View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2228_low_27 (Length: 212)
Name: NF2228_low_27
Description: NF2228
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2228_low_27 |
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Alignment Details
Target: chr7 (Bit Score: 176; Significance: 5e-95; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 176; E-Value: 5e-95
Query Start/End: Original strand, 10 - 193
Target Start/End: Complemental strand, 43860954 - 43860771
Alignment:
| Q |
10 |
agtgagatgaatatctatggttgcgtttcaggggtgtgacgcatcggttttgttggagtccactgctggtaacacggcggagaaggatgccattcctaat |
109 |
Q |
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| T |
43860954 |
agtgacatgcatatctatggttgcgtttcaggggtgtgacgcatcggttttgttggagtccactgctggtaacacggcggagaaggatgccattcctaat |
43860855 |
T |
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| Q |
110 |
ttatcattagcaggctttgatgtaatagaagacataaaagaagctttggaggaaaaatgtccaggaattgtttcatgtgctgat |
193 |
Q |
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| T |
43860854 |
ttatcattagcaggctttgatgtaatagaagacataaaagaagctttggaggaaaaatgtccaggaattgtttcatgtgctgat |
43860771 |
T |
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