View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2229_high_15 (Length: 239)
Name: NF2229_high_15
Description: NF2229
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2229_high_15 |
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Alignment Details
Target: chr8 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 4294362 - 4294585
Alignment:
| Q |
1 |
aaaattactcgtatgaaggagagaaagtccacttagaatgaactggtaagtgaaaaccatagatagaaacagaactgctttgtttagctgtgatcattag |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4294362 |
aaaattactcgtatgaaggagagaaagtccacttagaatgaactggtaagtgaaaaccatagatagaaacagaactgctttgtttagctgtgatcattag |
4294461 |
T |
|
| Q |
101 |
tgacaaagaaacaacagaacttcccatgcataaacctcgaagaatcagcagcatcacctccgttctccggcgtcgattgttcttctcgccgtctccgaca |
200 |
Q |
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|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
4294462 |
tgacaaagaaacaacagaacttcccatgcataaacctcgaagaatcagcagcatcacctccgttctccggcgtcgattggtcttctcgccgtctccgaca |
4294561 |
T |
|
| Q |
201 |
agaggaccactcattcttgttgat |
224 |
Q |
| |
|
|||||||||||||||||||||||| |
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|
| T |
4294562 |
agaggaccactcattcttgttgat |
4294585 |
T |
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