View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2228_low_1 (Length: 1021)

Name: NF2228_low_1
Description: NF2228
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2228_low_1
NF2228_low_1
[»] chr2 (29 HSPs)
chr2 (208-1003)||(32706305-32707096)
chr2 (933-1003)||(32718581-32718651)
chr2 (933-1003)||(32724986-32725056)
chr2 (779-832)||(12734929-12734982)
chr2 (779-811)||(14530530-14530562)
chr2 (779-823)||(28960211-28960255)
chr2 (530-582)||(32749254-32749306)
chr2 (779-809)||(8197541-8197571)
chr2 (779-809)||(8202301-8202331)
chr2 (778-832)||(12474926-12474980)
chr2 (779-832)||(227418-227471)
chr2 (779-832)||(1404161-1404214)
chr2 (778-811)||(2073306-2073339)
chr2 (779-832)||(3635323-3635376)
chr2 (779-832)||(4807824-4807877)
chr2 (779-832)||(9531600-9531653)
chr2 (779-832)||(9556369-9556422)
chr2 (779-832)||(12520062-12520115)
chr2 (778-819)||(13474213-13474254)
chr2 (779-832)||(17670697-17670750)
chr2 (779-832)||(25834907-25834960)
chr2 (779-832)||(28508907-28508960)
chr2 (779-832)||(30306261-30306314)
chr2 (782-811)||(35715856-35715885)
chr2 (779-832)||(38328370-38328423)
chr2 (779-832)||(38435181-38435234)
chr2 (778-811)||(38452685-38452718)
chr2 (779-832)||(41763043-41763096)
chr2 (779-832)||(43573130-43573183)
[»] chr5 (18 HSPs)
chr5 (92-487)||(3001615-3002011)
chr5 (621-868)||(3000932-3001177)
chr5 (928-994)||(2999682-2999748)
chr5 (506-580)||(3001217-3001291)
chr5 (7-76)||(16895055-16895126)
chr5 (928-975)||(7432420-7432467)
chr5 (866-912)||(3000803-3000849)
chr5 (779-832)||(12492384-12492437)
chr5 (778-832)||(3302073-3302127)
chr5 (779-832)||(408494-408547)
chr5 (779-832)||(4496613-4496666)
chr5 (778-811)||(10124387-10124420)
chr5 (778-811)||(10989084-10989117)
chr5 (779-832)||(14665941-14665994)
chr5 (778-811)||(16913881-16913914)
chr5 (779-832)||(28976859-28976912)
chr5 (779-832)||(29816611-29816664)
chr5 (778-811)||(32489296-32489329)
[»] chr6 (10 HSPs)
chr6 (928-1003)||(14903439-14903514)
chr6 (779-832)||(579647-579700)
chr6 (778-832)||(5096063-5096117)
chr6 (778-832)||(9706999-9707053)
chr6 (778-832)||(34934829-34934883)
chr6 (779-832)||(12890804-12890857)
chr6 (779-832)||(28085605-28085658)
chr6 (779-832)||(31819060-31819113)
chr6 (779-832)||(34143765-34143818)
chr6 (779-832)||(34156381-34156434)
[»] chr3 (19 HSPs)
chr3 (778-823)||(48712074-48712119)
chr3 (779-832)||(25191606-25191659)
chr3 (779-834)||(52139027-52139082)
chr3 (778-832)||(31566160-31566214)
chr3 (778-832)||(40106619-40106673)
chr3 (779-832)||(22301-22354)
chr3 (779-832)||(311309-311362)
chr3 (779-832)||(2133612-2133665)
chr3 (779-832)||(5169061-5169114)
chr3 (779-832)||(12096705-12096758)
chr3 (778-811)||(15296157-15296190)
chr3 (778-811)||(27192473-27192506)
chr3 (779-832)||(31146928-31146981)
chr3 (778-811)||(43396081-43396114)
chr3 (778-811)||(45289090-45289123)
chr3 (778-811)||(45933375-45933408)
chr3 (779-832)||(48508464-48508517)
chr3 (779-832)||(53262370-53262423)
chr3 (779-832)||(54128608-54128661)
[»] scaffold0041 (1 HSPs)
scaffold0041 (778-832)||(16807-16861)
[»] chr4 (17 HSPs)
chr4 (779-832)||(6957827-6957880)
chr4 (779-832)||(43434153-43434206)
chr4 (779-823)||(32339797-32339841)
chr4 (779-832)||(436458-436511)
chr4 (780-809)||(4548274-4548303)
chr4 (779-832)||(21528517-21528570)
chr4 (778-811)||(23906296-23906329)
chr4 (779-832)||(30634106-30634159)
chr4 (779-832)||(31959814-31959867)
chr4 (778-811)||(38789622-38789655)
chr4 (778-811)||(48622542-48622575)
chr4 (778-811)||(49416957-49416990)
chr4 (779-832)||(50238615-50238668)
chr4 (779-832)||(50238701-50238754)
chr4 (778-811)||(50471777-50471810)
chr4 (779-832)||(52569515-52569568)
chr4 (779-832)||(55007975-55008028)
[»] chr1 (25 HSPs)
chr1 (779-832)||(3777260-3777313)
chr1 (779-832)||(6025834-6025887)
chr1 (779-811)||(22930643-22930675)
chr1 (779-811)||(31274401-31274433)
chr1 (779-811)||(43898459-43898491)
chr1 (778-812)||(36339803-36339837)
chr1 (782-832)||(39140744-39140794)
chr1 (778-832)||(49347392-49347446)
chr1 (778-832)||(52921309-52921363)
chr1 (779-832)||(696499-696552)
chr1 (779-832)||(1210974-1211027)
chr1 (779-832)||(25979231-25979284)
chr1 (779-832)||(29577481-29577534)
chr1 (778-811)||(29975449-29975482)
chr1 (779-832)||(30202130-30202183)
chr1 (779-832)||(32079177-32079230)
chr1 (779-832)||(34444585-34444638)
chr1 (778-811)||(40568409-40568442)
chr1 (779-832)||(41560458-41560511)
chr1 (778-811)||(42337806-42337839)
chr1 (778-811)||(43028807-43028840)
chr1 (779-832)||(43481798-43481851)
chr1 (779-832)||(44941776-44941829)
chr1 (779-832)||(50636310-50636363)
chr1 (779-832)||(50846791-50846844)
[»] chr8 (15 HSPs)
chr8 (779-811)||(35643608-35643640)
chr8 (930-974)||(39851723-39851767)
chr8 (778-832)||(44529454-44529508)
chr8 (778-832)||(45419464-45419518)
chr8 (782-811)||(1313814-1313843)
chr8 (779-832)||(1928587-1928640)
chr8 (771-832)||(4955420-4955481)
chr8 (779-832)||(10668497-10668550)
chr8 (779-832)||(11523723-11523776)
chr8 (778-823)||(12611735-12611780)
chr8 (779-832)||(14742082-14742135)
chr8 (779-832)||(25473403-25473456)
chr8 (778-807)||(29520903-29520932)
chr8 (779-832)||(32276914-32276967)
chr8 (779-832)||(36545378-36545431)
[»] chr7 (22 HSPs)
chr7 (779-823)||(12966254-12966298)
chr7 (778-832)||(33732061-33732115)
chr7 (782-832)||(40149016-40149066)
chr7 (778-832)||(40979927-40979981)
chr7 (778-832)||(48919341-48919395)
chr7 (779-832)||(1011275-1011328)
chr7 (779-832)||(2885722-2885775)
chr7 (779-832)||(5418303-5418356)
chr7 (779-832)||(11594189-11594242)
chr7 (779-832)||(12841275-12841328)
chr7 (779-832)||(22349849-22349902)
chr7 (779-832)||(27649009-27649062)
chr7 (779-832)||(28208328-28208381)
chr7 (779-832)||(29650613-29650666)
chr7 (779-832)||(31005434-31005487)
chr7 (779-832)||(31682602-31682655)
chr7 (779-832)||(31869102-31869155)
chr7 (779-832)||(32631793-32631846)
chr7 (779-832)||(33073158-33073211)
chr7 (779-832)||(36101777-36101830)
chr7 (779-832)||(37618174-37618227)
chr7 (779-832)||(39906372-39906425)
[»] scaffold0168 (1 HSPs)
scaffold0168 (779-832)||(28889-28942)
[»] scaffold0018 (1 HSPs)
scaffold0018 (779-832)||(31697-31750)


Alignment Details
Target: chr2 (Bit Score: 751; Significance: 0; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 751; E-Value: 0
Query Start/End: Original strand, 208 - 1003
Target Start/End: Complemental strand, 32707096 - 32706305
Alignment:
Q  208 atatcaatcattatattgtacagcagcagatgtcaaagcacattatattcatattcataaccaacgcatgctagtaaaatatttccgtagcggcacaatt 307  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32707096 atatcaatcattatattgtgcagcagcagatgtaaaagcacattatattcatattcataaccaacgcatgctagtaaaatatttccgtagcggcacaatt 32706997  T
Q  308 tagacattgcacaaaaaactgcagtagcttacgtattgagaatcttaaaaacagcacttcattttccaaaatgaggcaacaccatgcttaaagggatatc 407  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32706996 tagacattgcacaaaaaactgcagtagcttacgtattgagaatcttaaaaacagcacttcattttccaaaatgaggcaacaccatgcttaaagggatatc 32706897  T
Q  408 tgggatatttggaagtgaaattgatgctccacgcctatagctgctatacctgtgtcttggaaagtagaatttgtaatcgtcgttacctgaaatcgacgca 507  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  32706896 tgggatatttggaagtgaaattgatgcaccacgcctatagctgctatgcctgtgtcttggaaagtagaatttgtaatcgtcgttagctgaaatcgacgca 32706797  T
Q  508 ttctgatataggaaaaagtaatagtgaaaacagcgcagtaacaattttcaatctctacaaacaaagaaatccaaatataataaagaggaaggagctaata 607  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32706796 ttctgatataggaaaaagtaatagtgaaaacagcgcagtaacaattttcaatctctacaaacaaagaaatccaaatataataaagaggaaggagctaata 32706697  T
Q  608 tccactgagctatagaaaattgactaatcatgactgcacataattcatcctataagcctatatcctagcagccatagcagatattcagctaaaatgaaag 707  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32706696 tccactgagctatagaaaattgactaatcatgactgcacataattcatcctataagcctatatcctagcagccatagcagatattcagctaaaatgaaag 32706597  T
Q  708 catattaataaacaaaaggaaaaatcttgccaatcaaaacaggccaacacaactaaaataatattttaagtacaacaacaaccaagcattatcccactaa 807  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32706596 catattaataaacaaaaggaaaaatcttgcatatcaaaacaggccaacacaactaaaataatattttaagtacaacaacaaccaagcattatcccactaa 32706497  T
Q  808 gtggaatcgactacatccatcaaataaaaaataaacactacaacacgcaactcaccacccacaaagcgaacacgcttctcttcttgtataactagtgttg 907  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||    
T  32706496 gtggaatcgactacatccatcaaataaaaaataaacactacaacacgcaactca----ccacaaagcgaacacgcttctcttcttgtataactagtgttg 32706401  T
Q  908 gaaacacgcttctcttcttctattcaatgatttaaatatgtaatgaagctagaaattgcatcaagctagctctctgagttaaataaataatgatct 1003  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32706400 gaaacacgcttctcttcttctattcaatgatttaaatatgtaatgaagctagaaattgcatcaagctagctctctgagttaaataaataatgatct 32706305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 933 - 1003
Target Start/End: Complemental strand, 32718651 - 32718581
Alignment:
Q  933 aatgatttaaatatgtaatgaagctagaaattgcatcaagctagctctctgagttaaataaataatgatct 1003  Q
    ||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||| | ||||||| |||||    
T  32718651 aatgatttaaatatgtaatcaaggtagaaattgcatcaagccagctctctgagttcactaaataacgatct 32718581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 933 - 1003
Target Start/End: Complemental strand, 32725056 - 32724986
Alignment:
Q  933 aatgatttaaatatgtaatgaagctagaaattgcatcaagctagctctctgagttaaataaataatgatct 1003  Q
    ||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||| | ||||||| |||||    
T  32725056 aatgatttaaatatgtaatcaaggtagaaattgcatcaagccagctctctgagttcactaaataacgatct 32724986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 779 - 832
Target Start/End: Complemental strand, 12734982 - 12734929
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||||||||||  ||||||||||  |||||||    
T  12734982 acaacaacaaccaagccttatcccactaagtggggtcgactacatggatcaaat 12734929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 779 - 811
Target Start/End: Complemental strand, 14530562 - 14530530
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtgg 811  Q
    |||||||||||||||||||||||||||||||||    
T  14530562 acaacaacaaccaagcattatcccactaagtgg 14530530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 779 - 823
Target Start/End: Original strand, 28960211 - 28960255
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacat 823  Q
    |||||||||||||||| |||||||||||| |||| ||||||||||    
T  28960211 acaacaacaaccaagccttatcccactaaatggagtcgactacat 28960255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 530 - 582
Target Start/End: Complemental strand, 32749306 - 32749254
Alignment:
Q  530 agtgaaaacagcgcagtaacaattttcaatctctacaaacaaagaaatccaaa 582  Q
    ||||||| ||||  |||| |||||||||||||||||||||| |||||||||||    
T  32749306 agtgaaagcagcatagtaccaattttcaatctctacaaacatagaaatccaaa 32749254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 779 - 809
Target Start/End: Original strand, 8197541 - 8197571
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagt 809  Q
    |||||||||||||||||||||||||||||||    
T  8197541 acaacaacaaccaagcattatcccactaagt 8197571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 779 - 809
Target Start/End: Original strand, 8202301 - 8202331
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagt 809  Q
    |||||||||||||||||||||||||||||||    
T  8202301 acaacaacaaccaagcattatcccactaagt 8202331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 778 - 832
Target Start/End: Original strand, 12474926 - 12474980
Alignment:
Q  778 tacaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    ||||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  12474926 tacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 12474980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Complemental strand, 227471 - 227418
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  227471 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 227418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Original strand, 1404161 - 1404214
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    ||||||| ||||||||||||||||||||| | || ||| |||||| ||||||||    
T  1404161 acaacaataaccaagcattatcccactaaattgagtcggctacattcatcaaat 1404214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 778 - 811
Target Start/End: Original strand, 2073306 - 2073339
Alignment:
Q  778 tacaacaacaaccaagcattatcccactaagtgg 811  Q
    ||||||||||||||||| ||||||||||||||||    
T  2073306 tacaacaacaaccaagccttatcccactaagtgg 2073339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Original strand, 3635323 - 3635376
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  3635323 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 3635376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Complemental strand, 4807877 - 4807824
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  4807877 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 4807824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Original strand, 9531600 - 9531653
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  9531600 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 9531653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Original strand, 9556369 - 9556422
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| | ||||||||||||||| ||| ||||||  |||||||    
T  9556369 acaacaacaaccaagcctcatcccactaagtggagtcggctacatgtatcaaat 9556422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Original strand, 12520062 - 12520115
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  12520062 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 12520115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 778 - 819
Target Start/End: Original strand, 13474213 - 13474254
Alignment:
Q  778 tacaacaacaaccaagcattatcccactaagtggaatcgact 819  Q
    ||||||||||||||||  ||||||||||||||||| ||||||    
T  13474213 tacaacaacaaccaagtcttatcccactaagtggagtcgact 13474254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Complemental strand, 17670750 - 17670697
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  17670750 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 17670697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Complemental strand, 25834960 - 25834907
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  25834960 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 25834907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Complemental strand, 28508960 - 28508907
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  28508960 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 28508907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Complemental strand, 30306314 - 30306261
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  30306314 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 30306261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 782 - 811
Target Start/End: Original strand, 35715856 - 35715885
Alignment:
Q  782 acaacaaccaagcattatcccactaagtgg 811  Q
    ||||||||||||||||||||||||||||||    
T  35715856 acaacaaccaagcattatcccactaagtgg 35715885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Original strand, 38328370 - 38328423
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  38328370 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 38328423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Complemental strand, 38435234 - 38435181
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| |||| ||||||||||| |||| ||||||  |||||||    
T  38435234 acaacaacaaccaagccttatgccactaagtgggatcggctacatggatcaaat 38435181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 778 - 811
Target Start/End: Original strand, 38452685 - 38452718
Alignment:
Q  778 tacaacaacaaccaagcattatcccactaagtgg 811  Q
    ||||||||||||||||| ||||||||||||||||    
T  38452685 tacaacaacaaccaagccttatcccactaagtgg 38452718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Original strand, 41763043 - 41763096
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  41763043 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 41763096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Original strand, 43573130 - 43573183
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  43573130 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 43573183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 310; Significance: 1e-174; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 92 - 487
Target Start/End: Complemental strand, 3002011 - 3001615
Alignment:
Q  92 gataactctgtaaaaacaagtcaat-gtcataaagtttggacaagaaactgcagcaattaccgtttatgcaacctttaaatagtattactatcccattta 190  Q
    ||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  3002011 gataactatgtaaaaacaagtcaaaagtcataaagtttggacaagaaactgcagcaattaccatttatgcaacctttaaatagtattactatcccattta 3001912  T
Q  191 gtacaatatatcattagatatcaatcattatattgtacagcagcagatgtcaaagcacattatattcatattcataaccaacgcatgctagtaaaatatt 290  Q
    ||| |||||||||||| ||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  3001911 gtataatatatcattacata-caatcattatattgtgcagcagcagatgccaaagcacattatattcatattcataaccaacacatgctagtaaaatatt 3001813  T
Q  291 tccgtagcggca-caatttagacattgcacaaaaaactgcagtagcttacgtattgagaatcttaaaaacagcacttcattttccaaaatgaggcaacac 389  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||    
T  3001812 tccgtagtggcaacaatttagacattgcacaaaaaactgcagtagcttacgtattgagcatcttgaaagcagcacttcattttccaaaatgaggcaacac 3001713  T
Q  390 catgcttaaagggatatctgggatatttggaagtgaaattgatgctccacgcctatagctgctatacctgtgtcttggaaagtagaatttgtaatcgt 487  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  3001712 catgcttaaagggatatgtgggatatttggaagtgaaattgatgcaccacgcctatacctgctatacctgtgtcttggagagtagaatttgtaatcgt 3001615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 184; E-Value: 5e-99
Query Start/End: Original strand, 621 - 868
Target Start/End: Complemental strand, 3001177 - 3000932
Alignment:
Q  621 agaaaattgactaatcatgactgcacataattcatcctataagcctatatcctagcagccatagcagatattcagctaaaatgaaagcatattaataaac 720  Q
    ||||||| |||||||| | |||||| |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||||||    
T  3001177 agaaaatagactaatcgtcactgcaaataattcatcctataagcatatatcctagcagccatagcagatcttcagctaaaatgaaaacatattaataaac 3001078  T
Q  721 aaaaggaaaaatcttgccaatcaaaacaggccaacacaactaaaataatattttaagtacaacaacaaccaagcattatcccactaagtggaatcgacta 820  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||  ||| |||    
T  3001077 aaa-ggaaaaatcttgccaatcaaaacaggccaacacaactaaaataatattg-aagtacaacaacaaccaagccttatcccactaagtggggtcggcta 3000980  T
Q  821 catccatcaaataaaaaataaacactacaacacgcaactcaccaccca 868  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  3000979 catccatcaaataaaaaataaacactacaacacgcaactcaccaccca 3000932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 928 - 994
Target Start/End: Complemental strand, 2999748 - 2999682
Alignment:
Q  928 tattcaatgatttaaatatgtaatgaagctagaaattgcatcaagctagctctctgagttaaataaa 994  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2999748 tattcaatgatttaaatatgtaatgaagctagaaattgcatcaagctagctctctgagttaaataaa 2999682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 506 - 580
Target Start/End: Complemental strand, 3001291 - 3001217
Alignment:
Q  506 cattctgatataggaaaaagtaatagtgaaaacagcgcagtaacaattttcaatctctacaaacaaagaaatcca 580  Q
    ||||||| ||||||||||||||| |||||||||||| ||||| ||||||||||| ||||||||||||||||||||    
T  3001291 cattctggtataggaaaaagtaacagtgaaaacagcacagtaccaattttcaatatctacaaacaaagaaatcca 3001217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 7 - 76
Target Start/End: Complemental strand, 16895126 - 16895055
Alignment:
Q  7 tacttttccttttggggaagagaaaacattttagaccc--aatgtgtatactgcatgattcaactgggttta 76  Q
    ||||||||| ||||||||||||||||||||||||||||  ||| ||||||||||||||||||| ||||||||    
T  16895126 tacttttccctttggggaagagaaaacattttagacccataatatgtatactgcatgattcaattgggttta 16895055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 928 - 975
Target Start/End: Complemental strand, 7432467 - 7432420
Alignment:
Q  928 tattcaatgatttaaatatgtaatgaagctagaaattgcatcaagcta 975  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  7432467 tattcaatgatttcaatatgtaatgaagctacaaattgcatcaagcta 7432420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 866 - 912
Target Start/End: Complemental strand, 3000849 - 3000803
Alignment:
Q  866 ccacaaagcgaacacgcttctcttcttgtataactagtgttggaaac 912  Q
    ||||||||||||| ||||||||||||||||||||||||  |||||||    
T  3000849 ccacaaagcgaacgcgcttctcttcttgtataactagttctggaaac 3000803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 779 - 832
Target Start/End: Original strand, 12492384 - 12492437
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||||||||||  ||| |||||| ||||||||    
T  12492384 acaacaacaaccaagccttatcccactaagtggggtcggctacatgcatcaaat 12492437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 778 - 832
Target Start/End: Complemental strand, 3302127 - 3302073
Alignment:
Q  778 tacaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    ||||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  3302127 tacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 3302073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Original strand, 408494 - 408547
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  408494 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 408547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Complemental strand, 4496666 - 4496613
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  4496666 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 4496613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 778 - 811
Target Start/End: Original strand, 10124387 - 10124420
Alignment:
Q  778 tacaacaacaaccaagcattatcccactaagtgg 811  Q
    ||||||||||||||||| ||||||||||||||||    
T  10124387 tacaacaacaaccaagccttatcccactaagtgg 10124420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 778 - 811
Target Start/End: Original strand, 10989084 - 10989117
Alignment:
Q  778 tacaacaacaaccaagcattatcccactaagtgg 811  Q
    ||||||||||||||||| ||||||||||||||||    
T  10989084 tacaacaacaaccaagccttatcccactaagtgg 10989117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Complemental strand, 14665994 - 14665941
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  14665994 acaacaacaaccaagccttatcccactaagtggggtcggctacatagatcaaat 14665941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 778 - 811
Target Start/End: Original strand, 16913881 - 16913914
Alignment:
Q  778 tacaacaacaaccaagcattatcccactaagtgg 811  Q
    ||||||||||||||||| ||||||||||||||||    
T  16913881 tacaacaacaaccaagccttatcccactaagtgg 16913914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Original strand, 28976859 - 28976912
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  28976859 acaacaacaaccaagccttatcccactaagtggggtcggctacatgaatcaaat 28976912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Complemental strand, 29816664 - 29816611
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  29816664 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 29816611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 778 - 811
Target Start/End: Complemental strand, 32489329 - 32489296
Alignment:
Q  778 tacaacaacaaccaagcattatcccactaagtgg 811  Q
    ||||||||||||||||| ||||||||||||||||    
T  32489329 tacaacaacaaccaagccttatcccactaagtgg 32489296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 72; Significance: 3e-32; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 928 - 1003
Target Start/End: Original strand, 14903439 - 14903514
Alignment:
Q  928 tattcaatgatttaaatatgtaatgaagctagaaattgcatcaagctagctctctgagttaaataaataatgatct 1003  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14903439 tattcagtgatttaaatatgtaatgaagctagaaattgcatcaagctagctctctgagttaaataaataatgatct 14903514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 779 - 832
Target Start/End: Complemental strand, 579700 - 579647
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| |||||||||||||||| |||| ||||||  |||||||    
T  579700 acaacaacaaccaagctttatcccactaagtgggatcggctacatagatcaaat 579647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 778 - 832
Target Start/End: Complemental strand, 5096117 - 5096063
Alignment:
Q  778 tacaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    ||||||||||||||| | |||||||||||||||| |||| ||||||  |||||||    
T  5096117 tacaacaacaaccaaaccttatcccactaagtgggatcggctacatagatcaaat 5096063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 778 - 832
Target Start/End: Complemental strand, 9707053 - 9706999
Alignment:
Q  778 tacaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    ||||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  9707053 tacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 9706999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 778 - 832
Target Start/End: Original strand, 34934829 - 34934883
Alignment:
Q  778 tacaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    ||||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  34934829 tacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 34934883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Complemental strand, 12890857 - 12890804
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  12890857 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 12890804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Complemental strand, 28085658 - 28085605
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  28085658 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 28085605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Complemental strand, 31819113 - 31819060
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    ||||| |||||||||||||||||||||||||||  ||| ||||||  |||||||    
T  31819113 acaaccacaaccaagcattatcccactaagtggggtcggctacatggatcaaat 31819060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Original strand, 34143765 - 34143818
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| |||||||| |||||||  ||||||||||  |||||||    
T  34143765 acaacaacaaccaagccttatcccaataagtggggtcgactacatggatcaaat 34143818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Original strand, 34156381 - 34156434
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| |||||||| |||||||  ||||||||||  |||||||    
T  34156381 acaacaacaaccaagccttatcccaataagtggggtcgactacatggatcaaat 34156434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000006; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 778 - 823
Target Start/End: Original strand, 48712074 - 48712119
Alignment:
Q  778 tacaacaacaaccaagcattatcccactaagtggaatcgactacat 823  Q
    |||||||||||||||||||||||||||||||||| ||| |||||||    
T  48712074 tacaacaacaaccaagcattatcccactaagtgggatcaactacat 48712119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 779 - 832
Target Start/End: Complemental strand, 25191659 - 25191606
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    ||||||||||||||||||||||||||||||||| |||  ||||||  |||||||    
T  25191659 acaacaacaaccaagcattatcccactaagtgggatcagctacatggatcaaat 25191606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 779 - 834
Target Start/End: Complemental strand, 52139082 - 52139027
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaataa 834  Q
    |||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||||    
T  52139082 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaataa 52139027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 778 - 832
Target Start/End: Original strand, 31566160 - 31566214
Alignment:
Q  778 tacaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    ||||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  31566160 tacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 31566214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 778 - 832
Target Start/End: Original strand, 40106619 - 40106673
Alignment:
Q  778 tacaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    ||||||||||||||||| ||||||||||||||||  || |||||||  |||||||    
T  40106619 tacaacaacaaccaagccttatcccactaagtggggtccactacattgatcaaat 40106673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Complemental strand, 22354 - 22301
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  22354 acaacaacaaccaagctttatcccactaagtggggtcggctacatagatcaaat 22301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Original strand, 311309 - 311362
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  311309 acaacaacaaccaagccttatcccactaagtggggtcggctacatgtatcaaat 311362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Original strand, 2133612 - 2133665
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||||||||||  |||| |||||  |||||||    
T  2133612 acaacaacaaccaagccttatcccactaagtggggtcgagtacatggatcaaat 2133665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Complemental strand, 5169114 - 5169061
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  5169114 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 5169061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Original strand, 12096705 - 12096758
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  12096705 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 12096758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 778 - 811
Target Start/End: Complemental strand, 15296190 - 15296157
Alignment:
Q  778 tacaacaacaaccaagcattatcccactaagtgg 811  Q
    ||||||||||||||||| ||||||||||||||||    
T  15296190 tacaacaacaaccaagccttatcccactaagtgg 15296157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 778 - 811
Target Start/End: Complemental strand, 27192506 - 27192473
Alignment:
Q  778 tacaacaacaaccaagcattatcccactaagtgg 811  Q
    ||||||||||||||||| ||||||||||||||||    
T  27192506 tacaacaacaaccaagccttatcccactaagtgg 27192473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Complemental strand, 31146981 - 31146928
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||| ||| ||||||||||||||||| ||| ||||||  |||||||    
T  31146981 acaacaacaaccgagccttatcccactaagtggagtcggctacatggatcaaat 31146928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 778 - 811
Target Start/End: Original strand, 43396081 - 43396114
Alignment:
Q  778 tacaacaacaaccaagcattatcccactaagtgg 811  Q
    ||||||||||||||||| ||||||||||||||||    
T  43396081 tacaacaacaaccaagctttatcccactaagtgg 43396114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 778 - 811
Target Start/End: Original strand, 45289090 - 45289123
Alignment:
Q  778 tacaacaacaaccaagcattatcccactaagtgg 811  Q
    ||||||||||||||||| ||||||||||||||||    
T  45289090 tacaacaacaaccaagccttatcccactaagtgg 45289123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 778 - 811
Target Start/End: Complemental strand, 45933408 - 45933375
Alignment:
Q  778 tacaacaacaaccaagcattatcccactaagtgg 811  Q
    ||||||| ||||||||||||||||||||||||||    
T  45933408 tacaacatcaaccaagcattatcccactaagtgg 45933375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Complemental strand, 48508517 - 48508464
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  48508517 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 48508464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Complemental strand, 53262423 - 53262370
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  53262423 acaacaacaaccaagccttatcccactaagtggggtcggctacatagatcaaat 53262370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Complemental strand, 54128661 - 54128608
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  54128661 acaacaacaaccaagccttatcccactaagtggggtcgcctacatggatcaaat 54128608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 778 - 832
Target Start/End: Complemental strand, 16861 - 16807
Alignment:
Q  778 tacaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    ||||||||||||||||| ||||||||||||||||| ||| ||||||  |||||||    
T  16861 tacaacaacaaccaagccttatcccactaagtggagtcggctacatagatcaaat 16807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.000000002; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 779 - 832
Target Start/End: Complemental strand, 6957880 - 6957827
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| |||||||||||||||| |||| ||||||  |||||||    
T  6957880 acaacaacaaccaagccttatcccactaagtgggatcggctacatggatcaaat 6957827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 779 - 832
Target Start/End: Complemental strand, 43434206 - 43434153
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||||||||||  ||||||||||  |||||||    
T  43434206 acaacaacaaccaagccttatcccactaagtgggctcgactacatggatcaaat 43434153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 779 - 823
Target Start/End: Complemental strand, 32339841 - 32339797
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacat 823  Q
    |||||||||||||||| |||||||||||||| |||| ||||||||    
T  32339841 acaacaacaaccaagccttatcccactaagtagaatagactacat 32339797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Complemental strand, 436511 - 436458
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  436511 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 436458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 780 - 809
Target Start/End: Complemental strand, 4548303 - 4548274
Alignment:
Q  780 caacaacaaccaagcattatcccactaagt 809  Q
    ||||||||||||||||||||||||||||||    
T  4548303 caacaacaaccaagcattatcccactaagt 4548274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Complemental strand, 21528570 - 21528517
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  21528570 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 21528517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 778 - 811
Target Start/End: Original strand, 23906296 - 23906329
Alignment:
Q  778 tacaacaacaaccaagcattatcccactaagtgg 811  Q
    ||||||||||||||||| ||||||||||||||||    
T  23906296 tacaacaacaaccaagccttatcccactaagtgg 23906329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Original strand, 30634106 - 30634159
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  30634106 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 30634159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Original strand, 31959814 - 31959867
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  31959814 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 31959867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 778 - 811
Target Start/End: Original strand, 38789622 - 38789655
Alignment:
Q  778 tacaacaacaaccaagcattatcccactaagtgg 811  Q
    ||||||||||||||||| ||||||||||||||||    
T  38789622 tacaacaacaaccaagccttatcccactaagtgg 38789655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 778 - 811
Target Start/End: Original strand, 48622542 - 48622575
Alignment:
Q  778 tacaacaacaaccaagcattatcccactaagtgg 811  Q
    ||||||||||||||||| ||||||||||||||||    
T  48622542 tacaacaacaaccaagccttatcccactaagtgg 48622575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 778 - 811
Target Start/End: Complemental strand, 49416990 - 49416957
Alignment:
Q  778 tacaacaacaaccaagcattatcccactaagtgg 811  Q
    ||||||||||||||||| ||||||||||||||||    
T  49416990 tacaacaacaaccaagccttatcccactaagtgg 49416957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Original strand, 50238615 - 50238668
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  50238615 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 50238668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Original strand, 50238701 - 50238754
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  50238701 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 50238754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 778 - 811
Target Start/End: Complemental strand, 50471810 - 50471777
Alignment:
Q  778 tacaacaacaaccaagcattatcccactaagtgg 811  Q
    ||||||||||||||||| ||||||||||||||||    
T  50471810 tacaacaacaaccaagcgttatcccactaagtgg 50471777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Original strand, 52569515 - 52569568
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  52569515 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 52569568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Complemental strand, 55008028 - 55007975
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  55008028 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 55007975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 34; Significance: 0.000000002; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 779 - 832
Target Start/End: Original strand, 3777260 - 3777313
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    ||||||||||||||||||||||| ||||||||| |||| ||||||  |||||||    
T  3777260 acaacaacaaccaagcattatcctactaagtgggatcggctacatggatcaaat 3777313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 779 - 832
Target Start/End: Complemental strand, 6025887 - 6025834
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||| |||||||||| |||||||||||||||||||||| ||||||  |||||||    
T  6025887 acaaaaacaaccaagtattatcccactaagtggaatcggctacatggatcaaat 6025834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 779 - 811
Target Start/End: Complemental strand, 22930675 - 22930643
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtgg 811  Q
    |||||||||||||||||||||||||||||||||    
T  22930675 acaacaacaaccaagcattatcccactaagtgg 22930643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 779 - 811
Target Start/End: Original strand, 31274401 - 31274433
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtgg 811  Q
    |||||||||||||||||||||||||||||||||    
T  31274401 acaacaacaaccaagcattatcccactaagtgg 31274433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 779 - 811
Target Start/End: Complemental strand, 43898491 - 43898459
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtgg 811  Q
    |||||||||||||||||||||||||||||||||    
T  43898491 acaacaacaaccaagcattatcccactaagtgg 43898459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 778 - 812
Target Start/End: Original strand, 36339803 - 36339837
Alignment:
Q  778 tacaacaacaaccaagcattatcccactaagtgga 812  Q
    |||||||||||||||||||| ||||||||||||||    
T  36339803 tacaacaacaaccaagcattttcccactaagtgga 36339837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 782 - 832
Target Start/End: Complemental strand, 39140794 - 39140744
Alignment:
Q  782 acaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    ||||||||||||||||||||||||||||||  ||| ||||||  |||||||    
T  39140794 acaacaaccaagcattatcccactaagtggggtcggctacatgaatcaaat 39140744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 778 - 832
Target Start/End: Original strand, 49347392 - 49347446
Alignment:
Q  778 tacaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    ||||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  49347392 tacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 49347446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 778 - 832
Target Start/End: Complemental strand, 52921363 - 52921309
Alignment:
Q  778 tacaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    ||||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  52921363 tacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 52921309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Complemental strand, 696552 - 696499
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  696552 acaacaacaaccaagccttatcccactaagtggggtcggctacattgatcaaat 696499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Complemental strand, 1211027 - 1210974
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  1211027 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 1210974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Original strand, 25979231 - 25979284
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  25979231 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 25979284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Complemental strand, 29577534 - 29577481
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  29577534 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 29577481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 778 - 811
Target Start/End: Complemental strand, 29975482 - 29975449
Alignment:
Q  778 tacaacaacaaccaagcattatcccactaagtgg 811  Q
    ||||||||||||||||| ||||||||||||||||    
T  29975482 tacaacaacaaccaagccttatcccactaagtgg 29975449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Original strand, 30202130 - 30202183
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  30202130 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 30202183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Original strand, 32079177 - 32079230
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||| ||||||  ||| ||||||| |||||||    
T  32079177 acaacaacaaccaagccttatcccaccaagtggggtcggctacatcgatcaaat 32079230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Complemental strand, 34444638 - 34444585
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  34444638 acaacaacaaccaagccttatcccactaagtggggtcggctacatagatcaaat 34444585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 778 - 811
Target Start/End: Original strand, 40568409 - 40568442
Alignment:
Q  778 tacaacaacaaccaagcattatcccactaagtgg 811  Q
    ||||||||||||||||| ||||||||||||||||    
T  40568409 tacaacaacaaccaagccttatcccactaagtgg 40568442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Complemental strand, 41560511 - 41560458
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  41560511 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 41560458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 778 - 811
Target Start/End: Complemental strand, 42337839 - 42337806
Alignment:
Q  778 tacaacaacaaccaagcattatcccactaagtgg 811  Q
    ||||||||||||||||| ||||||||||||||||    
T  42337839 tacaacaacaaccaagccttatcccactaagtgg 42337806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 778 - 811
Target Start/End: Original strand, 43028807 - 43028840
Alignment:
Q  778 tacaacaacaaccaagcattatcccactaagtgg 811  Q
    ||||||||||||||||| ||||||||||||||||    
T  43028807 tacaacaacaaccaagccttatcccactaagtgg 43028840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Original strand, 43481798 - 43481851
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  43481798 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 43481851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Original strand, 44941776 - 44941829
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  44941776 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 44941829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Complemental strand, 50636363 - 50636310
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||| ||||| ||||||| |||||| |||||||||||||  |||||||    
T  50636363 acaacaacaatcaagccttatcccgctaagtagaatcgactacattgatcaaat 50636310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Complemental strand, 50846844 - 50846791
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    ||||||||||||||||||| |||||||||||||  ||| ||||||  |||||||    
T  50846844 acaacaacaaccaagcattttcccactaagtggtgtcggctacatagatcaaat 50846791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 33; Significance: 0.000000006; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 779 - 811
Target Start/End: Original strand, 35643608 - 35643640
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtgg 811  Q
    |||||||||||||||||||||||||||||||||    
T  35643608 acaacaacaaccaagcattatcccactaagtgg 35643640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 930 - 974
Target Start/End: Complemental strand, 39851767 - 39851723
Alignment:
Q  930 ttcaatgatttaaatatgtaatgaagctagaaattgcatcaagct 974  Q
    ||||||||||||| ||||||||||||||| ||||| |||||||||    
T  39851767 ttcaatgatttaactatgtaatgaagctaaaaattacatcaagct 39851723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 778 - 832
Target Start/End: Complemental strand, 44529508 - 44529454
Alignment:
Q  778 tacaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    ||||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  44529508 tacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 44529454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 778 - 832
Target Start/End: Complemental strand, 45419518 - 45419464
Alignment:
Q  778 tacaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    ||||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  45419518 tacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 45419464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 782 - 811
Target Start/End: Complemental strand, 1313843 - 1313814
Alignment:
Q  782 acaacaaccaagcattatcccactaagtgg 811  Q
    ||||||||||||||||||||||||||||||    
T  1313843 acaacaaccaagcattatcccactaagtgg 1313814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Original strand, 1928587 - 1928640
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  1928587 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 1928640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 771 - 832
Target Start/End: Complemental strand, 4955481 - 4955420
Alignment:
Q  771 ttttaagtacaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||| ||||||||||||||| | ||||| |||||||||  |||||||||||  |||||||    
T  4955481 ttttaaatacaacaacaaccaaaccttatctcactaagtgagatcgactacataaatcaaat 4955420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Original strand, 10668497 - 10668550
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| |||||||||||||||   ||| ||||||| |||||||    
T  10668497 acaacaacaaccaagccttatcccactaagtgaggtcggctacatcgatcaaat 10668550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Original strand, 11523723 - 11523776
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  11523723 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 11523776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 778 - 823
Target Start/End: Complemental strand, 12611780 - 12611735
Alignment:
Q  778 tacaacaacaaccaagcattatcccactaagtggaatcgactacat 823  Q
    ||||||||||||||||| |||||||||||| ||| |||| ||||||    
T  12611780 tacaacaacaaccaagccttatcccactaattgggatcggctacat 12611735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Original strand, 14742082 - 14742135
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  14742082 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 14742135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Original strand, 25473403 - 25473456
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  25473403 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 25473456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 778 - 807
Target Start/End: Complemental strand, 29520932 - 29520903
Alignment:
Q  778 tacaacaacaaccaagcattatcccactaa 807  Q
    ||||||||||||||||||||||||||||||    
T  29520932 tacaacaacaaccaagcattatcccactaa 29520903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Complemental strand, 32276967 - 32276914
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  32276967 acaacaacaaccaagctttatcccactaagtgggttcgtctacatggatcaaat 32276914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Complemental strand, 36545431 - 36545378
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  36545431 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 36545378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 33; Significance: 0.000000006; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 779 - 823
Target Start/End: Complemental strand, 12966298 - 12966254
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacat 823  Q
    |||||||||||||||| |||||||||||||||| |||| ||||||    
T  12966298 acaacaacaaccaagccttatcccactaagtgggatcggctacat 12966254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 778 - 832
Target Start/End: Complemental strand, 33732115 - 33732061
Alignment:
Q  778 tacaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    ||||||||||||||||| |||||||||||||||| | || ||||||  |||||||    
T  33732115 tacaacaacaaccaagccttatcccactaagtgggaccggctacatggatcaaat 33732061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 782 - 832
Target Start/End: Original strand, 40149016 - 40149066
Alignment:
Q  782 acaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    ||||||||||||| ||||||||||||||||| ||| ||||||  |||||||    
T  40149016 acaacaaccaagccttatcccactaagtggattcggctacatagatcaaat 40149066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 778 - 832
Target Start/End: Original strand, 40979927 - 40979981
Alignment:
Q  778 tacaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    ||||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  40979927 tacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 40979981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 778 - 832
Target Start/End: Complemental strand, 48919395 - 48919341
Alignment:
Q  778 tacaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    ||||||||||||||||| |||||||| |||||||  ||||||||||  |||||||    
T  48919395 tacaacaacaaccaagccttatcccattaagtggggtcgactacatggatcaaat 48919341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Complemental strand, 1011328 - 1011275
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  1011328 acaacaacaaccaagccttatcccactaagtggggtcggctacatagatcaaat 1011275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Original strand, 2885722 - 2885775
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  2885722 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 2885775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Complemental strand, 5418356 - 5418303
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| |||||||||||| |||  ||||||||||  |||||||    
T  5418356 acaacaacaaccaagccttatcccactaaatggggtcgactacatggatcaaat 5418303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Complemental strand, 11594242 - 11594189
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  11594242 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 11594189  T

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Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Original strand, 12841275 - 12841328
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  12841275 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 12841328  T

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Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Complemental strand, 22349902 - 22349849
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||| ||||| ||||||||||||||||  ||||||||||  |||||||    
T  22349902 acaacaacaatcaagccttatcccactaagtggggtcgactacatggatcaaat 22349849  T

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Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Complemental strand, 27649062 - 27649009
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  27649062 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 27649009  T

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Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Original strand, 28208328 - 28208381
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  28208328 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 28208381  T

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Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Complemental strand, 29650666 - 29650613
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  29650666 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 29650613  T

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Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Complemental strand, 31005487 - 31005434
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  31005487 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 31005434  T

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Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Original strand, 31682602 - 31682655
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  31682602 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 31682655  T

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Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Original strand, 31869102 - 31869155
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  31869102 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 31869155  T

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Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Complemental strand, 32631846 - 32631793
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  32631846 acaacaacaaccaagccttatcccactaagtggggtcggctacatagatcaaat 32631793  T

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Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Complemental strand, 33073211 - 33073158
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||| ||||||||||| |||||||||||||||| |||| ||||||  |||||||    
T  33073211 acaataacaaccaagccttatcccactaagtgggatcggctacatggatcaaat 33073158  T

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Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Original strand, 36101777 - 36101830
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||||||||||  || |||||||  |||||||    
T  36101777 acaacaacaaccaagccttatcccactaagtggggtcaactacatggatcaaat 36101830  T

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Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Complemental strand, 37618227 - 37618174
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  37618227 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 37618174  T

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Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Original strand, 39906372 - 39906425
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  39906372 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 39906425  T

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Target: scaffold0168 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Original strand, 28889 - 28942
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  28889 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 28942  T

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Target: scaffold0018 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 779 - 832
Target Start/End: Complemental strand, 31750 - 31697
Alignment:
Q  779 acaacaacaaccaagcattatcccactaagtggaatcgactacatccatcaaat 832  Q
    |||||||||||||||| ||||||||||||||||  ||| ||||||  |||||||    
T  31750 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 31697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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