaaagttctctactcttaccccgtggttttttccccttatttcttgaggggttt |
501 |
Q |
| |
|
||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||| ||||||||||| |
|
|
| T |
30697300 |
ctctccttgtatttagaaagaggtcttgtaatttcttccacttagtgaaagttctctactcttgccacgtggctttttccccttatttgttgaggggttt |
30697201 |
T |
|
| Q |
502 |
ccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacc |
583 |
Q |
| |
|
|||||| ||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |
|
|
| T |
30697200 |
ccacgt-aaatattttgtgttaagttcctcttttctcgtctcttatgttagctgcgtgataatattttgttactctagtacc |
30697120 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 402 - 588
Target Start/End: Original strand, 4130215 - 4130401
Alignment:
| Q |
402 |
ctctccttgtatttagagagaggtcctgtaatt-tcttccacttagtgaaagttctctactcttaccccgtggttttttccccttatttcttgaggggtt |
500 |
Q |
| |
|
||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||| || |
|
|
| T |
4130215 |
ctctccttgtatttagagagaagtcttgtaattatcttccacttagtgaaagttctctactcttgccccgtggttttttccctttatttgttgagggatt |
4130314 |
T |
|
| Q |
501 |
tccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaaca |
588 |
Q |
| |
|
||||||| |||| |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||| |
|
|
| T |
4130315 |
tccacgt-aaattttgtgtgttcagttcctcttttctcgtcacttattttagttgcgtgataatattttgttactcaagtacctaaca |
4130401 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 366 - 446
Target Start/End: Complemental strand, 30674865 - 30674787
Alignment:
| Q |
366 |
gtattctcctatttataagagagagtggtaattgtactctccttgtatttagagagaggtcctgtaatttcttccacttag |
446 |
Q |
| |
|
||||||||||||| | |||||||| || ||||||| |||||||| | ||||| ||||||| | ||||||||||||||||| |
|
|
| T |
30674865 |
gtattctcctatt-acaagagagaatg-taattgttctctccttatttttagtgagaggttgtataatttcttccacttag |
30674787 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University