View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2229_low_10 (Length: 281)
Name: NF2229_low_10
Description: NF2229
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2229_low_10 |
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Alignment Details
Target: chr8 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 11 - 265
Target Start/End: Original strand, 4294063 - 4294317
Alignment:
| Q |
11 |
cagagaagaaaatgcgagaaaatgaatactggtgaatattcaaattcaattataaagctagtaatcagaaatgaactcaacttttcttttttagaggtga |
110 |
Q |
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| T |
4294063 |
cagaaaagaaaatgcgagaaaatgaatactagtgaatattcaaattcaattataaagctagtaatcagaaatgaactcaacttttcttttttagaggtga |
4294162 |
T |
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| Q |
111 |
actcaaccttttatcaatgaatattttcttaatttccttcacattattctcaacattttattttttgaagcacacactattcacaacataagaaacagtt |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
4294163 |
actcaaccttttatcaatgaatattttcttaatttccttcacattattctcaacattttattttttgaagtacacactattcacaacataagaaacagtt |
4294262 |
T |
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| Q |
211 |
ttttagttagttcagaaacacaacatacattgcttttatttcctccttttctctc |
265 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
4294263 |
ttttagttagttcagaaacacaacatacattgcttttatttcttccttttctctc |
4294317 |
T |
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