View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2226R-Insertion-8 (Length: 572)
Name: NF2226R-Insertion-8
Description: NF2226R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2226R-Insertion-8 |
 | |
|
| [»] chr3 (31 HSPs) |
| |
|
Alignment Details
Target: chr3 (Bit Score: 505; Significance: 0; HSPs: 31)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 505; E-Value: 0
Query Start/End: Original strand, 8 - 572
Target Start/End: Complemental strand, 22458521 - 22457957
Alignment:
| Q |
8 |
aatcttcttttgttgaagtgtatgaaatgaaaggtttggctgaacaacaatctttggagttgttcaataagaagacattccacgacttaaacggacgttg |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22458521 |
aatcttcttttgttgaagtgtatgaaatgaaaggtttggctgaacaacaatctttggagttgttcaataagaagacattccacgacttaaacggacgttg |
22458422 |
T |
|
| Q |
108 |
tccagaaaatcttattgatatatcttttaaaattgttgaaaaatgcaatggattgccactagcaattgtactcattggtggtattttatcttgcaaagat |
207 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22458421 |
tccagaaaatcttattgatatatcttttaaaattgttgaaaaatgcaatggattgccactagcaattgtactcattggtggtattttatcttgcaaagat |
22458322 |
T |
|
| Q |
208 |
agaaatacatcagaatggtataagtttagtgaaaatctaaatatagagttaaaagaagatttgaagatnnnnnnnnttgtaggtctcggttaccatgatc |
307 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
22458321 |
agaaatacatcagaatggtataagtttagtgaaaatctaaatatagagttaaaagaagatttgaagataaaaaaaattgtaggtctcggttaccatgatc |
22458222 |
T |
|
| Q |
308 |
tgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatggctgacgg |
407 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || |
|
|
| T |
22458221 |
tgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatactgattcggcaatggatggctgaagg |
22458122 |
T |
|
| Q |
408 |
attcgtgaaagatgatatggtaaaaacattggaagatgctgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagt |
507 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22458121 |
atttgtgaaagatgatatggtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagt |
22458022 |
T |
|
| Q |
508 |
attgatggaagagccaaaacttgttgtgttcatgatctagtccatgcattgatccttcaaaaatg |
572 |
Q |
| |
|
|||||||||||||| |||| |||||||||||||||||| || ||||||||||||||| ||||||| |
|
|
| T |
22458021 |
attgatggaagagcaaaaagttgttgtgttcatgatctggtgcatgcattgatccttgaaaaatg |
22457957 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 505; E-Value: 0
Query Start/End: Original strand, 8 - 572
Target Start/End: Complemental strand, 22481502 - 22480938
Alignment:
| Q |
8 |
aatcttcttttgttgaagtgtatgaaatgaaaggtttggctgaacaacaatctttggagttgttcaataagaagacattccacgacttaaacggacgttg |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22481502 |
aatcttcttttgttgaagtgtatgaaatgaaaggtttggctgaacaacaatctttggagttgttcaataagaagacattccacgacttaaacggacgttg |
22481403 |
T |
|
| Q |
108 |
tccagaaaatcttattgatatatcttttaaaattgttgaaaaatgcaatggattgccactagcaattgtactcattggtggtattttatcttgcaaagat |
207 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22481402 |
tccagaaaatcttattgatatatcttttaaaattgttgaaaaatgcaatggattgccactagcaattgtactcattggtggtattttatcttgcaaagat |
22481303 |
T |
|
| Q |
208 |
agaaatacatcagaatggtataagtttagtgaaaatctaaatatagagttaaaagaagatttgaagatnnnnnnnnttgtaggtctcggttaccatgatc |
307 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
22481302 |
agaaatacatcagaatggtataagtttagtgaaaatctaaatatagagttaaaagaagatttgaagataaaaaaaattgtaggtctcggttaccatgatc |
22481203 |
T |
|
| Q |
308 |
tgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatggctgacgg |
407 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || |
|
|
| T |
22481202 |
tgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatactgattcggcaatggatggctgaagg |
22481103 |
T |
|
| Q |
408 |
attcgtgaaagatgatatggtaaaaacattggaagatgctgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagt |
507 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22481102 |
atttgtgaaagatgatatggtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagt |
22481003 |
T |
|
| Q |
508 |
attgatggaagagccaaaacttgttgtgttcatgatctagtccatgcattgatccttcaaaaatg |
572 |
Q |
| |
|
|||||||||||||| |||| |||||||||||||||||| || ||||||||||||||| ||||||| |
|
|
| T |
22481002 |
attgatggaagagcaaaaagttgttgtgttcatgatctggtgcatgcattgatccttgaaaaatg |
22480938 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 8 - 570
Target Start/End: Complemental strand, 22358034 - 22357472
Alignment:
| Q |
8 |
aatcttcttttgttgaagtgtatgaaatgaaaggtttggctgaacaacaatctttggagttgttcaataagaagacattccacgacttaaacggacgttg |
107 |
Q |
| |
|
|||||||||||||||||||||||||| | ||||||||| ||| | |||||||||| |||||||||||||||||| ||||||| |||||||| |||||||| |
|
|
| T |
22358034 |
aatcttcttttgttgaagtgtatgaactaaaaggtttgactgtagaacaatcttttgagttgttcaataagaaggcattccatgacttaaatggacgttg |
22357935 |
T |
|
| Q |
108 |
tccagaaaatcttattgatatatcttttaaaattgttgaaaaatgcaatggattgccactagcaattgtactcattggtggtattttatcttgcaaagat |
207 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||| |||||||||| ||||| ||||||||||||||| ||||||||||||||||| || ||||||| |
|
|
| T |
22357934 |
tccagaaaatcttattgatatatcttccaaaattgttaaaaaatgcaaaggattaccactagcaattgtagtcattggtggtattttagctcccaaagat |
22357835 |
T |
|
| Q |
208 |
agaaatacatcagaatggtataagtttagtgaaaatctaaatatagagttaaaagaagatttgaagatnnnnnnnnttgtaggtctcggttaccatgatc |
307 |
Q |
| |
|
| || | || |||||||||||||||||||||||| ||||| ||||||| | ||| ||| | || || |||| | ||||||||||| |
|
|
| T |
22357834 |
aaaattccaatggaatggtataagtttagtgaaaatataaatgcagagttagaggaatattccataataagaaaaattttaggatttagttaccatgatt |
22357735 |
T |
|
| Q |
308 |
tgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatggctgacgg |
407 |
Q |
| |
|
|| ||||| | |||||||||||||| ||||||||||||||||||||||||| | || ||||| | |||| | ||||| ||| |||||||| ||||| || |
|
|
| T |
22357734 |
tgccttactacctcaagtcatgtttcttgtattttggattatatcctgaagactataaagttcattcaaagacattgactcgacaatggattgctgaagg |
22357635 |
T |
|
| Q |
408 |
attcgtgaaagatgatatggtaaaaacattggaagatgctgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagt |
507 |
Q |
| |
|
|| |||||| | || || || ||| ||||||| | |||||| |||||||||| ||| || || |||| ||||||||||||||| |||||| ||| |
|
|
| T |
22357634 |
gtttgtgaaacaatatggggaaagaacgatggaagaggttgcagaaggatatttaaaagagttaatacatagaagtttggtgcaagtagattcaatcagt |
22357535 |
T |
|
| Q |
508 |
attgatggaagagccaaaacttgttgtgttcatgatctagtccatgcattgatccttcaaaaa |
570 |
Q |
| |
|
||||||||||||| ||| |||| |||||||||||||||| |||| | |||||||| ||||| |
|
|
| T |
22357534 |
attgatggaagagtaaaacgttgtcgtgttcatgatctagtgcatgaaatgatccttgaaaaa |
22357472 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 9 - 564
Target Start/End: Complemental strand, 22436665 - 22436107
Alignment:
| Q |
9 |
atcttcttttgttgaagtgtatgaaatgaaaggtttggctgaacaacaatctttggagttgttcaataagaagacattccacgacttaaacggacgttgt |
108 |
Q |
| |
|
|||||||||||||||||| ||||| | ||||||| ||||| || ||||||| || ||||||||||||||| ||||||| |||| | ||| ||||| |
|
|
| T |
22436665 |
atcttcttttgttgaagtacatgaacttcaaggtttaactgaagaaaaatctttagaattgttcaataagaaggcattccataacttgagtggatgttgt |
22436566 |
T |
|
| Q |
109 |
ccagaaaatcttattgatatatcttttaaaattgttgaaaaatgcaatggattgccactagcaattgtactcattggtggtattttatcttgcaaagata |
208 |
Q |
| |
|
||| ||||||||||||||||||||| ||||||||| |||||||||| ||||| || |||||||||||| ||| ||||||| |||||||||||||||||| |
|
|
| T |
22436565 |
ccacaaaatcttattgatatatcttccaaaattgttaaaaaatgcaaaggattacctctagcaattgtagtcactggtggtcttttatcttgcaaagata |
22436466 |
T |
|
| Q |
209 |
gaaatacatcagaatggtataagtttagtgaaaatctaaatatag---agttaaaagaagatttgaagatnnnnnnnnttgtaggtctcggttaccatga |
305 |
Q |
| |
|
||||| | | |||||||| ||||||||||||||| ||||| || ||| ||| ||| ||| | || || |||| | |||||||||| |
|
|
| T |
22436465 |
gaaatcctactgaatggtacaagtttagtgaaaatataaatgcagatcagtcaaatgaatattccataataagaaaaattctaggatttagttaccatga |
22436366 |
T |
|
| Q |
306 |
tctgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatggctgac |
405 |
Q |
| |
|
| || ||||| | |||||||| ||||| ||||||||||||||||||||||||| | |||||||| | |||| | ||||| ||| |||||||| ||||| |
|
|
| T |
22436365 |
tttgccttactacctcaagtcgtgtttcttgtattttggattatatcctgaagactatatagttcgttcaaaaacattgactcgccaatggattgctgaa |
22436266 |
T |
|
| Q |
406 |
ggattcgtgaaagatgatatggtaaaaacattggaagatgctgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaatta |
505 |
Q |
| |
|
|| ||||||||||| || | || || |||||||||||| |||| | |||||||||| ||| ||| ||| |||| |||||||||| ||||||||||| | |
|
|
| T |
22436265 |
gggttcgtgaaagaagagaggggaaggacattggaagatattgcaaaaggatatttaatagagttggtcaatagaagtttggtgcatgtagtttcaataa |
22436166 |
T |
|
| Q |
506 |
gtattgatggaagagccaaaacttgttgtgttcatgatctagtccatgcattgatcctt |
564 |
Q |
| |
|
||||||||||||||| |||| |||| ||||||||||| |||| |||||| |||||||| |
|
|
| T |
22436165 |
gtattgatggaagagtaaaaagttgtcgtgttcatgatttagtgcatgcaatgatcctt |
22436107 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 37 - 570
Target Start/End: Complemental strand, 22442748 - 22442212
Alignment:
| Q |
37 |
aaaggtttggctgaacaacaatctttggagttgttcaataagaagacattccacgacttaaacggacgttgtccagaaaatcttattgatatatctttta |
136 |
Q |
| |
|
||||||||| ||| | ||||||||||||||||||||||||||||| |||| || ||||||||||||||||||||| |||||||||||| |||||||| | |
|
|
| T |
22442748 |
aaaggtttgactgtagaacaatctttggagttgttcaataagaaggcatttcatgacttaaacggacgttgtccaaaaaatcttattggtatatcttcca |
22442649 |
T |
|
| Q |
137 |
aaattgttgaaaaatgcaatggattgccactagcaattgtactcattggtggtattttatcttgcaaagatagaaatacatcagaatggtataagtttag |
236 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| || |||||||||||||||| ||||||||| |||||| |
|
|
| T |
22442648 |
aaattgttgaaaaatgcaatggattaccactagcaattgtagtcattggtggtattttagctcccaaagatagaaatacaattgaatggtatgagtttaa |
22442549 |
T |
|
| Q |
237 |
tgaaaatctaaatatag---agttaaaagaagatttgaagatnnnnnnnnttgtaggtctcggttaccatgatctgtcttacaatctcaagtcatgtttg |
333 |
Q |
| |
|
||||||| ||||| || |||| || ||| ||| | | || |||| ||| ||||||||||| || ||| ||| |||||||||||||| |
|
|
| T |
22442548 |
tgaaaatataaatgcagatcagtttaaggaatattccatagtaagaaaaattttaggactcagttaccatgatttgccttgcaacctcaagtcatgtttc |
22442449 |
T |
|
| Q |
334 |
ttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatggctgacggattcgtgaaagatgatatggtaaaaa |
433 |
Q |
| |
|
|||||||||||||||||||| |||| | | || | | |||| | ||||| ||| |||||||| ||||| || || |||||||| || || || | |
|
|
| T |
22442448 |
ttgtattttggattatatcccgaagactatgaagcttgttcaaagacattgactcgtcaatggatagctgaagggtttgtgaaagaatatggggaaagga |
22442349 |
T |
|
| Q |
434 |
cattggaagatgctgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagtattgatggaagagccaaaacttgttg |
533 |
Q |
| |
|
|||||||| | | |||||| |||||||||| || || ||| ||||| ||||||||||||||||||||| |||||||||||||||| |||| ||| | |
|
|
| T |
22442348 |
cattggaaaaggttgcagaaggatatttaaaagtgttaatctgtagaagtttggtgcaagtagtttcaaccagtattgatggaagagtaaaaagttgccg |
22442249 |
T |
|
| Q |
534 |
tgttcatgatctagtccatgcattgatccttcaaaaa |
570 |
Q |
| |
|
||||||||||||||| |||| | |||||||| ||||| |
|
|
| T |
22442248 |
tgttcatgatctagtgcatgaaatgatccttgaaaaa |
22442212 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 8 - 564
Target Start/End: Complemental strand, 22367959 - 22367400
Alignment:
| Q |
8 |
aatcttcttttgttgaagtgtatgaaatgaaaggtttggctgaacaacaatctttggagttgttcaataagaagacattccacgacttaaacggacgttg |
107 |
Q |
| |
|
|||||||||||||||||||| || || | ||||||| |||| || ||||||| || ||||||||||||||| | ||||| ||||| | |||| ||| |
|
|
| T |
22367959 |
aatcttcttttgttgaagtgcataaacttgaaggtttaagtgaagaaaaatctttagaattgttcaataagaaggcgttccatgacttgagcggatattg |
22367860 |
T |
|
| Q |
108 |
tccagaaaatcttattgatatatcttttaaaattgttgaaaaatgcaatggattgccactagcaattgtactcattggtggtattttatcttgcaaagat |
207 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||| ||||||||||| |
|
|
| T |
22367859 |
tccagaaaatcttattgatatatcttccaaaattgttgaaaaatgcaatggattaccactcgcaattgtagtcattggtggtattttagcttgcaaagat |
22367760 |
T |
|
| Q |
208 |
agaaatacatcagaatggtataagtttagtgaaaatctaaatatag---agttaaaagaagatttgaagatnnnnnnnnttgtaggtctcggttaccatg |
304 |
Q |
| |
|
|| ||| || ||||||| |||||||||||||||| ||||| || ||| ||| ||| ||| | ||| || |||| || ||||||||| |
|
|
| T |
22367759 |
aggaatccaattgaatggtctaagtttagtgaaaatataaatgcagatcagtcaaaggaatattccatgataaaaaaaattctaggacttagttaccatg |
22367660 |
T |
|
| Q |
305 |
atctgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatggctga |
404 |
Q |
| |
|
|| || ||| ||| |||||||||||||| ||||| ||||||||||||||||||| | | |||| | |||||||||||| ||| |||||||| ||||| |
|
|
| T |
22367659 |
atttgccttgcaacctcaagtcatgtttcttgtactttggattatatcctgaagactcaaatgttcgttcaaatatattgactcgtcaatggattgctga |
22367560 |
T |
|
| Q |
405 |
cggattcgtgaaagatgatatggtaaaaacattggaagatgctgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaatt |
504 |
Q |
| |
|
|| || |||||||| || | || || ||||||||||| | |||||| ||| |||||| ||| |||||| ||||| ||||||||| ||||| | || |
|
|
| T |
22367559 |
agggtttgtgaaagaagaaaggggaatgacattggaagaggttgcagaaggacatttaatagagttgatccgtagaagtttggtgcgagtagatgggatc |
22367460 |
T |
|
| Q |
505 |
agtattgatggaagagccaaaacttgttgtgttcatgatctagtccatgcattgatcctt |
564 |
Q |
| |
|
| |||||||||||||| | | ||| |||||||||||||||| |||||| |||||||| |
|
|
| T |
22367459 |
actattgatggaagagtagacagttgccgtgttcatgatctagtgcatgcaatgatcctt |
22367400 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 116 - 564
Target Start/End: Complemental strand, 22635430 - 22634982
Alignment:
| Q |
116 |
atcttattgatatatcttttaaaattgttgaaaaatgcaatggattgccactagcaattgtactcattggtggtattttatcttgcaaagatagaaatac |
215 |
Q |
| |
|
|||||||||||||||||| |||||||| ||||||||||| ||||| || |||||||||||| ||||||||| |||| ||||| ||| ||||||||| | |
|
|
| T |
22635430 |
atcttattgatatatcttccaaaattgtcgaaaaatgcaaaggattacctctagcaattgtagtcattggtgatattctatctcgcacggatagaaattc |
22635331 |
T |
|
| Q |
216 |
atcagaatggtataagtttagtgaaaatctaaatatagagttaaaagaagatttgaagatnnnnnnnnttgtaggtctcggttaccatgatctgtcttac |
315 |
Q |
| |
|
| |||||||| ||||||||||||||| ||||| ||||||| | ||| ||| | ||| || |||| || ||||||||||| || | | | |
|
|
| T |
22635330 |
aatagaatggtcgaagtttagtgaaaatataaatgcagagttagaggaatattccatgataagaaaaattttaggacttagttaccatgatttgccatgc |
22635231 |
T |
|
| Q |
316 |
aatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatggctgacggattcgtga |
415 |
Q |
| |
|
| |||||||||||||| ||||||||||||||||||||||||| | |||||||| | |||| | ||||| ||| |||||||| ||||| || ||||||| |
|
|
| T |
22635230 |
tacctcaagtcatgtttcttgtattttggattatatcctgaagactatatagttcgttcaaaaacattgactcgccaatggattgctgaagggttcgtga |
22635131 |
T |
|
| Q |
416 |
aagatgatatggtaaaaacattggaagatgctgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagtattgatgg |
515 |
Q |
| |
|
|||| || | || || ||||| ||||| | |||||| ||||||||| ||| |||||| |||| ||||||||||||||||||||| |||||||||||| |
|
|
| T |
22635130 |
aagaagacaggggaaggacatttgaagaggttgcagaaggatatttagtagagttgatccatagaagtttggtgcaagtagtttcaactagtattgatgg |
22635031 |
T |
|
| Q |
516 |
aagagccaaaacttgttgtgttcatgatctagtccatgcattgatcctt |
564 |
Q |
| |
|
||||| |||| ||| | |||||||||||||| |||| | |||||||| |
|
|
| T |
22635030 |
aagagtaaaaagttgccgcgttcatgatctagtgcatgaaatgatcctt |
22634982 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 47 - 564
Target Start/End: Complemental strand, 22467944 - 22467427
Alignment:
| Q |
47 |
ctgaacaacaatctttggagttgttcaataagaagacattccacgacttaaacggacgttgtccagaaaatcttattgatatatcttttaaaattgttga |
146 |
Q |
| |
|
||||| |||| || ||||| ||||| || |||||| | ||||| ||||| ||||| |||||||||||||||| |||| ||||||| ||||||||||| |
|
|
| T |
22467944 |
ctgaagaacagtccttggaattgtttaaaaagaaggcgttccatgacttggacggagtttgtccagaaaatctttttgacatatcttccaaaattgttga |
22467845 |
T |
|
| Q |
147 |
aaaatgcaatggattgccactagcaattgtactcattggtggtattttatcttgcaaagatagaaatacatcagaatggtataagtttagtgaaaatcta |
246 |
Q |
| |
|
||| ||||| ||||| || ||||||||||| ||| |||| |||||||||| ||||| |||||||| || ||||||| ||| |||||||||||| || |
|
|
| T |
22467844 |
aaactgcaaaggattacctctagcaattgttgtcaccggtgatattttatctcgcaaaaatagaaatccaattgaatggtctaaatttagtgaaaatata |
22467745 |
T |
|
| Q |
247 |
aatatagagttaaaagaagatttgaagatnnnnnnnnttgtaggtctcggttaccatgatctgtcttacaatctcaagtcatgtttgttgtattttggat |
346 |
Q |
| |
|
||| |||||||| | | | ||| | || || |||| | |||||||| || | ||||||| |||||||||||||| ||||||||||||| |
|
|
| T |
22467744 |
aatgtagagttagagggatattccacaataagaaaaattttaggatttagttaccataatttaccttacaacctcaagtcatgtttcttgtattttggat |
22467645 |
T |
|
| Q |
347 |
tatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatggctgacggattcgtgaaagatgatatggtaaaaacattggaagatgc |
446 |
Q |
| |
|
|||||||||||| | |||||||| | |||| | |||| ||| |||||||| ||||| || || ||||| || || | || | ||||||||||| | |
|
|
| T |
22467644 |
tatatcctgaagactatatagttcattcaaagacgttgactcgccaatggattgctgaagggtttgtgaaggaagacagggggaggacattggaagaggt |
22467545 |
T |
|
| Q |
447 |
tgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagtattgatggaagagccaaaacttgttgtgttcatgatcta |
546 |
Q |
| |
|
||| || |||||||||| ||| |||||| |||| |||||||||||||||||||||| |||||||||||||||| |||| |||| |||||||||||||| |
|
|
| T |
22467544 |
tgctgaaggatatttaatagagttgatccatagaagtttggtgcaagtagtttcaataagtattgatggaagagtaaaaagttgtcgtgttcatgatcta |
22467445 |
T |
|
| Q |
547 |
gtccatgcattgatcctt |
564 |
Q |
| |
|
|| |||||| |||||||| |
|
|
| T |
22467444 |
gtgcatgcaatgatcctt |
22467427 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 47 - 564
Target Start/End: Complemental strand, 22630434 - 22629919
Alignment:
| Q |
47 |
ctgaacaacaatctttggagttgttcaataagaagacattccacgacttaaacggacgttgtccagaaaatcttattgatatatcttttaaaattgttga |
146 |
Q |
| |
|
||||| |||| |||||||| ||||| || ||||| | ||||| ||||| | ||| |||||||||||||||| |||| ||||||| ||||||||||| |
|
|
| T |
22630434 |
ctgaagaacagtctttggaattgtttaaaaagaaagcgttccatgacttggatggattttgtccagaaaatctttttgacatatcttccaaaattgttga |
22630335 |
T |
|
| Q |
147 |
aaaatgcaatggattgccactagcaattgtactcattggtggtattttatcttgcaaagatagaaatacatcagaatggtataagtttagtgaaaatcta |
246 |
Q |
| |
|
||||||||| ||||| || |||||||||||| ||| |||| |||||||||| |||||| ||||||| || ||||||| |||||||||||||||| || |
|
|
| T |
22630334 |
aaaatgcaaaggattacctctagcaattgtagtcaccggtgatattttatctcgcaaagttagaaatccaattgaatggtctaagtttagtgaaaatata |
22630235 |
T |
|
| Q |
247 |
aatatagagttaaaagaagatttgaagatnnnnnnnnttgtaggtctcggttaccatgatctgtcttacaatctcaagtcatgtttgttgtattttggat |
346 |
Q |
| |
|
||| |||||||| | ||| ||| | || | |||| | ||||||||||| | ||||||| |||||||||||||| ||||||||||||| |
|
|
| T |
22630234 |
aatgtagagttagaggaatattccacaataagaaaaaatttaggatttagttaccatgatttaccttacaacctcaagtcatgtttcttgtattttggat |
22630135 |
T |
|
| Q |
347 |
tatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatggctgacggattcgtgaaagatgatatggtaaaaacattggaagatgc |
446 |
Q |
| |
|
| |||||||||| | |||||||| | |||| | |||| ||| |||||||| ||||| || || |||||||| | | || || |||||||||||| | |
|
|
| T |
22630134 |
tctatcctgaagactatatagttcgttcaaaggtgttgactcgccaatggatcgctgaagggtttgtgaaagaagtcaagggaagaacattggaagaggt |
22630035 |
T |
|
| Q |
447 |
tgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagtattgatggaagagccaaaacttgttgtgttcatgatcta |
546 |
Q |
| |
|
|| ||| |||||||||| ||| ||| || ||||| ||||||||||||||||||||| ||||| ||||||||| |||| |||| |||| ||||||||| |
|
|
| T |
22630034 |
tggagaaggatatttaatagagttggtccgtagaagtttggtgcaagtagtttcaacaagtat--atggaagagtaaaaagttgtcgtgtacatgatcta |
22629937 |
T |
|
| Q |
547 |
gtccatgcattgatcctt |
564 |
Q |
| |
|
|| |||||| |||||||| |
|
|
| T |
22629936 |
gtgcatgcaatgatcctt |
22629919 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 8 - 249
Target Start/End: Complemental strand, 22431205 - 22430964
Alignment:
| Q |
8 |
aatcttcttttgttgaagtgtatgaaatgaaaggtttggctgaacaacaatctttggagttgttcaataagaagacattccacgacttaaacggacgttg |
107 |
Q |
| |
|
|||||||||||||||||||| ||||| | |||||||| | ||| || ||||||| || |||||||||||||| ||||| ||||| | |||| ||| |
|
|
| T |
22431205 |
aatcttcttttgttgaagtgcatgaacttaaaggtttaaccgaagaaaaatctttagaattgttcaataagaaagtgttccatgacttgagcggatattg |
22431106 |
T |
|
| Q |
108 |
tccagaaaatcttattgatatatcttttaaaattgttgaaaaatgcaatggattgccactagcaattgtactcattggtggtattttatcttgcaaagat |
207 |
Q |
| |
|
||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||| ||||||||||| |
|
|
| T |
22431105 |
tccagaaaatcttatagatatatcttccaaaattgttgaaaaatgcaatggattaccactcgcaattgtagtcattggtggtattttagcttgcaaagat |
22431006 |
T |
|
| Q |
208 |
agaaatacatcagaatggtataagtttagtgaaaatctaaat |
249 |
Q |
| |
|
|| ||| || ||||||| |||||||||||||||| ||||| |
|
|
| T |
22431005 |
aggaatccaattgaatggtctaagtttagtgaaaatataaat |
22430964 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 47 - 564
Target Start/End: Complemental strand, 22353806 - 22353288
Alignment:
| Q |
47 |
ctgaacaacaatctttggagttgttcaataagaagacattccacgacttaaacggacgttgtccagaaaatcttattgatatatcttttaaaattgttga |
146 |
Q |
| |
|
||||| ||||||||||||| ||||| || |||||| | |||| ||||| ||||| ||||||| |||||||| || ||||||||| ||||| |||| |
|
|
| T |
22353806 |
ctgaaaaacaatctttggatttgtttaaaaagaaggcgttccgtgacttggacggattttgtccaaaaaatcttttttatatatcttccgaaattattga |
22353707 |
T |
|
| Q |
147 |
aaaatgcaatggattgccactagcaattgtactcattggtggtattttatcttgcaaagatagaaatacatcagaatggtataagtttagtgaaaatcta |
246 |
Q |
| |
|
||||||||| ||||| || || ||||||||| |||| ||| |||||||||| |||||||||||||| || ||||||| |||||||||||||||| || |
|
|
| T |
22353706 |
aaaatgcaaaggattacctctcgcaattgtagtcataggtaatattttatctcgcaaagatagaaatccaattgaatggtctaagtttagtgaaaatata |
22353607 |
T |
|
| Q |
247 |
aatatagagttaaaagaagatttgaagatnnnnnnnnttgtaggtctcggttaccatgatctgtc-ttacaatctcaagtcatgtttgttgtattttgga |
345 |
Q |
| |
|
||| ||||||| | ||| ||| | || || |||| | ||||||||||| || | |||| | |||||||||||||| |||||||||||| |
|
|
| T |
22353606 |
aatgcagagttagaggaatattccataataagaaaaattttaggatttagttaccatgatttgcctttactacctcaagtcatgtttcttgtattttgga |
22353507 |
T |
|
| Q |
346 |
ttatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatggctgacggattcgtgaaagatgatatggtaaaaacattggaagatg |
445 |
Q |
| |
|
||||||| |||| | |||| | || ||| ||||| ||| |||||||| ||||| || || |||||||| | || || ||| ||||||| | |
|
|
| T |
22353506 |
ttatatctcgaagactacgaagtttattcagatacattgactcgtcaatggattgctgaggggtttgtgaaagaatacgggggaaggacaatggaagagg |
22353407 |
T |
|
| Q |
446 |
ctgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagtattgatggaagagccaaaacttgttgtgttcatgatct |
545 |
Q |
| |
|
|||||| |||||||||| ||| || ||| |||| ||||||||||||||| |||| | |||||||||||||||| |||| |||| ||||||| ||||| |
|
|
| T |
22353406 |
ttgcagaaggatatttaaaagagttaatccatagaagtttggtgcaagtagattcagtcagtattgatggaagagtaaaaagttgtcgtgttcacgatct |
22353307 |
T |
|
| Q |
546 |
agtccatgcattgatcctt |
564 |
Q |
| |
|
||| |||| | |||||||| |
|
|
| T |
22353306 |
agtgcatgaaatgatcctt |
22353288 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 296 - 571
Target Start/End: Complemental strand, 22430914 - 22430639
Alignment:
| Q |
296 |
gttaccatgatctgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatg |
395 |
Q |
| |
|
||||||||||| || ||| ||| |||||||||||||| ||||||||||||||||||||| ||| | ||||||| | |||| | ||| | | | ||||| |
|
|
| T |
22430914 |
gttaccatgatttgccttgcaacctcaagtcatgtttcttgtattttggattatatcctaaagactatatagtttattcaaagacattaacttgtcaatg |
22430815 |
T |
|
| Q |
396 |
gatggctgacggattcgtgaaagatgatatggtaaaaacattggaagatgctgcagatggatatttaacagatttgatcagtagaggtttggtgcaagta |
495 |
Q |
| |
|
||| ||||| || || |||||||| | | || || |||||| |||| | |||||| |||||||||| ||| |||||| |||| |||||||||||||| |
|
|
| T |
22430814 |
gattgctgaagggtttgtgaaagaaaaaacgggaaggacattgaaagaggttgcagaaggatatttaatagagttgatccatagaagtttggtgcaagta |
22430715 |
T |
|
| Q |
496 |
gtttcaattagtattgatggaagagccaaaacttgttgtgttcatgatctagtccatgcattgatccttcaaaaat |
571 |
Q |
| |
|
| |||||| |||||||||||||||| | || |||| |||||||||||||||| |||| | |||||||| |||||| |
|
|
| T |
22430714 |
gattcaataagtattgatggaagagtaagaagttgtcgtgttcatgatctagtgcatgaaatgatccttaaaaaat |
22430639 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 325 - 546
Target Start/End: Complemental strand, 22620599 - 22620378
Alignment:
| Q |
325 |
tcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatggctgacggattcgtgaaagatgata |
424 |
Q |
| |
|
|||||||| |||||||||||||||||||| |||| || || |||| | |||| | |||||||||||||||||| ||||| || || || ||||| || | |
|
|
| T |
22620599 |
tcatgtttattgtattttggattatatccagaagattataaagttgattcaaagagattgattcggcaatggatagctgaagggtttgtaaaagaagaaa |
22620500 |
T |
|
| Q |
425 |
tggtaaaaacattggaagatgctgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagtattgatggaagagccaa |
524 |
Q |
| |
|
|| || || |||||||| | |||||| ||||| |||||||| |||||| |||| |||||||||||||| |||| | || || ||||||| | | || |
|
|
| T |
22620499 |
gggggaatactttggaagaagttgcagaaggatacttaacagagttgatccatagaagtttggtgcaagtatcttcactaagaatcgatggaaaaacaaa |
22620400 |
T |
|
| Q |
525 |
aacttgttgtgttcatgatcta |
546 |
Q |
| |
|
|| |||||| |||||||||||| |
|
|
| T |
22620399 |
aagttgttgcgttcatgatcta |
22620378 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 433 - 564
Target Start/End: Complemental strand, 37930467 - 37930336
Alignment:
| Q |
433 |
acattggaagatgctgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagtattgatggaagagccaaaacttgtt |
532 |
Q |
| |
|
||||||||| | | ||| || |||||||||| ||| || ||| ||||| ||||||||||||||||||||| ||||||||||||||| |||| |||| |
|
|
| T |
37930467 |
acattggaaaaggttgcggaaggatatttaaaagagttaatctgtagaagtttggtgcaagtagtttcaaccggtattgatggaagagtaaaaagttgtc |
37930368 |
T |
|
| Q |
533 |
gtgttcatgatctagtccatgcattgatcctt |
564 |
Q |
| |
|
|||||||||||||||| |||| | |||||||| |
|
|
| T |
37930367 |
gtgttcatgatctagtgcatgaaatgatcctt |
37930336 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 317 - 543
Target Start/End: Complemental strand, 22656777 - 22656551
Alignment:
| Q |
317 |
atctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatggctgacggattcgtgaa |
416 |
Q |
| |
|
|||| |||||||||||||||||||||||| ||||||| |||| || | |||| |||| | | |||| ||||||||||| ||||| || || ||||| |
|
|
| T |
22656777 |
atcttaagtcatgtttgttgtattttggaatatatccagaagattatgaagttgaatcaaagagagtgatacggcaatggatagctgaaggttttgtgaa |
22656678 |
T |
|
| Q |
417 |
agatgatatggtaaaaacattggaagatgctgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagtattgatgga |
516 |
Q |
| |
|
||| || | || ||||| |||||||| | |||||| |||||||||||||| ||||| | || ||||||| |||||| ||| |||| ||||| ||| |
|
|
| T |
22656677 |
agaagaaagggggaaaactttggaagaagttgcagaaggatatttaacagagttgattcgccgatgtttggtacaagtatcctcagttagaattgacgga |
22656578 |
T |
|
| Q |
517 |
agagccaaaacttgttgtgttcatgat |
543 |
Q |
| |
|
| | | |||| ||||||||| |||||| |
|
|
| T |
22656577 |
aaaactaaaagttgttgtgtccatgat |
22656551 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 296 - 546
Target Start/End: Complemental strand, 30989037 - 30988787
Alignment:
| Q |
296 |
gttaccatgatctgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatg |
395 |
Q |
| |
|
||||| ||||| || ||||| |||||||||||| ||||||||||||||| ||||||| |||| || | |||| |||| | ||||||||| ||||| |
|
|
| T |
30989037 |
gttacgatgatttgccttactctctcaagtcatgcttgttgtattttggaatatatccagaagattatgaagttaaatcaaagagattgattcgacaatg |
30988938 |
T |
|
| Q |
396 |
gatggctgacggattcgtgaaagatgatatggtaaaaacattggaagatgctgcagatggatatttaacagatttgatcagtagaggtttggtgcaagta |
495 |
Q |
| |
|
| | ||||| || |||||||| || || | | || || |||||||| | |||||| |||||||||||||| |||||| |||| | |||||||||||| |
|
|
| T |
30988937 |
ggtagctgaagggttcgtgaaggaggaaagagggaagactttggaagacgttgcagaaggatatttaacagagttgatccatagaagcttggtgcaagta |
30988838 |
T |
|
| Q |
496 |
gtttcaattagtattgatggaagagccaaaacttgttgtgttcatgatcta |
546 |
Q |
| |
|
||| |||| ||||||| | ||| ||| |||| |||||||||||||| |
|
|
| T |
30988837 |
tcttcggttagagttgatggtaaagctaaaggttgtcgtgttcatgatcta |
30988787 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 302 - 353
Target Start/End: Original strand, 22180157 - 22180208
Alignment:
| Q |
302 |
atgatctgtcttacaatctcaagtcatgtttgttgtattttggattatatcc |
353 |
Q |
| |
|
||||| || ||||| ||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
22180157 |
atgatttgccttactatctcaagtcatgtttgttgtattttggagtatatcc |
22180208 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 48 - 87
Target Start/End: Complemental strand, 30989297 - 30989258
Alignment:
| Q |
48 |
tgaacaacaatctttggagttgttcaataagaagacattc |
87 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
30989297 |
tgaacaacaatctttggagttgttcaataagaaggcattc |
30989258 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 436 - 545
Target Start/End: Complemental strand, 22647776 - 22647667
Alignment:
| Q |
436 |
ttggaagatgctgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagtattgatggaagagccaaaacttgttgtg |
535 |
Q |
| |
|
|||||||| | |||||| |||||||||| || |||||| |||| ||||||| |||||| |||| |||| |||||||||| | | |||| ||| |||| |
|
|
| T |
22647776 |
ttggaagaagttgcagaacgatatttaactgagttgatccatagaagtttggttcaagtatcttcagttagaattgatggaaaaactaaaagttgctgtg |
22647677 |
T |
|
| Q |
536 |
ttcatgatct |
545 |
Q |
| |
|
|||||||||| |
|
|
| T |
22647676 |
ttcatgatct |
22647667 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 302 - 358
Target Start/End: Original strand, 21937893 - 21937949
Alignment:
| Q |
302 |
atgatctgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaag |
358 |
Q |
| |
|
||||| || ||||| ||||||||||||| ||||||||||||||| ||||||| |||| |
|
|
| T |
21937893 |
atgatttgccttactatctcaagtcatgcttgttgtattttggagtatatccagaag |
21937949 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 302 - 350
Target Start/End: Original strand, 22115825 - 22115873
Alignment:
| Q |
302 |
atgatctgtcttacaatctcaagtcatgtttgttgtattttggattata |
350 |
Q |
| |
|
||||| || ||||| ||||||||||||||||||||||||||||| |||| |
|
|
| T |
22115825 |
atgatttgccttactatctcaagtcatgtttgttgtattttggagtata |
22115873 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 53 - 87
Target Start/End: Original strand, 21930900 - 21930934
Alignment:
| Q |
53 |
aacaatctttggagttgttcaataagaagacattc |
87 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| |
|
|
| T |
21930900 |
aacaatctttggagttgttcaataagaaggcattc |
21930934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 53 - 87
Target Start/End: Original strand, 21937632 - 21937666
Alignment:
| Q |
53 |
aacaatctttggagttgttcaataagaagacattc |
87 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| |
|
|
| T |
21937632 |
aacaatctttggagttgttcaataagaaggcattc |
21937666 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 53 - 87
Target Start/End: Original strand, 22187467 - 22187501
Alignment:
| Q |
53 |
aacaatctttggagttgttcaataagaagacattc |
87 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| |
|
|
| T |
22187467 |
aacaatctttggagttgttcaataagaaggcattc |
22187501 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 104 - 198
Target Start/End: Complemental strand, 22620847 - 22620753
Alignment:
| Q |
104 |
gttgtccagaaaatcttattgatatatcttttaaaattgttgaaaaatgcaatggattgccactagcaattgtactcattggtggtattttatct |
198 |
Q |
| |
|
|||||||| || |||| ||||||||||||| |||||| | ||||||||| || || ||||||||||||||| | |||||||| |||||||| |
|
|
| T |
22620847 |
gttgtccaaaagatctaattgatatatcttccgaaattgctagaaaatgcaagggtttaccactagcaattgtagccgttggtggtcttttatct |
22620753 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 302 - 358
Target Start/End: Original strand, 22028740 - 22028796
Alignment:
| Q |
302 |
atgatctgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaag |
358 |
Q |
| |
|
||||| || ||||| |||||||| |||| ||||||||||||||| ||||||| |||| |
|
|
| T |
22028740 |
atgatttgccttactatctcaagccatgcttgttgtattttggagtatatccagaag |
22028796 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 302 - 358
Target Start/End: Original strand, 22035257 - 22035313
Alignment:
| Q |
302 |
atgatctgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaag |
358 |
Q |
| |
|
||||| || ||||| |||||||| |||| ||||||||||||||| ||||||| |||| |
|
|
| T |
22035257 |
atgatttgccttactatctcaagccatgcttgttgtattttggagtatatccagaag |
22035313 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 302 - 358
Target Start/End: Original strand, 22053446 - 22053502
Alignment:
| Q |
302 |
atgatctgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaag |
358 |
Q |
| |
|
||||| || ||||| ||||| ||||||| ||||||||||||||| ||||||| |||| |
|
|
| T |
22053446 |
atgatttgccttactatctcgagtcatgcttgttgtattttggagtatatccagaag |
22053502 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 302 - 358
Target Start/End: Original strand, 22105448 - 22105504
Alignment:
| Q |
302 |
atgatctgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaag |
358 |
Q |
| |
|
||||| || ||||| ||||||||||||| |||||||| |||||| ||||||| |||| |
|
|
| T |
22105448 |
atgatttgccttactatctcaagtcatgcttgttgtactttggagtatatccagaag |
22105504 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 302 - 358
Target Start/End: Original strand, 22187728 - 22187784
Alignment:
| Q |
302 |
atgatctgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaag |
358 |
Q |
| |
|
||||| || ||||| |||||||| |||| ||||||||||||||| ||||||| |||| |
|
|
| T |
22187728 |
atgatttgccttactatctcaagccatgcttgttgtattttggagtatatccagaag |
22187784 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 104 - 176
Target Start/End: Complemental strand, 22615204 - 22615132
Alignment:
| Q |
104 |
gttgtccagaaaatcttattgatatatcttttaaaattgttgaaaaatgcaatggattgccactagcaattgt |
176 |
Q |
| |
|
|||||||| || | || ||||||||||||| | | |||||| |||||||||| || || |||||||||||||| |
|
|
| T |
22615204 |
gttgtccaaaagagctcattgatatatcttatgatattgttaaaaaatgcaaaggtttaccactagcaattgt |
22615132 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 38; Significance: 0.000000000003; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 436 - 545
Target Start/End: Complemental strand, 2305078 - 2304969
Alignment:
| Q |
436 |
ttggaagatgctgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagtattgatggaagagccaaaacttgttgtg |
535 |
Q |
| |
|
|||||||| | |||||| ||||||||| |||| ||||| || || |||||||||||||| ||| |||| |||||||||| | | |||| |||||||| |
|
|
| T |
2305078 |
ttggaagaagttgcagaaggatatttatcagagttgattcgtcgaagtttggtgcaagtatcctcagttagcattgatggaaaatctaaaagttgttgtg |
2304979 |
T |
|
| Q |
536 |
ttcatgatct |
545 |
Q |
| |
|
|||||||||| |
|
|
| T |
2304978 |
ttcatgatct |
2304969 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 436 - 545
Target Start/End: Original strand, 34976245 - 34976354
Alignment:
| Q |
436 |
ttggaagatgctgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagtattgatggaagagcc-aaaacttgttgt |
534 |
Q |
| |
|
|||||||| | |||| | |||||||||||||| ||||| || || |||||||||||||| ||| |||| |||||||||| |||| |||| ||||||| |
|
|
| T |
34976245 |
ttggaagaagttgcaaaaggatatttaacagagttgattcgtcgaagtttggtgcaagtatcctcagttagaattgatggaa-agcctaaaagttgttgt |
34976343 |
T |
|
| Q |
535 |
gttcatgatct |
545 |
Q |
| |
|
||||||||||| |
|
|
| T |
34976344 |
gttcatgatct |
34976354 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 436 - 545
Target Start/End: Original strand, 34983356 - 34983465
Alignment:
| Q |
436 |
ttggaagatgctgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagtattgatggaagagcc-aaaacttgttgt |
534 |
Q |
| |
|
|||||||| | |||| | |||||||||||||| ||||| || || |||||||||||||| ||| |||| |||||||||| |||| |||| ||||||| |
|
|
| T |
34983356 |
ttggaagaagttgcaaaaggatatttaacagagttgattcgtcgaagtttggtgcaagtatcctcagttagaattgatggaa-agcctaaaagttgttgt |
34983454 |
T |
|
| Q |
535 |
gttcatgatct |
545 |
Q |
| |
|
||||||||||| |
|
|
| T |
34983455 |
gttcatgatct |
34983465 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 455 - 545
Target Start/End: Original strand, 34990110 - 34990200
Alignment:
| Q |
455 |
gatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagtattgatggaagagccaaaacttgttgtgttcatgatct |
545 |
Q |
| |
|
||||||||||||| ||||| ||||| |||||||||||||| ||| |||| |||||||||| | | | || |||||||||||||||||| |
|
|
| T |
34990110 |
gatatttaacagagttgattcgtagaagtttggtgcaagtatcctcagttagcattgatggaaaaactagaagttgttgtgttcatgatct |
34990200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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