View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2229_high_12 (Length: 248)
Name: NF2229_high_12
Description: NF2229
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2229_high_12 |
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Alignment Details
Target: chr7 (Bit Score: 156; Significance: 5e-83; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 24 - 233
Target Start/End: Original strand, 32854436 - 32854641
Alignment:
| Q |
24 |
aaagaaagtaatgacaataaattatagttgggtttgaatacacttttagtcggattaatgaaatttctttgcttataaaataaataaaactataagttag |
123 |
Q |
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| T |
32854436 |
aaagaaagtaatgacaataaattatagttgggtttgaatacacttttagtcatattaat-aaatttctttgcttataaaagaaataaaactataagttag |
32854534 |
T |
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| Q |
124 |
tttgatttttatacttggtcttggtggcgttggcatgacaccttaaaatgtgttctccaacttacattcgattaaccttaatgtcatcaattgggaaatt |
223 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||| |||| |
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| T |
32854535 |
tttgattttaatacttggtcttggtggcgttggcatgacaccttaaaatgtgttctccaacttacatttgattattcttaatg---tcaattggggaatt |
32854631 |
T |
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| Q |
224 |
tggatcctct |
233 |
Q |
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|||||||||| |
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| T |
32854632 |
tggatcctct |
32854641 |
T |
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